WO 1994/021790 A1 - Process For Isolating Genes And The Gene Causative Of Huntington's Disease And Differential 3' Polyadenylation In The Gene - The Lens

Process For Isolating Genes And The Gene Causative Of Huntington's Disease And Differential 3' Polyadenylation In The Gene

Published: Sep 29, 1994
Earliest Priority: Mar 25 1993
Family: 3
Cited Works: 8
Cited by: 3
Cites: 1
Sequences: 12
Additional Info: Cited Works Full text Published Sequence

Data obtained from: EMBL-EBI Pat EPO Sequence Listings DDBJ Pat NCBI GenBank (EBI)

12 sequences found in this patent (in total)

Download sequences in fasta format: 3 peptides 9 DNAs

Displaying 1 - 10 of 12 sequences

SEQ ID NO

Length

Sequence Type

Locations

Declared organism

Determined organism

Occurrence

Tools

SEQ ID NO

Length

210

Sequence Type

DNA

Locations

Undetermined

Declared organism

Unspecified

Determined organism

Occurrence

Tools

SEQ ID NO

Length

Sequence Type

peptide

Locations

Undetermined

Declared organism

Not specified

Determined organism

Occurrence

Tools

SEQ ID NO

Length

Sequence Type

DNA

Locations

Undetermined

Declared organism

Unspecified

Determined organism

Occurrence

Tools

SEQ ID NO

Length

Sequence Type

peptide

Locations

Undetermined

Declared organism

Not specified

Determined organism

Occurrence

Tools

SEQ ID NO

Length

380

Sequence Type

DNA

Locations

Undetermined

Declared organism

Unspecified

Determined organism

Occurrence

2 times in PatSeqDB

in 2 simple families
in 2 documents

Tools

SEQ ID NO

Length

757

Sequence Type

DNA

Locations

Undetermined

Declared organism

Unspecified

Determined organism

Homo sapiens
Homo sapiens
Public DB hit
GI:90903230
NM_002111
1 of 4 hits reported for Homo sapiens.

Hit length
13,481 bp

E Value
0E0

BLAST Score
1,262.4 bits

Similarity

96.63%

Coverage

99.87%

Alignment (schematic)

SEQ ID NO 6

99.87% cov
NM_002111

5.69% cov

Alignment Length
771 bp

CIGAR string
1H38MN16MN152MI3MI16M4I4M2I22MI11MND106MIMN27MNI26MN55MI2MD23MI24MI4MD26MN115MI3MD71M mismatches: 7 - insertions: 15 - deletions: 4
synthetic construct
synthetic construct
Public DB hit
GI:225000683
BC172756

Hit length
9,496 bp

E Value
0E0

BLAST Score
1,262.4 bits

Similarity

96.63%

Coverage

99.87%

Alignment (schematic)

SEQ ID NO 6

99.87% cov
BC172756

8.08% cov

Alignment Length
771 bp

CIGAR string
1H38MN16MN152MI3MI16M4I4M2I22MI11MND106MIMN27MNI26MN55MI2MD23MI24MI4MD26MN115MI3MD71M mismatches: 7 - insertions: 15 - deletions: 4
Pan troglodytes
Pan troglodytes
Public DB hit
GI:332818988
XM_517080

Hit length
13,621 bp

E Value
0E0

BLAST Score
1,234.7 bits

Similarity

95.98%

Coverage

99.87%

Alignment (schematic)

SEQ ID NO 6

99.87% cov
XM_517080

5.63% cov

Alignment Length
771 bp
Nomascus leucogenys
Nomascus leucogenys
Public DB hit
GI:332259986
XM_003279017
1 of 2 hits reported for Nomascus leucogenys.

Hit length
10,341 bp

E Value
0E0

BLAST Score
1,190.4 bits

Similarity

94.95%

Coverage

99.87%

Alignment (schematic)

SEQ ID NO 6

99.87% cov
XM_003279017

7.42% cov

Alignment Length
772 bp
Pongo abelii
Pongo abelii
Public DB hit
GI:297673011
XM_002814525
1 of 2 hits reported for Pongo abelii.

Hit length
13,169 bp

E Value
0E0

BLAST Score
1,190.4 bits

Similarity

94.95%

Coverage

99.87%

Alignment (schematic)

SEQ ID NO 6

99.87% cov
XM_002814525

5.82% cov

Alignment Length
772 bp
Macaca mulatta
Macaca mulatta
Public DB hit
GI:297281951
XM_001086119

Hit length
9,986 bp

E Value
0E0

BLAST Score
1,138.7 bits

Similarity

93.88%

Coverage

99.21%

Alignment (schematic)

SEQ ID NO 6

99.21% cov
XM_001086119

7.64% cov

Alignment Length
768 bp
Callithrix jacchus
Callithrix jacchus
Public DB hit
GI:296196993
XM_002746040
1 of 2 hits reported for Callithrix jacchus.

Hit length
9,285 bp

E Value
0E0

BLAST Score
1,090.6 bits

Similarity

92.62%

Coverage

99.87%

Alignment (schematic)

SEQ ID NO 6

99.87% cov
XM_002746040

8.26% cov

Alignment Length
772 bp
Equus caballus
Equus caballus
Public DB hit
GI:194209358
XM_001488793

Hit length
9,303 bp

E Value
0E0

BLAST Score
813.6 bits

Similarity

86.18%

Coverage

99.87%

Alignment (schematic)

SEQ ID NO 6

99.87% cov
XM_001488793

8.24% cov

Alignment Length
774 bp
Canis lupus familiaris
Canis lupus familiaris
Public DB hit
GI:73951764
XM_536221

Hit length
9,393 bp

E Value
0E0

BLAST Score
736.1 bits

Similarity

87.03%

Coverage

86.39%

Alignment (schematic)

SEQ ID NO 6

86.39% cov
XM_536221

7.08% cov

Alignment Length
671 bp
Ailuropoda melanoleuca
Ailuropoda melanoleuca
Public DB hit
GI:301762369
XM_002916563

Hit length
9,270 bp

E Value
0E0

BLAST Score
728.7 bits

Similarity

86.66%

Coverage

87.45%

Alignment (schematic)

SEQ ID NO 6

87.45% cov
XM_002916563

7.26% cov

Alignment Length
682 bp
Oryctolagus cuniculus
Oryctolagus cuniculus
Public DB hit
GI:291412371
XM_002722410

Hit length
9,372 bp

E Value
0E0

BLAST Score
702.8 bits

Similarity

83.66%

Coverage

99.87%

Alignment (schematic)

SEQ ID NO 6

99.87% cov
XM_002722410

8.18% cov

Alignment Length
777 bp
Bos taurus
Bos taurus
Public DB hit
GI:297476105
XM_002688430

Hit length
10,025 bp

E Value
8.29E-149

BLAST Score
536.6 bits

Similarity

79.87%

Coverage

99.87%

Alignment (schematic)

SEQ ID NO 6

99.87% cov
XM_002688430

7.65% cov

Alignment Length
780 bp

Occurrence

Tools

SEQ ID NO

Length

584

Sequence Type

DNA

Locations

Undetermined

Declared organism

Unspecified

Determined organism

Homo sapiens
Homo sapiens
Public DB hit
GI:90903230
NM_002111
1 of 5 hits reported for Homo sapiens.

Hit length
13,481 bp

E Value
0E0

BLAST Score
992.8 bits

Similarity

97.44%

Coverage

99.66%

Alignment (schematic)

SEQ ID NO 7

99.66% cov
NM_002111

4.32% cov

Alignment Length
586 bp

CIGAR string
56MI11MN17MI132MI34MD3MD25MN15MD13MN110MN75MN2M2NMN74MI3M2H mismatches: 8 - insertions: 4 - deletions: 3
synthetic construct
synthetic construct
Public DB hit
GI:225000683
BC172756

Hit length
9,496 bp

E Value
0E0

BLAST Score
992.8 bits

Similarity

97.44%

Coverage

99.66%

Alignment (schematic)

SEQ ID NO 7

99.66% cov
BC172756

6.14% cov

Alignment Length
586 bp

CIGAR string
56MI11MN17MI132MI34MD3MD25MN15MD13MN110MN75MN2M2NMN74MI3M2H mismatches: 8 - insertions: 4 - deletions: 3
Pan troglodytes
Pan troglodytes
Public DB hit
GI:332818988
XM_517080

Hit length
13,621 bp

E Value
0E0

BLAST Score
959.5 bits

Similarity

96.42%

Coverage

99.66%

Alignment (schematic)

SEQ ID NO 7

99.66% cov
XM_517080

4.28% cov

Alignment Length
586 bp
Pongo abelii
Pongo abelii
Public DB hit
GI:297673011
XM_002814525

Hit length
13,169 bp

E Value
0E0

BLAST Score
926.3 bits

Similarity

95.39%

Coverage

99.66%

Alignment (schematic)

SEQ ID NO 7

99.66% cov
XM_002814525

4.43% cov

Alignment Length
586 bp
Macaca mulatta
Macaca mulatta
Public DB hit
GI:297281951
XM_001086119

Hit length
9,986 bp

E Value
0E0

BLAST Score
920.8 bits

Similarity

95.23%

Coverage

99.66%

Alignment (schematic)

SEQ ID NO 7

99.66% cov
XM_001086119

5.84% cov

Alignment Length
587 bp
Nomascus leucogenys
Nomascus leucogenys
Public DB hit
GI:332259986
XM_003279017

Hit length
10,341 bp

E Value
0E0

BLAST Score
915.2 bits

Similarity

95.05%

Coverage

99.66%

Alignment (schematic)

SEQ ID NO 7

99.66% cov
XM_003279017

5.64% cov

Alignment Length
586 bp
Callithrix jacchus
Callithrix jacchus
Public DB hit
GI:296196993
XM_002746040
1 of 2 hits reported for Callithrix jacchus.

Hit length
9,285 bp

E Value
0E0

BLAST Score
832.1 bits

Similarity

92.62%

Coverage

99.14%

Alignment (schematic)

SEQ ID NO 7

99.14% cov
XM_002746040

6.24% cov

Alignment Length
583 bp
Equus caballus
Equus caballus
Public DB hit
GI:194209358
XM_001488793

Hit length
9,303 bp

E Value
0E0

BLAST Score
651.1 bits

Similarity

87.46%

Coverage

97.77%

Alignment (schematic)

SEQ ID NO 7

97.77% cov
XM_001488793

6.14% cov

Alignment Length
582 bp
Ailuropoda melanoleuca
Ailuropoda melanoleuca
Public DB hit
GI:301762369
XM_002916563

Hit length
9,270 bp

E Value
1.33E-165

BLAST Score
592 bits

Similarity

85.33%

Coverage

99.49%

Alignment (schematic)

SEQ ID NO 7

99.49% cov
XM_002916563

6.27% cov

Alignment Length
593 bp
Canis lupus familiaris
Canis lupus familiaris
Public DB hit
GI:73951764
XM_536221

Hit length
9,393 bp

E Value
6.22E-159

BLAST Score
569.9 bits

Similarity

84.79%

Coverage

98.46%

Alignment (schematic)

SEQ ID NO 7

98.46% cov
XM_536221

6.12% cov

Alignment Length
585 bp
Mus musculus
Mus musculus
Public DB hit
GI:438804
L23312
1 of 2 hits reported for Mus musculus.

Hit length
9,992 bp

E Value
8.28E-138

BLAST Score
499.7 bits

Similarity

82.63%

Coverage

99.49%

Alignment (schematic)

SEQ ID NO 7

99.49% cov
L23312

5.78% cov

Alignment Length
593 bp

Occurrence

Tools

SEQ ID NO

Length

4,028

Sequence Type

DNA

Locations

Undetermined

Declared organism

Unspecified

Determined organism

Occurrence

Tools

SEQ ID NO

Length

688

Sequence Type

DNA

Locations

Undetermined

Declared organism

Unspecified

Determined organism

Occurrence

2 times in PatSeqDB

in 2 simple families
in 2 documents

Tools

SEQ ID NO

Length

Sequence Type

peptide

Locations

Undetermined

Declared organism

Not specified

Determined organism

Occurrence

Tools

12 sequences found in this patent (in total)

Filter sequences

Displaying 1 - 10 of 12 sequences

Homo sapiens

Public DB hit

Hit length

E Value

BLAST Score

Similarity

Coverage

Alignment (schematic)

Alignment Length

CIGAR string

Homo sapiens

Public DB hit

Hit length

E Value

BLAST Score

Similarity

Coverage

Alignment (schematic)

Alignment Length

CIGAR string

synthetic construct

Public DB hit

Hit length

E Value

BLAST Score

Similarity

Coverage

Alignment (schematic)

Alignment Length

CIGAR string

Pan troglodytes

Public DB hit

Hit length

E Value

BLAST Score

Similarity

Coverage

Alignment (schematic)

Alignment Length

Nomascus leucogenys

Public DB hit

Hit length

E Value

BLAST Score

Similarity

Coverage

Alignment (schematic)

Alignment Length

Pongo abelii

Public DB hit

Hit length

E Value

BLAST Score

Similarity

Coverage

Alignment (schematic)

Alignment Length

Macaca mulatta

Public DB hit

Hit length

E Value

BLAST Score

Similarity

Coverage

Alignment (schematic)

Alignment Length

Callithrix jacchus

Public DB hit

Hit length

E Value

BLAST Score

Similarity

Coverage

Alignment (schematic)

Alignment Length

Equus caballus

Public DB hit