Use Of Hepatitis B X-interacting Protein (hbxip) In Modulation Of Apoptosis

  • Published: Jul 1, 2008
  • Earliest Priority: Sep 18 2002
  • Family: 6
  • Cited Works: 31
  • Cited by: 1
  • Cites: 1
  • Sequences: 8
  • Additional Info: Cited Works Full text
Data obtained from: EMBL-EBI Pat NCBI GenBank USPTO Fulltext DDBJ Pat
8 sequences found in this patent (in total)

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Download sequences in fasta format: 2 peptides 6 nucleotides

Displaying 8 sequences

SEQ ID NO
Length
Sequence Type
Locations
Declared organism
Determined organism
Occurrence
Tools
SEQ ID NO
1
Length
429
Sequence Type
nucleotide
Locations
Detailed Description
Declared organism
Homo sapiens
Determined organism
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:197097929
      NM_001132255
      1 of 2 hits reported for Pongo abelii.
    • Hit length
      1,658 bp
    • E Value
      0E0
    • BLAST Score
      793.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      NM_001132255
      25.87% cov
    • Alignment Length
      429 bp
    • CIGAR string
      429M mismatches: 0 - insertions: 0 - deletions: 0
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:304367816
      HM625836
      1 of 10 hits reported for Homo sapiens.
    • Hit length
      779 bp
    • E Value
      0E0
    • BLAST Score
      793.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      HM625836
      55.07% cov
    • Alignment Length
      429 bp
    • CIGAR string
      429M mismatches: 0 - insertions: 0 - deletions: 0
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:61363096
      AY890392
      1 of 7 hits reported for synthetic construct.
    • Hit length
      429 bp
    • E Value
      0E0
    • BLAST Score
      793.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      AY890392
      100% cov
    • Alignment Length
      429 bp
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332849159
      XM_003315753
      1 of 6 hits reported for Pan troglodytes.
    • Hit length
      915 bp
    • E Value
      0E0
    • BLAST Score
      787.8 bits
    • Similarity
      99.77%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XM_003315753
      46.89% cov
    • Alignment Length
      429 bp
Occurrence
93 times in PatSeqDB
Tools
SEQ ID NO
2
Length
142
Sequence Type
peptide
Locations
Detailed Description
Declared organism
Homo sapiens
Determined organism
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:197097930
      NP_001125727
    • Hit length
      142 aa
    • E Value
      3.42E-77
    • BLAST Score
      291.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NP_001125727
      100% cov
    • Alignment Length
      142 aa
    • CIGAR string
      142M mismatches: 0 - insertions: 0 - deletions: 0
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:159795430
      2RAW_A
      1 of 7 hits reported for Homo sapiens.
    • Hit length
      145 aa
    • E Value
      3.65E-77
    • BLAST Score
      291.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      2RAW_A
      97.93% cov
    • Alignment Length
      142 aa
    • CIGAR string
      142M mismatches: 0 - insertions: 0 - deletions: 0
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:60652847
      AAX29118
      1 of 2 hits reported for synthetic construct.
    • Hit length
      143 aa
    • E Value
      3.84E-77
    • BLAST Score
      291.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      AAX29118
      99.3% cov
    • Alignment Length
      142 aa
    • CIGAR string
      142M mismatches: 0 - insertions: 0 - deletions: 0
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:50978646
      NP_001003019
    • Hit length
      142 aa
    • E Value
      7.74E-77
    • BLAST Score
      290.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NP_001003019
      100% cov
    • Alignment Length
      142 aa
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296203315
      XP_002748841
    • Hit length
      142 aa
    • E Value
      5.15E-76
    • BLAST Score
      287.7 bits
    • Similarity
      99.3%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_002748841
      100% cov
    • Alignment Length
      142 aa
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:114670699
      XP_001156931
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      142 aa
    • E Value
      5.64E-76
    • BLAST Score
      287.7 bits
    • Similarity
      99.3%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_001156931
      100% cov
    • Alignment Length
      142 aa
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:109118487
      XP_001108164
      1 of 2 hits reported for Macaca mulatta.
    • Hit length
      142 aa
    • E Value
      2.51E-75
    • BLAST Score
      285.4 bits
    • Similarity
      98.59%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_001108164
      100% cov
    • Alignment Length
      142 aa
  • Macaca fascicularis

    Macaca fascicularis

    • Public DB hit
      GI:67969107
      BAE00908
    • Hit length
      237 aa
    • E Value
      7.68E-75
    • BLAST Score
      283.9 bits
    • Similarity
      97.89%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      BAE00908
      59.92% cov
    • Alignment Length
      142 aa
Occurrence
390 times in PatSeqDB
Tools
SEQ ID NO
3
Length
276
Sequence Type
nucleotide
Locations
Detailed Description
Declared organism
Homo sapiens
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:38788352
      NM_006402
      1 of 9 hits reported for Homo sapiens.
    • Hit length
      855 bp
    • E Value
      1.69E-141
    • BLAST Score
      510.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NM_006402
      32.28% cov
    • Alignment Length
      276 bp
    • CIGAR string
      276M mismatches: 0 - insertions: 0 - deletions: 0
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:313882383
      HQ257924
    • Hit length
      553 bp
    • E Value
      6.1E-141
    • BLAST Score
      508.9 bits
    • Similarity
      100%
    • Coverage
      99.64%
    • Alignment (schematic)

      SEQ ID NO 3
      99.64% cov
      HQ257924
      49.73% cov
    • Alignment Length
      275 bp
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332810065
      XM_513650
      1 of 4 hits reported for Pan troglodytes.
    • Hit length
      1,446 bp
    • E Value
      1.71E-136
    • BLAST Score
      494.2 bits
    • Similarity
      98.91%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XM_513650
      19.09% cov
    • Alignment Length
      276 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297279525
      XM_001101104
      1 of 2 hits reported for Macaca mulatta.
    • Hit length
      835 bp
    • E Value
      1.71E-136
    • BLAST Score
      494.2 bits
    • Similarity
      98.91%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XM_001101104
      33.05% cov
    • Alignment Length
      276 bp
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332237594
      XM_003267943
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      1,397 bp
    • E Value
      7.94E-135
    • BLAST Score
      488.6 bits
    • Similarity
      98.55%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XM_003267943
      19.76% cov
    • Alignment Length
      276 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296208788
      XM_002751205
      1 of 2 hits reported for Callithrix jacchus.
    • Hit length
      868 bp
    • E Value
      7.94E-135
    • BLAST Score
      488.6 bits
    • Similarity
      98.55%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XM_002751205
      31.8% cov
    • Alignment Length
      276 bp
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:284795262
      NM_001034517
      1 of 2 hits reported for Bos taurus.
    • Hit length
      630 bp
    • E Value
      3.75E-123
    • BLAST Score
      449.9 bits
    • Similarity
      96.01%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NM_001034517
      43.81% cov
    • Alignment Length
      276 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297686698
      XM_002820837
      1 of 2 hits reported for Pongo abelii.
    • Hit length
      348 bp
    • E Value
      2.26E-120
    • BLAST Score
      440.6 bits
    • Similarity
      95.65%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XM_002820837
      78.45% cov
    • Alignment Length
      276 bp
Occurrence
5 times in PatSeqDB
Tools
SEQ ID NO
4
Length
91
Sequence Type
peptide
Locations
Detailed Description
Declared organism
Homo sapiens
Determined organism
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296208789
      XP_002751251
    • Hit length
      268 aa
    • E Value
      9.45E-46
    • BLAST Score
      187.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_002751251
      33.96% cov
    • Alignment Length
      91 aa
    • CIGAR string
      91M mismatches: 0 - insertions: 0 - deletions: 0
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:109013421
      XP_001101104
    • Hit length
      169 aa
    • E Value
      1.33E-45
    • BLAST Score
      186.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_001101104
      53.85% cov
    • Alignment Length
      91 aa
    • CIGAR string
      91M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332237595
      XP_003267991
    • Hit length
      173 aa
    • E Value
      1.34E-45
    • BLAST Score
      186.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_003267991
      52.6% cov
    • Alignment Length
      91 aa
    • CIGAR string
      91M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:55587728
      XP_513650
    • Hit length
      173 aa
    • E Value
      1.67E-45
    • BLAST Score
      186.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_513650
      52.6% cov
    • Alignment Length
      91 aa
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:38788353
      NP_006393
      1 of 3 hits reported for Homo sapiens.
    • Hit length
      173 aa
    • E Value
      1.8E-45
    • BLAST Score
      186.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NP_006393
      52.6% cov
    • Alignment Length
      91 aa
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:157823647
      NP_001099932
    • Hit length
      156 aa
    • E Value
      1.86E-45
    • BLAST Score
      186 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NP_001099932
      58.33% cov
    • Alignment Length
      91 aa
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:77735981
      NP_001029689
    • Hit length
      91 aa
    • E Value
      2.31E-45
    • BLAST Score
      186 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NP_001029689
      100% cov
    • Alignment Length
      91 aa
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:51512143
      AAU05316
      1 of 2 hits reported for Sus scrofa.
    • Hit length
      92 aa
    • E Value
      2.8E-45
    • BLAST Score
      185.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      AAU05316
      98.91% cov
    • Alignment Length
      91 aa
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:237820655
      NP_081050
      1 of 3 hits reported for Mus musculus.
    • Hit length
      145 aa
    • E Value
      2.89E-45
    • BLAST Score
      185.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NP_081050
      62.76% cov
    • Alignment Length
      91 aa
  • Monodelphis domestica

    Monodelphis domestica

    • Public DB hit
      GI:126311563
      XP_001381974
    • Hit length
      91 aa
    • E Value
      3.09E-44
    • BLAST Score
      182.2 bits
    • Similarity
      98.9%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_001381974
      100% cov
    • Alignment Length
      91 aa
Occurrence
16 times in PatSeqDB
Tools
SEQ ID NO
5
Length
29
Sequence Type
nucleotide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
Occurrence
5 times in PatSeqDB
Tools
SEQ ID NO
6
Length
29
Sequence Type
nucleotide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
Occurrence
5 times in PatSeqDB
Tools
SEQ ID NO
7
Length
21
Sequence Type
nucleotide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332834370
      XM_003312623
      1 of 4 hits reported for Pan troglodytes.
    • Hit length
      273 bp
    • E Value
      3.98E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      90.48%
    • Alignment (schematic)

      SEQ ID NO 7
      90.48% cov
      XM_003312623
      6.96% cov
    • Alignment Length
      19 bp
    • CIGAR string
      19M2H mismatches: 0 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297664145
      XM_002810467
      1 of 2 hits reported for Pongo abelii.
    • Hit length
      1,457 bp
    • E Value
      3.98E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      90.48%
    • Alignment (schematic)

      SEQ ID NO 7
      90.48% cov
      XM_002810467
      1.3% cov
    • Alignment Length
      19 bp
    • CIGAR string
      19M2H mismatches: 0 - insertions: 0 - deletions: 0
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297301163
      XR_092338
      1 of 4 hits reported for Macaca mulatta.
    • Hit length
      293 bp
    • E Value
      3.98E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      90.48%
    • Alignment (schematic)

      SEQ ID NO 7
      90.48% cov
      XR_092338
      6.48% cov
    • Alignment Length
      19 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296208788
      XM_002751205
      1 of 2 hits reported for Callithrix jacchus.
    • Hit length
      868 bp
    • E Value
      3.98E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      90.48%
    • Alignment (schematic)

      SEQ ID NO 7
      90.48% cov
      XM_002751205
      2.19% cov
    • Alignment Length
      19 bp
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:38788352
      NM_006402
      1 of 9 hits reported for Homo sapiens.
    • Hit length
      855 bp
    • E Value
      3.98E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      90.48%
    • Alignment (schematic)

      SEQ ID NO 7
      90.48% cov
      NM_006402
      2.22% cov
    • Alignment Length
      19 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:313882383
      HQ257924
    • Hit length
      553 bp
    • E Value
      3.98E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      90.48%
    • Alignment (schematic)

      SEQ ID NO 7
      90.48% cov
      HQ257924
      3.44% cov
    • Alignment Length
      19 bp
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:262331559
      NG_013362
      1 of 3 hits reported for Mus musculus.
    • Hit length
      913 bp
    • E Value
      3.98E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      90.48%
    • Alignment (schematic)

      SEQ ID NO 7
      90.48% cov
      NG_013362
      2.08% cov
    • Alignment Length
      19 bp
Occurrence
5 times in PatSeqDB
Tools
SEQ ID NO
8
Length
21
Sequence Type
nucleotide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
Occurrence
5 times in PatSeqDB
Tools

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