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Search for Biological Sequences disclosed in Patents

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Data obtained from: DDBJ Pat NCBI GenBank (EBI) EMBL-EBI Pat EPO Sequence Listings
184 sequences found in this patent (in total)

Displaying 1 - 10 of 184 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
1,884
Type
DNA
Locations
Undetermined

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:93204870
      NM_021229
      1 of 11 hits reported for Homo sapiens.
    • Hit length
      3,634 bp
    • E Value
      0E0
    • BLAST Score
      3,424.8 bits
    • Similarity
      99.47%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      NM_021229
      51.87% cov
    • Alignment Length
      1,885 bp
    • CIGAR string
      36MN509MN153MN258MN33MN63MN297MN188MN220MN106MI12M mismatches: 9 - insertions: 1 - deletions: 0
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:168277681
      AB384963
    • Hit length
      1,901 bp
    • E Value
      0E0
    • BLAST Score
      3,423 bits
    • Similarity
      99.47%
    • Coverage
      99.95%
    • Alignment (schematic)

      SEQ ID NO 1
      99.95% cov
      AB384963
      99.11% cov
    • Alignment Length
      1,884 bp
    • CIGAR string
      36MN509MN153MN258MN33MN63MN297MN188MN220MN106MI11M1H mismatches: 9 - insertions: 1 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:197097357
      NM_001132088
    • Hit length
      3,354 bp
    • E Value
      0E0
    • BLAST Score
      3,286.3 bits
    • Similarity
      98.14%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      NM_001132088
      56.2% cov
    • Alignment Length
      1,885 bp
    • CIGAR string
      36MN4MN207MN22MN17MN11MN29MN35MN24MN55MN83MN12MN139MN13MN27MN104MN106MN18MN33MN63MN12MN26MN9MN73MN106MN124MN8MN35MN58MN5MN20MN220MN16MN10MN78MI12M mismatches: 34 - insertions: 1 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332840086
      XM_003313870
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      3,208 bp
    • E Value
      0E0
    • BLAST Score
      3,282.6 bits
    • Similarity
      99.02%
    • Coverage
      97.19%
    • Alignment (schematic)

      SEQ ID NO 1
      97.19% cov
      XM_003313870
      57.11% cov
    • Alignment Length
      1,832 bp
    • CIGAR string
      53H183MN12MN217MN68MN9MN99MN53MN258MN33MNMN61MN12MN36MN180MN66MN188MN220MN106MI12M mismatches: 17 - insertions: 1 - deletions: 0
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297263293
      XM_001107505
    • Hit length
      3,625 bp
    • E Value
      0E0
    • BLAST Score
      3,219.8 bits
    • Similarity
      97.51%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XM_001107505
      52% cov
    • Alignment Length
      1,885 bp
    • CIGAR string
      36MN39MN172MN40MN20MN81MN2MN57MN24MN14MN23MN4MN9MN12MN134MN4MN13MN222MN11MN23MN20MN12MN19MN43MN6MN5MN36MN73MN56MN23MN25MN66MN8MN11MN10MN7MN22MN62MN14MN37MN9MN14MN205MN16MNMN87MI2MN9M mismatches: 46 - insertions: 1 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332221165
      XM_003259684
    • Hit length
      3,121 bp
    • E Value
      0E0
    • BLAST Score
      3,171.8 bits
    • Similarity
      97.93%
    • Coverage
      97.19%
    • Alignment (schematic)

      SEQ ID NO 1
      97.19% cov
      XM_003259684
      58.7% cov
    • Alignment Length
      1,832 bp
    • CIGAR string
      53H93MN102MN40MN20MN68MN12MN22MN77MN38MN12MNMN137MN13MN69MN8MN53MN101MN23MN10MN22MN63MN6MN5MN36MN58MN121MN66MN19MN78MN79MN9MN173MN46MN16MN45MN9MN33MI4MN7M mismatches: 37 - insertions: 1 - deletions: 0
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296212615
      XM_002752876
      1 of 2 hits reported for Callithrix jacchus.
    • Hit length
      2,320 bp
    • E Value
      0E0
    • BLAST Score
      3,014.9 bits
    • Similarity
      95.65%
    • Coverage
      99.89%
    • Alignment (schematic)

      SEQ ID NO 1
      99.89% cov
      XM_002752876
      80.78% cov
    • Alignment Length
      1,883 bp
    • CIGAR string
      7MNMN26MN31MN3M3DMD2M5D38MN9MN116MN13MN33MN10MN16M2N41MN24MN2MN79MN5MN50MN12MN71MN81MN45MN29MN20MN2MN8MN14MN19MN33MN47MN4MN3MN8MN14MN33MN22MN18MN21MN3MN35MN8M2N73MN11MN15MN4MN12MN57MN2MN42MN17MN26MN10MN7MN44MN19M2N12MN5MN6MN11MN17MN16MN4MN4MN71MN51MN25MN14MN55MN16MN40MN48MI10M2H mismatches: 72 - insertions: 1 - deletions: 9
Occurrence
9 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
628
Type
peptide
Locations
Undetermined

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:93204871
      NP_067052
      1 of 8 hits reported for Homo sapiens.
    • Hit length
      628 aa
    • E Value
      0E0
    • BLAST Score
      1,286.2 bits
    • Similarity
      98.88%
    • Coverage
      99.52%
    • Alignment (schematic)

      SEQ ID NO 2
      99.52% cov
      NP_067052
      99.52% cov
    • Alignment Length
      625 aa
    • CIGAR string
      12MN169MN50MN97MN20MN161MN73MN35MN3H mismatches: 8 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:197097358
      NP_001125560
    • Hit length
      628 aa
    • E Value
      0E0
    • BLAST Score
      1,269.6 bits
    • Similarity
      98.4%
    • Coverage
      99.52%
    • Alignment (schematic)

      SEQ ID NO 2
      99.52% cov
      NP_001125560
      99.52% cov
    • Alignment Length
      625 aa
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:109098260
      XP_001107505
    • Hit length
      628 aa
    • E Value
      0E0
    • BLAST Score
      1,265 bits
    • Similarity
      98.08%
    • Coverage
      99.52%
    • Alignment (schematic)

      SEQ ID NO 2
      99.52% cov
      XP_001107505
      99.52% cov
    • Alignment Length
      625 aa
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296212616
      XP_002752922
    • Hit length
      625 aa
    • E Value
      0E0
    • BLAST Score
      1,229.2 bits
    • Similarity
      96.48%
    • Coverage
      99.52%
    • Alignment (schematic)

      SEQ ID NO 2
      99.52% cov
      XP_002752922
      99.52% cov
    • Alignment Length
      625 aa
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332840087
      XP_003313918
    • Hit length
      591 aa
    • E Value
      0E0
    • BLAST Score
      1,208 bits
    • Similarity
      98.98%
    • Coverage
      93.47%
    • Alignment (schematic)

      SEQ ID NO 2
      93.47% cov
      XP_003313918
      99.32% cov
    • Alignment Length
      587 aa
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332221166
      XP_003259732
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      591 aa
    • E Value
      0E0
    • BLAST Score
      1,201.4 bits
    • Similarity
      98.47%
    • Coverage
      93.47%
    • Alignment (schematic)

      SEQ ID NO 2
      93.47% cov
      XP_003259732
      99.32% cov
    • Alignment Length
      587 aa
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:73978205
      XP_532655
      1 of 2 hits reported for Canis lupus familiaris.
    • Hit length
      628 aa
    • E Value
      0E0
    • BLAST Score
      1,201.4 bits
    • Similarity
      94.4%
    • Coverage
      99.52%
    • Alignment (schematic)

      SEQ ID NO 2
      99.52% cov
      XP_532655
      99.52% cov
    • Alignment Length
      625 aa
  • Oryctolagus cuniculus

    Oryctolagus cuniculus

    • Public DB hit
      GI:291389753
      XP_002711255
      1 of 2 hits reported for Oryctolagus cuniculus.
    • Hit length
      625 aa
    • E Value
      0E0
    • BLAST Score
      1,187.2 bits
    • Similarity
      94.25%
    • Coverage
      99.52%
    • Alignment (schematic)

      SEQ ID NO 2
      99.52% cov
      XP_002711255
      99.52% cov
    • Alignment Length
      626 aa
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:156121053
      NP_001095673
      1 of 2 hits reported for Bos taurus.
    • Hit length
      627 aa
    • E Value
      0E0
    • BLAST Score
      1,187.2 bits
    • Similarity
      94.72%
    • Coverage
      99.52%
    • Alignment (schematic)

      SEQ ID NO 2
      99.52% cov
      NP_001095673
      99.52% cov
    • Alignment Length
      625 aa
Occurrence
11 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
3
Length
1,827
Type
DNA
Locations
Undetermined

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:93204870
      NM_021229
      1 of 11 hits reported for Homo sapiens.
    • Hit length
      3,634 bp
    • E Value
      0E0
    • BLAST Score
      3,325.1 bits
    • Similarity
      99.51%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NM_021229
      50.3% cov
    • Alignment Length
      1,828 bp
    • CIGAR string
      489MN153MN258MN33MN63MN297MN188MN220MN106MI12M mismatches: 8 - insertions: 1 - deletions: 0
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:168277681
      AB384963
    • Hit length
      1,901 bp
    • E Value
      0E0
    • BLAST Score
      3,323.2 bits
    • Similarity
      99.51%
    • Coverage
      99.95%
    • Alignment (schematic)

      SEQ ID NO 3
      99.95% cov
      AB384963
      96.11% cov
    • Alignment Length
      1,827 bp
    • CIGAR string
      489MN153MN258MN33MN63MN297MN188MN220MN106MI11M1H mismatches: 8 - insertions: 1 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332840088
      XM_522498
      1 of 4 hits reported for Pan troglodytes.
    • Hit length
      3,148 bp
    • E Value
      0E0
    • BLAST Score
      3,275.2 bits
    • Similarity
      99.02%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XM_522498
      58.07% cov
    • Alignment Length
      1,828 bp
    • CIGAR string
      179MN12MN217MN68MN9MN99MN53MN258MN33MNMN61MN12MN36MN180MN66MN188MN220MN106MI12M mismatches: 17 - insertions: 1 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:197097357
      NM_001132088
    • Hit length
      3,354 bp
    • E Value
      0E0
    • BLAST Score
      3,192.1 bits
    • Similarity
      98.19%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NM_001132088
      54.5% cov
    • Alignment Length
      1,828 bp
    • CIGAR string
      192MN22MN17MN11MN29MN35MN24MN55MN83MN12MN139MN13MN27MN104MN106MN18MN33MN63MN12MN26MN9MN73MN106MN124MN8MN35MN58MN5MN20MN220MN16MN10MN78MI12M mismatches: 32 - insertions: 1 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332221165
      XM_003259684
    • Hit length
      3,121 bp
    • E Value
      0E0
    • BLAST Score
      3,164.4 bits
    • Similarity
      97.92%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XM_003259684
      58.57% cov
    • Alignment Length
      1,828 bp
    • CIGAR string
      89MN102MN40MN20MN68MN12MN22MN77MN38MN12MNMN137MN13MN69MN8MN53MN101MN23MN10MN22MN63MN6MN5MN36MN58MN121MN66MN19MN78MN79MN9MN173MN46MN16MN45MN9MN33MI4MN7M mismatches: 37 - insertions: 1 - deletions: 0
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297263293
      XM_001107505
    • Hit length
      3,625 bp
    • E Value
      0E0
    • BLAST Score
      3,120.1 bits
    • Similarity
      97.48%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XM_001107505
      50.43% cov
    • Alignment Length
      1,828 bp
    • CIGAR string
      19MN172MN40MN20MN81MN2MN57MN24MN14MN23MN4MN9MN12MN134MN4MN13MN222MN11MN23MN20MN12MN19MN43MN6MN5MN36MN73MN56MN23MN25MN66MN8MN11MN10MN7MN22MN62MN14MN37MN9MN14MN205MN16MNMN87MI2MN9M mismatches: 45 - insertions: 1 - deletions: 0
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296212619
      XM_002752878
      1 of 3 hits reported for Callithrix jacchus.
    • Hit length
      1,971 bp
    • E Value
      0E0
    • BLAST Score
      2,939.1 bits
    • Similarity
      96.16%
    • Coverage
      98.41%
    • Alignment (schematic)

      SEQ ID NO 3
      98.41% cov
      XM_002752878
      91.27% cov
    • Alignment Length
      1,799 bp
    • CIGAR string
      27H38MN9MN116MN13MN33MN10MN16M2N41MN24MN2MN79MN5MN50MN12MN71MN81MN45MN29MN20MN2MN8MN14MN19MN33MN47MN4MN3MN8MN14MN33MN22MN18MN21MN3MN35MN8M2N73MN11MN15MN4MN12MN57MN2MN42MN17MN26MN10MN7MN44MN19M2N12MN5MN6MN11MN17MN16MN4MN4MN71MN51MN25MN14MN55MN16MN40MN48MI10M2H mismatches: 68 - insertions: 1 - deletions: 0
Occurrence
6 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
4
Length
609
Type
peptide
Locations
Undetermined

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:93204871
      NP_067052
      1 of 8 hits reported for Homo sapiens.
    • Hit length
      628 aa
    • E Value
      0E0
    • BLAST Score
      1,252.7 bits
    • Similarity
      99.01%
    • Coverage
      99.51%
    • Alignment (schematic)

      SEQ ID NO 4
      99.51% cov
      NP_067052
      96.5% cov
    • Alignment Length
      606 aa
    • CIGAR string
      163MN50MN97MN20MN161MN73MN35MN3H mismatches: 7 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:197097358
      NP_001125560
    • Hit length
      628 aa
    • E Value
      0E0
    • BLAST Score
      1,234.6 bits
    • Similarity
      98.51%
    • Coverage
      99.51%
    • Alignment (schematic)

      SEQ ID NO 4
      99.51% cov
      NP_001125560
      96.5% cov
    • Alignment Length
      606 aa
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:109098260
      XP_001107505
    • Hit length
      628 aa
    • E Value
      0E0
    • BLAST Score
      1,229.9 bits
    • Similarity
      98.18%
    • Coverage
      99.51%
    • Alignment (schematic)

      SEQ ID NO 4
      99.51% cov
      XP_001107505
      96.5% cov
    • Alignment Length
      606 aa
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332840087
      XP_003313918
    • Hit length
      591 aa
    • E Value
      0E0
    • BLAST Score
      1,207.6 bits
    • Similarity
      98.81%
    • Coverage
      96.55%
    • Alignment (schematic)

      SEQ ID NO 4
      96.55% cov
      XP_003313918
      99.49% cov
    • Alignment Length
      588 aa
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296212616
      XP_002752922
      1 of 2 hits reported for Callithrix jacchus.
    • Hit length
      625 aa
    • E Value
      0E0
    • BLAST Score
      1,201.8 bits
    • Similarity
      97.02%
    • Coverage
      99.34%
    • Alignment (schematic)

      SEQ ID NO 4
      99.34% cov
      XP_002752922
      96.8% cov
    • Alignment Length
      605 aa
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332221166
      XP_003259732
    • Hit length
      591 aa
    • E Value
      0E0
    • BLAST Score
      1,199.9 bits
    • Similarity
      98.3%
    • Coverage
      96.55%
    • Alignment (schematic)

      SEQ ID NO 4
      96.55% cov
      XP_003259732
      99.49% cov
    • Alignment Length
      588 aa
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:73978205
      XP_532655
    • Hit length
      628 aa
    • E Value
      0E0
    • BLAST Score
      1,170.6 bits
    • Similarity
      94.55%
    • Coverage
      99.51%
    • Alignment (schematic)

      SEQ ID NO 4
      99.51% cov
      XP_532655
      96.5% cov
    • Alignment Length
      606 aa
  • Oryctolagus cuniculus

    Oryctolagus cuniculus

    • Public DB hit
      GI:291389753
      XP_002711255
    • Hit length
      625 aa
    • E Value
      0E0
    • BLAST Score
      1,166.4 bits
    • Similarity
      94.88%
    • Coverage
      99.51%
    • Alignment (schematic)

      SEQ ID NO 4
      99.51% cov
      XP_002711255
      96.96% cov
    • Alignment Length
      606 aa
Occurrence
8 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
5
Length
765
Type
DNA
Locations
Undetermined

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:15488928
      BC013591
      1 of 15 hits reported for Homo sapiens.
    • Hit length
      2,706 bp
    • E Value
      0E0
    • BLAST Score
      1,395.3 bits
    • Similarity
      99.61%
    • Coverage
      99.87%
    • Alignment (schematic)

      SEQ ID NO 5
      99.87% cov
      BC013591
      28.23% cov
    • Alignment Length
      764 bp
    • CIGAR string
      179MN33MN63MN486M1H mismatches: 3 - insertions: 0 - deletions: 0
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:168277681
      AB384963
    • Hit length
      1,901 bp
    • E Value
      0E0
    • BLAST Score
      1,389.8 bits
    • Similarity
      99.48%
    • Coverage
      99.87%
    • Alignment (schematic)

      SEQ ID NO 5
      99.87% cov
      AB384963
      40.19% cov
    • Alignment Length
      764 bp
    • CIGAR string
      179MN33MN63MN297MN188M1H mismatches: 4 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332840088
      XM_522498
      1 of 4 hits reported for Pan troglodytes.
    • Hit length
      3,148 bp
    • E Value
      0E0
    • BLAST Score
      1,367.6 bits
    • Similarity
      98.95%
    • Coverage
      99.87%
    • Alignment (schematic)

      SEQ ID NO 5
      99.87% cov
      XM_522498
      24.27% cov
    • Alignment Length
      764 bp
    • CIGAR string
      179MN33MNMN61MN12MN36MN180MN66MN188M1H mismatches: 8 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:55729447
      CR859277
      1 of 3 hits reported for Pongo abelii.
    • Hit length
      2,748 bp
    • E Value
      0E0
    • BLAST Score
      1,334.4 bits
    • Similarity
      98.17%
    • Coverage
      99.87%
    • Alignment (schematic)

      SEQ ID NO 5
      99.87% cov
      CR859277
      27.8% cov
    • Alignment Length
      764 bp
    • CIGAR string
      53MN106MN18MN33MN63MN12MN26MN9MN73MN106MN124MN44MN58MN5MN20M1H mismatches: 14 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332221165
      XM_003259684
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      3,121 bp
    • E Value
      0E0
    • BLAST Score
      1,328.9 bits
    • Similarity
      98.04%
    • Coverage
      99.87%
    • Alignment (schematic)

      SEQ ID NO 5
      99.87% cov
      XM_003259684
      24.48% cov
    • Alignment Length
      764 bp
    • CIGAR string
      53MN101MN23MN10MN22MN63MN6MN5MN36MN58MN121MN66MN19MN78MN79MN9M1H mismatches: 15 - insertions: 0 - deletions: 0
Occurrence
6 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
6
Length
255
Type
peptide
Locations
Undetermined

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:189055156
      BAG38140
      1 of 10 hits reported for Homo sapiens.
    • Hit length
      628 aa
    • E Value
      5.66E-149
    • BLAST Score
      531.6 bits
    • Similarity
      99.61%
    • Coverage
      99.61%
    • Alignment (schematic)

      SEQ ID NO 6
      99.61% cov
      BAG38140
      40.45% cov
    • Alignment Length
      254 aa
    • CIGAR string
      71MN20MN161M1H mismatches: 2 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332840087
      XP_003313918
    • Hit length
      591 aa
    • E Value
      1.93E-147
    • BLAST Score
      526.6 bits
    • Similarity
      99.21%
    • Coverage
      99.61%
    • Alignment (schematic)

      SEQ ID NO 6
      99.61% cov
      XP_003313918
      42.98% cov
    • Alignment Length
      254 aa
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332221166
      XP_003259732
    • Hit length
      591 aa
    • E Value
      4.56E-146
    • BLAST Score
      521.9 bits
    • Similarity
      98.43%
    • Coverage
      99.61%
    • Alignment (schematic)

      SEQ ID NO 6
      99.61% cov
      XP_003259732
      42.98% cov
    • Alignment Length
      254 aa
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:109098260
      XP_001107505
    • Hit length
      628 aa
    • E Value
      1.93E-145
    • BLAST Score
      520 bits
    • Similarity
      98.43%
    • Coverage
      99.61%
    • Alignment (schematic)

      SEQ ID NO 6
      99.61% cov
      XP_001107505
      40.45% cov
    • Alignment Length
      254 aa
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:197097358
      NP_001125560
      1 of 2 hits reported for Pongo abelii.
    • Hit length
      628 aa
    • E Value
      3.99E-145
    • BLAST Score
      518.8 bits
    • Similarity
      98.43%
    • Coverage
      99.61%
    • Alignment (schematic)

      SEQ ID NO 6
      99.61% cov
      NP_001125560
      40.45% cov
    • Alignment Length
      254 aa
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296212616
      XP_002752922
      1 of 2 hits reported for Callithrix jacchus.
    • Hit length
      625 aa
    • E Value
      1.47E-139
    • BLAST Score
      500.4 bits
    • Similarity
      96.44%
    • Coverage
      99.22%
    • Alignment (schematic)

      SEQ ID NO 6
      99.22% cov
      XP_002752922
      40.48% cov
    • Alignment Length
      253 aa
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:76363262
      Q9JI33
    • Hit length
      628 aa
    • E Value
      1.55E-134
    • BLAST Score
      483.4 bits
    • Similarity
      94.49%
    • Coverage
      99.61%
    • Alignment (schematic)

      SEQ ID NO 6
      99.61% cov
      Q9JI33
      40.45% cov
    • Alignment Length
      254 aa
Occurrence
8 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
7
Length
1,545
Type
DNA
Locations
Undetermined

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:93204870
      NM_021229
      1 of 12 hits reported for Homo sapiens.
    • Hit length
      3,634 bp
    • E Value
      0E0
    • BLAST Score
      2,813.6 bits
    • Similarity
      99.55%
    • Coverage
      99.94%
    • Alignment (schematic)

      SEQ ID NO 7
      99.94% cov
      NM_021229
      42.49% cov
    • Alignment Length
      1,544 bp
    • CIGAR string
      36MN509MN153MN258MN33MN63MN297MN188M1H mismatches: 7 - insertions: 0 - deletions: 0
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:168277681
      AB384963
    • Hit length
      1,901 bp
    • E Value
      0E0
    • BLAST Score
      2,813.6 bits
    • Similarity
      99.55%
    • Coverage
      99.94%
    • Alignment (schematic)

      SEQ ID NO 7
      99.94% cov
      AB384963
      81.22% cov
    • Alignment Length
      1,544 bp
    • CIGAR string
      36MN509MN153MN258MN33MN63MN297MN188M1H mismatches: 7 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:197097357
      NM_001132088
    • Hit length
      3,354 bp
    • E Value
      0E0
    • BLAST Score
      2,686.1 bits
    • Similarity
      98.06%
    • Coverage
      99.94%
    • Alignment (schematic)

      SEQ ID NO 7
      99.94% cov
      NM_001132088
      46.03% cov
    • Alignment Length
      1,544 bp
    • CIGAR string
      36MN4MN207MN22MN17MN11MN29MN35MN24MN55MN83MN12MN139MN13MN27MN104MN106MN18MN33MN63MN12MN26MN9MN73MN106MN124MN8MN35MN58MN5MN20M1H mismatches: 30 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332840086
      XM_003313870
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      3,208 bp
    • E Value
      0E0
    • BLAST Score
      2,671.4 bits
    • Similarity
      98.99%
    • Coverage
      96.5%
    • Alignment (schematic)

      SEQ ID NO 7
      96.5% cov
      XM_003313870
      46.48% cov
    • Alignment Length
      1,491 bp
    • CIGAR string
      53H183MN12MN217MN68MN9MN99MN53MN258MN33MNMN61MN12MN36MN180MN66MN188M1H mismatches: 15 - insertions: 0 - deletions: 0
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297263293
      XM_001107505
    • Hit length
      3,625 bp
    • E Value
      0E0
    • BLAST Score
      2,630.7 bits
    • Similarity
      97.41%
    • Coverage
      99.94%
    • Alignment (schematic)

      SEQ ID NO 7
      99.94% cov
      XM_001107505
      42.59% cov
    • Alignment Length
      1,544 bp
    • CIGAR string
      36MN39MN172MN40MN20MN81MN2MN57MN24MN14MN23MN4MN9MN12MN134MN4MN13MN222MN11MN23MN20MN12MN19MN43MN6MN5MN36MN73MN56MN23MN25MN66MN8MN11MN10MN7MN22MN62MN14MN37MN9M1H mismatches: 40 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332221165
      XM_003259684
    • Hit length
      3,121 bp
    • E Value
      0E0
    • BLAST Score
      2,588.3 bits
    • Similarity
      97.99%
    • Coverage
      96.5%
    • Alignment (schematic)

      SEQ ID NO 7
      96.5% cov
      XM_003259684
      47.77% cov
    • Alignment Length
      1,491 bp
    • CIGAR string
      53H93MN102MN40MN20MN68MN12MN22MN77MN38MN12MNMN137MN13MN69MN8MN53MN101MN23MN10MN22MN63MN6MN5MN36MN58MN121MN66MN19MN78MN79MN9M1H mismatches: 30 - insertions: 0 - deletions: 0
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296212615
      XM_002752876
    • Hit length
      2,320 bp
    • E Value
      0E0
    • BLAST Score
      2,438.7 bits
    • Similarity
      95.27%
    • Coverage
      99.94%
    • Alignment (schematic)

      SEQ ID NO 7
      99.94% cov
      XM_002752876
      66.16% cov
    • Alignment Length
      1,544 bp
    • CIGAR string
      7MNMN26MN31MN3M3DMD2M5D38MN9MN116MN13MN33MN10MN16M2N41MN24MN2MN79MN5MN50MN12MN71MN81MN45MN29MN20MN2MN8MN14MN19MN33MN47MN4MN3MN8MN14MN33MN22MN18MN21MN3MN35MN8M2N73MN11MN15MN4MN12MN57MN2MN42MN17MN26MN10MN7MN44MN19M2N12MN5MN6MN11MN17MN16MN4MN4M1H mismatches: 64 - insertions: 0 - deletions: 9
Occurrence
6 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
8
Length
515
Type
peptide
Locations
Undetermined

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:93204871
      NP_067052
      1 of 8 hits reported for Homo sapiens.
    • Hit length
      628 aa
    • E Value
      0E0
    • BLAST Score
      1,063.1 bits
    • Similarity
      99.22%
    • Coverage
      99.81%
    • Alignment (schematic)

      SEQ ID NO 8
      99.81% cov
      NP_067052
      81.85% cov
    • Alignment Length
      514 aa
    • CIGAR string
      12MN169MN50MN97MN20MN161M1H mismatches: 5 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:197097358
      NP_001125560
    • Hit length
      628 aa
    • E Value
      0E0
    • BLAST Score
      1,046.2 bits
    • Similarity
      98.64%
    • Coverage
      99.81%
    • Alignment (schematic)

      SEQ ID NO 8
      99.81% cov
      NP_001125560
      81.85% cov
    • Alignment Length
      514 aa
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:109098260
      XP_001107505
    • Hit length
      628 aa
    • E Value
      0E0
    • BLAST Score
      1,041.6 bits
    • Similarity
      98.25%
    • Coverage
      99.81%
    • Alignment (schematic)

      SEQ ID NO 8
      99.81% cov
      XP_001107505
      81.85% cov
    • Alignment Length
      514 aa
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296212616
      XP_002752922
      1 of 2 hits reported for Callithrix jacchus.
    • Hit length
      625 aa
    • E Value
      0E0
    • BLAST Score
      1,007.7 bits
    • Similarity
      96.49%
    • Coverage
      99.61%
    • Alignment (schematic)

      SEQ ID NO 8
      99.61% cov
      XP_002752922
      81.6% cov
    • Alignment Length
      513 aa
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:73978205
      XP_532655
    • Hit length
      628 aa
    • E Value
      0E0
    • BLAST Score
      987.3 bits
    • Similarity
      94.16%
    • Coverage
      99.81%
    • Alignment (schematic)

      SEQ ID NO 8
      99.81% cov
      XP_532655
      81.85% cov
    • Alignment Length
      514 aa
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332840087
      XP_003313918
    • Hit length
      591 aa
    • E Value
      0E0
    • BLAST Score
      985.3 bits
    • Similarity
      99.16%
    • Coverage
      92.62%
    • Alignment (schematic)

      SEQ ID NO 8
      92.62% cov
      XP_003313918
      80.71% cov
    • Alignment Length
      477 aa
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332221166
      XP_003259732
    • Hit length
      591 aa
    • E Value
      0E0
    • BLAST Score
      981.1 bits
    • Similarity
      98.74%
    • Coverage
      92.62%
    • Alignment (schematic)

      SEQ ID NO 8
      92.62% cov
      XP_003259732
      80.71% cov
    • Alignment Length
      477 aa
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301767738
      XP_002919283
    • Hit length
      627 aa
    • E Value
      0E0
    • BLAST Score
      976.1 bits
    • Similarity
      94.55%
    • Coverage
      99.81%
    • Alignment (schematic)

      SEQ ID NO 8
      99.81% cov
      XP_002919283
      81.82% cov
    • Alignment Length
      514 aa
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:157817109
      NP_001100250
    • Hit length
      630 aa
    • E Value
      0E0
    • BLAST Score
      974.9 bits
    • Similarity
      94.55%
    • Coverage
      99.81%
    • Alignment (schematic)

      SEQ ID NO 8
      99.81% cov
      NP_001100250
      81.59% cov
    • Alignment Length
      514 aa
Occurrence
8 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
9
Length
1,452
Type
DNA
Locations
Undetermined

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:93204870
      NM_021229
      1 of 12 hits reported for Homo sapiens.
    • Hit length
      3,634 bp
    • E Value
      0E0
    • BLAST Score
      2,647.4 bits
    • Similarity
      99.59%
    • Coverage
      99.93%
    • Alignment (schematic)

      SEQ ID NO 9
      99.93% cov
      NM_021229
      39.93% cov
    • Alignment Length
      1,451 bp
    • CIGAR string
      453MN153MN258MN33MN63MN297MN188M1H mismatches: 6 - insertions: 0 - deletions: 0
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:168277681
      AB384963
    • Hit length
      1,901 bp
    • E Value
      0E0
    • BLAST Score
      2,647.4 bits
    • Similarity
      99.59%
    • Coverage
      99.93%
    • Alignment (schematic)

      SEQ ID NO 9
      99.93% cov
      AB384963
      76.33% cov
    • Alignment Length
      1,451 bp
    • CIGAR string
      453MN153MN258MN33MN63MN297MN188M1H mismatches: 6 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332840088
      XM_522498
      1 of 4 hits reported for Pan troglodytes.
    • Hit length
      3,148 bp
    • E Value
      0E0
    • BLAST Score
      2,597.5 bits
    • Similarity
      98.97%
    • Coverage
      99.93%
    • Alignment (schematic)

      SEQ ID NO 9
      99.93% cov
      XM_522498
      46.09% cov
    • Alignment Length
      1,451 bp
    • CIGAR string
      143MN12MN217MN68MN9MN99MN53MN258MN33MNMN61MN12MN36MN180MN66MN188M1H mismatches: 15 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:197097357
      NM_001132088
    • Hit length
      3,354 bp
    • E Value
      0E0
    • BLAST Score
      2,525.5 bits
    • Similarity
      98.07%
    • Coverage
      99.93%
    • Alignment (schematic)

      SEQ ID NO 9
      99.93% cov
      NM_001132088
      43.26% cov
    • Alignment Length
      1,451 bp
    • CIGAR string
      156MN22MN17MN11MN29MN35MN24MN55MN83MN12MN139MN13MN27MN104MN106MN18MN33MN63MN12MN26MN9MN73MN106MN124MN8MN35MN58MN5MN20M1H mismatches: 28 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332221165
      XM_003259684
    • Hit length
      3,121 bp
    • E Value
      0E0
    • BLAST Score
      2,514.4 bits
    • Similarity
      97.93%
    • Coverage
      99.93%
    • Alignment (schematic)

      SEQ ID NO 9
      99.93% cov
      XM_003259684
      46.49% cov
    • Alignment Length
      1,451 bp
    • CIGAR string
      53MN102MN40MN20MN68MN12MN22MN77MN38MN12MNMN137MN13MN69MN8MN53MN101MN23MN10MN22MN63MN6MN5MN36MN58MN121MN66MN19MN78MN79MN9M1H mismatches: 30 - insertions: 0 - deletions: 0
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297263293
      XM_001107505
    • Hit length
      3,625 bp
    • E Value
      0E0
    • BLAST Score
      2,470.1 bits
    • Similarity
      97.38%
    • Coverage
      99.93%
    • Alignment (schematic)

      SEQ ID NO 9
      99.93% cov
      XM_001107505
      40.03% cov
    • Alignment Length
      1,451 bp
    • CIGAR string
      156MN40MN20MN81MN2MN57MN24MN14MN23MN4MN9MN12MN134MN4MN13MN222MN11MN23MN20MN12MN19MN43MN6MN5MN36MN73MN56MN23MN25MN66MN8MN11MN10MN7MN22MN62MN14MN37MN9M1H mismatches: 38 - insertions: 0 - deletions: 0
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296212619
      XM_002752878
      1 of 2 hits reported for Callithrix jacchus.
    • Hit length
      1,971 bp
    • E Value
      0E0
    • BLAST Score
      2,348.2 bits
    • Similarity
      95.86%
    • Coverage
      99.93%
    • Alignment (schematic)

      SEQ ID NO 9
      99.93% cov
      XM_002752878
      73.62% cov
    • Alignment Length
      1,451 bp
    • CIGAR string
      29MN9MN116MN13MN33MN10MN16M2N41MN24MN2MN79MN5MN50MN12MN71MN81MN45MN29MN20MN2MN8MN14MN19MN33MN47MN4MN3MN8MN14MN33MN22MN18MN21MN3MN35MN8M2N73MN11MN15MN4MN12MN57MN2MN42MN17MN26MN10MN7MN44MN19M2N12MN5MN6MN11MN17MN16MN4MN4M1H mismatches: 60 - insertions: 0 - deletions: 0
Occurrence
6 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
10
Length
484
Type
peptide
Locations
Undetermined

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:189055156
      BAG38140
      1 of 8 hits reported for Homo sapiens.
    • Hit length
      628 aa
    • E Value
      0E0
    • BLAST Score
      1,006.1 bits
    • Similarity
      99.38%
    • Coverage
      99.79%
    • Alignment (schematic)

      SEQ ID NO 10
      99.79% cov
      BAG38140
      76.91% cov
    • Alignment Length
      483 aa
    • CIGAR string
      151MN50MN97MN20MN161M1H mismatches: 4 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:197097358
      NP_001125560
    • Hit length
      628 aa
    • E Value
      0E0
    • BLAST Score
      988 bits
    • Similarity
      98.76%
    • Coverage
      99.79%
    • Alignment (schematic)

      SEQ ID NO 10
      99.79% cov
      NP_001125560
      76.91% cov
    • Alignment Length
      483 aa
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:109098260
      XP_001107505
    • Hit length
      628 aa
    • E Value
      0E0
    • BLAST Score
      986.1 bits
    • Similarity
      98.55%
    • Coverage
      99.79%
    • Alignment (schematic)

      SEQ ID NO 10
      99.79% cov
      XP_001107505
      76.91% cov
    • Alignment Length
      483 aa
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332840087
      XP_003313918
    • Hit length
      591 aa
    • E Value
      0E0
    • BLAST Score
      983.8 bits
    • Similarity
      99.16%
    • Coverage
      98.55%
    • Alignment (schematic)

      SEQ ID NO 10
      98.55% cov
      XP_003313918
      80.71% cov
    • Alignment Length
      477 aa
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332221166
      XP_003259732
    • Hit length
      591 aa
    • E Value
      0E0
    • BLAST Score
      980.3 bits
    • Similarity
      98.74%
    • Coverage
      98.55%
    • Alignment (schematic)

      SEQ ID NO 10
      98.55% cov
      XP_003259732
      80.71% cov
    • Alignment Length
      477 aa
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296212616
      XP_002752922
      1 of 3 hits reported for Callithrix jacchus.
    • Hit length
      625 aa
    • E Value
      0E0
    • BLAST Score
      964.1 bits
    • Similarity
      97.3%
    • Coverage
      99.59%
    • Alignment (schematic)

      SEQ ID NO 10
      99.59% cov
      XP_002752922
      77.12% cov
    • Alignment Length
      482 aa
  • Oryctolagus cuniculus

    Oryctolagus cuniculus

    • Public DB hit
      GI:291389753
      XP_002711255
    • Hit length
      625 aa
    • E Value
      0E0
    • BLAST Score
      932.2 bits
    • Similarity
      95.03%
    • Coverage
      99.79%
    • Alignment (schematic)

      SEQ ID NO 10
      99.79% cov
      XP_002711255
      77.28% cov
    • Alignment Length
      483 aa
Occurrence
8 times in PatSeqDB
Tools
PatSeq Finder

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