Methods Of Screening For Gastrointestinal Cancer

  • Published: Oct 12, 2010
  • Earliest Priority: Sep 06 2006
  • Family: 8
  • Cited Works: 56
  • Cited by: 4
  • Cites: 16
  • Sequences: 18
  • Additional Info: Cited Works Full text
Data obtained from: EMBL-EBI Pat DDBJ Pat USPTO Fulltext NCBI GenBank
18 sequences found in this patent (in total)

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Download sequences in fasta format: 18 nucleotides

Displaying 1 - 10 of 18 sequences

SEQ ID NO
Length
Sequence Type
Locations
Declared organism
Determined organism
Occurrence
Tools
SEQ ID NO
1
Length
20
Sequence Type
nucleotide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:309273016
      XM_001476707
      1 of 25 hits reported for Mus musculus.
    • Hit length
      1,233 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XM_001476707
      1.62% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
6 times in PatSeqDB
Tools
SEQ ID NO
2
Length
21
Sequence Type
nucleotide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:309273016
      XM_001476707
      1 of 22 hits reported for Mus musculus.
    • Hit length
      1,233 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XM_001476707
      1.7% cov
    • Alignment Length
      21 bp
    • CIGAR string
      21M mismatches: 0 - insertions: 0 - deletions: 0
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:73989068
      XM_534110
      1 of 3 hits reported for Canis lupus familiaris.
    • Hit length
      1,094 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XM_534110
      1.92% cov
    • Alignment Length
      21 bp
Occurrence
12 times in PatSeqDB
Tools
SEQ ID NO
3
Length
21
Sequence Type
nucleotide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:300796791
      NM_001191805
      1 of 6 hits reported for Rattus norvegicus.
    • Hit length
      2,918 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NM_001191805
      0.72% cov
    • Alignment Length
      21 bp
    • CIGAR string
      21M mismatches: 0 - insertions: 0 - deletions: 0
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:118130774
      NM_008563
      1 of 13 hits reported for Mus musculus.
    • Hit length
      2,886 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NM_008563
      0.73% cov
    • Alignment Length
      21 bp
    • CIGAR string
      21M mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
5 times in PatSeqDB
Tools
SEQ ID NO
4
Length
16
Sequence Type
nucleotide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
Occurrence
5 times in PatSeqDB
Tools
SEQ ID NO
5
Length
21
Sequence Type
nucleotide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:157823052
      NM_001106170
      1 of 3 hits reported for Rattus norvegicus.
    • Hit length
      2,528 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NM_001106170
      0.83% cov
    • Alignment Length
      21 bp
    • CIGAR string
      21M mismatches: 0 - insertions: 0 - deletions: 0
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:112293272
      NM_008566
      1 of 10 hits reported for Mus musculus.
    • Hit length
      3,422 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NM_008566
      0.61% cov
    • Alignment Length
      21 bp
    • CIGAR string
      21M mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
5 times in PatSeqDB
Tools
SEQ ID NO
6
Length
21
Sequence Type
nucleotide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:157823052
      NM_001106170
      1 of 3 hits reported for Rattus norvegicus.
    • Hit length
      2,528 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NM_001106170
      0.83% cov
    • Alignment Length
      21 bp
    • CIGAR string
      21M mismatches: 0 - insertions: 0 - deletions: 0
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:112293272
      NM_008566
      1 of 10 hits reported for Mus musculus.
    • Hit length
      3,422 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NM_008566
      0.61% cov
    • Alignment Length
      21 bp
    • CIGAR string
      21M mismatches: 0 - insertions: 0 - deletions: 0
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301780409
      XM_002925575
      1 of 2 hits reported for Ailuropoda melanoleuca.
    • Hit length
      2,192 bp
    • E Value
      6.21E0
    • BLAST Score
      34.2 bits
    • Similarity
      95.24%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_002925575
      0.96% cov
    • Alignment Length
      21 bp
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:115497039
      NM_001075290
      1 of 3 hits reported for Bos taurus.
    • Hit length
      2,392 bp
    • E Value
      6.21E0
    • BLAST Score
      34.2 bits
    • Similarity
      95.24%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NM_001075290
      0.88% cov
    • Alignment Length
      21 bp
Occurrence
5 times in PatSeqDB
Tools
SEQ ID NO
7
Length
20
Sequence Type
nucleotide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:118130733
      NM_008568
      1 of 17 hits reported for Mus musculus.
    • Hit length
      2,396 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NM_008568
      0.83% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Mus musculus domesticus

    Mus musculus domesticus

    • Public DB hit
      GI:1136746
      D26091
    • Hit length
      2,396 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      D26091
      0.83% cov
    • Alignment Length
      20 bp
Occurrence
5 times in PatSeqDB
Tools
SEQ ID NO
8
Length
21
Sequence Type
nucleotide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:118130733
      NM_008568
      1 of 20 hits reported for Mus musculus.
    • Hit length
      2,396 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NM_008568
      0.88% cov
    • Alignment Length
      21 bp
    • CIGAR string
      21M mismatches: 0 - insertions: 0 - deletions: 0
  • Mus musculus domesticus

    Mus musculus domesticus

    • Public DB hit
      GI:1136746
      D26091
    • Hit length
      2,396 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      D26091
      0.88% cov
    • Alignment Length
      21 bp
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:148747274
      NM_001004203
      1 of 4 hits reported for Rattus norvegicus.
    • Hit length
      2,357 bp
    • E Value
      1.01E-1
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      95.24%
    • Alignment (schematic)

      SEQ ID NO 8
      95.24% cov
      NM_001004203
      0.85% cov
    • Alignment Length
      20 bp
Occurrence
5 times in PatSeqDB
Tools
SEQ ID NO
9
Length
21
Sequence Type
nucleotide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:118130739
      NM_018784
      1 of 12 hits reported for Mus musculus.
    • Hit length
      1,593 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      NM_018784
      1.32% cov
    • Alignment Length
      21 bp
    • CIGAR string
      21M mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
5 times in PatSeqDB
Tools
SEQ ID NO
10
Length
20
Sequence Type
nucleotide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:118130739
      NM_018784
      1 of 12 hits reported for Mus musculus.
    • Hit length
      1,593 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      NM_018784
      1.26% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
5 times in PatSeqDB
Tools

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