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Search for Biological Sequences disclosed in Patents

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Data obtained from: DDBJ Pat NCBI GenBank USPTO Fulltext EMBL-EBI Pat
35 sequences found in this patent (in total)

Displaying 1 - 10 of 35 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
556
Type
peptide
Locations
Claims, Detailed Description, Drawings, Summary

Declared organism:
Not specified

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:4505695
      NP_002604
      1 of 2 hits reported for Homo sapiens.
    • Hit length
      556 aa
    • E Value
      0E0
    • BLAST Score
      1,161.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      NP_002604
      100% cov
    • Alignment Length
      556 aa
    • CIGAR string
      556M mismatches: 0 - insertions: 0 - deletions: 0
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:60654313
      AAX29847
    • Hit length
      557 aa
    • E Value
      0E0
    • BLAST Score
      1,161 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      AAX29847
      99.82% cov
    • Alignment Length
      556 aa
    • CIGAR string
      556M mismatches: 0 - insertions: 0 - deletions: 0
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:13592023
      NP_112343
      1 of 2 hits reported for Rattus norvegicus.
    • Hit length
      559 aa
    • E Value
      0E0
    • BLAST Score
      1,085.9 bits
    • Similarity
      96.24%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      NP_112343
      100% cov
    • Alignment Length
      559 aa
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:297489978
      XP_002697908
    • Hit length
      593 aa
    • E Value
      0E0
    • BLAST Score
      1,082.8 bits
    • Similarity
      97.63%
    • Coverage
      98.56%
    • Alignment (schematic)

      SEQ ID NO 1
      98.56% cov
      XP_002697908
      92.58% cov
    • Alignment Length
      549 aa
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:124107594
      NP_035192
      1 of 7 hits reported for Mus musculus.
    • Hit length
      559 aa
    • E Value
      0E0
    • BLAST Score
      1,074.7 bits
    • Similarity
      96.06%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      NP_035192
      100% cov
    • Alignment Length
      559 aa
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:73959463
      XP_537000
    • Hit length
      560 aa
    • E Value
      0E0
    • BLAST Score
      1,038.1 bits
    • Similarity
      95.84%
    • Coverage
      99.1%
    • Alignment (schematic)

      SEQ ID NO 1
      99.1% cov
      XP_537000
      98.75% cov
    • Alignment Length
      553 aa
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301782341
      XP_002926587
      1 of 2 hits reported for Ailuropoda melanoleuca.
    • Hit length
      556 aa
    • E Value
      0E0
    • BLAST Score
      1,034.6 bits
    • Similarity
      96%
    • Coverage
      98.56%
    • Alignment (schematic)

      SEQ ID NO 1
      98.56% cov
      XP_002926587
      98.92% cov
    • Alignment Length
      550 aa
  • Macaca fascicularis

    Macaca fascicularis

    • Public DB hit
      GI:90074974
      BAE87167
    • Hit length
      595 aa
    • E Value
      0E0
    • BLAST Score
      1,028.9 bits
    • Similarity
      98.81%
    • Coverage
      90.83%
    • Alignment (schematic)

      SEQ ID NO 1
      90.83% cov
      BAE87167
      84.87% cov
    • Alignment Length
      505 aa
  • Gallus gallus

    Gallus gallus

    • Public DB hit
      GI:60302710
      NP_001012547
    • Hit length
      556 aa
    • E Value
      0E0
    • BLAST Score
      1,021.5 bits
    • Similarity
      93.18%
    • Coverage
      99.64%
    • Alignment (schematic)

      SEQ ID NO 1
      99.64% cov
      NP_001012547
      99.82% cov
    • Alignment Length
      557 aa
Occurrence
167 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
1,670
Type
nucleotide
Locations
Detailed Description, Drawings, Summary

Declared organism:
Not specified

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:2407612
      AF017995
      1 of 12 hits reported for Homo sapiens.
    • Hit length
      1,891 bp
    • E Value
      0E0
    • BLAST Score
      3,079.5 bits
    • Similarity
      99.94%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      AF017995
      88.37% cov
    • Alignment Length
      1,671 bp
    • CIGAR string
      201MI1469M mismatches: 0 - insertions: 1 - deletions: 0
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:123997640
      DQ895496
      1 of 5 hits reported for synthetic construct.
    • Hit length
      1,711 bp
    • E Value
      0E0
    • BLAST Score
      3,070.3 bits
    • Similarity
      99.88%
    • Coverage
      99.88%
    • Alignment (schematic)

      SEQ ID NO 2
      99.88% cov
      DQ895496
      97.55% cov
    • Alignment Length
      1,669 bp
    • CIGAR string
      201MI364MN1102M2H mismatches: 1 - insertions: 1 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332845051
      XR_025259
    • Hit length
      7,095 bp
    • E Value
      0E0
    • BLAST Score
      2,920.7 bits
    • Similarity
      98.2%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XR_025259
      23.51% cov
    • Alignment Length
      1,671 bp
    • CIGAR string
      33MN17MN38MN19MIMD41MN2M2N3MN3MNMN7MN24M2DM3N2MN2MN10MN36MN113MN191MN428MN179MN302MN93MN19MN64M2N12M mismatches: 26 - insertions: 1 - deletions: 3
  • Macaca fascicularis

    Macaca fascicularis

    • Public DB hit
      GI:90074973
      AB170104
    • Hit length
      2,341 bp
    • E Value
      0E0
    • BLAST Score
      2,555 bits
    • Similarity
      97.28%
    • Coverage
      90.18%
    • Alignment (schematic)

      SEQ ID NO 2
      90.18% cov
      AB170104
      64.37% cov
    • Alignment Length
      1,508 bp
    • CIGAR string
      66H45M2N18MN15MN34MN17MIN58MN107MN5MN68MN86MN14MN20MN116MN173MN137MN2MN20MN11MN59MN69MN4MI2MD19MN10MN3M2N42MN2MN3MN58M2N70MN23MN3MN11MN31MN20MN32MN26MN34M98H mismatches: 38 - insertions: 2 - deletions: 1
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297697855
      XM_002826009
    • Hit length
      2,468 bp
    • E Value
      0E0
    • BLAST Score
      2,154.3 bits
    • Similarity
      98.92%
    • Coverage
      72.16%
    • Alignment (schematic)

      SEQ ID NO 2
      72.16% cov
      XM_002826009
      48.82% cov
    • Alignment Length
      1,205 bp
    • CIGAR string
      465H100MN320MN71MN35MN95MN74MN32MN3MN94MN86MN27MN64MN74MN117M mismatches: 13 - insertions: 0 - deletions: 0
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:297489977
      XM_002697862
    • Hit length
      1,916 bp
    • E Value
      0E0
    • BLAST Score
      2,026.9 bits
    • Similarity
      88.91%
    • Coverage
      98.62%
    • Alignment (schematic)

      SEQ ID NO 2
      98.62% cov
      XM_002697862
      86.17% cov
    • Alignment Length
      1,659 bp
    • CIGAR string
      23H7MNMN2MN5MN20MN48MI5MD3MN4MNIMIMN2MNI29MN2MN3MN4MN3MNMDMI5MN2MNMN8MDMI2MD2MIMNI2MN17MN5MN11MN2MN5MN2MN2MN2MN8MN5MN2MN11MN17MN2MN8MN11MN5MN2MN2MN2MN2MN11MN5MN17MN2MN2MN8MN8MN14MN11MN8MN2MN2MN2MN8MN38MN5MN5MN17MN2MN5MN11MN5MN5MN2M2NMN24MNMN11MN5MN5MN17MN32MN5MN14MN20MN2MN11MN5MN2MN17MN5MN2MN26MN11MN23MN2MN2MN14MN35MN11MN11MN8MN5MN2MN5MN6MN22MN11MN8MN2MN2MN2MN5MN5MN11MN6MN2MN8MN7MN2MN8MN2MN8MN6MN7MN32MN2MN20MN17M2N13MN11MN3MIMND8MN9MN2MIMND11MN11MN5MN6MN31MN5MN29M2N46MN5MN5MN2MN21MNMN12MN7MN5MN5MN2MN5MN20MD2MI15MN14MN26MN8MN8MN8MN5MN23MN2MN9MNMN14MN3MN4MDMIMN17MN2MN2MN9M mismatches: 164 - insertions: 12 - deletions: 8
Occurrence
11 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
3
Length
16
Type
peptide
Locations
Detailed Description, Summary

Declared organism:
Not specified

Determined organism:
  • Xenopus (Silurana) tropicalis

    Xenopus (Silurana) tropicalis

    • Public DB hit
      GI:301618092
      XP_002938460
      1 of 3 hits reported for Xenopus (Silurana) tropicalis.
    • Hit length
      796 aa
    • E Value
      1.37E0
    • BLAST Score
      36.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XP_002938460
      2.01% cov
    • Alignment Length
      16 aa
    • CIGAR string
      16M mismatches: 0 - insertions: 0 - deletions: 0
  • Xenopus laevis

    Xenopus laevis

    • Public DB hit
      GI:284521569
      NP_001086100
      1 of 2 hits reported for Xenopus laevis.
    • Hit length
      506 aa
    • E Value
      1.37E0
    • BLAST Score
      36.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NP_001086100
      3.16% cov
    • Alignment Length
      16 aa
    • CIGAR string
      16M mismatches: 0 - insertions: 0 - deletions: 0
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:312597396
      3NAX_A
      1 of 6 hits reported for Homo sapiens.
    • Hit length
      311 aa
    • E Value
      1.49E0
    • BLAST Score
      36.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      3NAX_A
      5.14% cov
    • Alignment Length
      16 aa
  • Saccoglossus kowalevskii

    Saccoglossus kowalevskii

    • Public DB hit
      GI:291230896
      XP_002735401
    • Hit length
      254 aa
    • E Value
      1.61E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XP_002735401
      6.3% cov
    • Alignment Length
      16 aa
  • Danio rerio

    Danio rerio

    • Public DB hit
      GI:45387813
      NP_991262
      1 of 2 hits reported for Danio rerio.
    • Hit length
      537 aa
    • E Value
      1.73E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NP_991262
      2.98% cov
    • Alignment Length
      16 aa
  • Salmo salar

    Salmo salar

    • Public DB hit
      GI:224613476
      ACN60317
    • Hit length
      391 aa
    • E Value
      1.77E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      ACN60317
      4.09% cov
    • Alignment Length
      16 aa
  • Ornithorhynchus anatinus

    Ornithorhynchus anatinus

    • Public DB hit
      GI:149426614
      XP_001518589
    • Hit length
      320 aa
    • E Value
      1.87E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XP_001518589
      5% cov
    • Alignment Length
      16 aa
  • Patiria pectinifera

    Patiria pectinifera

    • Public DB hit
      GI:38524443
      BAD02370
    • Hit length
      571 aa
    • E Value
      2.1E0
    • BLAST Score
      35.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      BAD02370
      2.8% cov
    • Alignment Length
      16 aa
  • Dicentrarchus labrax

    Dicentrarchus labrax

    • Public DB hit
      GI:317419258
      CBN81295
    • Hit length
      564 aa
    • E Value
      2.19E0
    • BLAST Score
      35.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      CBN81295
      2.84% cov
    • Alignment Length
      16 aa
  • Branchiostoma floridae

    Branchiostoma floridae

    • Public DB hit
      GI:260821545
      XP_002606093
    • Hit length
      474 aa
    • E Value
      2.24E0
    • BLAST Score
      35.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XP_002606093
      3.38% cov
    • Alignment Length
      16 aa
Occurrence
11 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
4
Length
10
Type
peptide
Locations
Detailed Description, Summary

Declared organism:
Not specified

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:310112945
      XP_003119688
      1 of 4 hits reported for Homo sapiens.
    • Hit length
      442 aa
    • E Value
      1.22E0
    • BLAST Score
      35.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_003119688
      2.26% cov
    • Alignment Length
      10 aa
    • CIGAR string
      10M mismatches: 0 - insertions: 0 - deletions: 0
  • Xenopus (Silurana) tropicalis

    Xenopus (Silurana) tropicalis

    • Public DB hit
      GI:301618092
      XP_002938460
    • Hit length
      796 aa
    • E Value
      1.27E0
    • BLAST Score
      35.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_002938460
      1.26% cov
    • Alignment Length
      10 aa
    • CIGAR string
      10M mismatches: 0 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297697856
      XP_002826055
    • Hit length
      623 aa
    • E Value
      1.33E0
    • BLAST Score
      35.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_002826055
      1.61% cov
    • Alignment Length
      10 aa
    • CIGAR string
      10M mismatches: 0 - insertions: 0 - deletions: 0
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:297489978
      XP_002697908
    • Hit length
      593 aa
    • E Value
      1.69E0
    • BLAST Score
      35.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_002697908
      1.69% cov
    • Alignment Length
      10 aa
  • Macaca fascicularis

    Macaca fascicularis

    • Public DB hit
      GI:90074974
      BAE87167
    • Hit length
      595 aa
    • E Value
      1.69E0
    • BLAST Score
      35.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      BAE87167
      1.68% cov
    • Alignment Length
      10 aa
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296219299
      XP_002755820
    • Hit length
      429 aa
    • E Value
      1.75E0
    • BLAST Score
      35.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_002755820
      2.33% cov
    • Alignment Length
      10 aa
  • Meleagris gallopavo

    Meleagris gallopavo

    • Public DB hit
      GI:326929151
      XP_003210733
    • Hit length
      735 aa
    • E Value
      2.35E0
    • BLAST Score
      35 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_003210733
      1.36% cov
    • Alignment Length
      10 aa
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:73959463
      XP_537000
    • Hit length
      560 aa
    • E Value
      2.51E0
    • BLAST Score
      35 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_537000
      1.79% cov
    • Alignment Length
      10 aa
  • Anolis carolinensis

    Anolis carolinensis

    • Public DB hit
      GI:327287180
      XP_003228307
      1 of 2 hits reported for Anolis carolinensis.
    • Hit length
      546 aa
    • E Value
      2.53E0
    • BLAST Score
      35 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_003228307
      1.83% cov
    • Alignment Length
      10 aa
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301782341
      XP_002926587
      1 of 3 hits reported for Ailuropoda melanoleuca.
    • Hit length
      556 aa
    • E Value
      2.53E0
    • BLAST Score
      35 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_002926587
      1.8% cov
    • Alignment Length
      10 aa
  • Gallus gallus

    Gallus gallus

    • Public DB hit
      GI:60302710
      NP_001012547
    • Hit length
      556 aa
    • E Value
      2.58E0
    • BLAST Score
      35 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NP_001012547
      1.8% cov
    • Alignment Length
      10 aa
Occurrence
18 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
5
Length
8
Type
peptide
Locations
Detailed Description, Summary

Declared organism:
Not specified

Determined organism:
  • Meleagris gallopavo

    Meleagris gallopavo

    • Public DB hit
      GI:326929151
      XP_003210733
    • Hit length
      735 aa
    • E Value
      5.14E1
    • BLAST Score
      30.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XP_003210733
      1.09% cov
    • Alignment Length
      8 aa
    • CIGAR string
      8M mismatches: 0 - insertions: 0 - deletions: 0
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:62089256
      BAD93072
      1 of 3 hits reported for Homo sapiens.
    • Hit length
      492 aa
    • E Value
      5.14E1
    • BLAST Score
      30.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      BAD93072
      1.63% cov
    • Alignment Length
      8 aa
    • CIGAR string
      8M mismatches: 0 - insertions: 0 - deletions: 0
  • Tetraodon nigroviridis

    Tetraodon nigroviridis

    • Public DB hit
      GI:47224460
      CAG08710
    • Hit length
      450 aa
    • E Value
      5.14E1
    • BLAST Score
      30.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      CAG08710
      1.78% cov
    • Alignment Length
      8 aa
    • CIGAR string
      8M mismatches: 0 - insertions: 0 - deletions: 0
  • Danio rerio

    Danio rerio

    • Public DB hit
      GI:66773076
      NP_001019602
    • Hit length
      481 aa
    • E Value
      5.18E1
    • BLAST Score
      30.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NP_001019602
      1.66% cov
    • Alignment Length
      8 aa
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:194678290
      XP_001788715
      1 of 2 hits reported for Bos taurus.
    • Hit length
      754 aa
    • E Value
      6.46E1
    • BLAST Score
      29.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XP_001788715
      1.06% cov
    • Alignment Length
      8 aa
  • Xenopus (Silurana) tropicalis

    Xenopus (Silurana) tropicalis

    • Public DB hit
      GI:301618092
      XP_002938460
      1 of 2 hits reported for Xenopus (Silurana) tropicalis.
    • Hit length
      796 aa
    • E Value
      7.42E1
    • BLAST Score
      29.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XP_002938460
      1.01% cov
    • Alignment Length
      8 aa
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297283291
      XP_002802410
    • Hit length
      568 aa
    • E Value
      7.69E1
    • BLAST Score
      29.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XP_002802410
      1.41% cov
    • Alignment Length
      8 aa
  • Patiria pectinifera

    Patiria pectinifera

    • Public DB hit
      GI:38524443
      BAD02370
    • Hit length
      571 aa
    • E Value
      7.69E1
    • BLAST Score
      29.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      BAD02370
      1.4% cov
    • Alignment Length
      8 aa
  • Saccoglossus kowalevskii

    Saccoglossus kowalevskii

    • Public DB hit
      GI:291239211
      XP_002739523
    • Hit length
      852 aa
    • E Value
      7.76E1
    • BLAST Score
      29.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XP_002739523
      0.94% cov
    • Alignment Length
      8 aa
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301782341
      XP_002926587
    • Hit length
      556 aa
    • E Value
      8.91E1
    • BLAST Score
      29.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XP_002926587
      1.44% cov
    • Alignment Length
      8 aa
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:13592023
      NP_112343
    • Hit length
      559 aa
    • E Value
      9.08E1
    • BLAST Score
      29.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NP_112343
      1.43% cov
    • Alignment Length
      8 aa
Occurrence
16 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
6
Length
13
Type
peptide
Locations
Summary

Declared organism:
Not specified

Determined organism:
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297283291
      XP_002802410
    • Hit length
      568 aa
    • E Value
      1.61E-3
    • BLAST Score
      45.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XP_002802410
      2.29% cov
    • Alignment Length
      13 aa
    • CIGAR string
      13M mismatches: 0 - insertions: 0 - deletions: 0
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:60654313
      AAX29847
    • Hit length
      557 aa
    • E Value
      2.35E-3
    • BLAST Score
      45.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      AAX29847
      2.33% cov
    • Alignment Length
      13 aa
    • CIGAR string
      13M mismatches: 0 - insertions: 0 - deletions: 0
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:4505695
      NP_002604
      1 of 7 hits reported for Homo sapiens.
    • Hit length
      556 aa
    • E Value
      2.46E-3
    • BLAST Score
      45.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NP_002604
      2.34% cov
    • Alignment Length
      13 aa
    • CIGAR string
      13M mismatches: 0 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297697856
      XP_002826055
    • Hit length
      623 aa
    • E Value
      2.8E-3
    • BLAST Score
      44.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XP_002826055
      2.09% cov
    • Alignment Length
      13 aa
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332239861
      XP_003269113
    • Hit length
      294 aa
    • E Value
      4.81E-3
    • BLAST Score
      43.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XP_003269113
      4.42% cov
    • Alignment Length
      13 aa
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296219299
      XP_002755820
    • Hit length
      429 aa
    • E Value
      4.9E-3
    • BLAST Score
      43.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XP_002755820
      3.03% cov
    • Alignment Length
      13 aa
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:73959463
      XP_537000
    • Hit length
      560 aa
    • E Value
      9.15E-3
    • BLAST Score
      43.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XP_537000
      2.32% cov
    • Alignment Length
      13 aa
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:297489978
      XP_002697908
    • Hit length
      593 aa
    • E Value
      2.29E-2
    • BLAST Score
      41.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XP_002697908
      2.19% cov
    • Alignment Length
      13 aa
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:281342138
      EFB17722
      1 of 2 hits reported for Ailuropoda melanoleuca.
    • Hit length
      550 aa
    • E Value
      2.06E-1
    • BLAST Score
      38.4 bits
    • Similarity
      92.31%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      EFB17722
      2.36% cov
    • Alignment Length
      13 aa
Occurrence
14 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
7
Length
12
Type
peptide
Locations
Summary

Declared organism:
Not specified

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:312597396
      3NAX_A
      1 of 9 hits reported for Homo sapiens.
    • Hit length
      311 aa
    • E Value
      9.91E-2
    • BLAST Score
      39.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      3NAX_A
      3.86% cov
    • Alignment Length
      12 aa
    • CIGAR string
      12M mismatches: 0 - insertions: 0 - deletions: 0
  • Macaca fascicularis

    Macaca fascicularis

    • Public DB hit
      GI:90074974
      BAE87167
    • Hit length
      595 aa
    • E Value
      1.78E-1
    • BLAST Score
      38.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      BAE87167
      2.02% cov
    • Alignment Length
      12 aa
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301782341
      XP_002926587
      1 of 2 hits reported for Ailuropoda melanoleuca.
    • Hit length
      556 aa
    • E Value
      2.29E-1
    • BLAST Score
      38.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XP_002926587
      2.16% cov
    • Alignment Length
      12 aa
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:21632795
      AAL47185
      1 of 7 hits reported for Mus musculus.
    • Hit length
      532 aa
    • E Value
      2.31E-1
    • BLAST Score
      38.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      AAL47185
      2.26% cov
    • Alignment Length
      12 aa
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:73959463
      XP_537000
    • Hit length
      560 aa
    • E Value
      2.37E-1
    • BLAST Score
      38.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XP_537000
      2.14% cov
    • Alignment Length
      12 aa
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:60654313
      AAX29847
    • Hit length
      557 aa
    • E Value
      2.58E-1
    • BLAST Score
      38.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      AAX29847
      2.15% cov
    • Alignment Length
      12 aa
Occurrence
11 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
8
Length
11
Type
peptide
Locations
Summary

Declared organism:
Not specified

Determined organism:
  • Foot-and-mouth disease virus (strain O1)

    Foot-and-mouth disease virus (strain O1)

    • Public DB hit
      GI:130448
      P03305
    • Hit length
      2,332 aa
    • E Value
      1.22E1
    • BLAST Score
      32.9 bits
    • Similarity
      100%
    • Coverage
      90.91%
    • Alignment (schematic)

      SEQ ID NO 8
      90.91% cov
      P03305
      0.43% cov
    • Alignment Length
      10 aa
    • CIGAR string
      10M1H mismatches: 0 - insertions: 0 - deletions: 0
  • Foot-and-mouth disease virus

    Foot-and-mouth disease virus

    • Public DB hit
      GI:1335422
      CAA25417
    • Hit length
      720 aa
    • E Value
      4.77E1
    • BLAST Score
      30.8 bits
    • Similarity
      100%
    • Coverage
      90.91%
    • Alignment (schematic)

      SEQ ID NO 8
      90.91% cov
      CAA25417
      1.39% cov
    • Alignment Length
      10 aa
    • CIGAR string
      10M1H mismatches: 0 - insertions: 0 - deletions: 0
  • Foot-and-mouth disease virus - type O

    Foot-and-mouth disease virus - type O

    • Public DB hit
      GI:21426908
      NP_658990
      1 of 13 hits reported for Foot-and-mouth disease virus - type O.
    • Hit length
      2,322 aa
    • E Value
      2.21E2
    • BLAST Score
      28.6 bits
    • Similarity
      90%
    • Coverage
      90.91%
    • Alignment (schematic)

      SEQ ID NO 8
      90.91% cov
      NP_658990
      0.43% cov
    • Alignment Length
      10 aa
    • CIGAR string
      3MN6M1H mismatches: 1 - insertions: 0 - deletions: 0
  • Foot-and-mouth disease virus - type A

    Foot-and-mouth disease virus - type A

    • Public DB hit
      GI:332377447
      AEE65045
      1 of 9 hits reported for Foot-and-mouth disease virus - type A.
    • Hit length
      2,333 aa
    • E Value
      2.21E2
    • BLAST Score
      28.6 bits
    • Similarity
      90%
    • Coverage
      90.91%
    • Alignment (schematic)

      SEQ ID NO 8
      90.91% cov
      AEE65045
      0.43% cov
    • Alignment Length
      10 aa
  • Foot-and-mouth disease virus O/HK/2001

    Foot-and-mouth disease virus O/HK/2001

    • Public DB hit
      GI:166850550
      ABY91241
    • Hit length
      2,322 aa
    • E Value
      2.21E2
    • BLAST Score
      28.6 bits
    • Similarity
      90%
    • Coverage
      90.91%
    • Alignment (schematic)

      SEQ ID NO 8
      90.91% cov
      ABY91241
      0.43% cov
    • Alignment Length
      10 aa
Occurrence
38 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
9
Length
7
Type
peptide
Locations
Detailed Description, Summary

Declared organism:
Not specified

Determined organism:
  • Trichoplax adhaerens

    Trichoplax adhaerens

    • Public DB hit
      GI:196007724
      XP_002113728
    • Hit length
      697 aa
    • E Value
      2.94E3
    • BLAST Score
      24.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XP_002113728
      1% cov
    • Alignment Length
      7 aa
    • CIGAR string
      7M mismatches: 0 - insertions: 0 - deletions: 0
  • Methylococcus capsulatus str. Bath

    Methylococcus capsulatus str. Bath

    • Public DB hit
      GI:53804363
      YP_113741
    • Hit length
      329 aa
    • E Value
      4.74E3
    • BLAST Score
      23.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      YP_113741
      2.13% cov
    • Alignment Length
      7 aa
    • CIGAR string
      7M mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
68 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
10
Length
20
Type
peptide
Locations
Detailed Description

Declared organism:
Not specified

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:189053176
      BAG34798
      1 of 4 hits reported for Homo sapiens.
    • Hit length
      76 aa
    • E Value
      2.75E-3
    • BLAST Score
      45.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      BAG34798
      26.32% cov
    • Alignment Length
      20 aa
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:530223
      AAA72716
    • Hit length
      77 aa
    • E Value
      2.89E-3
    • BLAST Score
      45.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      AAA72716
      25.97% cov
    • Alignment Length
      20 aa
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:83035109
      NP_001032709
    • Hit length
      76 aa
    • E Value
      2.92E-3
    • BLAST Score
      45.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      NP_001032709
      26.32% cov
    • Alignment Length
      20 aa
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:6679359
      NP_032888
      1 of 2 hits reported for Mus musculus.
    • Hit length
      76 aa
    • E Value
      3.36E-3
    • BLAST Score
      45.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      NP_032888
      26.32% cov
    • Alignment Length
      20 aa
  • Monodelphis domestica

    Monodelphis domestica

    • Public DB hit
      GI:126321017
      XP_001367435
    • Hit length
      76 aa
    • E Value
      4.86E-3
    • BLAST Score
      45.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XP_001367435
      26.32% cov
    • Alignment Length
      20 aa
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:281347410
      EFB22994
    • Hit length
      50 aa
    • E Value
      5.88E-3
    • BLAST Score
      44.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      EFB22994
      40% cov
    • Alignment Length
      20 aa
  • Anolis carolinensis

    Anolis carolinensis

    • Public DB hit
      GI:327269648
      XP_003219605
    • Hit length
      76 aa
    • E Value
      1.33E-2
    • BLAST Score
      43.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XP_003219605
      26.32% cov
    • Alignment Length
      20 aa
  • Ornithorhynchus anatinus

    Ornithorhynchus anatinus

    • Public DB hit
      GI:149417793
      XP_001521253
    • Hit length
      76 aa
    • E Value
      1.47E-2
    • BLAST Score
      43.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XP_001521253
      26.32% cov
    • Alignment Length
      20 aa
  • Gallus gallus

    Gallus gallus

    • Public DB hit
      GI:4835897
      AAD30289
      1 of 2 hits reported for Gallus gallus.
    • Hit length
      50 aa
    • E Value
      1.97E-2
    • BLAST Score
      43.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      AAD30289
      40% cov
    • Alignment Length
      20 aa
  • Xenopus (Silurana) tropicalis

    Xenopus (Silurana) tropicalis

    • Public DB hit
      GI:71896189
      NP_001025580
    • Hit length
      76 aa
    • E Value
      4.47E-2
    • BLAST Score
      42 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      NP_001025580
      26.32% cov
    • Alignment Length
      20 aa
  • Taeniopygia guttata

    Taeniopygia guttata

    • Public DB hit
      GI:224046405
      XP_002199563
    • Hit length
      76 aa
    • E Value
      2.58E-1
    • BLAST Score
      39.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XP_002199563
      26.32% cov
    • Alignment Length
      20 aa
Occurrence
53 times in PatSeqDB
Tools
PatSeq Finder

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