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Search for Biological Sequences disclosed in Patents

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Data obtained from: USPTO Fulltext
21 sequences found in this patent (in total)

Displaying 1 - 10 of 21 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
22
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:193788647
      NG_008172
      1 of 3 hits reported for Homo sapiens.
    • Hit length
      23,881 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      NG_008172
      0.09% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:335308454
      XM_003361188
      1 of 6 hits reported for Sus scrofa.
    • Hit length
      1,736 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XM_003361188
      1.27% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332814780
      XM_003309319
      1 of 10 hits reported for Pan troglodytes.
    • Hit length
      1,671 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XM_003309319
      1.32% cov
    • Alignment Length
      22 bp
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332209369
      XM_003253737
    • Hit length
      2,077 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XM_003253737
      1.06% cov
    • Alignment Length
      22 bp
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301769730
      XM_002920237
    • Hit length
      1,379 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XM_002920237
      1.6% cov
    • Alignment Length
      22 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297264356
      XM_001091711
    • Hit length
      1,981 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XM_001091711
      1.11% cov
    • Alignment Length
      22 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296204480
      XM_002749322
    • Hit length
      1,575 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XM_002749322
      1.4% cov
    • Alignment Length
      22 bp
  • Oryctolagus cuniculus

    Oryctolagus cuniculus

    • Public DB hit
      GI:295851121
      XM_002712195
    • Hit length
      1,227 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XM_002712195
      1.79% cov
    • Alignment Length
      22 bp
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:31341406
      NM_176664
    • Hit length
      3,618 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      NM_176664
      0.61% cov
    • Alignment Length
      22 bp
Occurrence
19 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
22
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:193788647
      NG_008172
      1 of 5 hits reported for Homo sapiens.
    • Hit length
      23,881 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NG_008172
      0.09% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332814780
      XM_003309319
      1 of 12 hits reported for Pan troglodytes.
    • Hit length
      1,671 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XM_003309319
      1.32% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332209369
      XM_003253737
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      2,077 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XM_003253737
      1.06% cov
    • Alignment Length
      22 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297668880
      XR_092994
      1 of 2 hits reported for Pongo abelii.
    • Hit length
      1,994 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XR_092994
      1.1% cov
    • Alignment Length
      22 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297264356
      XM_001091711
      1 of 2 hits reported for Macaca mulatta.
    • Hit length
      1,981 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XM_001091711
      1.11% cov
    • Alignment Length
      22 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296204480
      XM_002749322
      1 of 2 hits reported for Callithrix jacchus.
    • Hit length
      1,575 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XM_002749322
      1.4% cov
    • Alignment Length
      22 bp
Occurrence
19 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
3
Length
21
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:219521816
      NG_009216
      1 of 11 hits reported for Homo sapiens.
    • Hit length
      145,524 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NG_009216
      0.01% cov
    • Alignment Length
      21 bp
    • CIGAR string
      21M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332843382
      XM_001164055
      1 of 3 hits reported for Pan troglodytes.
    • Hit length
      4,820 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XM_001164055
      0.44% cov
    • Alignment Length
      21 bp
    • CIGAR string
      21M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332262631
      XM_003280317
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      706 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XM_003280317
      2.97% cov
    • Alignment Length
      21 bp
    • CIGAR string
      21M mismatches: 0 - insertions: 0 - deletions: 0
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301787628
      XM_002929185
      1 of 2 hits reported for Ailuropoda melanoleuca.
    • Hit length
      1,509 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XM_002929185
      1.39% cov
    • Alignment Length
      21 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297696181
      XM_002825240
      1 of 4 hits reported for Pongo abelii.
    • Hit length
      3,813 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XM_002825240
      0.55% cov
    • Alignment Length
      21 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:74136320
      NM_001032883
    • Hit length
      2,107 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NM_001032883
      1% cov
    • Alignment Length
      21 bp
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:73951003
      XM_545813
    • Hit length
      1,500 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XM_545813
      1.4% cov
    • Alignment Length
      21 bp
  • Herpestes ichneumon

    Herpestes ichneumon

    • Public DB hit
      GI:215478443
      EU847279
    • Hit length
      963 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      EU847279
      2.18% cov
    • Alignment Length
      21 bp
Occurrence
20 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
4
Length
22
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:219521816
      NG_009216
      1 of 12 hits reported for Homo sapiens.
    • Hit length
      145,524 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NG_009216
      0.02% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332843382
      XM_001164055
      1 of 5 hits reported for Pan troglodytes.
    • Hit length
      4,820 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XM_001164055
      0.46% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332266972
      XM_003282417
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      3,120 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XM_003282417
      0.71% cov
    • Alignment Length
      22 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297696181
      XM_002825240
      1 of 4 hits reported for Pongo abelii.
    • Hit length
      3,813 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XM_002825240
      0.58% cov
    • Alignment Length
      22 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:74136320
      NM_001032883
      1 of 2 hits reported for Macaca mulatta.
    • Hit length
      2,107 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NM_001032883
      1.04% cov
    • Alignment Length
      22 bp
Occurrence
20 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
5
Length
22
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332819353
      XM_526778
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      2,268 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XM_526778
      0.97% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297712741
      XM_002832850
      1 of 2 hits reported for Pongo abelii.
    • Hit length
      2,272 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XM_002832850
      0.97% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296196679
      XM_002745898
      1 of 2 hits reported for Callithrix jacchus.
    • Hit length
      1,455 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XM_002745898
      1.51% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:70995129
      NM_017581
      1 of 8 hits reported for Homo sapiens.
    • Hit length
      1,892 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NM_017581
      1.16% cov
    • Alignment Length
      22 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:313883079
      HQ258272
      1 of 3 hits reported for synthetic construct.
    • Hit length
      1,474 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      HQ258272
      1.49% cov
    • Alignment Length
      22 bp
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332219023
      XM_003258610
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      2,274 bp
    • E Value
      1.57E0
    • BLAST Score
      36.2 bits
    • Similarity
      95.45%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XM_003258610
      0.97% cov
    • Alignment Length
      22 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297292474
      XM_001094288
      1 of 2 hits reported for Macaca mulatta.
    • Hit length
      1,969 bp
    • E Value
      1.57E0
    • BLAST Score
      36.2 bits
    • Similarity
      95.45%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XM_001094288
      1.12% cov
    • Alignment Length
      22 bp
Occurrence
19 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
6
Length
22
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332819353
      XM_526778
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      2,268 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_526778
      0.97% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332219023
      XM_003258610
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      2,274 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_003258610
      0.97% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297712741
      XM_002832850
      1 of 2 hits reported for Pongo abelii.
    • Hit length
      2,272 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_002832850
      0.97% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297292474
      XM_001094288
      1 of 2 hits reported for Macaca mulatta.
    • Hit length
      1,969 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_001094288
      1.12% cov
    • Alignment Length
      22 bp
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:70995129
      NM_017581
      1 of 7 hits reported for Homo sapiens.
    • Hit length
      1,892 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NM_017581
      1.16% cov
    • Alignment Length
      22 bp
Occurrence
19 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
7
Length
22
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:193788647
      NG_008172
      1 of 3 hits reported for Homo sapiens.
    • Hit length
      23,881 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NG_008172
      0.09% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:335308454
      XM_003361188
      1 of 6 hits reported for Sus scrofa.
    • Hit length
      1,736 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XM_003361188
      1.27% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332814780
      XM_003309319
      1 of 7 hits reported for Pan troglodytes.
    • Hit length
      1,671 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XM_003309319
      1.32% cov
    • Alignment Length
      22 bp
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332209369
      XM_003253737
    • Hit length
      2,077 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XM_003253737
      1.06% cov
    • Alignment Length
      22 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297668880
      XR_092994
    • Hit length
      1,994 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XR_092994
      1.1% cov
    • Alignment Length
      22 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297264356
      XM_001091711
    • Hit length
      1,981 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XM_001091711
      1.11% cov
    • Alignment Length
      22 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296204480
      XM_002749322
    • Hit length
      1,575 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XM_002749322
      1.4% cov
    • Alignment Length
      22 bp
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:194222327
      XM_001499557
    • Hit length
      1,574 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XM_001499557
      1.4% cov
    • Alignment Length
      22 bp
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:145966790
      NM_007389
    • Hit length
      4,288 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NM_007389
      0.51% cov
    • Alignment Length
      22 bp
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:13324699
      NM_024485
    • Hit length
      1,849 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NM_024485
      1.19% cov
    • Alignment Length
      22 bp
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:31341406
      NM_176664
    • Hit length
      3,618 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NM_176664
      0.61% cov
    • Alignment Length
      22 bp
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:50978865
      NM_001003144
    • Hit length
      1,380 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NM_001003144
      1.59% cov
    • Alignment Length
      22 bp
Occurrence
19 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
8
Length
22
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:193788647
      NG_008172
      1 of 3 hits reported for Homo sapiens.
    • Hit length
      23,881 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NG_008172
      0.09% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332814780
      XM_003309319
      1 of 12 hits reported for Pan troglodytes.
    • Hit length
      1,671 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XM_003309319
      1.32% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332209369
      XM_003253737
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      2,077 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XM_003253737
      1.06% cov
    • Alignment Length
      22 bp
  • Perodicticus potto

    Perodicticus potto

    • Public DB hit
      GI:302450561
      HM763497
    • Hit length
      390 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      HM763497
      5.64% cov
    • Alignment Length
      22 bp
  • Nycticebus pygmaeus

    Nycticebus pygmaeus

    • Public DB hit
      GI:302450560
      HM763496
    • Hit length
      389 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      HM763496
      5.66% cov
    • Alignment Length
      22 bp
  • Nycticebus bengalensis

    Nycticebus bengalensis

    • Public DB hit
      GI:302450558
      HM763494
    • Hit length
      388 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      HM763494
      5.67% cov
    • Alignment Length
      22 bp
  • Loris tardigradus

    Loris tardigradus

    • Public DB hit
      GI:302450557
      HM763493
    • Hit length
      387 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      HM763493
      5.68% cov
    • Alignment Length
      22 bp
  • Galago thomasi

    Galago thomasi

    • Public DB hit
      GI:302450556
      HM763492
    • Hit length
      378 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      HM763492
      5.82% cov
    • Alignment Length
      22 bp
  • Galago senegalensis

    Galago senegalensis

    • Public DB hit
      GI:302450555
      HM763491
    • Hit length
      386 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      HM763491
      5.7% cov
    • Alignment Length
      22 bp
  • Otolemur garnettii

    Otolemur garnettii

    • Public DB hit
      GI:302450554
      HM763490
    • Hit length
      378 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      HM763490
      5.82% cov
    • Alignment Length
      22 bp
  • Arctocebus calabarensis

    Arctocebus calabarensis

    • Public DB hit
      GI:302450553
      HM763489
    • Hit length
      379 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      HM763489
      5.8% cov
    • Alignment Length
      22 bp
Occurrence
19 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
9
Length
22
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:219521816
      NG_009216
      1 of 20 hits reported for Homo sapiens.
    • Hit length
      145,524 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      NG_009216
      0.02% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332843382
      XM_001164055
      1 of 5 hits reported for Pan troglodytes.
    • Hit length
      4,820 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XM_001164055
      0.46% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
22 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
10
Length
20
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:219521816
      NG_009216
      1 of 12 hits reported for Homo sapiens.
    • Hit length
      145,524 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      NG_009216
      0.01% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332843382
      XM_001164055
      1 of 5 hits reported for Pan troglodytes.
    • Hit length
      4,820 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XM_001164055
      0.41% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297696181
      XM_002825240
      1 of 4 hits reported for Pongo abelii.
    • Hit length
      3,813 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XM_002825240
      0.52% cov
    • Alignment Length
      20 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296214318
      XM_002753603
      1 of 2 hits reported for Callithrix jacchus.
    • Hit length
      1,116 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XM_002753603
      1.79% cov
    • Alignment Length
      20 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:74136320
      NM_001032883
      1 of 2 hits reported for Macaca mulatta.
    • Hit length
      2,107 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      NM_001032883
      0.95% cov
    • Alignment Length
      20 bp
Occurrence
19 times in PatSeqDB
Tools
PatSeq Finder

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