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Search for Biological Sequences disclosed in Patents

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Data obtained from: NCBI GenBank USPTO Fulltext EMBL-EBI Pat

25 sequences found in this patent (in total)

Displaying 1 - 10 of 25 sequences

SEQ ID NO

Length

Type

Locations

Organisms

Occurrence

Tools

SEQ ID NO

Length

Type

peptide

Locations

Detailed Description, Summary

Declared organism:
Alphapapillomavirus 13

Determined organism:

synthetic construct
synthetic construct
Public DB hit
GI:47681307
AAT37474

Hit length
334 aa

E Value
1.18E1

BLAST Score
32.5 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 1

100% cov
AAT37474

2.69% cov

Alignment Length
9 aa

CIGAR string
9M mismatches: 0 - insertions: 0 - deletions: 0

Occurrence

19 times in PatSeqDB

in 4 families
in 17 documents

Tools

PatSeq Finder

SEQ ID NO

Length

Type

peptide

Locations

Detailed Description, Summary

Declared organism:
Alphapapillomavirus 13

Determined organism:

Occurrence

23 times in PatSeqDB

in 6 families
(1 referenced in claims)
in 19 documents

Tools

PatSeq Finder

SEQ ID NO

Length

Type

peptide

Locations

Detailed Description, Summary

Declared organism:
Alphapapillomavirus 13

Determined organism:

Occurrence

121 times in PatSeqDB

in 25 extended families
(4 referenced in claims)
in 26 simple families
(4 referenced in claims)
in 100 documents

Tools

PatSeq Finder

SEQ ID NO

Length

Type

peptide

Locations

Detailed Description, Summary

Declared organism:
Alphapapillomavirus 13

Determined organism:

Laccaria bicolor S238N-H82
Laccaria bicolor S238N-H82
Public DB hit
GI:170090179
XP_001876312

Hit length
314 aa

E Value
2.18E3

BLAST Score
25.2 bits

Similarity

90%

Coverage

100%

Alignment (schematic)

SEQ ID NO 4

100% cov
XP_001876312

3.18% cov

Alignment Length
10 aa
Moniliophthora perniciosa FA553
Moniliophthora perniciosa FA553
Public DB hit
GI:238579827
XP_002389170

Hit length
285 aa

E Value
3.61E3

BLAST Score
24.4 bits

Similarity

90%

Coverage

100%

Alignment (schematic)

SEQ ID NO 4

100% cov
XP_002389170

3.51% cov

Alignment Length
10 aa

Occurrence

257 times in PatSeqDB

in 67 extended families
(10 referenced in claims)
in 75 simple families
(10 referenced in claims)
in 225 documents

Tools

PatSeq Finder

SEQ ID NO

Length

Type

peptide

Locations

Detailed Description, Summary

Declared organism:
Alphapapillomavirus 13

Determined organism:

synthetic construct
synthetic construct
Public DB hit
GI:47681307
AAT37474

Hit length
334 aa

E Value
1.6E1

BLAST Score
32 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 5

100% cov
AAT37474

2.69% cov

Alignment Length
9 aa

CIGAR string
9M mismatches: 0 - insertions: 0 - deletions: 0

Occurrence

12 times in PatSeqDB

in 3 families
in 12 documents

Tools

PatSeq Finder

SEQ ID NO

Length

Type

peptide

Locations

Detailed Description, Summary

Declared organism:
Alphapapillomavirus 13

Determined organism:

Chaetomium globosum CBS 148.51
Chaetomium globosum CBS 148.51
Public DB hit
GI:116195254
XP_001223439

Hit length
169 aa

E Value
3.7E2

BLAST Score
27.8 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 6

100% cov
XP_001223439

5.33% cov

Alignment Length
9 aa

CIGAR string
3MNMN3M mismatches: 2 - insertions: 0 - deletions: 0
synthetic construct
synthetic construct
Public DB hit
GI:47681307
AAT37474
1 of 3 hits reported for synthetic construct.

Hit length
334 aa

E Value
9.64E3

BLAST Score
23.1 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 6

100% cov
AAT37474

2.69% cov

Alignment Length
9 aa
Human papillomavirus type 16
Human papillomavirus type 16
Public DB hit
GI:215433605
ACJ66713
1 of 5 hits reported for Human papillomavirus type 16.

Hit length
98 aa

E Value
1.16E4

BLAST Score
22.7 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 6

100% cov
ACJ66713

9.18% cov

Alignment Length
9 aa

Occurrence

14 times in PatSeqDB

in 3 families
in 13 documents

Tools

PatSeq Finder

SEQ ID NO

Length

Type

peptide

Locations

Detailed Description, Summary

Declared organism:
Alphapapillomavirus 13

Determined organism:

Occurrence

202 times in PatSeqDB

in 40 extended families
(7 referenced in claims)
in 49 simple families
(7 referenced in claims)
in 158 documents

Tools

PatSeq Finder

SEQ ID NO

Length

Type

peptide

Locations

Detailed Description, Summary

Declared organism:
Alphapapillomavirus 13

Determined organism:

synthetic construct
synthetic construct
Public DB hit
GI:47681307
AAT37474

Hit length
334 aa

E Value
1.1E1

BLAST Score
32.9 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 8

100% cov
AAT37474

2.69% cov

Alignment Length
9 aa

CIGAR string
9M mismatches: 0 - insertions: 0 - deletions: 0
Human papillomavirus
Human papillomavirus
Public DB hit
GI:229893622
ACQ90216

Hit length
98 aa

E Value
1.51E4

BLAST Score
22.3 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 8

100% cov
ACQ90216

9.18% cov

Alignment Length
9 aa
Human papillomavirus type 16
Human papillomavirus type 16
Public DB hit
GI:215433605
ACJ66713
1 of 6 hits reported for Human papillomavirus type 16.

Hit length
98 aa

E Value
1.53E4

BLAST Score
22.3 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 8

100% cov
ACJ66713

9.18% cov

Alignment Length
9 aa

Occurrence

23 times in PatSeqDB

in 5 families
(1 referenced in claims)
in 22 documents

Tools

PatSeq Finder

SEQ ID NO

Length

Type

peptide

Locations

Detailed Description, Summary

Declared organism:
Alphapapillomavirus 13

Determined organism:

synthetic construct
synthetic construct
Public DB hit
GI:47681309
AAT37475
1 of 3 hits reported for synthetic construct.

Hit length
301 aa

E Value
1.9E1

BLAST Score
32 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 9

100% cov
AAT37475

2.99% cov

Alignment Length
9 aa

CIGAR string
9M mismatches: 0 - insertions: 0 - deletions: 0
Human papillomavirus type 16
Human papillomavirus type 16
Public DB hit
GI:18254377
AAL66736
1 of 20 hits reported for Human papillomavirus type 16.

Hit length
98 aa

E Value
1.16E2

BLAST Score
29.5 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 9

100% cov
AAL66736

9.18% cov

Alignment Length
9 aa
Human papillomavirus
Human papillomavirus
Public DB hit
GI:229893622
ACQ90216

Hit length
98 aa

E Value
1.49E2

BLAST Score
29.1 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 9

100% cov
ACQ90216

9.18% cov

Alignment Length
9 aa

Occurrence

19 times in PatSeqDB

in 5 families
in 19 documents

Tools

PatSeq Finder

SEQ ID NO

Length

Type

peptide

Locations

Detailed Description, Summary

Declared organism:
Alphapapillomavirus 13

Determined organism:

synthetic construct
synthetic construct
Public DB hit
GI:47681309
AAT37475
1 of 4 hits reported for synthetic construct.

Hit length
301 aa

E Value
1.44E1

BLAST Score
32.5 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 10

100% cov
AAT37475

2.99% cov

Alignment Length
9 aa

CIGAR string
9M mismatches: 0 - insertions: 0 - deletions: 0
Human papillomavirus type 16
Human papillomavirus type 16
Public DB hit
GI:18254377
AAL66736
1 of 20 hits reported for Human papillomavirus type 16.

Hit length
98 aa

E Value
2.39E1

BLAST Score
31.6 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 10

100% cov
AAL66736

9.18% cov

Alignment Length
9 aa

Occurrence

13 times in PatSeqDB

in 3 families
(1 referenced in claims)
in 13 documents

Tools

PatSeq Finder

Search for Biological Sequences disclosed in Patents

25 sequences found in this patent (in total)

Displaying 1 - 10 of 25 sequences

synthetic construct

Public DB hit

Hit length

E Value

BLAST Score

Similarity

Coverage

Alignment (schematic)

Alignment Length

CIGAR string

Laccaria bicolor S238N-H82

Public DB hit

Hit length

E Value

BLAST Score

Similarity

Coverage

Alignment (schematic)

Alignment Length

Moniliophthora perniciosa FA553

Public DB hit

Hit length

E Value

BLAST Score

Similarity

Coverage

Alignment (schematic)

Alignment Length

synthetic construct

Public DB hit

Hit length

E Value

BLAST Score

Similarity

Coverage

Alignment (schematic)

Alignment Length

CIGAR string

Chaetomium globosum CBS 148.51

Public DB hit

Hit length

E Value

BLAST Score

Similarity

Coverage

Alignment (schematic)

Alignment Length

CIGAR string

synthetic construct

Public DB hit

Hit length

E Value

BLAST Score

Similarity

Coverage

Alignment (schematic)

Alignment Length

Human papillomavirus type 16

Public DB hit

Hit length

E Value

BLAST Score

Similarity

Coverage

Alignment (schematic)

Alignment Length

synthetic construct

Public DB hit

Hit length

E Value

BLAST Score

Similarity

Coverage

Alignment (schematic)

Alignment Length

CIGAR string

Human papillomavirus