Process For Isolating Genes And The Gene Causative Of Huntington's Disease And Differential 3' Polyadenylation In The Gene

  • Published: Sep 29, 1994
  • Earliest Priority: Mar 25 1993
  • Family: 3
  • Cited Works: 8
  • Cited by: 3
  • Cites: 1
  • Sequences: 12
  • Additional Info: Cited Works Full text
Data obtained from: EMBL-EBI Pat DDBJ Pat EPO Sequence Listings NCBI GenBank (EBI)
12 sequences found in this patent (in total)

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Displaying 1 - 10 of 12 sequences

SEQ ID NO
Length
Sequence Type
Locations
Declared organism
Determined organism
Occurrence
Tools
SEQ ID NO
1
Length
210
Sequence Type
DNA
Locations
Undetermined
Declared organism
Unspecified
Determined organism
Occurrence
Tools
SEQ ID NO
2
Length
99
Sequence Type
peptide
Locations
Undetermined
Declared organism
Not specified
Determined organism
Occurrence
Tools
SEQ ID NO
3
Length
96
Sequence Type
DNA
Locations
Undetermined
Declared organism
Unspecified
Determined organism
Occurrence
Tools
SEQ ID NO
4
Length
38
Sequence Type
peptide
Locations
Undetermined
Declared organism
Not specified
Determined organism
Occurrence
Tools
SEQ ID NO
5
Length
380
Sequence Type
DNA
Locations
Undetermined
Declared organism
Unspecified
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:298670
      S56967
      1 of 25 hits reported for Homo sapiens.
    • Hit length
      380 bp
    • E Value
      0E0
    • BLAST Score
      702.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      S56967
      100% cov
    • Alignment Length
      380 bp
    • CIGAR string
      380M mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
2 times in PatSeqDB
Tools
SEQ ID NO
6
Length
757
Sequence Type
DNA
Locations
Undetermined
Declared organism
Unspecified
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:90903230
      NM_002111
      1 of 4 hits reported for Homo sapiens.
    • Hit length
      13,481 bp
    • E Value
      0E0
    • BLAST Score
      1,262.4 bits
    • Similarity
      96.63%
    • Coverage
      99.87%
    • Alignment (schematic)

      SEQ ID NO 6
      99.87% cov
      NM_002111
      5.69% cov
    • Alignment Length
      771 bp
    • CIGAR string
      1H38MN16MN152MI3MI16M4I4M2I22MI11MND106MIMN27MNI26MN55MI2MD23MI24MI4MD26MN115MI3MD71M mismatches: 7 - insertions: 15 - deletions: 4
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:225000683
      BC172756
    • Hit length
      9,496 bp
    • E Value
      0E0
    • BLAST Score
      1,262.4 bits
    • Similarity
      96.63%
    • Coverage
      99.87%
    • Alignment (schematic)

      SEQ ID NO 6
      99.87% cov
      BC172756
      8.08% cov
    • Alignment Length
      771 bp
    • CIGAR string
      1H38MN16MN152MI3MI16M4I4M2I22MI11MND106MIMN27MNI26MN55MI2MD23MI24MI4MD26MN115MI3MD71M mismatches: 7 - insertions: 15 - deletions: 4
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332818988
      XM_517080
    • Hit length
      13,621 bp
    • E Value
      0E0
    • BLAST Score
      1,234.7 bits
    • Similarity
      95.98%
    • Coverage
      99.87%
    • Alignment (schematic)

      SEQ ID NO 6
      99.87% cov
      XM_517080
      5.63% cov
    • Alignment Length
      771 bp
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332259986
      XM_003279017
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      10,341 bp
    • E Value
      0E0
    • BLAST Score
      1,190.4 bits
    • Similarity
      94.95%
    • Coverage
      99.87%
    • Alignment (schematic)

      SEQ ID NO 6
      99.87% cov
      XM_003279017
      7.42% cov
    • Alignment Length
      772 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297673011
      XM_002814525
      1 of 2 hits reported for Pongo abelii.
    • Hit length
      13,169 bp
    • E Value
      0E0
    • BLAST Score
      1,190.4 bits
    • Similarity
      94.95%
    • Coverage
      99.87%
    • Alignment (schematic)

      SEQ ID NO 6
      99.87% cov
      XM_002814525
      5.82% cov
    • Alignment Length
      772 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297281951
      XM_001086119
    • Hit length
      9,986 bp
    • E Value
      0E0
    • BLAST Score
      1,138.7 bits
    • Similarity
      93.88%
    • Coverage
      99.21%
    • Alignment (schematic)

      SEQ ID NO 6
      99.21% cov
      XM_001086119
      7.64% cov
    • Alignment Length
      768 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296196993
      XM_002746040
      1 of 2 hits reported for Callithrix jacchus.
    • Hit length
      9,285 bp
    • E Value
      0E0
    • BLAST Score
      1,090.6 bits
    • Similarity
      92.62%
    • Coverage
      99.87%
    • Alignment (schematic)

      SEQ ID NO 6
      99.87% cov
      XM_002746040
      8.26% cov
    • Alignment Length
      772 bp
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:194209358
      XM_001488793
    • Hit length
      9,303 bp
    • E Value
      0E0
    • BLAST Score
      813.6 bits
    • Similarity
      86.18%
    • Coverage
      99.87%
    • Alignment (schematic)

      SEQ ID NO 6
      99.87% cov
      XM_001488793
      8.24% cov
    • Alignment Length
      774 bp
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:73951764
      XM_536221
    • Hit length
      9,393 bp
    • E Value
      0E0
    • BLAST Score
      736.1 bits
    • Similarity
      87.03%
    • Coverage
      86.39%
    • Alignment (schematic)

      SEQ ID NO 6
      86.39% cov
      XM_536221
      7.08% cov
    • Alignment Length
      671 bp
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301762369
      XM_002916563
    • Hit length
      9,270 bp
    • E Value
      0E0
    • BLAST Score
      728.7 bits
    • Similarity
      86.66%
    • Coverage
      87.45%
    • Alignment (schematic)

      SEQ ID NO 6
      87.45% cov
      XM_002916563
      7.26% cov
    • Alignment Length
      682 bp
  • Oryctolagus cuniculus

    Oryctolagus cuniculus

    • Public DB hit
      GI:291412371
      XM_002722410
    • Hit length
      9,372 bp
    • E Value
      0E0
    • BLAST Score
      702.8 bits
    • Similarity
      83.66%
    • Coverage
      99.87%
    • Alignment (schematic)

      SEQ ID NO 6
      99.87% cov
      XM_002722410
      8.18% cov
    • Alignment Length
      777 bp
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:297476105
      XM_002688430
    • Hit length
      10,025 bp
    • E Value
      8.29E-149
    • BLAST Score
      536.6 bits
    • Similarity
      79.87%
    • Coverage
      99.87%
    • Alignment (schematic)

      SEQ ID NO 6
      99.87% cov
      XM_002688430
      7.65% cov
    • Alignment Length
      780 bp
Occurrence
Tools
SEQ ID NO
7
Length
584
Sequence Type
DNA
Locations
Undetermined
Declared organism
Unspecified
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:90903230
      NM_002111
      1 of 5 hits reported for Homo sapiens.
    • Hit length
      13,481 bp
    • E Value
      0E0
    • BLAST Score
      992.8 bits
    • Similarity
      97.44%
    • Coverage
      99.66%
    • Alignment (schematic)

      SEQ ID NO 7
      99.66% cov
      NM_002111
      4.32% cov
    • Alignment Length
      586 bp
    • CIGAR string
      56MI11MN17MI132MI34MD3MD25MN15MD13MN110MN75MN2M2NMN74MI3M2H mismatches: 8 - insertions: 4 - deletions: 3
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:225000683
      BC172756
    • Hit length
      9,496 bp
    • E Value
      0E0
    • BLAST Score
      992.8 bits
    • Similarity
      97.44%
    • Coverage
      99.66%
    • Alignment (schematic)

      SEQ ID NO 7
      99.66% cov
      BC172756
      6.14% cov
    • Alignment Length
      586 bp
    • CIGAR string
      56MI11MN17MI132MI34MD3MD25MN15MD13MN110MN75MN2M2NMN74MI3M2H mismatches: 8 - insertions: 4 - deletions: 3
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332818988
      XM_517080
    • Hit length
      13,621 bp
    • E Value
      0E0
    • BLAST Score
      959.5 bits
    • Similarity
      96.42%
    • Coverage
      99.66%
    • Alignment (schematic)

      SEQ ID NO 7
      99.66% cov
      XM_517080
      4.28% cov
    • Alignment Length
      586 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297673011
      XM_002814525
    • Hit length
      13,169 bp
    • E Value
      0E0
    • BLAST Score
      926.3 bits
    • Similarity
      95.39%
    • Coverage
      99.66%
    • Alignment (schematic)

      SEQ ID NO 7
      99.66% cov
      XM_002814525
      4.43% cov
    • Alignment Length
      586 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297281951
      XM_001086119
    • Hit length
      9,986 bp
    • E Value
      0E0
    • BLAST Score
      920.8 bits
    • Similarity
      95.23%
    • Coverage
      99.66%
    • Alignment (schematic)

      SEQ ID NO 7
      99.66% cov
      XM_001086119
      5.84% cov
    • Alignment Length
      587 bp
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332259986
      XM_003279017
    • Hit length
      10,341 bp
    • E Value
      0E0
    • BLAST Score
      915.2 bits
    • Similarity
      95.05%
    • Coverage
      99.66%
    • Alignment (schematic)

      SEQ ID NO 7
      99.66% cov
      XM_003279017
      5.64% cov
    • Alignment Length
      586 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296196993
      XM_002746040
      1 of 2 hits reported for Callithrix jacchus.
    • Hit length
      9,285 bp
    • E Value
      0E0
    • BLAST Score
      832.1 bits
    • Similarity
      92.62%
    • Coverage
      99.14%
    • Alignment (schematic)

      SEQ ID NO 7
      99.14% cov
      XM_002746040
      6.24% cov
    • Alignment Length
      583 bp
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:194209358
      XM_001488793
    • Hit length
      9,303 bp
    • E Value
      0E0
    • BLAST Score
      651.1 bits
    • Similarity
      87.46%
    • Coverage
      97.77%
    • Alignment (schematic)

      SEQ ID NO 7
      97.77% cov
      XM_001488793
      6.14% cov
    • Alignment Length
      582 bp
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301762369
      XM_002916563
    • Hit length
      9,270 bp
    • E Value
      1.33E-165
    • BLAST Score
      592 bits
    • Similarity
      85.33%
    • Coverage
      99.49%
    • Alignment (schematic)

      SEQ ID NO 7
      99.49% cov
      XM_002916563
      6.27% cov
    • Alignment Length
      593 bp
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:73951764
      XM_536221
    • Hit length
      9,393 bp
    • E Value
      6.22E-159
    • BLAST Score
      569.9 bits
    • Similarity
      84.79%
    • Coverage
      98.46%
    • Alignment (schematic)

      SEQ ID NO 7
      98.46% cov
      XM_536221
      6.12% cov
    • Alignment Length
      585 bp
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:438804
      L23312
      1 of 2 hits reported for Mus musculus.
    • Hit length
      9,992 bp
    • E Value
      8.28E-138
    • BLAST Score
      499.7 bits
    • Similarity
      82.63%
    • Coverage
      99.49%
    • Alignment (schematic)

      SEQ ID NO 7
      99.49% cov
      L23312
      5.78% cov
    • Alignment Length
      593 bp
Occurrence
Tools
SEQ ID NO
8
Length
4,028
Sequence Type
DNA
Locations
Undetermined
Declared organism
Unspecified
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:398028
      L20431
      1 of 10 hits reported for Homo sapiens.
    • Hit length
      5,672 bp
    • E Value
      0E0
    • BLAST Score
      7,350.8 bits
    • Similarity
      99.9%
    • Coverage
      99.06%
    • Alignment (schematic)

      SEQ ID NO 8
      99.06% cov
      L20431
      70.42% cov
    • Alignment Length
      3,994 bp
    • CIGAR string
      861MI2998MI50MI62MI19M38H mismatches: 0 - insertions: 4 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332818988
      XM_517080
    • Hit length
      13,621 bp
    • E Value
      0E0
    • BLAST Score
      7,033.2 bits
    • Similarity
      98.45%
    • Coverage
      99.03%
    • Alignment (schematic)

      SEQ ID NO 8
      99.03% cov
      XM_517080
      29.37% cov
    • Alignment Length
      4,001 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297673011
      XM_002814525
    • Hit length
      13,169 bp
    • E Value
      0E0
    • BLAST Score
      6,416.4 bits
    • Similarity
      95.73%
    • Coverage
      99.03%
    • Alignment (schematic)

      SEQ ID NO 8
      99.03% cov
      XM_002814525
      30.26% cov
    • Alignment Length
      4,004 bp
Occurrence
Tools
SEQ ID NO
9
Length
688
Sequence Type
DNA
Locations
Undetermined
Declared organism
Unspecified
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:398028
      L20431
      1 of 12 hits reported for Homo sapiens.
    • Hit length
      5,672 bp
    • E Value
      0E0
    • BLAST Score
      1,242.1 bits
    • Similarity
      100%
    • Coverage
      97.67%
    • Alignment (schematic)

      SEQ ID NO 9
      97.67% cov
      L20431
      11.85% cov
    • Alignment Length
      672 bp
    • CIGAR string
      672M16H mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332818988
      XM_517080
    • Hit length
      13,621 bp
    • E Value
      0E0
    • BLAST Score
      1,214.4 bits
    • Similarity
      99.26%
    • Coverage
      97.67%
    • Alignment (schematic)

      SEQ ID NO 9
      97.67% cov
      XM_517080
      4.93% cov
    • Alignment Length
      672 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297673011
      XM_002814525
    • Hit length
      13,169 bp
    • E Value
      0E0
    • BLAST Score
      1,096.2 bits
    • Similarity
      96.14%
    • Coverage
      97.67%
    • Alignment (schematic)

      SEQ ID NO 9
      97.67% cov
      XM_002814525
      5.1% cov
    • Alignment Length
      674 bp
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332259986
      XM_003279017
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      10,341 bp
    • E Value
      0E0
    • BLAST Score
      1,070.3 bits
    • Similarity
      95.41%
    • Coverage
      97.67%
    • Alignment (schematic)

      SEQ ID NO 9
      97.67% cov
      XM_003279017
      6.51% cov
    • Alignment Length
      675 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297281951
      XM_001086119
      1 of 2 hits reported for Macaca mulatta.
    • Hit length
      9,986 bp
    • E Value
      0E0
    • BLAST Score
      1,070.3 bits
    • Similarity
      95.41%
    • Coverage
      97.67%
    • Alignment (schematic)

      SEQ ID NO 9
      97.67% cov
      XM_001086119
      6.74% cov
    • Alignment Length
      675 bp
Occurrence
2 times in PatSeqDB
Tools
SEQ ID NO
10
Length
64
Sequence Type
peptide
Locations
Undetermined
Declared organism
Not specified
Determined organism
Occurrence
Tools

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