Loading...

Search for Biological Sequences disclosed in Patents

Discover PatSeq Finder: Search and analyse similar sequence matches in the Lens PatSeq database effortlessly using PatSeq Finder. Scan 480M+ biological sequences disclosed in patents on a privacy-assured platform and give your IP strategy the edge.

View PatSeq Dismiss
Data obtained from: DDBJ Pat NCBI GenBank USPTO Fulltext EMBL-EBI Pat
22 sequences found in this patent (in total)

Displaying 1 - 10 of 22 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
20
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:335301648
      XM_001926369
      1 of 2 hits reported for Sus scrofa.
    • Hit length
      3,438 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XM_001926369
      0.58% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332834095
      XM_003312564
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      5,940 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XM_003312564
      0.34% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332244091
      XM_003271158
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      5,665 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XM_003271158
      0.35% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:308193331
      NM_001197099
      1 of 2 hits reported for Canis lupus familiaris.
    • Hit length
      4,135 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      NM_001197099
      0.48% cov
    • Alignment Length
      20 bp
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301763822
      XM_002917296
      1 of 2 hits reported for Ailuropoda melanoleuca.
    • Hit length
      3,315 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XM_002917296
      0.6% cov
    • Alignment Length
      20 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297686310
      XM_002820653
      1 of 2 hits reported for Pongo abelii.
    • Hit length
      3,547 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XM_002820653
      0.56% cov
    • Alignment Length
      20 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297300830
      XM_002805626
      1 of 2 hits reported for Macaca mulatta.
    • Hit length
      3,370 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XM_002805626
      0.59% cov
    • Alignment Length
      20 bp
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:126273513
      NM_020630
      1 of 8 hits reported for Homo sapiens.
    • Hit length
      4,174 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      NM_020630
      0.48% cov
    • Alignment Length
      20 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:168277389
      AB384817
      1 of 3 hits reported for synthetic construct.
    • Hit length
      3,233 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      AB384817
      0.62% cov
    • Alignment Length
      20 bp
Occurrence
4 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
20
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332834095
      XM_003312564
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      5,940 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XM_003312564
      0.34% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332244091
      XM_003271158
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      5,665 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XM_003271158
      0.35% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297686310
      XM_002820653
      1 of 2 hits reported for Pongo abelii.
    • Hit length
      3,547 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XM_002820653
      0.56% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297300830
      XM_002805626
      1 of 2 hits reported for Macaca mulatta.
    • Hit length
      3,370 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XM_002805626
      0.59% cov
    • Alignment Length
      20 bp
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:126273513
      NM_020630
      1 of 14 hits reported for Homo sapiens.
    • Hit length
      4,174 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NM_020630
      0.48% cov
    • Alignment Length
      20 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:168277389
      AB384817
      1 of 3 hits reported for synthetic construct.
    • Hit length
      3,233 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      AB384817
      0.62% cov
    • Alignment Length
      20 bp
Occurrence
4 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
3
Length
20
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332835094
      XM_001150668
      1 of 4 hits reported for Pan troglodytes.
    • Hit length
      9,521 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XM_001150668
      0.21% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332211860
      XM_003254986
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      3,141 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XM_003254986
      0.64% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297687425
      XM_002821167
      1 of 2 hits reported for Pongo abelii.
    • Hit length
      9,402 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XM_002821167
      0.21% cov
    • Alignment Length
      20 bp
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:224282177
      NM_001145453
      1 of 13 hits reported for Homo sapiens.
    • Hit length
      9,235 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NM_001145453
      0.22% cov
    • Alignment Length
      20 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:307684719
      AB590245
      1 of 4 hits reported for synthetic construct.
    • Hit length
      1,397 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      AB590245
      1.43% cov
    • Alignment Length
      20 bp
Occurrence
4 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
4
Length
21
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332835094
      XM_001150668
      1 of 4 hits reported for Pan troglodytes.
    • Hit length
      9,521 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XM_001150668
      0.22% cov
    • Alignment Length
      21 bp
    • CIGAR string
      21M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332211860
      XM_003254986
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      3,141 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XM_003254986
      0.67% cov
    • Alignment Length
      21 bp
    • CIGAR string
      21M mismatches: 0 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297687425
      XM_002821167
      1 of 2 hits reported for Pongo abelii.
    • Hit length
      9,402 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XM_002821167
      0.22% cov
    • Alignment Length
      21 bp
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:224282177
      NM_001145453
      1 of 9 hits reported for Homo sapiens.
    • Hit length
      9,235 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NM_001145453
      0.23% cov
    • Alignment Length
      21 bp
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:194205638
      XM_001497773
      1 of 2 hits reported for Equus caballus.
    • Hit length
      1,817 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XM_001497773
      1.16% cov
    • Alignment Length
      21 bp
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:157427947
      NM_001105411
      1 of 2 hits reported for Bos taurus.
    • Hit length
      3,022 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NM_001105411
      0.69% cov
    • Alignment Length
      21 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:307684719
      AB590245
      1 of 4 hits reported for synthetic construct.
    • Hit length
      1,397 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      AB590245
      1.5% cov
    • Alignment Length
      21 bp
Occurrence
4 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
5
Length
20
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332822023
      XM_001170910
      1 of 4 hits reported for Pan troglodytes.
    • Hit length
      2,126 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XM_001170910
      0.94% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332234579
      XM_003266435
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      1,971 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XM_003266435
      1.01% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297295160
      XM_001112599
      1 of 4 hits reported for Macaca mulatta.
    • Hit length
      1,544 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XM_001112599
      1.3% cov
    • Alignment Length
      20 bp
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:45593145
      NM_001496
      1 of 9 hits reported for Homo sapiens.
    • Hit length
      1,980 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NM_001496
      1.01% cov
    • Alignment Length
      20 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:123994656
      DQ894004
      1 of 2 hits reported for synthetic construct.
    • Hit length
      1,243 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      DQ894004
      1.61% cov
    • Alignment Length
      20 bp
Occurrence
4 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
6
Length
20
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332822023
      XM_001170910
      1 of 4 hits reported for Pan troglodytes.
    • Hit length
      2,126 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_001170910
      0.94% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297676079
      XM_002815928
      1 of 2 hits reported for Pongo abelii.
    • Hit length
      1,823 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_002815928
      1.1% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297295160
      XM_001112599
      1 of 4 hits reported for Macaca mulatta.
    • Hit length
      1,544 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_001112599
      1.3% cov
    • Alignment Length
      20 bp
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:45593145
      NM_001496
      1 of 10 hits reported for Homo sapiens.
    • Hit length
      1,980 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NM_001496
      1.01% cov
    • Alignment Length
      20 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:123994656
      DQ894004
      1 of 2 hits reported for synthetic construct.
    • Hit length
      1,243 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      DQ894004
      1.61% cov
    • Alignment Length
      20 bp
Occurrence
4 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
7
Length
20
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:163954974
      NG_007073
      1 of 2 hits reported for Homo sapiens.
    • Hit length
      10,880 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NG_007073
      0.18% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332860561
      XR_019963
      1 of 6 hits reported for Pan troglodytes.
    • Hit length
      1,220 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XR_019963
      1.64% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332243775
      XR_122234
      1 of 4 hits reported for Nomascus leucogenys.
    • Hit length
      1,226 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XR_122234
      1.63% cov
    • Alignment Length
      20 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:306482640
      NM_001195426
      1 of 3 hits reported for Macaca mulatta.
    • Hit length
      1,106 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NM_001195426
      1.81% cov
    • Alignment Length
      20 bp
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301777483
      XM_002924114
      1 of 2 hits reported for Ailuropoda melanoleuca.
    • Hit length
      796 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XM_002924114
      2.51% cov
    • Alignment Length
      20 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297709736
      XR_095984
      1 of 4 hits reported for Pongo abelii.
    • Hit length
      1,239 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XR_095984
      1.61% cov
    • Alignment Length
      20 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296237263
      XR_091132
      1 of 3 hits reported for Callithrix jacchus.
    • Hit length
      1,022 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XR_091132
      1.96% cov
    • Alignment Length
      20 bp
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:73961358
      XM_848906
    • Hit length
      760 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XM_848906
      2.63% cov
    • Alignment Length
      20 bp
Occurrence
37 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
8
Length
19
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Monodelphis domestica

    Monodelphis domestica

    • Public DB hit
      GI:334348289
      XM_001364697
      1 of 2 hits reported for Monodelphis domestica.
    • Hit length
      1,056 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XM_001364697
      1.8% cov
    • Alignment Length
      19 bp
    • CIGAR string
      19M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332860561
      XR_019963
      1 of 4 hits reported for Pan troglodytes.
    • Hit length
      1,220 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XR_019963
      1.56% cov
    • Alignment Length
      19 bp
    • CIGAR string
      19M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332243833
      XR_122242
      1 of 4 hits reported for Nomascus leucogenys.
    • Hit length
      1,008 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XR_122242
      1.88% cov
    • Alignment Length
      19 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:306482640
      NM_001195426
      1 of 5 hits reported for Macaca mulatta.
    • Hit length
      1,106 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NM_001195426
      1.72% cov
    • Alignment Length
      19 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297709813
      XR_095997
      1 of 7 hits reported for Pongo abelii.
    • Hit length
      1,237 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XR_095997
      1.54% cov
    • Alignment Length
      19 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296224024
      XR_089930
      1 of 3 hits reported for Callithrix jacchus.
    • Hit length
      990 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XR_089930
      1.92% cov
    • Alignment Length
      19 bp
Occurrence
34 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
9
Length
26
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:171184431
      NG_007489
      1 of 14 hits reported for Homo sapiens.
    • Hit length
      60,283 bp
    • E Value
      6.17E-5
    • BLAST Score
      52 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      NG_007489
      0.04% cov
    • Alignment Length
      26 bp
    • CIGAR string
      26M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332834095
      XM_003312564
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      5,940 bp
    • E Value
      6.17E-5
    • BLAST Score
      52 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XM_003312564
      0.44% cov
    • Alignment Length
      26 bp
    • CIGAR string
      26M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332244091
      XM_003271158
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      5,665 bp
    • E Value
      6.17E-5
    • BLAST Score
      52 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XM_003271158
      0.46% cov
    • Alignment Length
      26 bp
    • CIGAR string
      26M mismatches: 0 - insertions: 0 - deletions: 0
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297300830
      XM_002805626
      1 of 2 hits reported for Macaca mulatta.
    • Hit length
      3,370 bp
    • E Value
      6.17E-5
    • BLAST Score
      52 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XM_002805626
      0.77% cov
    • Alignment Length
      26 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296220048
      XM_002756106
      1 of 2 hits reported for Callithrix jacchus.
    • Hit length
      3,405 bp
    • E Value
      6.17E-5
    • BLAST Score
      52 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XM_002756106
      0.76% cov
    • Alignment Length
      26 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:168277389
      AB384817
      1 of 3 hits reported for synthetic construct.
    • Hit length
      3,233 bp
    • E Value
      6.17E-5
    • BLAST Score
      52 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      AB384817
      0.8% cov
    • Alignment Length
      26 bp
Occurrence
4 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
10
Length
25
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332835094
      XM_001150668
      1 of 4 hits reported for Pan troglodytes.
    • Hit length
      9,521 bp
    • E Value
      2.09E-4
    • BLAST Score
      50.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XM_001150668
      0.26% cov
    • Alignment Length
      25 bp
    • CIGAR string
      25M mismatches: 0 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297687425
      XM_002821167
      1 of 2 hits reported for Pongo abelii.
    • Hit length
      9,402 bp
    • E Value
      2.09E-4
    • BLAST Score
      50.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XM_002821167
      0.27% cov
    • Alignment Length
      25 bp
    • CIGAR string
      25M mismatches: 0 - insertions: 0 - deletions: 0
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:224282177
      NM_001145453
      1 of 15 hits reported for Homo sapiens.
    • Hit length
      9,235 bp
    • E Value
      2.09E-4
    • BLAST Score
      50.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      NM_001145453
      0.27% cov
    • Alignment Length
      25 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:307684719
      AB590245
      1 of 4 hits reported for synthetic construct.
    • Hit length
      1,397 bp
    • E Value
      2.09E-4
    • BLAST Score
      50.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      AB590245
      1.79% cov
    • Alignment Length
      25 bp
Occurrence
4 times in PatSeqDB
Tools
PatSeq Finder

Filter Sequences

Clear

Sign in to the Lens

Forgot Password? Register New Account

Language Improvements

We have been busy updating our localisation and all existing languages.

Much of these translations have been done using machine translation with a check from a native speaker, however not all elements of the UI have been checked for each language. If you see a term that is not translated correctly or should be improved, please contact Support.

  Don't show again
Feedback