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Search for Biological Sequences disclosed in Patents

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Data obtained from: USPTO Fulltext
22 sequences found in this patent (in total)

Displaying 1 - 10 of 22 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
122
Type
peptide
Locations
Claims, Detailed Description, Summary

Declared organism:
Camelidae

Determined organism:
  • Vicugna pacos

    Vicugna pacos

    • Public DB hit
      GI:167728995
      CAP58558
    • Hit length
      131 aa
    • E Value
      6.97E-62
    • BLAST Score
      240.7 bits
    • Similarity
      97.52%
    • Coverage
      99.18%
    • Alignment (schematic)

      SEQ ID NO 1
      99.18% cov
      CAP58558
      92.37% cov
    • Alignment Length
      121 aa
    • CIGAR string
      1H36MN6M2N76M mismatches: 3 - insertions: 0 - deletions: 0
  • Lama glama

    Lama glama

    • Public DB hit
      GI:17149005
      AAL35877
      1 of 6 hits reported for Lama glama.
    • Hit length
      117 aa
    • E Value
      2.11E-44
    • BLAST Score
      182.6 bits
    • Similarity
      82.64%
    • Coverage
      99.18%
    • Alignment (schematic)

      SEQ ID NO 1
      99.18% cov
      AAL35877
      99.15% cov
    • Alignment Length
      121 aa
    • CIGAR string
      1H10MN16MNM4N16MNM2N2M2NMNMN12MN5MN12MN3MDM3N2M4D2N4MN7M mismatches: 22 - insertions: 0 - deletions: 5
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:8489285
      AAF75632
      1 of 16 hits reported for Homo sapiens.
    • Hit length
      122 aa
    • E Value
      2.73E-43
    • BLAST Score
      179.1 bits
    • Similarity
      79.34%
    • Coverage
      99.18%
    • Alignment (schematic)

      SEQ ID NO 1
      99.18% cov
      AAF75632
      99.18% cov
    • Alignment Length
      121 aa
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:25988414
      AAN76133
    • Hit length
      125 aa
    • E Value
      4.89E-43
    • BLAST Score
      178.3 bits
    • Similarity
      79.51%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      AAN76133
      92.8% cov
    • Alignment Length
      122 aa
  • Camelus dromedarius

    Camelus dromedarius

    • Public DB hit
      GI:38092307
      BAD00231
    • Hit length
      120 aa
    • E Value
      3.12E-42
    • BLAST Score
      175.6 bits
    • Similarity
      80.65%
    • Coverage
      99.18%
    • Alignment (schematic)

      SEQ ID NO 1
      99.18% cov
      BAD00231
      99.17% cov
    • Alignment Length
      124 aa
Occurrence
14 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
114
Type
peptide
Locations
Claims, Detailed Description, Summary

Declared organism:
Camelidae

Determined organism:
  • Vicugna pacos

    Vicugna pacos

    • Public DB hit
      GI:167728997
      CAP58559
      1 of 4 hits reported for Vicugna pacos.
    • Hit length
      114 aa
    • E Value
      1.27E-59
    • BLAST Score
      233.4 bits
    • Similarity
      100%
    • Coverage
      99.12%
    • Alignment (schematic)

      SEQ ID NO 2
      99.12% cov
      CAP58559
      99.12% cov
    • Alignment Length
      113 aa
    • CIGAR string
      1H113M mismatches: 0 - insertions: 0 - deletions: 0
  • Lama glama

    Lama glama

    • Public DB hit
      GI:319443694
      3P0G_B
      1 of 15 hits reported for Lama glama.
    • Hit length
      126 aa
    • E Value
      3.67E-46
    • BLAST Score
      188.3 bits
    • Similarity
      84.87%
    • Coverage
      99.12%
    • Alignment (schematic)

      SEQ ID NO 2
      99.12% cov
      3P0G_B
      94.44% cov
    • Alignment Length
      119 aa
    • CIGAR string
      1HN4MN21MNMN2MN16MNMN8MN13M2N2MNMN15M6I6N11M mismatches: 18 - insertions: 6 - deletions: 0
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:149211521
      ABR22050
      1 of 6 hits reported for synthetic construct.
    • Hit length
      127 aa
    • E Value
      3.35E-44
    • BLAST Score
      182.2 bits
    • Similarity
      80.99%
    • Coverage
      99.12%
    • Alignment (schematic)

      SEQ ID NO 2
      99.12% cov
      ABR22050
      95.28% cov
    • Alignment Length
      121 aa
Occurrence
14 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
3
Length
118
Type
peptide
Locations
Detailed Description

Declared organism:
Camelidae

Determined organism:
  • Vicugna pacos

    Vicugna pacos

    • Public DB hit
      GI:167729001
      CAP58561
      1 of 5 hits reported for Vicugna pacos.
    • Hit length
      118 aa
    • E Value
      8.22E-63
    • BLAST Score
      243.8 bits
    • Similarity
      100%
    • Coverage
      99.15%
    • Alignment (schematic)

      SEQ ID NO 3
      99.15% cov
      CAP58561
      99.15% cov
    • Alignment Length
      117 aa
    • CIGAR string
      1H117M mismatches: 0 - insertions: 0 - deletions: 0
  • Lama glama

    Lama glama

    • Public DB hit
      GI:223674030
      3EZJ_B
      1 of 19 hits reported for Lama glama.
    • Hit length
      126 aa
    • E Value
      4.58E-40
    • BLAST Score
      168.3 bits
    • Similarity
      80%
    • Coverage
      99.15%
    • Alignment (schematic)

      SEQ ID NO 3
      99.15% cov
      3EZJ_B
      94.44% cov
    • Alignment Length
      120 aa
    • CIGAR string
      1HN4MN16MN2MNMND2MNMNMNMN8MN3MNM4NMN2MN22MN13M3I5NM4N10M mismatches: 27 - insertions: 3 - deletions: 1
Occurrence
14 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
4
Length
21
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Lachancea thermotolerans CBS 6340

    Lachancea thermotolerans CBS 6340

    • Public DB hit
      GI:255715264
      XM_002553868
      1 of 3 hits reported for Lachancea thermotolerans CBS 6340.
    • Hit length
      1,197 bp
    • E Value
      6.21E0
    • BLAST Score
      34.2 bits
    • Similarity
      95.24%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XM_002553868
      1.75% cov
    • Alignment Length
      21 bp
  • Lama glama

    Lama glama

    • Public DB hit
      GI:298573494
      HM209028
      1 of 2 hits reported for Lama glama.
    • Hit length
      645 bp
    • E Value
      6.21E0
    • BLAST Score
      34.2 bits
    • Similarity
      95.24%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      HM209028
      3.26% cov
    • Alignment Length
      21 bp
  • Vicugna pacos

    Vicugna pacos

    • Public DB hit
      GI:194360524
      AM773729
    • Hit length
      222,796 bp
    • E Value
      6.21E0
    • BLAST Score
      34.2 bits
    • Similarity
      95.24%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      AM773729
      0.01% cov
    • Alignment Length
      21 bp
  • Camelus dromedarius

    Camelus dromedarius

    • Public DB hit
      GI:21213822
      AJ421266
      1 of 3 hits reported for Camelus dromedarius.
    • Hit length
      1,036 bp
    • E Value
      6.21E0
    • BLAST Score
      34.2 bits
    • Similarity
      95.24%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      AJ421266
      2.03% cov
    • Alignment Length
      21 bp
Occurrence
176 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
5
Length
29
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Lama glama

    Lama glama

    • Public DB hit
      GI:196050977
      EU927383
      1 of 17 hits reported for Lama glama.
    • Hit length
      381 bp
    • E Value
      9.45E-6
    • BLAST Score
      55.3 bits
    • Similarity
      96.55%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      EU927383
      7.61% cov
    • Alignment Length
      29 bp
    • CIGAR string
      23MN5M mismatches: 1 - insertions: 0 - deletions: 0
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:63021536
      AY860439
      1 of 8 hits reported for synthetic construct.
    • Hit length
      1,071 bp
    • E Value
      9.45E-6
    • BLAST Score
      55.3 bits
    • Similarity
      96.55%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      AY860439
      2.71% cov
    • Alignment Length
      29 bp
    • CIGAR string
      23MN5M mismatches: 1 - insertions: 0 - deletions: 0
Occurrence
55 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
6
Length
45
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:336286286
      HQ680973
      1 of 21 hits reported for synthetic construct.
    • Hit length
      474 bp
    • E Value
      1.54E-8
    • BLAST Score
      65.8 bits
    • Similarity
      94.44%
    • Coverage
      80%
    • Alignment (schematic)

      SEQ ID NO 6
      80% cov
      HQ680973
      7.59% cov
    • Alignment Length
      36 bp
    • CIGAR string
      9H27MN2MN5M mismatches: 2 - insertions: 0 - deletions: 0
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:81251583
      DQ184512
      1 of 3 hits reported for Homo sapiens.
    • Hit length
      414 bp
    • E Value
      1.54E-8
    • BLAST Score
      65.8 bits
    • Similarity
      94.44%
    • Coverage
      80%
    • Alignment (schematic)

      SEQ ID NO 6
      80% cov
      DQ184512
      8.7% cov
    • Alignment Length
      36 bp
  • Bacterial selection and production vector pMES4

    Bacterial selection and production vector pMES4

    • Public DB hit
      GI:260505638
      GQ907248
    • Hit length
      4,501 bp
    • E Value
      4.44E-6
    • BLAST Score
      57.7 bits
    • Similarity
      91.67%
    • Coverage
      80%
    • Alignment (schematic)

      SEQ ID NO 6
      80% cov
      GQ907248
      0.8% cov
    • Alignment Length
      36 bp
Occurrence
36 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
7
Length
35
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
Occurrence
29 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
8
Length
41
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Lama glama

    Lama glama

    • Public DB hit
      GI:307343309
      FR691890
      1 of 19 hits reported for Lama glama.
    • Hit length
      392 bp
    • E Value
      4.86E-8
    • BLAST Score
      63.9 bits
    • Similarity
      100%
    • Coverage
      78.05%
    • Alignment (schematic)

      SEQ ID NO 8
      78.05% cov
      FR691890
      8.16% cov
    • Alignment Length
      32 bp
    • CIGAR string
      9H32M mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
35 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
9
Length
65
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Serratia sp. ATCC 39006

    Serratia sp. ATCC 39006

    • Public DB hit
      GI:238955493
      FN396602
    • Hit length
      2,693 bp
    • E Value
      1.4E-10
    • BLAST Score
      73.1 bits
    • Similarity
      92.31%
    • Coverage
      80%
    • Alignment (schematic)

      SEQ ID NO 9
      80% cov
      FN396602
      1.89% cov
    • Alignment Length
      52 bp
    • CIGAR string
      5MN2MD2MNMN38M13H mismatches: 3 - insertions: 0 - deletions: 1
  • Expression vector pPANK

    Expression vector pPANK

    • Public DB hit
      GI:34421983
      AY327140
    • Hit length
      3,474 bp
    • E Value
      1.4E-10
    • BLAST Score
      73.1 bits
    • Similarity
      92.31%
    • Coverage
      80%
    • Alignment (schematic)

      SEQ ID NO 9
      80% cov
      AY327140
      1.47% cov
    • Alignment Length
      52 bp
    • CIGAR string
      5MN2MD2MNMN38M13H mismatches: 3 - insertions: 0 - deletions: 1
  • Cloning vector pQStrep2

    Cloning vector pQStrep2

    • Public DB hit
      GI:13488583
      AY028642
    • Hit length
      3,499 bp
    • E Value
      1.4E-10
    • BLAST Score
      73.1 bits
    • Similarity
      92.31%
    • Coverage
      80%
    • Alignment (schematic)

      SEQ ID NO 9
      80% cov
      AY028642
      1.46% cov
    • Alignment Length
      52 bp
    • CIGAR string
      5MN2MD2MNMN38M13H mismatches: 3 - insertions: 0 - deletions: 1
  • Expression vector pNS2T5

    Expression vector pNS2T5

    • Public DB hit
      GI:183579195
      EU600163
    • Hit length
      3,000 bp
    • E Value
      5.04E-10
    • BLAST Score
      71.3 bits
    • Similarity
      92.16%
    • Coverage
      78.46%
    • Alignment (schematic)

      SEQ ID NO 9
      78.46% cov
      EU600163
      1.67% cov
    • Alignment Length
      51 bp
  • Expression vector pNST5

    Expression vector pNST5

    • Public DB hit
      GI:90192322
      DQ412054
    • Hit length
      2,810 bp
    • E Value
      5.04E-10
    • BLAST Score
      71.3 bits
    • Similarity
      92.16%
    • Coverage
      78.46%
    • Alignment (schematic)

      SEQ ID NO 9
      78.46% cov
      DQ412054
      1.78% cov
    • Alignment Length
      51 bp
  • Expression vector pCDS-At

    Expression vector pCDS-At

    • Public DB hit
      GI:294653638
      GU828015
    • Hit length
      3,919 bp
    • E Value
      1.81E-9
    • BLAST Score
      69.4 bits
    • Similarity
      92%
    • Coverage
      76.92%
    • Alignment (schematic)

      SEQ ID NO 9
      76.92% cov
      GU828015
      1.25% cov
    • Alignment Length
      50 bp
  • Expression vector pSH476

    Expression vector pSH476

    • Public DB hit
      GI:188485336
      EU679367
    • Hit length
      3,352 bp
    • E Value
      1.81E-9
    • BLAST Score
      69.4 bits
    • Similarity
      92%
    • Coverage
      76.92%
    • Alignment (schematic)

      SEQ ID NO 9
      76.92% cov
      EU679367
      1.46% cov
    • Alignment Length
      50 bp
  • Expression vector pYB100

    Expression vector pYB100

    • Public DB hit
      GI:169822910
      EU520475
    • Hit length
      5,660 bp
    • E Value
      1.81E-9
    • BLAST Score
      69.4 bits
    • Similarity
      92%
    • Coverage
      76.92%
    • Alignment (schematic)

      SEQ ID NO 9
      76.92% cov
      EU520475
      0.87% cov
    • Alignment Length
      50 bp
Occurrence
14 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
10
Length
31
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
Occurrence
14 times in PatSeqDB
Tools
PatSeq Finder

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