Human Skin Equivalents Expressing Exogenous Polypeptides

Data obtained from: EMBL-EBI Pat DDBJ Pat USPTO Fulltext NCBI GenBank
124 sequences found in this patent (in total)

Filter sequences

Clear
Download sequences in fasta format: 105 peptides 19 DNAs

Displaying 1 - 10 of 124 sequences

SEQ ID NO
Length
Sequence Type
Locations
Declared organism
Determined organism
Occurrence
Tools
SEQ ID NO
1
Length
27
Sequence Type
DNA
Locations
Detailed Description
Declared organism
Artificial
Determined organism
  • Cloning vector 3'HPRT

    Cloning vector 3'HPRT

    • Public DB hit
      GI:43823410
      CR293541
    • Hit length
      10,654 bp
    • E Value
      1.78E-5
    • BLAST Score
      54 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      CR293541
      0.25% cov
    • Alignment Length
      27 bp
    • CIGAR string
      27M mismatches: 0 - insertions: 0 - deletions: 0
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:27545118
      AC105208
      1 of 7 hits reported for Homo sapiens.
    • Hit length
      65,233 bp
    • E Value
      1.78E-5
    • BLAST Score
      54 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      AC105208
      0.04% cov
    • Alignment Length
      27 bp
    • CIGAR string
      27M mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
21 times in PatSeqDB
Tools
SEQ ID NO
2
Length
24
Sequence Type
DNA
Locations
Detailed Description
Declared organism
Artificial
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:206725518
      NG_008624
      1 of 22 hits reported for Homo sapiens.
    • Hit length
      11,617 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NG_008624
      0.21% cov
    • Alignment Length
      24 bp
    • CIGAR string
      24M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332847587
      XM_003315438
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      1,665 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XM_003315438
      1.44% cov
    • Alignment Length
      24 bp
    • CIGAR string
      24M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332260823
      XM_003279433
    • Hit length
      1,784 bp
    • E Value
      1.68E-1
    • BLAST Score
      40.1 bits
    • Similarity
      95.83%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XM_003279433
      1.35% cov
    • Alignment Length
      24 bp
Occurrence
21 times in PatSeqDB
Tools
SEQ ID NO
3
Length
1,767
Sequence Type
DNA
Locations
Detailed Description
Declared organism
Artificial
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:212276358
      AC216692
      1 of 17 hits reported for Homo sapiens.
    • Hit length
      33,357 bp
    • E Value
      0E0
    • BLAST Score
      3,055.5 bits
    • Similarity
      99.23%
    • Coverage
      95.76%
    • Alignment (schematic)

      SEQ ID NO 3
      95.76% cov
      AC216692
      5.08% cov
    • Alignment Length
      1,696 bp
    • CIGAR string
      75H729MNMN29MN68MN85MN126MI104MI61MI263MN39MN56MN3MD2MI117M mismatches: 8 - insertions: 4 - deletions: 1
  • Cloning vector 3'HPRT

    Cloning vector 3'HPRT

    • Public DB hit
      GI:43823410
      CR293541
    • Hit length
      10,654 bp
    • E Value
      0E0
    • BLAST Score
      3,013 bits
    • Similarity
      98.71%
    • Coverage
      95.98%
    • Alignment (schematic)

      SEQ ID NO 3
      95.98% cov
      CR293541
      15.95% cov
    • Alignment Length
      1,700 bp
  • Expression vector pcDNA3-hFIX

    Expression vector pcDNA3-hFIX

    • Public DB hit
      GI:114386387
      DQ886588
    • Hit length
      8,223 bp
    • E Value
      0E0
    • BLAST Score
      2,939.1 bits
    • Similarity
      98.22%
    • Coverage
      95.19%
    • Alignment (schematic)

      SEQ ID NO 3
      95.19% cov
      DQ886588
      20.41% cov
    • Alignment Length
      1,686 bp
  • Keratinocyte expression vector phPK14H

    Keratinocyte expression vector phPK14H

    • Public DB hit
      GI:114329294
      DQ898181
    • Hit length
      6,815 bp
    • E Value
      0E0
    • BLAST Score
      2,939.1 bits
    • Similarity
      98.22%
    • Coverage
      95.19%
    • Alignment (schematic)

      SEQ ID NO 3
      95.19% cov
      DQ898181
      24.62% cov
    • Alignment Length
      1,686 bp
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:109809847
      AC185986
    • Hit length
      165,215 bp
    • E Value
      0E0
    • BLAST Score
      2,494.1 bits
    • Similarity
      93.26%
    • Coverage
      95.76%
    • Alignment (schematic)

      SEQ ID NO 3
      95.76% cov
      AC185986
      1.03% cov
    • Alignment Length
      1,707 bp
Occurrence
21 times in PatSeqDB
Tools
SEQ ID NO
4
Length
30
Sequence Type
DNA
Locations
Detailed Description
Declared organism
Artificial
Determined organism
Occurrence
21 times in PatSeqDB
Tools
SEQ ID NO
5
Length
30
Sequence Type
DNA
Locations
Detailed Description
Declared organism
Artificial
Determined organism
Occurrence
21 times in PatSeqDB
Tools
SEQ ID NO
6
Length
21
Sequence Type
DNA
Locations
Detailed Description
Declared organism
Artificial
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:224809241
      NG_011446
      1 of 10 hits reported for Homo sapiens.
    • Hit length
      90,688 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NG_011446
      0.02% cov
    • Alignment Length
      21 bp
    • CIGAR string
      21M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332821476
      XM_526931
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      2,461 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_526931
      0.85% cov
    • Alignment Length
      21 bp
    • CIGAR string
      21M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332257427
      XM_003277758
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      2,471 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_003277758
      0.85% cov
    • Alignment Length
      21 bp
    • CIGAR string
      21M mismatches: 0 - insertions: 0 - deletions: 0
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:329744554
      NM_001206326
      1 of 2 hits reported for Bos taurus.
    • Hit length
      3,384 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NM_001206326
      0.62% cov
    • Alignment Length
      21 bp
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:311273663
      XM_003133924
      1 of 2 hits reported for Sus scrofa.
    • Hit length
      1,426 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_003133924
      1.47% cov
    • Alignment Length
      21 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297675220
      XM_002815541
      1 of 2 hits reported for Pongo abelii.
    • Hit length
      3,665 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_002815541
      0.57% cov
    • Alignment Length
      21 bp
  • Oryctolagus cuniculus

    Oryctolagus cuniculus

    • Public DB hit
      GI:291395320
      XM_002714023
      1 of 2 hits reported for Oryctolagus cuniculus.
    • Hit length
      663 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_002714023
      3.17% cov
    • Alignment Length
      21 bp
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:149732756
      XM_001498109
      1 of 2 hits reported for Equus caballus.
    • Hit length
      651 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_001498109
      3.23% cov
    • Alignment Length
      21 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:313882557
      HQ258011
    • Hit length
      658 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      HQ258011
      3.19% cov
    • Alignment Length
      21 bp
Occurrence
21 times in PatSeqDB
Tools
SEQ ID NO
7
Length
20
Sequence Type
DNA
Locations
Detailed Description
Declared organism
Artificial
Determined organism
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:255683514
      NM_001164018
      1 of 2 hits reported for Equus caballus.
    • Hit length
      444 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NM_001164018
      4.5% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • PiggyBac insertional mutagenesis vector Slingshot-PB

    PiggyBac insertional mutagenesis vector Slingshot-PB

    • Public DB hit
      GI:294985311
      GU937109
    • Hit length
      15,199 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      GU937109
      0.13% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Cloning vector pMAZe

    Cloning vector pMAZe

    • Public DB hit
      GI:288188775
      GQ856364
    • Hit length
      11,860 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      GQ856364
      0.17% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:197205403
      EU919427
    • Hit length
      4,794 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      EU919427
      0.42% cov
    • Alignment Length
      20 bp
  • Mammalian expression vector pNBioSec

    Mammalian expression vector pNBioSec

    • Public DB hit
      GI:158534336
      EU082004
    • Hit length
      7,032 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      EU082004
      0.28% cov
    • Alignment Length
      20 bp
  • Expression vector pP0-Cre

    Expression vector pP0-Cre

    • Public DB hit
      GI:158302652
      AB363405
    • Hit length
      6,350 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      AB363405
      0.31% cov
    • Alignment Length
      20 bp
  • Cloning vector pU.CAG.Hand1

    Cloning vector pU.CAG.Hand1

    • Public DB hit
      GI:124361332
      EF208956
    • Hit length
      5,947 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      EF208956
      0.34% cov
    • Alignment Length
      20 bp
  • Cloning vector pU.CAG.MyocS

    Cloning vector pU.CAG.MyocS

    • Public DB hit
      GI:124361330
      EF208955
    • Hit length
      7,910 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      EF208955
      0.25% cov
    • Alignment Length
      20 bp
  • Shuttle vector pUCAG.TBX5

    Shuttle vector pUCAG.TBX5

    • Public DB hit
      GI:122893047
      EF186088
    • Hit length
      6,630 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      EF186088
      0.3% cov
    • Alignment Length
      20 bp
  • Shuttle vector pUCAG.MEF2C

    Shuttle vector pUCAG.MEF2C

    • Public DB hit
      GI:122893045
      EF186087
    • Hit length
      6,382 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      EF186087
      0.31% cov
    • Alignment Length
      20 bp
  • Shuttle vector pUCAG.GATA4

    Shuttle vector pUCAG.GATA4

    • Public DB hit
      GI:122893043
      EF186086
    • Hit length
      6,388 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      EF186086
      0.31% cov
    • Alignment Length
      20 bp
  • Shuttle vector pUCAG.nkx2.5

    Shuttle vector pUCAG.nkx2.5

    • Public DB hit
      GI:122893041
      EF186085
    • Hit length
      6,175 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      EF186085
      0.32% cov
    • Alignment Length
      20 bp
  • Shuttle vector pUCAG.myocardin

    Shuttle vector pUCAG.myocardin

    • Public DB hit
      GI:122893039
      EF186084
    • Hit length
      8,054 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      EF186084
      0.25% cov
    • Alignment Length
      20 bp
  • Shuttle vector pUCAG.Gfp

    Shuttle vector pUCAG.Gfp

    • Public DB hit
      GI:122893037
      EF186083
    • Hit length
      5,761 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      EF186083
      0.35% cov
    • Alignment Length
      20 bp
  • Expression vector pCXGFP-1

    Expression vector pCXGFP-1

    • Public DB hit
      GI:117939115
      AB281497
    • Hit length
      6,787 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      AB281497
      0.29% cov
    • Alignment Length
      20 bp
  • Ochotona curzoniae

    Ochotona curzoniae

    • Public DB hit
      GI:110734519
      DQ839484
    • Hit length
      444 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      DQ839484
      4.5% cov
    • Alignment Length
      20 bp
  • Transposon vector T2AR200R200G

    Transposon vector T2AR200R200G

    • Public DB hit
      GI:110082649
      AB262456
    • Hit length
      2,602 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      AB262456
      0.77% cov
    • Alignment Length
      20 bp
  • Transposon vector T2AL200L200G

    Transposon vector T2AL200L200G

    • Public DB hit
      GI:110082647
      AB262455
    • Hit length
      2,602 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      AB262455
      0.77% cov
    • Alignment Length
      20 bp
  • Transposon vector T2AL50R50G

    Transposon vector T2AL50R50G

    • Public DB hit
      GI:110082645
      AB262454
    • Hit length
      2,302 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      AB262454
      0.87% cov
    • Alignment Length
      20 bp
  • Transposon vector T2AL200R100G

    Transposon vector T2AL200R100G

    • Public DB hit
      GI:110082643
      AB262453
    • Hit length
      2,502 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      AB262453
      0.8% cov
    • Alignment Length
      20 bp
  • Transposon vector T2AL200R150G

    Transposon vector T2AL200R150G

    • Public DB hit
      GI:110082641
      AB262452
    • Hit length
      2,552 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      AB262452
      0.78% cov
    • Alignment Length
      20 bp
  • Transposon vector T2AL200R175G

    Transposon vector T2AL200R175G

    • Public DB hit
      GI:110082639
      AB262451
    • Hit length
      2,577 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      AB262451
      0.78% cov
    • Alignment Length
      20 bp
  • Transposon vector T2AL150R200G

    Transposon vector T2AL150R200G

    • Public DB hit
      GI:110082637
      AB262450
    • Hit length
      2,552 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      AB262450
      0.78% cov
    • Alignment Length
      20 bp
  • Transposon vector T2AL175R200G

    Transposon vector T2AL175R200G

    • Public DB hit
      GI:110082635
      AB262449
    • Hit length
      2,577 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      AB262449
      0.78% cov
    • Alignment Length
      20 bp
Occurrence
21 times in PatSeqDB
Tools
SEQ ID NO
8
Length
50
Sequence Type
DNA
Locations
Detailed Description
Declared organism
Artificial
Determined organism
  • Schistosoma mansoni

    Schistosoma mansoni

    • Public DB hit
      GI:238667843
      FN363668
    • Hit length
      1,631 bp
    • E Value
      2.65E-7
    • BLAST Score
      61.9 bits
    • Similarity
      100%
    • Coverage
      62%
    • Alignment (schematic)

      SEQ ID NO 8
      62% cov
      FN363668
      1.9% cov
    • Alignment Length
      31 bp
    • CIGAR string
      19H31M mismatches: 0 - insertions: 0 - deletions: 0
  • Danio rerio

    Danio rerio

    • Public DB hit
      GI:152012990
      BC150167
      1 of 3 hits reported for Danio rerio.
    • Hit length
      4,415 bp
    • E Value
      2.65E-7
    • BLAST Score
      61.9 bits
    • Similarity
      100%
    • Coverage
      62%
    • Alignment (schematic)

      SEQ ID NO 8
      62% cov
      BC150167
      0.7% cov
    • Alignment Length
      31 bp
    • CIGAR string
      19H31M mismatches: 0 - insertions: 0 - deletions: 0
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:20988791
      BC030176
      1 of 6 hits reported for Mus musculus.
    • Hit length
      847 bp
    • E Value
      2.65E-7
    • BLAST Score
      61.9 bits
    • Similarity
      100%
    • Coverage
      62%
    • Alignment (schematic)

      SEQ ID NO 8
      62% cov
      BC030176
      3.66% cov
    • Alignment Length
      31 bp
  • Xenopus laevis

    Xenopus laevis

    • Public DB hit
      GI:92447194
      BC072757
      1 of 4 hits reported for Xenopus laevis.
    • Hit length
      4,994 bp
    • E Value
      2.65E-7
    • BLAST Score
      61.9 bits
    • Similarity
      100%
    • Coverage
      62%
    • Alignment (schematic)

      SEQ ID NO 8
      62% cov
      BC072757
      0.62% cov
    • Alignment Length
      31 bp
  • Aspergillus oryzae

    Aspergillus oryzae

    • Public DB hit
      GI:84577790
      AB229964
      1 of 7 hits reported for Aspergillus oryzae.
    • Hit length
      585 bp
    • E Value
      2.65E-7
    • BLAST Score
      61.9 bits
    • Similarity
      100%
    • Coverage
      62%
    • Alignment (schematic)

      SEQ ID NO 8
      62% cov
      AB229964
      5.3% cov
    • Alignment Length
      31 bp
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:18042967
      BC020376
      1 of 3 hits reported for Homo sapiens.
    • Hit length
      1,569 bp
    • E Value
      2.65E-7
    • BLAST Score
      61.9 bits
    • Similarity
      100%
    • Coverage
      62%
    • Alignment (schematic)

      SEQ ID NO 8
      62% cov
      BC020376
      1.98% cov
    • Alignment Length
      31 bp
  • Cucumis sativus

    Cucumis sativus

    • Public DB hit
      GI:2462264
      Y12793
    • Hit length
      1,297 bp
    • E Value
      2.65E-7
    • BLAST Score
      61.9 bits
    • Similarity
      100%
    • Coverage
      62%
    • Alignment (schematic)

      SEQ ID NO 8
      62% cov
      Y12793
      2.39% cov
    • Alignment Length
      31 bp
Occurrence
21 times in PatSeqDB
Tools
SEQ ID NO
9
Length
322
Sequence Type
DNA
Locations
Detailed Description, Drawings
Declared organism
Homo sapiens
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:1755147
      U73945
      1 of 5 hits reported for Homo sapiens.
    • Hit length
      322 bp
    • E Value
      5.41E-167
    • BLAST Score
      595.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      U73945
      100% cov
    • Alignment Length
      322 bp
    • CIGAR string
      322M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332244598
      XM_003271413
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      463 bp
    • E Value
      2.61E-140
    • BLAST Score
      507.1 bits
    • Similarity
      95.05%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XM_003271413
      69.55% cov
    • Alignment Length
      323 bp
    • CIGAR string
      28MN22MN83MN15MN17MN8MN8MN32MN4MN25MIMD3MN42MN2MN7MN4MN6M mismatches: 14 - insertions: 1 - deletions: 1
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297682218
      XM_002818778
      1 of 2 hits reported for Pongo abelii.
    • Hit length
      478 bp
    • E Value
      2.61E-140
    • BLAST Score
      507.1 bits
    • Similarity
      95.31%
    • Coverage
      99.07%
    • Alignment (schematic)

      SEQ ID NO 9
      99.07% cov
      XM_002818778
      66.74% cov
    • Alignment Length
      320 bp
    • CIGAR string
      28MN22MN34MN64MN17MN17MN23MN8MIMD12MN17MN37M2N10MN3MN12M3H mismatches: 13 - insertions: 1 - deletions: 1
  • Pongo pygmaeus

    Pongo pygmaeus

    • Public DB hit
      GI:134802575
      AM410099
    • Hit length
      228 bp
    • E Value
      9.71E-115
    • BLAST Score
      422.2 bits
    • Similarity
      100%
    • Coverage
      70.81%
    • Alignment (schematic)

      SEQ ID NO 9
      70.81% cov
      AM410099
      100% cov
    • Alignment Length
      228 bp
    • CIGAR string
      71H228M23H mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:134802566
      AM410097
      1 of 3 hits reported for Pan troglodytes.
    • Hit length
      228 bp
    • E Value
      2.1E-111
    • BLAST Score
      411.1 bits
    • Similarity
      99.12%
    • Coverage
      70.81%
    • Alignment (schematic)

      SEQ ID NO 9
      70.81% cov
      AM410097
      100% cov
    • Alignment Length
      228 bp
    • CIGAR string
      71H107MN72MN47M23H mismatches: 2 - insertions: 0 - deletions: 0
  • Gorilla gorilla

    Gorilla gorilla

    • Public DB hit
      GI:134802571
      AM410098
    • Hit length
      228 bp
    • E Value
      4.55E-108
    • BLAST Score
      400 bits
    • Similarity
      98.25%
    • Coverage
      70.81%
    • Alignment (schematic)

      SEQ ID NO 9
      70.81% cov
      AM410098
      100% cov
    • Alignment Length
      228 bp
    • CIGAR string
      71H53MN26MN59MN39MN47M23H mismatches: 4 - insertions: 0 - deletions: 0
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:312153013
      HQ448540
      1 of 2 hits reported for synthetic construct.
    • Hit length
      306 bp
    • E Value
      4.58E-103
    • BLAST Score
      383.4 bits
    • Similarity
      100%
    • Coverage
      64.29%
    • Alignment (schematic)

      SEQ ID NO 9
      64.29% cov
      HQ448540
      67.65% cov
    • Alignment Length
      207 bp
    • CIGAR string
      70H207M45H mismatches: 0 - insertions: 0 - deletions: 0
  • Hylobates lar

    Hylobates lar

    • Public DB hit
      GI:134802577
      AM410100
    • Hit length
      228 bp
    • E Value
      2.15E-96
    • BLAST Score
      361.2 bits
    • Similarity
      95.2%
    • Coverage
      70.81%
    • Alignment (schematic)

      SEQ ID NO 9
      70.81% cov
      AM410100
      100% cov
    • Alignment Length
      229 bp
    • CIGAR string
      71H64MN15MN17MN8MN8MN23MN8MN4MN25MIMD3MN42M23H mismatches: 9 - insertions: 1 - deletions: 1
Occurrence
36 times in PatSeqDB
Tools
SEQ ID NO
10
Length
319
Sequence Type
DNA
Locations
Detailed Description, Drawings
Declared organism
Homo sapiens
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:13124885
      NM_004942
      1 of 18 hits reported for Homo sapiens.
    • Hit length
      336 bp
    • E Value
      2.49E-165
    • BLAST Score
      590.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      NM_004942
      94.94% cov
    • Alignment Length
      319 bp
    • CIGAR string
      319M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332244524
      XM_003271375
    • Hit length
      408 bp
    • E Value
      1.19E-143
    • BLAST Score
      518.2 bits
    • Similarity
      95.94%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XM_003271375
      78.19% cov
    • Alignment Length
      320 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297682248
      XM_002818792
    • Hit length
      376 bp
    • E Value
      1.2E-138
    • BLAST Score
      501.6 bits
    • Similarity
      95%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XM_002818792
      84.84% cov
    • Alignment Length
      320 bp
Occurrence
29 times in PatSeqDB
Tools

Feedback