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Search for Biological Sequences disclosed in Patents

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Data obtained from: DDBJ Pat NCBI GenBank USPTO Fulltext EMBL-EBI Pat
59 sequences found in this patent (in total)

Displaying 1 - 10 of 59 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
42
Type
peptide
Locations
Summary

Declared organism:
Not specified

Determined organism:
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:335302137
      XP_003359388
    • Hit length
      488 aa
    • E Value
      1.03E-16
    • BLAST Score
      90.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XP_003359388
      8.61% cov
    • Alignment Length
      42 aa
    • CIGAR string
      42M mismatches: 0 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:207080208
      NP_001128840
      1 of 3 hits reported for Pongo abelii.
    • Hit length
      409 aa
    • E Value
      1.06E-16
    • BLAST Score
      90.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      NP_001128840
      10.27% cov
    • Alignment Length
      42 aa
    • CIGAR string
      42M mismatches: 0 - insertions: 0 - deletions: 0
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296221048
      XP_002756584
    • Hit length
      569 aa
    • E Value
      1.1E-16
    • BLAST Score
      90.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XP_002756584
      7.38% cov
    • Alignment Length
      42 aa
    • CIGAR string
      42M mismatches: 0 - insertions: 0 - deletions: 0
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:189066663
      BAG36210
      1 of 5 hits reported for Homo sapiens.
    • Hit length
      569 aa
    • E Value
      1.11E-16
    • BLAST Score
      90.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      BAG36210
      7.38% cov
    • Alignment Length
      42 aa
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:4140718
      AAD04181
      1 of 6 hits reported for Mus musculus.
    • Hit length
      569 aa
    • E Value
      1.11E-16
    • BLAST Score
      90.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      AAD04181
      7.38% cov
    • Alignment Length
      42 aa
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332212615
      XP_003255415
      1 of 3 hits reported for Nomascus leucogenys.
    • Hit length
      569 aa
    • E Value
      1.13E-16
    • BLAST Score
      90.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XP_003255415
      7.38% cov
    • Alignment Length
      42 aa
  • Taeniopygia guttata

    Taeniopygia guttata

    • Public DB hit
      GI:224052707
      XP_002192900
    • Hit length
      680 aa
    • E Value
      1.17E-16
    • BLAST Score
      90.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XP_002192900
      6.18% cov
    • Alignment Length
      42 aa
Occurrence
3 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
126
Type
nucleotide
Locations
Claims, Summary

Declared organism:
Not specified

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:156071488
      NM_003939
      1 of 16 hits reported for Homo sapiens.
    • Hit length
      6,013 bp
    • E Value
      1.6E-58
    • BLAST Score
      233.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NM_003939
      2.1% cov
    • Alignment Length
      126 bp
    • CIGAR string
      126M mismatches: 0 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:207080207
      NM_001135368
      1 of 4 hits reported for Pongo abelii.
    • Hit length
      2,188 bp
    • E Value
      1.6E-58
    • BLAST Score
      233.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NM_001135368
      5.76% cov
    • Alignment Length
      126 bp
    • CIGAR string
      126M mismatches: 0 - insertions: 0 - deletions: 0
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:325463320
      JF432214
      1 of 2 hits reported for synthetic construct.
    • Hit length
      1,917 bp
    • E Value
      1.6E-58
    • BLAST Score
      233.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      JF432214
      6.57% cov
    • Alignment Length
      126 bp
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332212616
      XM_003255368
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      6,008 bp
    • E Value
      3.46E-55
    • BLAST Score
      222.7 bits
    • Similarity
      98.41%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XM_003255368
      2.1% cov
    • Alignment Length
      126 bp
Occurrence
3 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
3
Length
38
Type
peptide
Locations
Detailed Description, Summary

Declared organism:
Not specified

Determined organism:
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296228320
      XP_002807717
    • Hit length
      426 aa
    • E Value
      8.48E-14
    • BLAST Score
      80.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XP_002807717
      8.92% cov
    • Alignment Length
      38 aa
    • CIGAR string
      38M mismatches: 0 - insertions: 0 - deletions: 0
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:74200920
      BAE37357
      1 of 3 hits reported for Mus musculus.
    • Hit length
      423 aa
    • E Value
      8.48E-14
    • BLAST Score
      80.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      BAE37357
      8.98% cov
    • Alignment Length
      38 aa
    • CIGAR string
      38M mismatches: 0 - insertions: 0 - deletions: 0
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:7022695
      BAA91691
      1 of 9 hits reported for Homo sapiens.
    • Hit length
      423 aa
    • E Value
      8.77E-14
    • BLAST Score
      80.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      BAA91691
      8.98% cov
    • Alignment Length
      38 aa
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:197098444
      NP_001127056
    • Hit length
      423 aa
    • E Value
      8.84E-14
    • BLAST Score
      80.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NP_001127056
      8.98% cov
    • Alignment Length
      38 aa
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:293349515
      XP_001076670
      1 of 2 hits reported for Rattus norvegicus.
    • Hit length
      423 aa
    • E Value
      9.3E-14
    • BLAST Score
      80.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XP_001076670
      8.98% cov
    • Alignment Length
      38 aa
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:149643041
      NP_001092623
    • Hit length
      423 aa
    • E Value
      9.86E-14
    • BLAST Score
      80.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NP_001092623
      8.98% cov
    • Alignment Length
      38 aa
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:73990001
      XP_542692
    • Hit length
      492 aa
    • E Value
      1.3E-13
    • BLAST Score
      80.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XP_542692
      7.72% cov
    • Alignment Length
      38 aa
Occurrence
3 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
4
Length
114
Type
nucleotide
Locations
Detailed Description, Summary

Declared organism:
Not specified

Determined organism:
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332816368
      XM_003309686
      1 of 4 hits reported for Pan troglodytes.
    • Hit length
      2,791 bp
    • E Value
      6.63E-52
    • BLAST Score
      211.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XM_003309686
      4.08% cov
    • Alignment Length
      114 bp
    • CIGAR string
      114M mismatches: 0 - insertions: 0 - deletions: 0
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297287107
      XM_001098467
      1 of 2 hits reported for Macaca mulatta.
    • Hit length
      1,799 bp
    • E Value
      6.63E-52
    • BLAST Score
      211.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XM_001098467
      6.34% cov
    • Alignment Length
      114 bp
    • CIGAR string
      114M mismatches: 0 - insertions: 0 - deletions: 0
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:284447313
      NM_001171713
      1 of 13 hits reported for Homo sapiens.
    • Hit length
      2,793 bp
    • E Value
      6.63E-52
    • BLAST Score
      211.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NM_001171713
      4.08% cov
    • Alignment Length
      114 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:197098443
      NM_001133584
      1 of 2 hits reported for Pongo abelii.
    • Hit length
      3,787 bp
    • E Value
      6.63E-52
    • BLAST Score
      211.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NM_001133584
      3.01% cov
    • Alignment Length
      114 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:168742682
      CU689178
      1 of 3 hits reported for synthetic construct.
    • Hit length
      1,014 bp
    • E Value
      6.63E-52
    • BLAST Score
      211.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      CU689178
      11.24% cov
    • Alignment Length
      114 bp
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332215496
      XM_003256833
    • Hit length
      2,768 bp
    • E Value
      3.09E-50
    • BLAST Score
      206.1 bits
    • Similarity
      99.12%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XM_003256833
      4.12% cov
    • Alignment Length
      114 bp
Occurrence
3 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
5
Length
38
Type
peptide
Locations
Summary

Declared organism:
Not specified

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:189053650
      BAG35902
      1 of 5 hits reported for Homo sapiens.
    • Hit length
      621 aa
    • E Value
      1.34E-13
    • BLAST Score
      80.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      BAG35902
      6.12% cov
    • Alignment Length
      38 aa
    • CIGAR string
      38M mismatches: 0 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297678735
      XP_002817220
      1 of 2 hits reported for Pongo abelii.
    • Hit length
      621 aa
    • E Value
      1.39E-13
    • BLAST Score
      80.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XP_002817220
      6.12% cov
    • Alignment Length
      38 aa
    • CIGAR string
      38M mismatches: 0 - insertions: 0 - deletions: 0
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296198832
      XP_002746898
      1 of 2 hits reported for Callithrix jacchus.
    • Hit length
      621 aa
    • E Value
      1.39E-13
    • BLAST Score
      80.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XP_002746898
      6.12% cov
    • Alignment Length
      38 aa
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:114608575
      XP_001136579
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      621 aa
    • E Value
      1.41E-13
    • BLAST Score
      80.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XP_001136579
      6.12% cov
    • Alignment Length
      38 aa
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332218533
      XP_003258410
    • Hit length
      621 aa
    • E Value
      1.42E-13
    • BLAST Score
      80.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XP_003258410
      6.12% cov
    • Alignment Length
      38 aa
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:109072131
      XP_001082137
    • Hit length
      621 aa
    • E Value
      1.47E-13
    • BLAST Score
      80.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XP_001082137
      6.12% cov
    • Alignment Length
      38 aa
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:115497022
      NP_001069527
      1 of 2 hits reported for Bos taurus.
    • Hit length
      621 aa
    • E Value
      3.14E-13
    • BLAST Score
      79.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NP_001069527
      6.12% cov
    • Alignment Length
      38 aa
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:284795274
      NP_001165223
    • Hit length
      621 aa
    • E Value
      3.56E-13
    • BLAST Score
      79 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NP_001165223
      6.12% cov
    • Alignment Length
      38 aa
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301773220
      XP_002922029
      1 of 2 hits reported for Ailuropoda melanoleuca.
    • Hit length
      621 aa
    • E Value
      3.62E-13
    • BLAST Score
      79 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XP_002922029
      6.12% cov
    • Alignment Length
      38 aa
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:149722821
      XP_001503907
    • Hit length
      621 aa
    • E Value
      3.68E-13
    • BLAST Score
      79 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XP_001503907
      6.12% cov
    • Alignment Length
      38 aa
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:73973544
      XP_868129
    • Hit length
      657 aa
    • E Value
      3.81E-13
    • BLAST Score
      79 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XP_868129
      5.78% cov
    • Alignment Length
      38 aa
Occurrence
3 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
6
Length
71
Type
nucleotide
Locations
Summary

Declared organism:
Not specified

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:21536437
      NM_012160
      1 of 8 hits reported for Homo sapiens.
    • Hit length
      2,777 bp
    • E Value
      2.59E-28
    • BLAST Score
      132.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NM_012160
      2.56% cov
    • Alignment Length
      71 bp
    • CIGAR string
      71M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332218534
      XM_003258363
      1 of 4 hits reported for Nomascus leucogenys.
    • Hit length
      2,839 bp
    • E Value
      1.21E-26
    • BLAST Score
      126.7 bits
    • Similarity
      98.59%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_003258363
      2.5% cov
    • Alignment Length
      71 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297678736
      XM_002817175
      1 of 4 hits reported for Pongo abelii.
    • Hit length
      3,051 bp
    • E Value
      1.21E-26
    • BLAST Score
      126.7 bits
    • Similarity
      98.59%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_002817175
      2.33% cov
    • Alignment Length
      71 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297291393
      XM_001082269
      1 of 4 hits reported for Macaca mulatta.
    • Hit length
      2,781 bp
    • E Value
      1.21E-26
    • BLAST Score
      126.7 bits
    • Similarity
      98.59%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_001082269
      2.55% cov
    • Alignment Length
      71 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296198831
      XM_002746852
      1 of 2 hits reported for Callithrix jacchus.
    • Hit length
      2,646 bp
    • E Value
      1.21E-26
    • BLAST Score
      126.7 bits
    • Similarity
      98.59%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_002746852
      2.68% cov
    • Alignment Length
      71 bp
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:114608576
      XM_518648
      1 of 3 hits reported for Pan troglodytes.
    • Hit length
      3,049 bp
    • E Value
      1.21E-26
    • BLAST Score
      126.7 bits
    • Similarity
      98.59%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_518648
      2.33% cov
    • Alignment Length
      71 bp
Occurrence
3 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
7
Length
38
Type
peptide
Locations
Summary

Declared organism:
Not specified

Determined organism:
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:149045530
      EDL98530
      1 of 2 hits reported for Rattus norvegicus.
    • Hit length
      506 aa
    • E Value
      7.12E-14
    • BLAST Score
      81.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      EDL98530
      7.51% cov
    • Alignment Length
      38 aa
    • CIGAR string
      38M mismatches: 0 - insertions: 0 - deletions: 0
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:27370492
      NP_766576
      1 of 4 hits reported for Mus musculus.
    • Hit length
      621 aa
    • E Value
      9.14E-14
    • BLAST Score
      80.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NP_766576
      6.12% cov
    • Alignment Length
      38 aa
    • CIGAR string
      38M mismatches: 0 - insertions: 0 - deletions: 0
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:115497022
      NP_001069527
      1 of 2 hits reported for Bos taurus.
    • Hit length
      621 aa
    • E Value
      1.52E-12
    • BLAST Score
      77 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NP_001069527
      6.12% cov
    • Alignment Length
      38 aa
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:284795274
      NP_001165223
    • Hit length
      621 aa
    • E Value
      1.84E-12
    • BLAST Score
      76.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NP_001165223
      6.12% cov
    • Alignment Length
      38 aa
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:73973544
      XP_868129
      1 of 2 hits reported for Canis lupus familiaris.
    • Hit length
      657 aa
    • E Value
      1.86E-12
    • BLAST Score
      76.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XP_868129
      5.78% cov
    • Alignment Length
      38 aa
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301773220
      XP_002922029
    • Hit length
      621 aa
    • E Value
      1.95E-12
    • BLAST Score
      76.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XP_002922029
      6.12% cov
    • Alignment Length
      38 aa
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:149722821
      XP_001503907
    • Hit length
      621 aa
    • E Value
      1.97E-12
    • BLAST Score
      76.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XP_001503907
      6.12% cov
    • Alignment Length
      38 aa
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:6103637
      AAF03699
      1 of 3 hits reported for Homo sapiens.
    • Hit length
      621 aa
    • E Value
      2.49E-12
    • BLAST Score
      76.3 bits
    • Similarity
      97.37%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      AAF03699
      6.12% cov
    • Alignment Length
      38 aa
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296198832
      XP_002746898
      1 of 2 hits reported for Callithrix jacchus.
    • Hit length
      621 aa
    • E Value
      2.59E-12
    • BLAST Score
      76.3 bits
    • Similarity
      97.37%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XP_002746898
      6.12% cov
    • Alignment Length
      38 aa
Occurrence
3 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
8
Length
114
Type
nucleotide
Locations
Summary

Declared organism:
Not specified

Determined organism:
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:146198581
      NM_172988
      1 of 6 hits reported for Mus musculus.
    • Hit length
      2,479 bp
    • E Value
      6.63E-52
    • BLAST Score
      211.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NM_172988
      4.6% cov
    • Alignment Length
      114 bp
    • CIGAR string
      114M mismatches: 0 - insertions: 0 - deletions: 0
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:171846572
      BC161859
    • Hit length
      2,523 bp
    • E Value
      1.45E-43
    • BLAST Score
      183.9 bits
    • Similarity
      95.61%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      BC161859
      4.52% cov
    • Alignment Length
      114 bp
  • Oryctolagus cuniculus

    Oryctolagus cuniculus

    • Public DB hit
      GI:295851205
      XR_085146
      1 of 2 hits reported for Oryctolagus cuniculus.
    • Hit length
      2,243 bp
    • E Value
      1.13E-34
    • BLAST Score
      154.4 bits
    • Similarity
      91.82%
    • Coverage
      96.49%
    • Alignment (schematic)

      SEQ ID NO 8
      96.49% cov
      XR_085146
      4.9% cov
    • Alignment Length
      110 bp
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:115497021
      NM_001076059
      1 of 2 hits reported for Bos taurus.
    • Hit length
      2,587 bp
    • E Value
      1.13E-34
    • BLAST Score
      154.4 bits
    • Similarity
      91.82%
    • Coverage
      96.49%
    • Alignment (schematic)

      SEQ ID NO 8
      96.49% cov
      NM_001076059
      4.25% cov
    • Alignment Length
      110 bp
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:284795273
      NM_001171752
    • Hit length
      2,384 bp
    • E Value
      5.27E-33
    • BLAST Score
      148.9 bits
    • Similarity
      90.91%
    • Coverage
      96.49%
    • Alignment (schematic)

      SEQ ID NO 8
      96.49% cov
      NM_001171752
      4.61% cov
    • Alignment Length
      110 bp
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:73973543
      XM_863036
      1 of 4 hits reported for Canis lupus familiaris.
    • Hit length
      1,974 bp
    • E Value
      1.14E-29
    • BLAST Score
      137.8 bits
    • Similarity
      89.72%
    • Coverage
      93.86%
    • Alignment (schematic)

      SEQ ID NO 8
      93.86% cov
      XM_863036
      5.42% cov
    • Alignment Length
      107 bp
Occurrence
3 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
9
Length
38
Type
peptide
Locations
Summary

Declared organism:
Not specified

Determined organism:
  • Oryctolagus cuniculus

    Oryctolagus cuniculus

    • Public DB hit
      GI:291384806
      XP_002709261
    • Hit length
      405 aa
    • E Value
      4.85E-15
    • BLAST Score
      85.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XP_002709261
      9.38% cov
    • Alignment Length
      38 aa
    • CIGAR string
      38M mismatches: 0 - insertions: 0 - deletions: 0
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:109106840
      XP_001082360
    • Hit length
      471 aa
    • E Value
      4.97E-15
    • BLAST Score
      85.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XP_001082360
      8.07% cov
    • Alignment Length
      38 aa
    • CIGAR string
      38M mismatches: 0 - insertions: 0 - deletions: 0
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:15812186
      NP_036307
      1 of 4 hits reported for Homo sapiens.
    • Hit length
      471 aa
    • E Value
      5.01E-15
    • BLAST Score
      85.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      NP_036307
      8.07% cov
    • Alignment Length
      38 aa
    • CIGAR string
      38M mismatches: 0 - insertions: 0 - deletions: 0
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296217873
      XP_002755207
    • Hit length
      471 aa
    • E Value
      5.1E-15
    • BLAST Score
      85.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XP_002755207
      8.07% cov
    • Alignment Length
      38 aa
  • Macaca fascicularis

    Macaca fascicularis

    • Public DB hit
      GI:90079141
      BAE89250
    • Hit length
      471 aa
    • E Value
      5.1E-15
    • BLAST Score
      85.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      BAE89250
      8.07% cov
    • Alignment Length
      38 aa
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:197099826
      NP_001127325
      1 of 2 hits reported for Pongo abelii.
    • Hit length
      430 aa
    • E Value
      1.28E-13
    • BLAST Score
      80.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      NP_001127325
      8.84% cov
    • Alignment Length
      38 aa
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:149773578
      NP_001092532
      1 of 2 hits reported for Bos taurus.
    • Hit length
      469 aa
    • E Value
      1.28E-13
    • BLAST Score
      80.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      NP_001092532
      8.1% cov
    • Alignment Length
      38 aa
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:73982195
      XP_849256
      1 of 2 hits reported for Canis lupus familiaris.
    • Hit length
      471 aa
    • E Value
      1.31E-13
    • BLAST Score
      80.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XP_849256
      8.07% cov
    • Alignment Length
      38 aa
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:311248011
      XP_003122924
    • Hit length
      471 aa
    • E Value
      1.34E-13
    • BLAST Score
      80.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XP_003122924
      8.07% cov
    • Alignment Length
      38 aa
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301764240
      XP_002917542
    • Hit length
      522 aa
    • E Value
      1.65E-13
    • BLAST Score
      80.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XP_002917542
      7.28% cov
    • Alignment Length
      38 aa
Occurrence
7 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
10
Length
114
Type
nucleotide
Locations
Summary

Declared organism:
Not specified

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:48928041
      NM_012175
      1 of 12 hits reported for Homo sapiens.
    • Hit length
      2,408 bp
    • E Value
      6.63E-52
    • BLAST Score
      211.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      NM_012175
      4.73% cov
    • Alignment Length
      114 bp
    • CIGAR string
      114M mismatches: 0 - insertions: 0 - deletions: 0
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:190691612
      EU832324
      1 of 3 hits reported for synthetic construct.
    • Hit length
      1,459 bp
    • E Value
      6.63E-52
    • BLAST Score
      211.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      EU832324
      7.81% cov
    • Alignment Length
      114 bp
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332836403
      XM_508358
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      2,735 bp
    • E Value
      3.09E-50
    • BLAST Score
      206.1 bits
    • Similarity
      99.12%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XM_508358
      4.17% cov
    • Alignment Length
      114 bp
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332210672
      XM_003254386
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      2,734 bp
    • E Value
      3.09E-50
    • BLAST Score
      206.1 bits
    • Similarity
      99.12%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XM_003254386
      4.17% cov
    • Alignment Length
      114 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:197099825
      NM_001133853
      1 of 2 hits reported for Pongo abelii.
    • Hit length
      3,226 bp
    • E Value
      3.09E-50
    • BLAST Score
      206.1 bits
    • Similarity
      99.12%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      NM_001133853
      3.53% cov
    • Alignment Length
      114 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296217872
      XM_002755161
    • Hit length
      2,384 bp
    • E Value
      1.44E-48
    • BLAST Score
      200.6 bits
    • Similarity
      98.25%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XM_002755161
      4.78% cov
    • Alignment Length
      114 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297268137
      XM_001082360
    • Hit length
      2,434 bp
    • E Value
      3.11E-45
    • BLAST Score
      189.5 bits
    • Similarity
      96.49%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XM_001082360
      4.68% cov
    • Alignment Length
      114 bp
Occurrence
3 times in PatSeqDB
Tools
PatSeq Finder

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