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Search for Biological Sequences disclosed in Patents

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Data obtained from: DDBJ Pat NCBI GenBank (EBI) WIPO-PCT EMBL-EBI Pat EPO Sequence Listings
34 sequences found in this patent (in total)

Displaying 1 - 10 of 34 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
20
Type
DNA
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:163965414
      NG_007290
      1 of 12 hits reported for Homo sapiens.
    • Hit length
      53,972 bp
    • E Value
      3.49E-1
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      NG_007290
      0.04% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332858349
      XM_003316919
      1 of 7 hits reported for Pan troglodytes.
    • Hit length
      3,818 bp
    • E Value
      3.49E-1
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XM_003316919
      0.52% cov
    • Alignment Length
      20 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297706861
      XM_002830200
      1 of 3 hits reported for Pongo abelii.
    • Hit length
      3,709 bp
    • E Value
      3.49E-1
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XM_002830200
      0.54% cov
    • Alignment Length
      20 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297260030
      XM_001107440
      1 of 2 hits reported for Macaca mulatta.
    • Hit length
      3,941 bp
    • E Value
      3.49E-1
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XM_001107440
      0.51% cov
    • Alignment Length
      20 bp
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:240851537
      NM_001162404
    • Hit length
      2,559 bp
    • E Value
      3.49E-1
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      NM_001162404
      0.78% cov
    • Alignment Length
      20 bp
Occurrence
3 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
19
Type
DNA
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:163965414
      NG_007290
      1 of 4 hits reported for Homo sapiens.
    • Hit length
      53,972 bp
    • E Value
      1.38E0
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NG_007290
      0.04% cov
    • Alignment Length
      19 bp
    • CIGAR string
      19M mismatches: 0 - insertions: 0 - deletions: 0
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:392346843
      XM_003749601
      1 of 2 hits reported for Rattus norvegicus.
    • Hit length
      2,400 bp
    • E Value
      1.38E0
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XM_003749601
      0.79% cov
    • Alignment Length
      19 bp
    • CIGAR string
      19M mismatches: 0 - insertions: 0 - deletions: 0
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:359071892
      XM_003586841
      1 of 12 hits reported for Bos taurus.
    • Hit length
      2,088 bp
    • E Value
      1.38E0
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XM_003586841
      0.91% cov
    • Alignment Length
      19 bp
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:338719202
      XM_001916514
    • Hit length
      2,553 bp
    • E Value
      1.38E0
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XM_001916514
      0.74% cov
    • Alignment Length
      19 bp
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332858349
      XM_003316919
      1 of 5 hits reported for Pan troglodytes.
    • Hit length
      3,818 bp
    • E Value
      1.38E0
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XM_003316919
      0.5% cov
    • Alignment Length
      19 bp
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:240851537
      NM_001162404
    • Hit length
      2,559 bp
    • E Value
      1.38E0
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NM_001162404
      0.74% cov
    • Alignment Length
      19 bp
Occurrence
3 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
3
Length
18
Type
DNA
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:345780282
      XM_859585
    • Hit length
      985 bp
    • E Value
      5.45E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XM_859585
      1.83% cov
    • Alignment Length
      18 bp
    • CIGAR string
      18M mismatches: 0 - insertions: 0 - deletions: 0
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:338724119
      XM_001499485
      1 of 2 hits reported for Equus caballus.
    • Hit length
      956 bp
    • E Value
      5.45E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XM_001499485
      1.88% cov
    • Alignment Length
      18 bp
    • CIGAR string
      18M mismatches: 0 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297680779
      XM_002818100
    • Hit length
      2,021 bp
    • E Value
      5.45E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XM_002818100
      0.89% cov
    • Alignment Length
      18 bp
    • CIGAR string
      18M mismatches: 0 - insertions: 0 - deletions: 0
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:297458386
      XM_867772
    • Hit length
      796 bp
    • E Value
      5.45E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XM_867772
      2.26% cov
    • Alignment Length
      18 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296209378
      XM_002751451
      1 of 2 hits reported for Callithrix jacchus.
    • Hit length
      954 bp
    • E Value
      5.45E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XM_002751451
      1.89% cov
    • Alignment Length
      18 bp
  • Oryctolagus cuniculus

    Oryctolagus cuniculus

    • Public DB hit
      GI:284005070
      NM_001171402
    • Hit length
      708 bp
    • E Value
      5.45E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NM_001171402
      2.54% cov
    • Alignment Length
      18 bp
  • Papio anubis

    Papio anubis

    • Public DB hit
      GI:281182593
      NM_001168898
    • Hit length
      693 bp
    • E Value
      5.45E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NM_001168898
      2.6% cov
    • Alignment Length
      18 bp
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:207452733
      NM_001135595
    • Hit length
      881 bp
    • E Value
      5.45E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NM_001135595
      2.04% cov
    • Alignment Length
      18 bp
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:84105267
      NM_006896
    • Hit length
      2,018 bp
    • E Value
      5.45E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NM_006896
      0.89% cov
    • Alignment Length
      18 bp
  • Cricetulus griseus

    Cricetulus griseus

    • Public DB hit
      GI:351513535
      NW_003618014
    • Hit length
      47,727 bp
    • E Value
      5.45E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NW_003618014
      0.04% cov
    • Alignment Length
      18 bp
  • Vicugna pacos

    Vicugna pacos

    • Public DB hit
      GI:241177161
      NT_167305
    • Hit length
      620,557 bp
    • E Value
      5.45E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NT_167305
      0% cov
    • Alignment Length
      18 bp
  • Tupaia belangeri

    Tupaia belangeri

    • Public DB hit
      GI:223047823
      NT_167179
    • Hit length
      608,778 bp
    • E Value
      5.45E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NT_167179
      0% cov
    • Alignment Length
      18 bp
  • Colobus guereza

    Colobus guereza

    • Public DB hit
      GI:169259726
      NT_166703
    • Hit length
      587,413 bp
    • E Value
      5.45E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NT_166703
      0% cov
    • Alignment Length
      18 bp
  • Chlorocebus aethiops

    Chlorocebus aethiops

    • Public DB hit
      GI:163885969
      NT_166933
    • Hit length
      556,298 bp
    • E Value
      5.45E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NT_166933
      0% cov
    • Alignment Length
      18 bp
  • Saimiri boliviensis boliviensis

    Saimiri boliviensis boliviensis

    • Public DB hit
      GI:160624907
      NT_166875
    • Hit length
      601,227 bp
    • E Value
      5.45E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NT_166875
      0% cov
    • Alignment Length
      18 bp
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:157346320
      NT_166776
    • Hit length
      620,983 bp
    • E Value
      5.45E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NT_166776
      0% cov
    • Alignment Length
      18 bp
  • Myotis lucifugus

    Myotis lucifugus

    • Public DB hit
      GI:124389590
      NT_166239
    • Hit length
      392,700 bp
    • E Value
      5.45E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NT_166239
      0% cov
    • Alignment Length
      18 bp
  • Cavia porcellus

    Cavia porcellus

    • Public DB hit
      GI:124000720
      NT_166215
    • Hit length
      499,117 bp
    • E Value
      5.45E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NT_166215
      0% cov
    • Alignment Length
      18 bp
  • Callicebus moloch

    Callicebus moloch

    • Public DB hit
      GI:119812960
      NT_165896
    • Hit length
      697,684 bp
    • E Value
      5.45E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NT_165896
      0% cov
    • Alignment Length
      18 bp
  • Aotus nancymaae

    Aotus nancymaae

    • Public DB hit
      GI:118420279
      NT_166054
    • Hit length
      490,530 bp
    • E Value
      5.45E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NT_166054
      0% cov
    • Alignment Length
      18 bp
  • Felis catus

    Felis catus

    • Public DB hit
      GI:115398429
      NT_165848
    • Hit length
      481,560 bp
    • E Value
      5.45E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NT_165848
      0% cov
    • Alignment Length
      18 bp
  • Sorex araneus

    Sorex araneus

    • Public DB hit
      GI:115333975
      NT_165805
    • Hit length
      529,833 bp
    • E Value
      5.45E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NT_165805
      0% cov
    • Alignment Length
      18 bp
  • Microcebus murinus

    Microcebus murinus

    • Public DB hit
      GI:110430922
      NT_165887
    • Hit length
      766,007 bp
    • E Value
      5.45E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NT_165887
      0% cov
    • Alignment Length
      18 bp
Occurrence
Tools
PatSeq Finder
SEQ ID NO
4
Length
20
Type
DNA
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:392346415
      XM_213633
      1 of 3 hits reported for Rattus norvegicus.
    • Hit length
      2,527 bp
    • E Value
      3.49E-1
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XM_213633
      0.79% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:390466610
      XM_002751453
    • Hit length
      892 bp
    • E Value
      3.49E-1
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XM_002751453
      2.24% cov
    • Alignment Length
      20 bp
  • Drosophila melanogaster

    Drosophila melanogaster

    • Public DB hit
      GI:386765235
      NM_206443
      1 of 2 hits reported for Drosophila melanogaster.
    • Hit length
      3,987 bp
    • E Value
      3.49E-1
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NM_206443
      0.5% cov
    • Alignment Length
      20 bp
  • Gallus gallus

    Gallus gallus

    • Public DB hit
      GI:363735859
      XM_428765
      1 of 2 hits reported for Gallus gallus.
    • Hit length
      2,076 bp
    • E Value
      3.49E-1
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XM_428765
      0.96% cov
    • Alignment Length
      20 bp
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:359320402
      XM_846028
      1 of 6 hits reported for Canis lupus familiaris.
    • Hit length
      1,308 bp
    • E Value
      3.49E-1
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XM_846028
      1.53% cov
    • Alignment Length
      20 bp
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:359076816
      XM_003587421
      1 of 4 hits reported for Bos taurus.
    • Hit length
      467 bp
    • E Value
      3.49E-1
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XM_003587421
      4.28% cov
    • Alignment Length
      20 bp
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:350595415
      XM_003134839
    • Hit length
      911 bp
    • E Value
      3.49E-1
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XM_003134839
      2.2% cov
    • Alignment Length
      20 bp
  • Cavia porcellus

    Cavia porcellus

    • Public DB hit
      GI:348564431
      XM_003467961
      1 of 5 hits reported for Cavia porcellus.
    • Hit length
      702 bp
    • E Value
      3.49E-1
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XM_003467961
      2.85% cov
    • Alignment Length
      20 bp
  • Loxodonta africana

    Loxodonta africana

    • Public DB hit
      GI:344285932
      XM_003414666
    • Hit length
      1,284 bp
    • E Value
      3.49E-1
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XM_003414666
      1.56% cov
    • Alignment Length
      20 bp
Occurrence
3 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
5
Length
19
Type
DNA
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:336020341
      NG_029112
      1 of 17 hits reported for Homo sapiens.
    • Hit length
      24,375 bp
    • E Value
      1.38E0
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NG_029112
      0.08% cov
    • Alignment Length
      19 bp
    • CIGAR string
      19M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332811860
      XM_514178
      1 of 5 hits reported for Pan troglodytes.
    • Hit length
      2,355 bp
    • E Value
      1.38E0
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XM_514178
      0.81% cov
    • Alignment Length
      19 bp
    • CIGAR string
      19M mismatches: 0 - insertions: 0 - deletions: 0
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:261858423
      AB527570
      1 of 3 hits reported for synthetic construct.
    • Hit length
      1,352 bp
    • E Value
      1.38E0
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      AB527570
      1.41% cov
    • Alignment Length
      19 bp
Occurrence
3 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
6
Length
23
Type
DNA
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:336020341
      NG_029112
      1 of 4 hits reported for Homo sapiens.
    • Hit length
      24,375 bp
    • E Value
      8.49E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NG_029112
      0.09% cov
    • Alignment Length
      23 bp
    • CIGAR string
      23M mismatches: 0 - insertions: 0 - deletions: 0
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:393794763
      NM_053691
      1 of 3 hits reported for Rattus norvegicus.
    • Hit length
      3,122 bp
    • E Value
      8.49E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NM_053691
      0.74% cov
    • Alignment Length
      23 bp
    • CIGAR string
      23M mismatches: 0 - insertions: 0 - deletions: 0
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:384475840
      NM_001258137
    • Hit length
      1,944 bp
    • E Value
      8.49E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NM_001258137
      1.18% cov
    • Alignment Length
      23 bp
  • Cavia porcellus

    Cavia porcellus

    • Public DB hit
      GI:348576996
      XM_003474223
    • Hit length
      1,329 bp
    • E Value
      8.49E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_003474223
      1.73% cov
    • Alignment Length
      23 bp
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:345803101
      XM_537144
    • Hit length
      2,030 bp
    • E Value
      8.49E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_537144
      1.13% cov
    • Alignment Length
      23 bp
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:338724752
      XM_001489608
    • Hit length
      1,338 bp
    • E Value
      8.49E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_001489608
      1.72% cov
    • Alignment Length
      23 bp
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332811860
      XM_514178
    • Hit length
      2,355 bp
    • E Value
      8.49E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_514178
      0.98% cov
    • Alignment Length
      23 bp
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332247875
      XM_003273039
    • Hit length
      2,152 bp
    • E Value
      8.49E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_003273039
      1.07% cov
    • Alignment Length
      23 bp
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:311265050
      XM_003130413
      1 of 2 hits reported for Sus scrofa.
    • Hit length
      2,073 bp
    • E Value
      8.49E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_003130413
      1.11% cov
    • Alignment Length
      23 bp
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301763610
      XM_002917177
    • Hit length
      1,903 bp
    • E Value
      8.49E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_002917177
      1.21% cov
    • Alignment Length
      23 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297662055
      XM_002809492
      1 of 4 hits reported for Pongo abelii.
    • Hit length
      1,999 bp
    • E Value
      8.49E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_002809492
      1.15% cov
    • Alignment Length
      23 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296230185
      XM_002760550
    • Hit length
      1,417 bp
    • E Value
      8.49E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_002760550
      1.62% cov
    • Alignment Length
      23 bp
  • Oryctolagus cuniculus

    Oryctolagus cuniculus

    • Public DB hit
      GI:291402442
      XM_002717530
    • Hit length
      1,356 bp
    • E Value
      8.49E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_002717530
      1.7% cov
    • Alignment Length
      23 bp
  • Monodelphis domestica

    Monodelphis domestica

    • Public DB hit
      GI:126306794
      XM_001366551
    • Hit length
      1,338 bp
    • E Value
      8.49E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_001366551
      1.72% cov
    • Alignment Length
      23 bp
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:114053210
      NM_001046270
      1 of 2 hits reported for Bos taurus.
    • Hit length
      1,457 bp
    • E Value
      8.49E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NM_001046270
      1.58% cov
    • Alignment Length
      23 bp
Occurrence
3 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
7
Length
21
Type
DNA
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332812733
      XM_515346
      1 of 8 hits reported for Pan troglodytes.
    • Hit length
      813 bp
    • E Value
      8.84E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XM_515346
      2.58% cov
    • Alignment Length
      21 bp
    • CIGAR string
      21M mismatches: 0 - insertions: 0 - deletions: 0
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:109637780
      NM_001809
      1 of 13 hits reported for Homo sapiens.
    • Hit length
      1,431 bp
    • E Value
      8.84E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NM_001809
      1.47% cov
    • Alignment Length
      21 bp
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:355477184
      NC_007307
      1 of 4 hits reported for Bos taurus.
    • Hit length
      108,503,706 bp
    • E Value
      3.49E-1
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      95.24%
    • Alignment (schematic)

      SEQ ID NO 7
      95.24% cov
      NC_007307
      0% cov
    • Alignment Length
      20 bp
Occurrence
Tools
PatSeq Finder
SEQ ID NO
8
Length
19
Type
DNA
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332812733
      XM_515346
      1 of 8 hits reported for Pan troglodytes.
    • Hit length
      813 bp
    • E Value
      1.38E0
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XM_515346
      2.34% cov
    • Alignment Length
      19 bp
    • CIGAR string
      19M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332242990
      XM_003270618
      1 of 7 hits reported for Nomascus leucogenys.
    • Hit length
      818 bp
    • E Value
      1.38E0
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XM_003270618
      2.32% cov
    • Alignment Length
      19 bp
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:109637780
      NM_001809
      1 of 10 hits reported for Homo sapiens.
    • Hit length
      1,431 bp
    • E Value
      1.38E0
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NM_001809
      1.33% cov
    • Alignment Length
      19 bp
Occurrence
Tools
PatSeq Finder
SEQ ID NO
9
Length
20
Type
DNA
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:237858793
      NG_012133
      1 of 13 hits reported for Homo sapiens.
    • Hit length
      29,907 bp
    • E Value
      3.49E-1
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      NG_012133
      0.07% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332207850
      XM_003252962
      1 of 5 hits reported for Nomascus leucogenys.
    • Hit length
      2,549 bp
    • E Value
      3.49E-1
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XM_003252962
      0.78% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297707388
      XM_002830442
      1 of 5 hits reported for Pongo abelii.
    • Hit length
      2,347 bp
    • E Value
      3.49E-1
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XM_002830442
      0.85% cov
    • Alignment Length
      20 bp
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:291061356
      NC_006487
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      61,729,293 bp
    • E Value
      3.49E-1
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      NC_006487
      0% cov
    • Alignment Length
      20 bp
Occurrence
Tools
PatSeq Finder
SEQ ID NO
10
Length
19
Type
DNA
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:237858793
      NG_012133
      1 of 16 hits reported for Homo sapiens.
    • Hit length
      29,907 bp
    • E Value
      1.38E0
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      NG_012133
      0.06% cov
    • Alignment Length
      19 bp
    • CIGAR string
      19M mismatches: 0 - insertions: 0 - deletions: 0
  • Drosophila pseudoobscura pseudoobscura

    Drosophila pseudoobscura pseudoobscura

    • Public DB hit
      GI:390177129
      XM_001357864
      1 of 3 hits reported for Drosophila pseudoobscura pseudoobscura.
    • Hit length
      2,777 bp
    • E Value
      5.45E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      94.74%
    • Alignment (schematic)

      SEQ ID NO 10
      94.74% cov
      XM_001357864
      0.65% cov
    • Alignment Length
      18 bp
  • Drosophila persimilis

    Drosophila persimilis

    • Public DB hit
      GI:195158320
      XM_002020004
      1 of 3 hits reported for Drosophila persimilis.
    • Hit length
      2,502 bp
    • E Value
      5.45E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      94.74%
    • Alignment (schematic)

      SEQ ID NO 10
      94.74% cov
      XM_002020004
      0.72% cov
    • Alignment Length
      18 bp
Occurrence
Tools
PatSeq Finder

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