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Search for Biological Sequences disclosed in Patents

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Data obtained from: DDBJ Pat NCBI GenBank USPTO Fulltext EMBL-EBI Pat
10 sequences found in this patent (in total)

Displaying 1 - 10 of 10 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
1,865
Type
peptide
Locations
Claims, Detailed Description, Drawings, Summary

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:148612863
      NP_060142
      1 of 3 hits reported for Homo sapiens.
    • Hit length
      1,865 aa
    • E Value
      0E0
    • BLAST Score
      3,905.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      NP_060142
      100% cov
    • Alignment Length
      1,865 aa
    • CIGAR string
      1865M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:114657038
      XP_510400
    • Hit length
      1,865 aa
    • E Value
      0E0
    • BLAST Score
      3,899.7 bits
    • Similarity
      99.95%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XP_510400
      100% cov
    • Alignment Length
      1,865 aa
    • CIGAR string
      920MN416MN527M mismatches: 2 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297696636
      XP_002825490
    • Hit length
      1,866 aa
    • E Value
      0E0
    • BLAST Score
      3,889.3 bits
    • Similarity
      99.79%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XP_002825490
      100% cov
    • Alignment Length
      1,866 aa
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332235549
      XP_003266967
    • Hit length
      1,866 aa
    • E Value
      0E0
    • BLAST Score
      3,879.7 bits
    • Similarity
      99.73%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XP_003266967
      100% cov
    • Alignment Length
      1,866 aa
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:74000116
      XP_535475
      1 of 2 hits reported for Canis lupus familiaris.
    • Hit length
      1,867 aa
    • E Value
      0E0
    • BLAST Score
      3,780.3 bits
    • Similarity
      98.07%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XP_535475
      100% cov
    • Alignment Length
      1,867 aa
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301770089
      XP_002920457
      1 of 2 hits reported for Ailuropoda melanoleuca.
    • Hit length
      1,910 aa
    • E Value
      0E0
    • BLAST Score
      3,770.3 bits
    • Similarity
      98.07%
    • Coverage
      99.95%
    • Alignment (schematic)

      SEQ ID NO 1
      99.95% cov
      XP_002920457
      97.7% cov
    • Alignment Length
      1,866 aa
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:311244743
      XP_003121563
    • Hit length
      1,866 aa
    • E Value
      0E0
    • BLAST Score
      3,769.2 bits
    • Similarity
      97.91%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XP_003121563
      100% cov
    • Alignment Length
      1,866 aa
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:329663922
      NP_001193095
      1 of 2 hits reported for Bos taurus.
    • Hit length
      1,866 aa
    • E Value
      0E0
    • BLAST Score
      3,762.2 bits
    • Similarity
      97.86%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      NP_001193095
      100% cov
    • Alignment Length
      1,866 aa
  • Ovis aries

    Ovis aries

    • Public DB hit
      GI:148236145
      NP_001087254
    • Hit length
      1,866 aa
    • E Value
      0E0
    • BLAST Score
      3,754.5 bits
    • Similarity
      97.8%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      NP_001087254
      100% cov
    • Alignment Length
      1,866 aa
Occurrence
61 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
5,598
Type
nucleotide
Locations
Detailed Description, Drawings

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:13959784
      AY032950
      1 of 3 hits reported for Homo sapiens.
    • Hit length
      7,259 bp
    • E Value
      0E0
    • BLAST Score
      10,338.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      AY032950
      77.12% cov
    • Alignment Length
      5,598 bp
    • CIGAR string
      5598M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332843799
      XM_510400
    • Hit length
      10,377 bp
    • E Value
      0E0
    • BLAST Score
      10,250 bits
    • Similarity
      99.71%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XM_510400
      53.95% cov
    • Alignment Length
      5,598 bp
    • CIGAR string
      392MN107MN965MN17MN584MN245MN8MN197MN238MN390MN383MN62MN412MN564MN476MN167MN375M mismatches: 16 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297696635
      XM_002825444
    • Hit length
      7,202 bp
    • E Value
      0E0
    • BLAST Score
      10,113.4 bits
    • Similarity
      99.27%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XM_002825444
      77.77% cov
    • Alignment Length
      5,601 bp
    • CIGAR string
      110MN281MN53MN53MN272MN23MN143MN35MN50MN54MN442MN268MN72MN167MN167MN26MN83MN8MN131MN65MN116MN782MN113MN98MN240MN13MN38MN47MN30MN278MN15MN76MIM2I16MN53MN18MN388MN102MN91MN461MN81M mismatches: 38 - insertions: 3 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332235548
      XM_003266919
    • Hit length
      10,390 bp
    • E Value
      0E0
    • BLAST Score
      10,096.8 bits
    • Similarity
      99.21%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XM_003266919
      53.91% cov
    • Alignment Length
      5,601 bp
    • CIGAR string
      50MN98MN48MN193MN164MN215MN68MN98MN35MN3MN101MN409MN32MN483MN25MN167MN5MN104MN8MN176MN20MN2MN113MN107MN48MN11MN286MN113MN326MN5MN333MN13MN54MN33MN28MN104MN189MN48MN23M2I2MI92MN583MN454MN88M mismatches: 41 - insertions: 3 - deletions: 0
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:329663921
      NM_001206166
      1 of 2 hits reported for Bos taurus.
    • Hit length
      6,310 bp
    • E Value
      0E0
    • BLAST Score
      8,661.9 bits
    • Similarity
      94.6%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NM_001206166
      88.76% cov
    • Alignment Length
      5,610 bp
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:74000115
      XM_535475
    • Hit length
      7,211 bp
    • E Value
      0E0
    • BLAST Score
      8,610.2 bits
    • Similarity
      94.42%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XM_535475
      77.71% cov
    • Alignment Length
      5,610 bp
  • Ovis aries

    Ovis aries

    • Public DB hit
      GI:148236144
      NM_001093785
      1 of 2 hits reported for Ovis aries.
    • Hit length
      5,601 bp
    • E Value
      0E0
    • BLAST Score
      8,606.5 bits
    • Similarity
      94.42%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NM_001093785
      100% cov
    • Alignment Length
      5,612 bp
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:311244742
      XM_003121515
    • Hit length
      7,163 bp
    • E Value
      0E0
    • BLAST Score
      8,567.7 bits
    • Similarity
      94.3%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XM_003121515
      78.19% cov
    • Alignment Length
      5,611 bp
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:194206662
      XM_001918190
    • Hit length
      5,730 bp
    • E Value
      0E0
    • BLAST Score
      8,551.1 bits
    • Similarity
      94.26%
    • Coverage
      99.95%
    • Alignment (schematic)

      SEQ ID NO 2
      99.95% cov
      XM_001918190
      97.7% cov
    • Alignment Length
      5,613 bp
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301770088
      XM_002920411
    • Hit length
      5,960 bp
    • E Value
      0E0
    • BLAST Score
      8,545.6 bits
    • Similarity
      94.22%
    • Coverage
      99.96%
    • Alignment (schematic)

      SEQ ID NO 2
      99.96% cov
      XM_002920411
      93.99% cov
    • Alignment Length
      5,606 bp
Occurrence
6 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
3
Length
7,259
Type
nucleotide
Locations
Detailed Description, Drawings, Summary

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:13959784
      AY032950
      1 of 3 hits reported for Homo sapiens.
    • Hit length
      7,259 bp
    • E Value
      0E0
    • BLAST Score
      13,376.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      AY032950
      100% cov
    • Alignment Length
      7,259 bp
    • CIGAR string
      7259M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332843799
      XM_510400
    • Hit length
      10,377 bp
    • E Value
      0E0
    • BLAST Score
      13,175.1 bits
    • Similarity
      99.49%
    • Coverage
      99.77%
    • Alignment (schematic)

      SEQ ID NO 3
      99.77% cov
      XM_510400
      69.74% cov
    • Alignment Length
      7,243 bp
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332235548
      XM_003266919
    • Hit length
      10,390 bp
    • E Value
      0E0
    • BLAST Score
      12,929.5 bits
    • Similarity
      98.88%
    • Coverage
      99.74%
    • Alignment (schematic)

      SEQ ID NO 3
      99.74% cov
      XM_003266919
      69.65% cov
    • Alignment Length
      7,244 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297696635
      XM_002825444
    • Hit length
      7,202 bp
    • E Value
      0E0
    • BLAST Score
      12,813.2 bits
    • Similarity
      98.82%
    • Coverage
      99.09%
    • Alignment (schematic)

      SEQ ID NO 3
      99.09% cov
      XM_002825444
      99.78% cov
    • Alignment Length
      7,202 bp
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:74000115
      XM_535475
      1 of 2 hits reported for Canis lupus familiaris.
    • Hit length
      7,211 bp
    • E Value
      0E0
    • BLAST Score
      10,240.8 bits
    • Similarity
      92.31%
    • Coverage
      99.57%
    • Alignment (schematic)

      SEQ ID NO 3
      99.57% cov
      XM_535475
      100% cov
    • Alignment Length
      7,279 bp
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:311244742
      XM_003121515
    • Hit length
      7,163 bp
    • E Value
      0E0
    • BLAST Score
      10,144.8 bits
    • Similarity
      92.26%
    • Coverage
      98.98%
    • Alignment (schematic)

      SEQ ID NO 3
      98.98% cov
      XM_003121515
      99.86% cov
    • Alignment Length
      7,233 bp
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:329663921
      NM_001206166
      1 of 2 hits reported for Bos taurus.
    • Hit length
      6,310 bp
    • E Value
      0E0
    • BLAST Score
      9,459.7 bits
    • Similarity
      93.74%
    • Coverage
      87.06%
    • Alignment (schematic)

      SEQ ID NO 3
      87.06% cov
      NM_001206166
      99.95% cov
    • Alignment Length
      6,346 bp
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301770088
      XM_002920411
    • Hit length
      5,960 bp
    • E Value
      0E0
    • BLAST Score
      8,743.2 bits
    • Similarity
      93.81%
    • Coverage
      80.11%
    • Alignment (schematic)

      SEQ ID NO 3
      80.11% cov
      XM_002920411
      97.63% cov
    • Alignment Length
      5,832 bp
  • Oryctolagus cuniculus

    Oryctolagus cuniculus

    • Public DB hit
      GI:291403014
      XR_085268
    • Hit length
      5,817 bp
    • E Value
      0E0
    • BLAST Score
      8,649 bits
    • Similarity
      93.54%
    • Coverage
      80.05%
    • Alignment (schematic)

      SEQ ID NO 3
      80.05% cov
      XR_085268
      100% cov
    • Alignment Length
      5,834 bp
  • Ovis aries

    Ovis aries

    • Public DB hit
      GI:148236144
      NM_001093785
    • Hit length
      5,601 bp
    • E Value
      0E0
    • BLAST Score
      8,606.5 bits
    • Similarity
      94.42%
    • Coverage
      77.12%
    • Alignment (schematic)

      SEQ ID NO 3
      77.12% cov
      NM_001093785
      100% cov
    • Alignment Length
      5,612 bp
Occurrence
7 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
4
Length
1,863
Type
peptide
Locations
Detailed Description, Drawings, Summary

Declared organism:
Mus musculus

Determined organism:
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:256773285
      NP_067425
      1 of 4 hits reported for Mus musculus.
    • Hit length
      1,863 aa
    • E Value
      0E0
    • BLAST Score
      3,899.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NP_067425
      100% cov
    • Alignment Length
      1,863 aa
    • CIGAR string
      1863M mismatches: 0 - insertions: 0 - deletions: 0
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:293346294
      XP_002726218
      1 of 2 hits reported for Rattus norvegicus.
    • Hit length
      1,862 aa
    • E Value
      0E0
    • BLAST Score
      3,859.7 bits
    • Similarity
      99.52%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_002726218
      100% cov
    • Alignment Length
      1,863 aa
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297696636
      XP_002825490
    • Hit length
      1,866 aa
    • E Value
      0E0
    • BLAST Score
      3,704.1 bits
    • Similarity
      97.37%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_002825490
      100% cov
    • Alignment Length
      1,866 aa
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332235549
      XP_003266967
    • Hit length
      1,866 aa
    • E Value
      0E0
    • BLAST Score
      3,700.6 bits
    • Similarity
      97.32%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_003266967
      100% cov
    • Alignment Length
      1,866 aa
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:74000116
      XP_535475
    • Hit length
      1,867 aa
    • E Value
      0E0
    • BLAST Score
      3,698.7 bits
    • Similarity
      97.32%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_535475
      100% cov
    • Alignment Length
      1,867 aa
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:148612863
      NP_060142
    • Hit length
      1,865 aa
    • E Value
      0E0
    • BLAST Score
      3,694.4 bits
    • Similarity
      97.16%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NP_060142
      100% cov
    • Alignment Length
      1,865 aa
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:311244743
      XP_003121563
    • Hit length
      1,866 aa
    • E Value
      0E0
    • BLAST Score
      3,692.1 bits
    • Similarity
      97.21%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_003121563
      100% cov
    • Alignment Length
      1,866 aa
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301770089
      XP_002920457
      1 of 3 hits reported for Ailuropoda melanoleuca.
    • Hit length
      1,910 aa
    • E Value
      0E0
    • BLAST Score
      3,691 bits
    • Similarity
      97.27%
    • Coverage
      99.95%
    • Alignment (schematic)

      SEQ ID NO 4
      99.95% cov
      XP_002920457
      97.7% cov
    • Alignment Length
      1,866 aa
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:114657038
      XP_510400
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      1,865 aa
    • E Value
      0E0
    • BLAST Score
      3,691 bits
    • Similarity
      97.1%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_510400
      100% cov
    • Alignment Length
      1,865 aa
Occurrence
7 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
5
Length
5,592
Type
nucleotide
Locations
Detailed Description, Drawings

Declared organism:
Mus musculus

Determined organism:
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:256773284
      NM_021450
      1 of 6 hits reported for Mus musculus.
    • Hit length
      7,145 bp
    • E Value
      0E0
    • BLAST Score
      10,327.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NM_021450
      78.26% cov
    • Alignment Length
      5,592 bp
    • CIGAR string
      5592M mismatches: 0 - insertions: 0 - deletions: 0
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:293346293
      XM_002726172
      1 of 2 hits reported for Rattus norvegicus.
    • Hit length
      7,157 bp
    • E Value
      0E0
    • BLAST Score
      9,260.2 bits
    • Similarity
      96.57%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XM_002726172
      78.09% cov
    • Alignment Length
      5,593 bp
    • CIGAR string
      29MN20MN98MN28M2N254MN92MN110MN29MN2MN14MN62MN5MN89MN65MN14MN50MN8MN2MN17MN44MN89MN2MN5MN8MN26MN11MN17MN2MN81MN19MN26MN32MN32MN29MN5MN2MN17MN17MN11MN2MN2MN15MN25MN50MN2MN45MNMN140MN9MN37MN35MN2MN23MN32MN62MN38MN20MN5MN2MN29MN8MN29MN47MN5MN30MN4MN53MN101MN89MN74MN2MN35MN39MN28MN42MNMN11MN32MN5MN41MN80MN47MN8MN8MN89MN50MN65MN26MN3MN91MN5MN65MN8MN38MN8MN30MNMN2MN26MN44MN5MN8MN17MN32MN17MN77MN29MN11MN23MN35MN17MN62MN3MN10MN7MN6MN89MN5MN11MN8MN41MN53MN74MN62MN25MN78MN69MN27MN7M2N7MN13MN2MNM2N4MD3M2D22MN11MN2MN2MN5MNMN12MN24MN58MN2MN54MN4MN35MN14MN2MN47MN59MN48MN6MIMD8MN2MN14MN8MN38MN2MN5MN41MN62MN12MNMN38MN11MN8MN11MN23MN2MN2MN5MN20MN17MN2MN14MN20MN29MN14MN11MN24MN77MN19MN39MN11MN10MN45M mismatches: 187 - insertions: 1 - deletions: 4
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332843799
      XM_510400
    • Hit length
      10,377 bp
    • E Value
      0E0
    • BLAST Score
      7,478.2 bits
    • Similarity
      90.83%
    • Coverage
      99.98%
    • Alignment (schematic)

      SEQ ID NO 5
      99.98% cov
      XM_510400
      53.94% cov
    • Alignment Length
      5,617 bp
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:13959784
      AY032950
      1 of 3 hits reported for Homo sapiens.
    • Hit length
      7,259 bp
    • E Value
      0E0
    • BLAST Score
      7,478.2 bits
    • Similarity
      90.83%
    • Coverage
      99.98%
    • Alignment (schematic)

      SEQ ID NO 5
      99.98% cov
      AY032950
      77.1% cov
    • Alignment Length
      5,617 bp
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332235548
      XM_003266919
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      10,390 bp
    • E Value
      0E0
    • BLAST Score
      7,469 bits
    • Similarity
      90.79%
    • Coverage
      99.98%
    • Alignment (schematic)

      SEQ ID NO 5
      99.98% cov
      XM_003266919
      53.9% cov
    • Alignment Length
      5,616 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297696635
      XM_002825444
      1 of 2 hits reported for Pongo abelii.
    • Hit length
      7,202 bp
    • E Value
      0E0
    • BLAST Score
      7,469 bits
    • Similarity
      90.8%
    • Coverage
      99.98%
    • Alignment (schematic)

      SEQ ID NO 5
      99.98% cov
      XM_002825444
      77.76% cov
    • Alignment Length
      5,617 bp
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:74000115
      XM_535475
    • Hit length
      7,211 bp
    • E Value
      0E0
    • BLAST Score
      7,339.7 bits
    • Similarity
      90.38%
    • Coverage
      99.98%
    • Alignment (schematic)

      SEQ ID NO 5
      99.98% cov
      XM_535475
      77.7% cov
    • Alignment Length
      5,622 bp
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:329663921
      NM_001206166
    • Hit length
      6,310 bp
    • E Value
      0E0
    • BLAST Score
      7,319.4 bits
    • Similarity
      90.32%
    • Coverage
      99.98%
    • Alignment (schematic)

      SEQ ID NO 5
      99.98% cov
      NM_001206166
      88.75% cov
    • Alignment Length
      5,620 bp
Occurrence
6 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
6
Length
7,123
Type
nucleotide
Locations
Detailed Description, Drawings, Summary

Declared organism:
Mus musculus

Determined organism:
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:14009343
      AY032951
      1 of 6 hits reported for Mus musculus.
    • Hit length
      7,123 bp
    • E Value
      0E0
    • BLAST Score
      13,147.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      AY032951
      100% cov
    • Alignment Length
      7,123 bp
    • CIGAR string
      7123M mismatches: 0 - insertions: 0 - deletions: 0
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:293346293
      XM_002726172
      1 of 2 hits reported for Rattus norvegicus.
    • Hit length
      7,157 bp
    • E Value
      0E0
    • BLAST Score
      11,459.6 bits
    • Similarity
      95.77%
    • Coverage
      99.75%
    • Alignment (schematic)

      SEQ ID NO 6
      99.75% cov
      XM_002726172
      99.44% cov
    • Alignment Length
      7,133 bp
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:13959784
      AY032950
      1 of 4 hits reported for Homo sapiens.
    • Hit length
      7,259 bp
    • E Value
      0E0
    • BLAST Score
      7,830.9 bits
    • Similarity
      90.39%
    • Coverage
      83.69%
    • Alignment (schematic)

      SEQ ID NO 6
      83.69% cov
      AY032950
      82.48% cov
    • Alignment Length
      6,012 bp
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332843799
      XM_510400
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      10,377 bp
    • E Value
      0E0
    • BLAST Score
      7,829.1 bits
    • Similarity
      90.38%
    • Coverage
      83.69%
    • Alignment (schematic)

      SEQ ID NO 6
      83.69% cov
      XM_510400
      57.69% cov
    • Alignment Length
      6,011 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297696635
      XM_002825444
    • Hit length
      7,202 bp
    • E Value
      0E0
    • BLAST Score
      7,812.4 bits
    • Similarity
      90.33%
    • Coverage
      83.66%
    • Alignment (schematic)

      SEQ ID NO 6
      83.66% cov
      XM_002825444
      83.13% cov
    • Alignment Length
      6,009 bp
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332235548
      XM_003266919
    • Hit length
      10,390 bp
    • E Value
      0E0
    • BLAST Score
      7,803.2 bits
    • Similarity
      90.77%
    • Coverage
      82.06%
    • Alignment (schematic)

      SEQ ID NO 6
      82.06% cov
      XM_003266919
      56.37% cov
    • Alignment Length
      5,875 bp
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:74000115
      XM_535475
    • Hit length
      7,211 bp
    • E Value
      0E0
    • BLAST Score
      7,696.1 bits
    • Similarity
      90.07%
    • Coverage
      83.43%
    • Alignment (schematic)

      SEQ ID NO 6
      83.43% cov
      XM_535475
      82.68% cov
    • Alignment Length
      5,989 bp
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:329663921
      NM_001206166
    • Hit length
      6,310 bp
    • E Value
      0E0
    • BLAST Score
      7,625.9 bits
    • Similarity
      90.04%
    • Coverage
      82.72%
    • Alignment (schematic)

      SEQ ID NO 6
      82.72% cov
      NM_001206166
      93.69% cov
    • Alignment Length
      5,935 bp
Occurrence
6 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
7
Length
20
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
Occurrence
6 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
8
Length
20
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:297139724
      NG_021363
      1 of 10 hits reported for Homo sapiens.
    • Hit length
      136,662 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NG_021363
      0.01% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332843799
      XM_510400
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      10,377 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XM_510400
      0.19% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332235548
      XM_003266919
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      10,390 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XM_003266919
      0.19% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297696635
      XM_002825444
      1 of 2 hits reported for Pongo abelii.
    • Hit length
      7,202 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XM_002825444
      0.28% cov
    • Alignment Length
      20 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:211970032
      BC169235
    • Hit length
      1,806 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      BC169235
      1.11% cov
    • Alignment Length
      20 bp
Occurrence
6 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
9
Length
10
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
Occurrence
6 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
10
Length
13
Type
peptide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
Occurrence
6 times in PatSeqDB
Tools
PatSeq Finder

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