Method Of Quantifying Membrane Protein By Mass Spectrometry Using Peptide Selection Criteria

Data obtained from: EMBL-EBI Pat NCBI GenBank USPTO Fulltext
1,420 sequences found in this patent (in total)

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Displaying 1 - 10 of 1,420 sequences

SEQ ID NO
Length
Sequence Type
Locations
Declared organism
Determined organism
Occurrence
Tools
SEQ ID NO
1
Length
10
Sequence Type
peptide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
  • Strongylocentrotus purpuratus

    Strongylocentrotus purpuratus

    • Public DB hit
      GI:115613255
      XP_001184791
    • Hit length
      316 aa
    • E Value
      3.46E0
    • BLAST Score
      34.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XP_001184791
      3.16% cov
    • Alignment Length
      10 aa
    • CIGAR string
      10M mismatches: 0 - insertions: 0 - deletions: 0
  • Anolis carolinensis

    Anolis carolinensis

    • Public DB hit
      GI:327273045
      XP_003221293
    • Hit length
      656 aa
    • E Value
      7.62E0
    • BLAST Score
      33.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XP_003221293
      1.52% cov
    • Alignment Length
      10 aa
    • CIGAR string
      10M mismatches: 0 - insertions: 0 - deletions: 0
  • Ornithorhynchus anatinus

    Ornithorhynchus anatinus

    • Public DB hit
      GI:149539576
      XP_001510302
    • Hit length
      654 aa
    • E Value
      7.69E0
    • BLAST Score
      33.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XP_001510302
      1.53% cov
    • Alignment Length
      10 aa
    • CIGAR string
      10M mismatches: 0 - insertions: 0 - deletions: 0
  • Taeniopygia guttata

    Taeniopygia guttata

    • Public DB hit
      GI:224052479
      XP_002198174
      1 of 3 hits reported for Taeniopygia guttata.
    • Hit length
      664 aa
    • E Value
      7.76E0
    • BLAST Score
      33.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XP_002198174
      1.51% cov
    • Alignment Length
      10 aa
  • Monodelphis domestica

    Monodelphis domestica

    • Public DB hit
      GI:126331074
      XP_001370422
      1 of 2 hits reported for Monodelphis domestica.
    • Hit length
      661 aa
    • E Value
      7.76E0
    • BLAST Score
      33.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XP_001370422
      1.51% cov
    • Alignment Length
      10 aa
  • Xenopus (Silurana) tropicalis

    Xenopus (Silurana) tropicalis

    • Public DB hit
      GI:113931558
      NP_001039227
      1 of 2 hits reported for Xenopus (Silurana) tropicalis.
    • Hit length
      661 aa
    • E Value
      8.66E0
    • BLAST Score
      33.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      NP_001039227
      1.51% cov
    • Alignment Length
      10 aa
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:61967936
      AAX56948
      1 of 2 hits reported for Macaca mulatta.
    • Hit length
      655 aa
    • E Value
      8.66E0
    • BLAST Score
      33.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      AAX56948
      1.53% cov
    • Alignment Length
      10 aa
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297673947
      XP_002815003
    • Hit length
      625 aa
    • E Value
      9.07E0
    • BLAST Score
      33.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XP_002815003
      1.6% cov
    • Alignment Length
      10 aa
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332819792
      XP_526633
    • Hit length
      655 aa
    • E Value
      9.15E0
    • BLAST Score
      33.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XP_526633
      1.53% cov
    • Alignment Length
      10 aa
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:4185796
      AAD09188
    • Hit length
      655 aa
    • E Value
      9.15E0
    • BLAST Score
      33.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      AAD09188
      1.53% cov
    • Alignment Length
      10 aa
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296196036
      XP_002745651
    • Hit length
      655 aa
    • E Value
      9.41E0
    • BLAST Score
      32.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XP_002745651
      1.53% cov
    • Alignment Length
      10 aa
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301755564
      XP_002913625
    • Hit length
      649 aa
    • E Value
      9.41E0
    • BLAST Score
      32.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XP_002913625
      1.54% cov
    • Alignment Length
      10 aa
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:6752944
      NP_036050
    • Hit length
      657 aa
    • E Value
      9.41E0
    • BLAST Score
      32.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      NP_036050
      1.52% cov
    • Alignment Length
      10 aa
  • Bubalus bubalis

    Bubalus bubalis

    • Public DB hit
      GI:320117912
      ADW11245
    • Hit length
      658 aa
    • E Value
      9.41E0
    • BLAST Score
      32.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      ADW11245
      1.52% cov
    • Alignment Length
      10 aa
Occurrence
23 times in PatSeqDB
Tools
SEQ ID NO
2
Length
12
Sequence Type
peptide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:62201507
      AAH92408
      1 of 2 hits reported for Homo sapiens.
    • Hit length
      611 aa
    • E Value
      4.27E2
    • BLAST Score
      27.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      AAH92408
      1.96% cov
    • Alignment Length
      12 aa
Occurrence
12 times in PatSeqDB
Tools
SEQ ID NO
3
Length
12
Sequence Type
peptide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
  • Monodelphis domestica

    Monodelphis domestica

    • Public DB hit
      GI:126331074
      XP_001370422
    • Hit length
      661 aa
    • E Value
      4.35E-1
    • BLAST Score
      37.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XP_001370422
      1.82% cov
    • Alignment Length
      12 aa
    • CIGAR string
      12M mismatches: 0 - insertions: 0 - deletions: 0
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:62201507
      AAH92408
      1 of 10 hits reported for Homo sapiens.
    • Hit length
      611 aa
    • E Value
      6.46E-1
    • BLAST Score
      37.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      AAH92408
      1.96% cov
    • Alignment Length
      12 aa
    • CIGAR string
      12M mismatches: 0 - insertions: 0 - deletions: 0
  • Ornithorhynchus anatinus

    Ornithorhynchus anatinus

    • Public DB hit
      GI:149539576
      XP_001510302
    • Hit length
      654 aa
    • E Value
      6.88E-1
    • BLAST Score
      36.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XP_001510302
      1.83% cov
    • Alignment Length
      12 aa
    • CIGAR string
      12M mismatches: 0 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297673947
      XP_002815003
    • Hit length
      625 aa
    • E Value
      7.27E-1
    • BLAST Score
      36.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XP_002815003
      1.92% cov
    • Alignment Length
      12 aa
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332819792
      XP_526633
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      655 aa
    • E Value
      7.55E-1
    • BLAST Score
      36.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XP_526633
      1.83% cov
    • Alignment Length
      12 aa
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332233492
      XP_003265936
    • Hit length
      655 aa
    • E Value
      8.05E-1
    • BLAST Score
      36.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XP_003265936
      1.83% cov
    • Alignment Length
      12 aa
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:61967936
      AAX56948
      1 of 2 hits reported for Macaca mulatta.
    • Hit length
      655 aa
    • E Value
      8.12E-1
    • BLAST Score
      36.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      AAX56948
      1.83% cov
    • Alignment Length
      12 aa
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296196036
      XP_002745651
    • Hit length
      655 aa
    • E Value
      8.5E-1
    • BLAST Score
      36.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XP_002745651
      1.83% cov
    • Alignment Length
      12 aa
Occurrence
12 times in PatSeqDB
Tools
SEQ ID NO
4
Length
10
Sequence Type
peptide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
  • Monodelphis domestica

    Monodelphis domestica

    • Public DB hit
      GI:126331074
      XP_001370422
    • Hit length
      661 aa
    • E Value
      2.47E1
    • BLAST Score
      31.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_001370422
      1.51% cov
    • Alignment Length
      10 aa
    • CIGAR string
      10M mismatches: 0 - insertions: 0 - deletions: 0
  • Ornithorhynchus anatinus

    Ornithorhynchus anatinus

    • Public DB hit
      GI:149539576
      XP_001510302
    • Hit length
      654 aa
    • E Value
      2.83E1
    • BLAST Score
      31.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_001510302
      1.53% cov
    • Alignment Length
      10 aa
    • CIGAR string
      10M mismatches: 0 - insertions: 0 - deletions: 0
  • Xenopus (Silurana) tropicalis

    Xenopus (Silurana) tropicalis

    • Public DB hit
      GI:113931558
      NP_001039227
    • Hit length
      661 aa
    • E Value
      3.05E1
    • BLAST Score
      31.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NP_001039227
      1.51% cov
    • Alignment Length
      10 aa
    • CIGAR string
      10M mismatches: 0 - insertions: 0 - deletions: 0
  • Oryctolagus cuniculus

    Oryctolagus cuniculus

    • Public DB hit
      GI:291401450
      XP_002717012
    • Hit length
      558 aa
    • E Value
      3.08E1
    • BLAST Score
      31.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_002717012
      1.79% cov
    • Alignment Length
      10 aa
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:61967936
      AAX56948
      1 of 2 hits reported for Macaca mulatta.
    • Hit length
      655 aa
    • E Value
      3.28E1
    • BLAST Score
      31.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      AAX56948
      1.53% cov
    • Alignment Length
      10 aa
  • Xenopus laevis

    Xenopus laevis

    • Public DB hit
      GI:147903964
      NP_001091141
    • Hit length
      661 aa
    • E Value
      3.31E1
    • BLAST Score
      31.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NP_001091141
      1.51% cov
    • Alignment Length
      10 aa
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332819792
      XP_526633
    • Hit length
      655 aa
    • E Value
      3.57E1
    • BLAST Score
      31.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_526633
      1.53% cov
    • Alignment Length
      10 aa
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332233492
      XP_003265936
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      655 aa
    • E Value
      3.73E1
    • BLAST Score
      31.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_003265936
      1.53% cov
    • Alignment Length
      10 aa
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297673947
      XP_002815003
      1 of 2 hits reported for Pongo abelii.
    • Hit length
      625 aa
    • E Value
      3.73E1
    • BLAST Score
      31.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_002815003
      1.6% cov
    • Alignment Length
      10 aa
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296196036
      XP_002745651
      1 of 2 hits reported for Callithrix jacchus.
    • Hit length
      655 aa
    • E Value
      3.73E1
    • BLAST Score
      31.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_002745651
      1.53% cov
    • Alignment Length
      10 aa
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:6752944
      NP_036050
      1 of 3 hits reported for Mus musculus.
    • Hit length
      657 aa
    • E Value
      3.73E1
    • BLAST Score
      31.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NP_036050
      1.52% cov
    • Alignment Length
      10 aa
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:4038352
      AAC97367
    • Hit length
      655 aa
    • E Value
      3.77E1
    • BLAST Score
      31.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      AAC97367
      1.53% cov
    • Alignment Length
      10 aa
Occurrence
14 times in PatSeqDB
Tools
SEQ ID NO
5
Length
9
Sequence Type
peptide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:335294103
      XP_003129379
      1 of 4 hits reported for Sus scrofa.
    • Hit length
      656 aa
    • E Value
      4.39E1
    • BLAST Score
      30.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XP_003129379
      1.37% cov
    • Alignment Length
      9 aa
    • CIGAR string
      9M mismatches: 0 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297673947
      XP_002815003
    • Hit length
      625 aa
    • E Value
      4.68E1
    • BLAST Score
      30.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XP_002815003
      1.44% cov
    • Alignment Length
      9 aa
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:63990088
      AAY40902
      1 of 9 hits reported for Homo sapiens.
    • Hit length
      607 aa
    • E Value
      4.76E1
    • BLAST Score
      30.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      AAY40902
      1.48% cov
    • Alignment Length
      9 aa
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:61967936
      AAX56948
      1 of 2 hits reported for Macaca mulatta.
    • Hit length
      655 aa
    • E Value
      4.85E1
    • BLAST Score
      30.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      AAX56948
      1.37% cov
    • Alignment Length
      9 aa
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332233492
      XP_003265936
    • Hit length
      655 aa
    • E Value
      5.22E1
    • BLAST Score
      30.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XP_003265936
      1.37% cov
    • Alignment Length
      9 aa
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332819792
      XP_526633
    • Hit length
      655 aa
    • E Value
      5.27E1
    • BLAST Score
      30.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XP_526633
      1.37% cov
    • Alignment Length
      9 aa
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296196036
      XP_002745651
    • Hit length
      655 aa
    • E Value
      5.57E1
    • BLAST Score
      30.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XP_002745651
      1.37% cov
    • Alignment Length
      9 aa
  • Ovis aries

    Ovis aries

    • Public DB hit
      GI:118403304
      NP_001072125
    • Hit length
      658 aa
    • E Value
      6.28E1
    • BLAST Score
      30.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NP_001072125
      1.37% cov
    • Alignment Length
      9 aa
Occurrence
6 times in PatSeqDB
Tools
SEQ ID NO
6
Length
14
Sequence Type
peptide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:62087520
      BAD92207
      1 of 9 hits reported for Homo sapiens.
    • Hit length
      1,062 aa
    • E Value
      7.62E1
    • BLAST Score
      29.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      BAD92207
      1.32% cov
    • Alignment Length
      14 aa
    • CIGAR string
      14M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:114614336
      XP_001163417
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      1,280 aa
    • E Value
      8.13E1
    • BLAST Score
      29.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XP_001163417
      1.09% cov
    • Alignment Length
      14 aa
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296209782
      XP_002751681
      1 of 2 hits reported for Callithrix jacchus.
    • Hit length
      1,215 aa
    • E Value
      4.57E2
    • BLAST Score
      27.4 bits
    • Similarity
      100%
    • Coverage
      92.86%
    • Alignment (schematic)

      SEQ ID NO 6
      92.86% cov
      XP_002751681
      1.07% cov
    • Alignment Length
      13 aa
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332206611
      XP_003252391
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      1,216 aa
    • E Value
      4.66E2
    • BLAST Score
      27.4 bits
    • Similarity
      100%
    • Coverage
      92.86%
    • Alignment (schematic)

      SEQ ID NO 6
      92.86% cov
      XP_003252391
      1.07% cov
    • Alignment Length
      13 aa
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297681136
      XP_002818322
      1 of 2 hits reported for Pongo abelii.
    • Hit length
      1,279 aa
    • E Value
      4.66E2
    • BLAST Score
      27.4 bits
    • Similarity
      100%
    • Coverage
      92.86%
    • Alignment (schematic)

      SEQ ID NO 6
      92.86% cov
      XP_002818322
      1.02% cov
    • Alignment Length
      13 aa
Occurrence
12 times in PatSeqDB
Tools
SEQ ID NO
7
Length
14
Sequence Type
peptide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:74136329
      NP_001028059
      1 of 3 hits reported for Macaca mulatta.
    • Hit length
      1,283 aa
    • E Value
      1.14E-4
    • BLAST Score
      49.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NP_001028059
      1.09% cov
    • Alignment Length
      14 aa
    • CIGAR string
      14M mismatches: 0 - insertions: 0 - deletions: 0
  • Macaca fascicularis

    Macaca fascicularis

    • Public DB hit
      GI:31442763
      AAN07780
    • Hit length
      1,283 aa
    • E Value
      1.14E-4
    • BLAST Score
      49.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      AAN07780
      1.09% cov
    • Alignment Length
      14 aa
    • CIGAR string
      14M mismatches: 0 - insertions: 0 - deletions: 0
  • Chlorocebus aethiops

    Chlorocebus aethiops

    • Public DB hit
      GI:60326712
      AAX18881
    • Hit length
      1,280 aa
    • E Value
      1.2E-4
    • BLAST Score
      49.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      AAX18881
      1.09% cov
    • Alignment Length
      14 aa
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332206611
      XP_003252391
    • Hit length
      1,216 aa
    • E Value
      1.22E-4
    • BLAST Score
      49.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XP_003252391
      1.15% cov
    • Alignment Length
      14 aa
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:120660210
      AAI30425
      1 of 9 hits reported for Homo sapiens.
    • Hit length
      1,280 aa
    • E Value
      1.22E-4
    • BLAST Score
      49.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      AAI30425
      1.09% cov
    • Alignment Length
      14 aa
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:114614336
      XP_001163417
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      1,280 aa
    • E Value
      1.25E-4
    • BLAST Score
      49.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XP_001163417
      1.09% cov
    • Alignment Length
      14 aa
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297681136
      XP_002818322
    • Hit length
      1,279 aa
    • E Value
      1.27E-4
    • BLAST Score
      49.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XP_002818322
      1.09% cov
    • Alignment Length
      14 aa
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296209780
      XP_002751680
      1 of 2 hits reported for Callithrix jacchus.
    • Hit length
      1,279 aa
    • E Value
      1.76E-3
    • BLAST Score
      45.6 bits
    • Similarity
      92.86%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XP_002751680
      1.09% cov
    • Alignment Length
      14 aa
  • Ovis aries

    Ovis aries

    • Public DB hit
      GI:57526446
      NP_001009790
    • Hit length
      1,285 aa
    • E Value
      4.88E-3
    • BLAST Score
      43.9 bits
    • Similarity
      92.86%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NP_001009790
      1.09% cov
    • Alignment Length
      14 aa
Occurrence
18 times in PatSeqDB
Tools
SEQ ID NO
8
Length
10
Sequence Type
peptide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:119597347
      EAW76941
      1 of 2 hits reported for Homo sapiens.
    • Hit length
      405 aa
    • E Value
      1.05E4
    • BLAST Score
      23.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      EAW76941
      2.47% cov
    • Alignment Length
      10 aa
    • CIGAR string
      10M mismatches: 0 - insertions: 0 - deletions: 0
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:2460061
      AAB71852
    • Hit length
      53 aa
    • E Value
      1.05E4
    • BLAST Score
      23.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      AAB71852
      18.87% cov
    • Alignment Length
      10 aa
    • CIGAR string
      10M mismatches: 0 - insertions: 0 - deletions: 0
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:74201363
      BAE26128
      1 of 9 hits reported for Mus musculus.
    • Hit length
      490 aa
    • E Value
      1.07E4
    • BLAST Score
      23.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      BAE26128
      2.04% cov
    • Alignment Length
      10 aa
    • CIGAR string
      10M mismatches: 0 - insertions: 0 - deletions: 0
  • Cricetulus sp.

    Cricetulus sp.

    • Public DB hit
      GI:191153
      AAA37003
    • Hit length
      538 aa
    • E Value
      1.13E4
    • BLAST Score
      22.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      AAA37003
      1.86% cov
    • Alignment Length
      10 aa
  • Cricetulus griseus

    Cricetulus griseus

    • Public DB hit
      GI:191159
      AAA37006
      1 of 2 hits reported for Cricetulus griseus.
    • Hit length
      571 aa
    • E Value
      1.17E4
    • BLAST Score
      22.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      AAA37006
      1.75% cov
    • Alignment Length
      10 aa
  • Monodelphis domestica

    Monodelphis domestica

    • Public DB hit
      GI:126341535
      XP_001377623
      1 of 2 hits reported for Monodelphis domestica.
    • Hit length
      1,364 aa
    • E Value
      1.2E4
    • BLAST Score
      22.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XP_001377623
      0.73% cov
    • Alignment Length
      10 aa
  • Oryctolagus cuniculus

    Oryctolagus cuniculus

    • Public DB hit
      GI:126723044
      NP_001075628
      1 of 2 hits reported for Oryctolagus cuniculus.
    • Hit length
      1,279 aa
    • E Value
      1.2E4
    • BLAST Score
      22.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NP_001075628
      0.78% cov
    • Alignment Length
      10 aa
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332206611
      XP_003252391
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      1,216 aa
    • E Value
      1.21E4
    • BLAST Score
      22.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XP_003252391
      0.82% cov
    • Alignment Length
      10 aa
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:74136329
      NP_001028059
      1 of 3 hits reported for Macaca mulatta.
    • Hit length
      1,283 aa
    • E Value
      1.21E4
    • BLAST Score
      22.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NP_001028059
      0.78% cov
    • Alignment Length
      10 aa
  • Macaca fascicularis

    Macaca fascicularis

    • Public DB hit
      GI:31442763
      AAN07780
    • Hit length
      1,283 aa
    • E Value
      1.21E4
    • BLAST Score
      22.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      AAN07780
      0.78% cov
    • Alignment Length
      10 aa
Occurrence
9 times in PatSeqDB
Tools
SEQ ID NO
9
Length
16
Sequence Type
peptide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:8926217
      AAF81747
    • Hit length
      1,287 aa
    • E Value
      2.05E0
    • BLAST Score
      35.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      AAF81747
      1.24% cov
    • Alignment Length
      16 aa
    • CIGAR string
      16M mismatches: 0 - insertions: 0 - deletions: 0
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:50978984
      NP_001003215
      1 of 5 hits reported for Canis lupus familiaris.
    • Hit length
      1,280 aa
    • E Value
      2.28E0
    • BLAST Score
      35.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      NP_001003215
      1.25% cov
    • Alignment Length
      16 aa
    • CIGAR string
      16M mismatches: 0 - insertions: 0 - deletions: 0
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:62087520
      BAD92207
      1 of 4 hits reported for Homo sapiens.
    • Hit length
      1,062 aa
    • E Value
      2.61E0
    • BLAST Score
      35.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      BAD92207
      1.51% cov
    • Alignment Length
      16 aa
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301756332
      XP_002914014
      1 of 3 hits reported for Ailuropoda melanoleuca.
    • Hit length
      1,280 aa
    • E Value
      2.83E0
    • BLAST Score
      35.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XP_002914014
      1.25% cov
    • Alignment Length
      16 aa
  • Felis catus

    Felis catus

    • Public DB hit
      GI:283806558
      NP_001164535
      1 of 2 hits reported for Felis catus.
    • Hit length
      1,279 aa
    • E Value
      2.83E0
    • BLAST Score
      35.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      NP_001164535
      1.25% cov
    • Alignment Length
      16 aa
  • Chlorocebus aethiops

    Chlorocebus aethiops

    • Public DB hit
      GI:60326712
      AAX18881
    • Hit length
      1,280 aa
    • E Value
      2.83E0
    • BLAST Score
      35.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      AAX18881
      1.25% cov
    • Alignment Length
      16 aa
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:335295551
      XP_003130261
      1 of 3 hits reported for Sus scrofa.
    • Hit length
      1,315 aa
    • E Value
      3.08E0
    • BLAST Score
      35.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XP_003130261
      1.22% cov
    • Alignment Length
      16 aa
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296209780
      XP_002751680
      1 of 2 hits reported for Callithrix jacchus.
    • Hit length
      1,279 aa
    • E Value
      3.1E0
    • BLAST Score
      35.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XP_002751680
      1.25% cov
    • Alignment Length
      16 aa
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:114614336
      XP_001163417
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      1,280 aa
    • E Value
      3.18E0
    • BLAST Score
      35.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XP_001163417
      1.25% cov
    • Alignment Length
      16 aa
Occurrence
12 times in PatSeqDB
Tools
SEQ ID NO
10
Length
17
Sequence Type
peptide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332206611
      XP_003252391
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      1,216 aa
    • E Value
      5.3E-2
    • BLAST Score
      41.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XP_003252391
      1.4% cov
    • Alignment Length
      17 aa
    • CIGAR string
      17M mismatches: 0 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297681136
      XP_002818322
      1 of 2 hits reported for Pongo abelii.
    • Hit length
      1,279 aa
    • E Value
      5.3E-2
    • BLAST Score
      41.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XP_002818322
      1.33% cov
    • Alignment Length
      17 aa
    • CIGAR string
      17M mismatches: 0 - insertions: 0 - deletions: 0
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296209782
      XP_002751681
      1 of 4 hits reported for Callithrix jacchus.
    • Hit length
      1,215 aa
    • E Value
      5.3E-2
    • BLAST Score
      41.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XP_002751681
      1.4% cov
    • Alignment Length
      17 aa
    • CIGAR string
      17M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:114614336
      XP_001163417
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      1,280 aa
    • E Value
      5.3E-2
    • BLAST Score
      41.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XP_001163417
      1.33% cov
    • Alignment Length
      17 aa
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:42741659
      NP_000918
      1 of 9 hits reported for Homo sapiens.
    • Hit length
      1,280 aa
    • E Value
      5.3E-2
    • BLAST Score
      41.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      NP_000918
      1.33% cov
    • Alignment Length
      17 aa
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:46394984
      AAS91648
      1 of 2 hits reported for Macaca mulatta.
    • Hit length
      1,283 aa
    • E Value
      5.3E-2
    • BLAST Score
      41.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      AAS91648
      1.33% cov
    • Alignment Length
      17 aa
  • Chlorocebus aethiops

    Chlorocebus aethiops

    • Public DB hit
      GI:60326712
      AAX18881
    • Hit length
      1,280 aa
    • E Value
      5.3E-2
    • BLAST Score
      41.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      AAX18881
      1.33% cov
    • Alignment Length
      17 aa
  • Macaca fascicularis

    Macaca fascicularis

    • Public DB hit
      GI:31442763
      AAN07780
    • Hit length
      1,283 aa
    • E Value
      5.62E-2
    • BLAST Score
      41.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      AAN07780
      1.33% cov
    • Alignment Length
      17 aa
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:297473685
      XP_002686777
    • Hit length
      1,468 aa
    • E Value
      7.59E-2
    • BLAST Score
      40.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XP_002686777
      1.16% cov
    • Alignment Length
      17 aa
Occurrence
12 times in PatSeqDB
Tools

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