US 6265560 B1 - Human Ste20-like Stress Activated Serine/threonine Kinase - The Lens

Human Ste20-like Stress Activated Serine/threonine Kinase

Published: Jul 24, 2001
Earliest Priority: Sep 19 1997
Family: 7
Cited Works: 24
Cited by: 1
Cites: 1
Sequences: 9
Additional Info: Cited Works Full text Published Sequence

Data obtained from: USPTO Fulltext

9 sequences found in this patent (in total)

Download sequences in fasta format: 2 peptides 7 DNAs

Displaying 9 sequences

SEQ ID NO

Length

Sequence Type

Locations

Declared organism

Determined organism

Occurrence

Tools

SEQ ID NO

Length

2,322

Sequence Type

DNA

Locations

Detailed Description, Drawings, Summary

Declared organism

Homo sapiens

Determined organism

Homo sapiens
Homo sapiens
Public DB hit
GI:23274190
BC035578
1 of 8 hits reported for Homo sapiens.

Hit length
2,640 bp

E Value
0E0

BLAST Score
4,283.5 bits

Similarity

99.96%

Coverage

100%

Alignment (schematic)

SEQ ID NO 1

100% cov
BC035578

87.95% cov

Alignment Length
2,322 bp

CIGAR string
2040MN281M mismatches: 1 - insertions: 0 - deletions: 0
Pan troglodytes
Pan troglodytes
Public DB hit
GI:114650409
XM_001144072

Hit length
4,566 bp

E Value
0E0

BLAST Score
4,095.1 bits

Similarity

99.21%

Coverage

97.85%

Alignment (schematic)

SEQ ID NO 1

97.85% cov
XM_001144072

49.74% cov

Alignment Length
2,273 bp
Nomascus leucogenys
Nomascus leucogenys
Public DB hit
GI:332260359
XM_003279208
1 of 2 hits reported for Nomascus leucogenys.

Hit length
4,300 bp

E Value
0E0

BLAST Score
4,050.8 bits

Similarity

98.23%

Coverage

99.78%

Alignment (schematic)

SEQ ID NO 1

99.78% cov
XM_003279208

53.84% cov

Alignment Length
2,318 bp
Macaca mulatta
Macaca mulatta
Public DB hit
GI:297274729
XM_001091132
1 of 3 hits reported for Macaca mulatta.

Hit length
2,665 bp

E Value
0E0

BLAST Score
3,941.9 bits

Similarity

97.37%

Coverage

99.78%

Alignment (schematic)

SEQ ID NO 1

99.78% cov
XM_001091132

86.94% cov

Alignment Length
2,322 bp
Pongo abelii
Pongo abelii
Public DB hit
GI:297694317
XR_094872

Hit length
2,948 bp

E Value
0E0

BLAST Score
3,125.7 bits

Similarity

98.01%

Coverage

77.69%

Alignment (schematic)

SEQ ID NO 1

77.69% cov
XR_094872

60.96% cov

Alignment Length
1,807 bp
Macaca fascicularis
Macaca fascicularis
Public DB hit
GI:67970224
AB169372

Hit length
1,940 bp

E Value
0E0

BLAST Score
3,022.2 bits

Similarity

97%

Coverage

77.56%

Alignment (schematic)

SEQ ID NO 1

77.56% cov
AB169372

92.58% cov

Alignment Length
1,801 bp

Occurrence

4 times in PatSeqDB

in 4 documents

Tools

SEQ ID NO

Length

1,296

Sequence Type

DNA

Locations

Claims, Detailed Description, Drawings, Summary

Declared organism

Homo sapiens

Determined organism

Occurrence

4 times in PatSeqDB

in 4 documents

Tools

SEQ ID NO

Length

431

Sequence Type

peptide

Locations

Detailed Description, Drawings, Summary

Declared organism

Homo sapiens

Determined organism

Homo sapiens
Homo sapiens
Public DB hit
GI:110349738
NP_001027467
1 of 6 hits reported for Homo sapiens.

Hit length
431 aa

E Value
0E0

BLAST Score
887.1 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 3

100% cov
NP_001027467

100% cov

Alignment Length
431 aa

CIGAR string
431M mismatches: 0 - insertions: 0 - deletions: 0
Macaca mulatta
Macaca mulatta
Public DB hit
GI:109121156
XP_001091132
1 of 2 hits reported for Macaca mulatta.

Hit length
431 aa

E Value
0E0

BLAST Score
885.6 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 3

100% cov
XP_001091132

100% cov

Alignment Length
431 aa
synthetic construct
synthetic construct
Public DB hit
GI:33304141
AAQ02578
1 of 2 hits reported for synthetic construct.

Hit length
432 aa

E Value
0E0

BLAST Score
884.8 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 3

100% cov
AAQ02578

99.77% cov

Alignment Length
431 aa
Nomascus leucogenys
Nomascus leucogenys
Public DB hit
GI:332260360
XP_003279256

Hit length
431 aa

E Value
0E0

BLAST Score
884 bits

Similarity

99.77%

Coverage

100%

Alignment (schematic)

SEQ ID NO 3

100% cov
XP_003279256

100% cov

Alignment Length
431 aa
Pan troglodytes
Pan troglodytes
Public DB hit
GI:114650410
XP_001144072

Hit length
443 aa

E Value
0E0

BLAST Score
858.2 bits

Similarity

97.93%

Coverage

100%

Alignment (schematic)

SEQ ID NO 3

100% cov
XP_001144072

97.97% cov

Alignment Length
434 aa
Bos taurus
Bos taurus
Public DB hit
GI:255003690
NP_001093420

Hit length
433 aa

E Value
0E0

BLAST Score
824.3 bits

Similarity

98.15%

Coverage

100%

Alignment (schematic)

SEQ ID NO 3

100% cov
NP_001093420

100% cov

Alignment Length
433 aa
Mus musculus
Mus musculus
Public DB hit
GI:21703922
NP_663440
1 of 2 hits reported for Mus musculus.

Hit length
431 aa

E Value
0E0

BLAST Score
820.5 bits

Similarity

98.84%

Coverage

100%

Alignment (schematic)

SEQ ID NO 3

100% cov
NP_663440

100% cov

Alignment Length
431 aa
Rattus norvegicus
Rattus norvegicus
Public DB hit
GI:188595689
NP_001120966

Hit length
431 aa

E Value
0E0

BLAST Score
815.5 bits

Similarity

98.38%

Coverage

100%

Alignment (schematic)

SEQ ID NO 3

100% cov
NP_001120966

100% cov

Alignment Length
431 aa

Occurrence

59 times in PatSeqDB

in 10 extended families
(6 referenced in claims)
in 13 simple families
(7 referenced in claims)
in 52 documents

Tools

SEQ ID NO

Length

426

Sequence Type

peptide

Locations

Detailed Description, Drawings

Declared organism

Homo sapiens

Determined organism

Homo sapiens
Homo sapiens
Public DB hit
GI:1430822
CAA67700
1 of 3 hits reported for Homo sapiens.

Hit length
426 aa

E Value
0E0

BLAST Score
879.8 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 4

100% cov
CAA67700

100% cov

Alignment Length
426 aa

CIGAR string
426M mismatches: 0 - insertions: 0 - deletions: 0
Pongo abelii
Pongo abelii
Public DB hit
GI:297669933
XP_002813133

Hit length
426 aa

E Value
0E0

BLAST Score
872.8 bits

Similarity

99.53%

Coverage

100%

Alignment (schematic)

SEQ ID NO 4

100% cov
XP_002813133

100% cov

Alignment Length
426 aa
Pan troglodytes
Pan troglodytes
Public DB hit
GI:332815896
XP_001162228

Hit length
426 aa

E Value
0E0

BLAST Score
872.1 bits

Similarity

99.53%

Coverage

100%

Alignment (schematic)

SEQ ID NO 4

100% cov
XP_001162228

100% cov

Alignment Length
426 aa
Rattus norvegicus
Rattus norvegicus
Public DB hit
GI:34576555
NP_908938

Hit length
426 aa

E Value
0E0

BLAST Score
865.9 bits

Similarity

99.53%

Coverage

100%

Alignment (schematic)

SEQ ID NO 4

100% cov
NP_908938

100% cov

Alignment Length
426 aa
Mus musculus
Mus musculus
Public DB hit
GI:12230009
Q9Z2W1
1 of 3 hits reported for Mus musculus.

Hit length
426 aa

E Value
0E0

BLAST Score
865.1 bits

Similarity

99.53%

Coverage

100%

Alignment (schematic)

SEQ ID NO 4

100% cov
Q9Z2W1

100% cov

Alignment Length
426 aa
Equus caballus
Equus caballus
Public DB hit
GI:194211523
XP_001497755

Hit length
426 aa

E Value
0E0

BLAST Score
837.4 bits

Similarity

98.36%

Coverage

100%

Alignment (schematic)

SEQ ID NO 4

100% cov
XP_001497755

100% cov

Alignment Length
426 aa
Macaca mulatta
Macaca mulatta
Public DB hit
GI:109101721
XP_001092650

Hit length
426 aa

E Value
0E0

BLAST Score
830.1 bits

Similarity

97.65%

Coverage

100%

Alignment (schematic)

SEQ ID NO 4

100% cov
XP_001092650

100% cov

Alignment Length
426 aa
Bos taurus
Bos taurus
Public DB hit
GI:122140083
Q3SWY6

Hit length
426 aa

E Value
0E0

BLAST Score
827 bits

Similarity

97.65%

Coverage

100%

Alignment (schematic)

SEQ ID NO 4

100% cov
Q3SWY6

100% cov

Alignment Length
426 aa
Ailuropoda melanoleuca
Ailuropoda melanoleuca
Public DB hit
GI:301775541
XP_002923182
1 of 2 hits reported for Ailuropoda melanoleuca.

Hit length
427 aa

E Value
0E0

BLAST Score
824.7 bits

Similarity

97.42%

Coverage

100%

Alignment (schematic)

SEQ ID NO 4

100% cov
XP_002923182

100% cov

Alignment Length
427 aa
Sus scrofa
Sus scrofa
Public DB hit
GI:311273415
XP_003133853

Hit length
433 aa

E Value
0E0

BLAST Score
818.9 bits

Similarity

96.95%

Coverage

100%

Alignment (schematic)

SEQ ID NO 4

100% cov
XP_003133853

98.38% cov

Alignment Length
426 aa
Nomascus leucogenys
Nomascus leucogenys
Public DB hit
GI:332259752
XP_003278948

Hit length
434 aa

E Value
0E0

BLAST Score
793.1 bits

Similarity

94.01%

Coverage

100%

Alignment (schematic)

SEQ ID NO 4

100% cov
XP_003278948

100% cov

Alignment Length
434 aa

Occurrence

27 times in PatSeqDB

in 7 families
(1 referenced in claims)
in 26 documents

Tools

SEQ ID NO

Length

2,322

Sequence Type

DNA

Locations

Detailed Description, Drawings, Summary

Declared organism

Artificial

Determined organism

Homo sapiens
Homo sapiens
Public DB hit
GI:23274190
BC035578
1 of 8 hits reported for Homo sapiens.

Hit length
2,640 bp

E Value
0E0

BLAST Score
4,283.5 bits

Similarity

99.96%

Coverage

100%

Alignment (schematic)

SEQ ID NO 5

100% cov
BC035578

87.95% cov

Alignment Length
2,322 bp

CIGAR string
281MN2040M mismatches: 1 - insertions: 0 - deletions: 0
Pan troglodytes
Pan troglodytes
Public DB hit
GI:114650409
XM_001144072

Hit length
4,566 bp

E Value
0E0

BLAST Score
4,095.1 bits

Similarity

99.21%

Coverage

97.85%

Alignment (schematic)

SEQ ID NO 5

97.85% cov
XM_001144072

49.74% cov

Alignment Length
2,273 bp
Nomascus leucogenys
Nomascus leucogenys
Public DB hit
GI:332260359
XM_003279208
1 of 2 hits reported for Nomascus leucogenys.

Hit length
4,300 bp

E Value
0E0

BLAST Score
4,050.8 bits

Similarity

98.23%

Coverage

99.78%

Alignment (schematic)

SEQ ID NO 5

99.78% cov
XM_003279208

53.84% cov

Alignment Length
2,318 bp
Macaca mulatta
Macaca mulatta
Public DB hit
GI:297274729
XM_001091132
1 of 3 hits reported for Macaca mulatta.

Hit length
2,665 bp

E Value
0E0

BLAST Score
3,941.9 bits

Similarity

97.37%

Coverage

99.78%

Alignment (schematic)

SEQ ID NO 5

99.78% cov
XM_001091132

86.94% cov

Alignment Length
2,322 bp
Pongo abelii
Pongo abelii
Public DB hit
GI:297694317
XR_094872

Hit length
2,948 bp

E Value
0E0

BLAST Score
3,125.7 bits

Similarity

98.01%

Coverage

77.69%

Alignment (schematic)

SEQ ID NO 5

77.69% cov
XR_094872

60.96% cov

Alignment Length
1,807 bp
Macaca fascicularis
Macaca fascicularis
Public DB hit
GI:67970224
AB169372

Hit length
1,940 bp

E Value
0E0

BLAST Score
3,022.2 bits

Similarity

97%

Coverage

77.56%

Alignment (schematic)

SEQ ID NO 5

77.56% cov
AB169372

92.58% cov

Alignment Length
1,801 bp

Occurrence

4 times in PatSeqDB

in 4 documents

Tools

SEQ ID NO

Length

Sequence Type

DNA

Locations

Detailed Description, Drawings

Declared organism

Artificial

Determined organism

Homo sapiens
Homo sapiens
Public DB hit
GI:296040448
NG_021219
1 of 6 hits reported for Homo sapiens.

Hit length
122,926 bp

E Value
9.39E-7

BLAST Score
60 bits

Similarity

91.3%

Coverage

100%

Alignment (schematic)

SEQ ID NO 6

100% cov
NG_021219

0.04% cov

Alignment Length
46 bp

CIGAR string
22M3N3MN17M mismatches: 4 - insertions: 0 - deletions: 0
Ailuropoda melanoleuca
Ailuropoda melanoleuca
Public DB hit
GI:301758119
XM_002914861
1 of 2 hits reported for Ailuropoda melanoleuca.

Hit length
2,359 bp

E Value
9.39E-7

BLAST Score
60 bits

Similarity

91.3%

Coverage

100%

Alignment (schematic)

SEQ ID NO 6

100% cov
XM_002914861

1.95% cov

Alignment Length
46 bp

CIGAR string
22M3N3MN17M mismatches: 4 - insertions: 0 - deletions: 0
Equus caballus
Equus caballus
Public DB hit
GI:194222004
XM_001916536
1 of 2 hits reported for Equus caballus.

Hit length
1,287 bp

E Value
9.39E-7

BLAST Score
60 bits

Similarity

91.3%

Coverage

100%

Alignment (schematic)

SEQ ID NO 6

100% cov
XM_001916536

3.57% cov

Alignment Length
46 bp

CIGAR string
22M3N3MN17M mismatches: 4 - insertions: 0 - deletions: 0
Rattus norvegicus
Rattus norvegicus
Public DB hit
GI:188595688
NM_001127494
1 of 2 hits reported for Rattus norvegicus.

Hit length
1,350 bp

E Value
9.39E-7

BLAST Score
60 bits

Similarity

91.3%

Coverage

100%

Alignment (schematic)

SEQ ID NO 6

100% cov
NM_001127494

3.41% cov

Alignment Length
46 bp
Nomascus leucogenys
Nomascus leucogenys
Public DB hit
GI:332260361
XM_003279209
1 of 4 hits reported for Nomascus leucogenys.

Hit length
4,582 bp

E Value
2.29E-4

BLAST Score
52 bits

Similarity

89.13%

Coverage

100%

Alignment (schematic)

SEQ ID NO 6

100% cov
XM_003279209

1% cov

Alignment Length
46 bp
Pongo abelii
Pongo abelii
Public DB hit
GI:297694317
XR_094872
1 of 2 hits reported for Pongo abelii.

Hit length
2,948 bp

E Value
2.29E-4

BLAST Score
52 bits

Similarity

89.13%

Coverage

100%

Alignment (schematic)

SEQ ID NO 6

100% cov
XR_094872

1.56% cov

Alignment Length
46 bp
Macaca mulatta
Macaca mulatta
Public DB hit
GI:297274730
XM_001091015
1 of 3 hits reported for Macaca mulatta.

Hit length
2,683 bp

E Value
2.29E-4

BLAST Score
52 bits

Similarity

89.13%

Coverage

100%

Alignment (schematic)

SEQ ID NO 6

100% cov
XM_001091015

1.71% cov

Alignment Length
46 bp
Callithrix jacchus
Callithrix jacchus
Public DB hit
GI:296188878
XR_086678

Hit length
1,344 bp

E Value
2.29E-4

BLAST Score
52 bits

Similarity

89.13%

Coverage

100%

Alignment (schematic)

SEQ ID NO 6

100% cov
XR_086678

3.42% cov

Alignment Length
46 bp
Oryctolagus cuniculus
Oryctolagus cuniculus
Public DB hit
GI:291393171
XM_002712942

Hit length
1,992 bp

E Value
2.29E-4

BLAST Score
52 bits

Similarity

89.13%

Coverage

100%

Alignment (schematic)

SEQ ID NO 6

100% cov
XM_002712942

2.31% cov

Alignment Length
46 bp
Mus musculus
Mus musculus
Public DB hit
GI:110349735
NM_145465

Hit length
2,575 bp

E Value
2.29E-4

BLAST Score
52 bits

Similarity

89.13%

Coverage

100%

Alignment (schematic)

SEQ ID NO 6

100% cov
NM_145465

1.79% cov

Alignment Length
46 bp
synthetic construct
synthetic construct
Public DB hit
GI:307685124
AB590338

Hit length
1,310 bp

E Value
2.29E-4

BLAST Score
52 bits

Similarity

89.13%

Coverage

100%

Alignment (schematic)

SEQ ID NO 6

100% cov
AB590338

3.51% cov

Alignment Length
46 bp

Occurrence

4 times in PatSeqDB

in 4 documents

Tools

SEQ ID NO

Length

Sequence Type

DNA

Locations

Detailed Description, Drawings

Declared organism

Artificial

Determined organism

Homo sapiens
Homo sapiens
Public DB hit
GI:296040448
NG_021219
1 of 6 hits reported for Homo sapiens.

Hit length
122,926 bp

E Value
9.39E-7

BLAST Score
60 bits

Similarity

91.3%

Coverage

100%

Alignment (schematic)

SEQ ID NO 7

100% cov
NG_021219

0.04% cov

Alignment Length
46 bp

CIGAR string
17MN3M3N22M mismatches: 4 - insertions: 0 - deletions: 0
Ailuropoda melanoleuca
Ailuropoda melanoleuca
Public DB hit
GI:301758119
XM_002914861
1 of 2 hits reported for Ailuropoda melanoleuca.

Hit length
2,359 bp

E Value
9.39E-7

BLAST Score
60 bits

Similarity

91.3%

Coverage

100%

Alignment (schematic)

SEQ ID NO 7

100% cov
XM_002914861

1.95% cov

Alignment Length
46 bp

CIGAR string
17MN3M3N22M mismatches: 4 - insertions: 0 - deletions: 0
Equus caballus
Equus caballus
Public DB hit
GI:194222004
XM_001916536
1 of 2 hits reported for Equus caballus.

Hit length
1,287 bp

E Value
9.39E-7

BLAST Score
60 bits

Similarity

91.3%

Coverage

100%

Alignment (schematic)

SEQ ID NO 7

100% cov
XM_001916536

3.57% cov

Alignment Length
46 bp

CIGAR string
17MN3M3N22M mismatches: 4 - insertions: 0 - deletions: 0
Rattus norvegicus
Rattus norvegicus
Public DB hit
GI:188595688
NM_001127494
1 of 2 hits reported for Rattus norvegicus.

Hit length
1,350 bp

E Value
9.39E-7

BLAST Score
60 bits

Similarity

91.3%

Coverage

100%

Alignment (schematic)

SEQ ID NO 7

100% cov
NM_001127494

3.41% cov

Alignment Length
46 bp
Nomascus leucogenys
Nomascus leucogenys
Public DB hit
GI:332260361
XM_003279209
1 of 4 hits reported for Nomascus leucogenys.

Hit length
4,582 bp

E Value
2.29E-4

BLAST Score
52 bits

Similarity

89.13%

Coverage

100%

Alignment (schematic)

SEQ ID NO 7

100% cov
XM_003279209

1% cov

Alignment Length
46 bp
Pongo abelii
Pongo abelii
Public DB hit
GI:297694317
XR_094872
1 of 2 hits reported for Pongo abelii.

Hit length
2,948 bp

E Value
2.29E-4

BLAST Score
52 bits

Similarity

89.13%

Coverage

100%

Alignment (schematic)

SEQ ID NO 7

100% cov
XR_094872

1.56% cov

Alignment Length
46 bp
Macaca mulatta
Macaca mulatta
Public DB hit
GI:297274730
XM_001091015
1 of 3 hits reported for Macaca mulatta.

Hit length
2,683 bp

E Value
2.29E-4

BLAST Score
52 bits

Similarity

89.13%

Coverage

100%

Alignment (schematic)

SEQ ID NO 7

100% cov
XM_001091015

1.71% cov

Alignment Length
46 bp
Callithrix jacchus
Callithrix jacchus
Public DB hit
GI:296188878
XR_086678

Hit length
1,344 bp

E Value
2.29E-4

BLAST Score
52 bits

Similarity

89.13%

Coverage

100%

Alignment (schematic)

SEQ ID NO 7

100% cov
XR_086678

3.42% cov

Alignment Length
46 bp
Oryctolagus cuniculus
Oryctolagus cuniculus
Public DB hit
GI:291393171
XM_002712942

Hit length
1,992 bp

E Value
2.29E-4

BLAST Score
52 bits

Similarity

89.13%

Coverage

100%

Alignment (schematic)

SEQ ID NO 7

100% cov
XM_002712942

2.31% cov

Alignment Length
46 bp
Mus musculus
Mus musculus
Public DB hit
GI:110349735
NM_145465

Hit length
2,575 bp

E Value
2.29E-4

BLAST Score
52 bits

Similarity

89.13%

Coverage

100%

Alignment (schematic)

SEQ ID NO 7

100% cov
NM_145465

1.79% cov

Alignment Length
46 bp
synthetic construct
synthetic construct
Public DB hit
GI:307685124
AB590338

Hit length
1,310 bp

E Value
2.29E-4

BLAST Score
52 bits

Similarity

89.13%

Coverage

100%

Alignment (schematic)

SEQ ID NO 7

100% cov
AB590338

3.51% cov

Alignment Length
46 bp

Occurrence

4 times in PatSeqDB

in 4 documents

Tools

SEQ ID NO

Length

Sequence Type

DNA

Locations

Detailed Description, Drawings

Declared organism

Artificial

Determined organism

Occurrence

4 times in PatSeqDB

in 4 documents

Tools

SEQ ID NO

Length

Sequence Type

DNA

Locations

Detailed Description, Drawings

Declared organism

Artificial

Determined organism

Occurrence

4 times in PatSeqDB

in 4 documents

Tools

9 sequences found in this patent (in total)

Filter sequences

Displaying 9 sequences

Homo sapiens

Public DB hit

Hit length

E Value

BLAST Score

Similarity

Coverage

Alignment (schematic)

Alignment Length

CIGAR string

Pan troglodytes

Public DB hit

Hit length

E Value

BLAST Score

Similarity

Coverage

Alignment (schematic)

Alignment Length

Nomascus leucogenys

Public DB hit

Hit length

E Value

BLAST Score

Similarity

Coverage

Alignment (schematic)

Alignment Length

Macaca mulatta

Public DB hit

Hit length

E Value

BLAST Score

Similarity

Coverage

Alignment (schematic)

Alignment Length

Pongo abelii

Public DB hit

Hit length

E Value

BLAST Score

Similarity

Coverage

Alignment (schematic)

Alignment Length

Macaca fascicularis

Public DB hit

Hit length

E Value

BLAST Score

Similarity

Coverage

Alignment (schematic)

Alignment Length

Homo sapiens

Public DB hit

Hit length

E Value

BLAST Score

Similarity

Coverage

Alignment (schematic)

Alignment Length

CIGAR string

synthetic construct

Public DB hit

Hit length

E Value

BLAST Score

Similarity

Coverage

Alignment (schematic)

Alignment Length

CIGAR string

Pan troglodytes

Public DB hit