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Search for Biological Sequences disclosed in Patents

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Data obtained from: DDBJ Pat NCBI GenBank USPTO Fulltext EMBL-EBI Pat
8 sequences found in this patent (in total)

Displaying 8 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
2,063
Type
nucleotide
Locations
Detailed Description, Summary

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:2149155
      U82535
      1 of 8 hits reported for Homo sapiens.
    • Hit length
      2,063 bp
    • E Value
      0E0
    • BLAST Score
      3,810.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      U82535
      100% cov
    • Alignment Length
      2,063 bp
    • CIGAR string
      2063M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332808871
      XM_001161208
    • Hit length
      2,542 bp
    • E Value
      0E0
    • BLAST Score
      3,694.4 bits
    • Similarity
      99.36%
    • Coverage
      98.84%
    • Alignment (schematic)

      SEQ ID NO 1
      98.84% cov
      XM_001161208
      80.21% cov
    • Alignment Length
      2,039 bp
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332219858
      XM_003259027
    • Hit length
      2,539 bp
    • E Value
      0E0
    • BLAST Score
      3,543 bits
    • Similarity
      98.04%
    • Coverage
      98.84%
    • Alignment (schematic)

      SEQ ID NO 1
      98.84% cov
      XM_003259027
      80.27% cov
    • Alignment Length
      2,040 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297665062
      XM_002810891
    • Hit length
      2,331 bp
    • E Value
      0E0
    • BLAST Score
      2,968.7 bits
    • Similarity
      98.52%
    • Coverage
      81.58%
    • Alignment (schematic)

      SEQ ID NO 1
      81.58% cov
      XM_002810891
      72.16% cov
    • Alignment Length
      1,684 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296207857
      XM_002750780
    • Hit length
      1,740 bp
    • E Value
      0E0
    • BLAST Score
      2,693.5 bits
    • Similarity
      94.6%
    • Coverage
      84.34%
    • Alignment (schematic)

      SEQ ID NO 1
      84.34% cov
      XM_002750780
      100% cov
    • Alignment Length
      1,742 bp
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:73977879
      XM_539627
    • Hit length
      2,277 bp
    • E Value
      0E0
    • BLAST Score
      2,257.7 bits
    • Similarity
      87.18%
    • Coverage
      97.38%
    • Alignment (schematic)

      SEQ ID NO 1
      97.38% cov
      XM_539627
      88.45% cov
    • Alignment Length
      2,052 bp
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:194207500
      XM_001916136
    • Hit length
      1,740 bp
    • E Value
      0E0
    • BLAST Score
      2,239.3 bits
    • Similarity
      89.95%
    • Coverage
      84.34%
    • Alignment (schematic)

      SEQ ID NO 1
      84.34% cov
      XM_001916136
      100% cov
    • Alignment Length
      1,751 bp
  • Oryctolagus cuniculus

    Oryctolagus cuniculus

    • Public DB hit
      GI:291398975
      XM_002715123
    • Hit length
      1,737 bp
    • E Value
      0E0
    • BLAST Score
      2,206 bits
    • Similarity
      89.75%
    • Coverage
      83.76%
    • Alignment (schematic)

      SEQ ID NO 1
      83.76% cov
      XM_002715123
      99.48% cov
    • Alignment Length
      1,737 bp
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301768193
      XM_002919475
    • Hit length
      1,740 bp
    • E Value
      0E0
    • BLAST Score
      2,189.4 bits
    • Similarity
      89.46%
    • Coverage
      84.34%
    • Alignment (schematic)

      SEQ ID NO 1
      84.34% cov
      XM_002919475
      100% cov
    • Alignment Length
      1,755 bp
Occurrence
54 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
579
Type
peptide
Locations
Detailed Description, Summary

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:2149156
      AAB58505
      1 of 4 hits reported for Homo sapiens.
    • Hit length
      579 aa
    • E Value
      0E0
    • BLAST Score
      1,186.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      AAB58505
      100% cov
    • Alignment Length
      579 aa
    • CIGAR string
      579M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:114556348
      XP_001161208
    • Hit length
      579 aa
    • E Value
      0E0
    • BLAST Score
      1,180.2 bits
    • Similarity
      99.83%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_001161208
      100% cov
    • Alignment Length
      579 aa
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332219859
      XP_003259075
    • Hit length
      579 aa
    • E Value
      0E0
    • BLAST Score
      1,171.4 bits
    • Similarity
      99.48%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_003259075
      100% cov
    • Alignment Length
      579 aa
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296207858
      XP_002750826
    • Hit length
      579 aa
    • E Value
      0E0
    • BLAST Score
      1,016.9 bits
    • Similarity
      96.55%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_002750826
      100% cov
    • Alignment Length
      579 aa
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:194207501
      XP_001916171
    • Hit length
      579 aa
    • E Value
      0E0
    • BLAST Score
      968.4 bits
    • Similarity
      96.01%
    • Coverage
      99.65%
    • Alignment (schematic)

      SEQ ID NO 2
      99.65% cov
      XP_001916171
      99.65% cov
    • Alignment Length
      577 aa
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:296488922
      DAA31035
      1 of 2 hits reported for Bos taurus.
    • Hit length
      579 aa
    • E Value
      0E0
    • BLAST Score
      959.9 bits
    • Similarity
      92.92%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      DAA31035
      100% cov
    • Alignment Length
      579 aa
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297278620
      XP_002808262
    • Hit length
      582 aa
    • E Value
      0E0
    • BLAST Score
      956.8 bits
    • Similarity
      94.19%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_002808262
      100% cov
    • Alignment Length
      585 aa
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:26348094
      BAC37695
      1 of 3 hits reported for Mus musculus.
    • Hit length
      579 aa
    • E Value
      0E0
    • BLAST Score
      956.4 bits
    • Similarity
      92.4%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      BAC37695
      100% cov
    • Alignment Length
      579 aa
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301768194
      XP_002919521
    • Hit length
      579 aa
    • E Value
      0E0
    • BLAST Score
      955.7 bits
    • Similarity
      95.85%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_002919521
      100% cov
    • Alignment Length
      579 aa
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297665063
      XP_002810937
    • Hit length
      535 aa
    • E Value
      0E0
    • BLAST Score
      950.7 bits
    • Similarity
      90.67%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_002810937
      100% cov
    • Alignment Length
      579 aa
Occurrence
56 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
3
Length
3,805
Type
nucleotide
Locations
Detailed Description, Summary

Declared organism:
Mus musculus

Determined organism:
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:26348093
      AK079598
      1 of 5 hits reported for Mus musculus.
    • Hit length
      3,805 bp
    • E Value
      0E0
    • BLAST Score
      7,027.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      AK079598
      100% cov
    • Alignment Length
      3,805 bp
    • CIGAR string
      3805M mismatches: 0 - insertions: 0 - deletions: 0
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:77695931
      NM_024132
      1 of 3 hits reported for Rattus norvegicus.
    • Hit length
      3,526 bp
    • E Value
      0E0
    • BLAST Score
      3,755.4 bits
    • Similarity
      87.68%
    • Coverage
      86.39%
    • Alignment (schematic)

      SEQ ID NO 3
      86.39% cov
      NM_024132
      91.52% cov
    • Alignment Length
      3,313 bp
Occurrence
14 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
4
Length
579
Type
peptide
Locations
Detailed Description, Summary

Declared organism:
Mus musculus

Determined organism:
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:26348094
      BAC37695
      1 of 4 hits reported for Mus musculus.
    • Hit length
      579 aa
    • E Value
      0E0
    • BLAST Score
      1,186.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      BAC37695
      100% cov
    • Alignment Length
      579 aa
    • CIGAR string
      579M mismatches: 0 - insertions: 0 - deletions: 0
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:13162304
      NP_077046
      1 of 6 hits reported for Rattus norvegicus.
    • Hit length
      579 aa
    • E Value
      0E0
    • BLAST Score
      988.4 bits
    • Similarity
      95.51%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NP_077046
      100% cov
    • Alignment Length
      579 aa
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296207858
      XP_002750826
    • Hit length
      579 aa
    • E Value
      0E0
    • BLAST Score
      945.3 bits
    • Similarity
      92.06%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_002750826
      100% cov
    • Alignment Length
      579 aa
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332219859
      XP_003259075
    • Hit length
      579 aa
    • E Value
      0E0
    • BLAST Score
      934.1 bits
    • Similarity
      92.23%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_003259075
      100% cov
    • Alignment Length
      579 aa
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:2149156
      AAB58505
      1 of 3 hits reported for Homo sapiens.
    • Hit length
      579 aa
    • E Value
      0E0
    • BLAST Score
      920.2 bits
    • Similarity
      92.4%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      AAB58505
      100% cov
    • Alignment Length
      579 aa
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301768194
      XP_002919521
    • Hit length
      579 aa
    • E Value
      0E0
    • BLAST Score
      919.1 bits
    • Similarity
      91.88%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_002919521
      100% cov
    • Alignment Length
      579 aa
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:114556348
      XP_001161208
    • Hit length
      579 aa
    • E Value
      0E0
    • BLAST Score
      918.3 bits
    • Similarity
      92.57%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_001161208
      100% cov
    • Alignment Length
      579 aa
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:194207501
      XP_001916171
    • Hit length
      579 aa
    • E Value
      0E0
    • BLAST Score
      911.4 bits
    • Similarity
      91.88%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_001916171
      100% cov
    • Alignment Length
      579 aa
Occurrence
18 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
5
Length
2,472
Type
nucleotide
Locations
Detailed Description, Summary

Declared organism:
Rattus norvegicus

Determined organism:
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:1680721
      U72497
      1 of 3 hits reported for Rattus norvegicus.
    • Hit length
      2,472 bp
    • E Value
      0E0
    • BLAST Score
      4,566 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      U72497
      100% cov
    • Alignment Length
      2,472 bp
    • CIGAR string
      2472M mismatches: 0 - insertions: 0 - deletions: 0
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:30354072
      BC052321
      1 of 7 hits reported for Mus musculus.
    • Hit length
      2,788 bp
    • E Value
      0E0
    • BLAST Score
      3,110.9 bits
    • Similarity
      89.38%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      BC052321
      89.63% cov
    • Alignment Length
      2,513 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296207857
      XM_002750780
      1 of 2 hits reported for Callithrix jacchus.
    • Hit length
      1,740 bp
    • E Value
      0E0
    • BLAST Score
      1,757.3 bits
    • Similarity
      85.1%
    • Coverage
      70.39%
    • Alignment (schematic)

      SEQ ID NO 5
      70.39% cov
      XM_002750780
      100% cov
    • Alignment Length
      1,765 bp
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:194207500
      XM_001916136
      1 of 2 hits reported for Equus caballus.
    • Hit length
      1,740 bp
    • E Value
      0E0
    • BLAST Score
      1,757.3 bits
    • Similarity
      85.13%
    • Coverage
      70.15%
    • Alignment (schematic)

      SEQ ID NO 5
      70.15% cov
      XM_001916136
      99.66% cov
    • Alignment Length
      1,755 bp
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332219858
      XM_003259027
    • Hit length
      2,539 bp
    • E Value
      0E0
    • BLAST Score
      1,749.9 bits
    • Similarity
      84.89%
    • Coverage
      71%
    • Alignment (schematic)

      SEQ ID NO 5
      71% cov
      XM_003259027
      69.08% cov
    • Alignment Length
      1,780 bp
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332808871
      XM_001161208
    • Hit length
      2,542 bp
    • E Value
      0E0
    • BLAST Score
      1,731.4 bits
    • Similarity
      84.72%
    • Coverage
      70.95%
    • Alignment (schematic)

      SEQ ID NO 5
      70.95% cov
      XM_001161208
      68.96% cov
    • Alignment Length
      1,780 bp
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:50493715
      CR612908
      1 of 2 hits reported for Homo sapiens.
    • Hit length
      1,989 bp
    • E Value
      0E0
    • BLAST Score
      1,731.4 bits
    • Similarity
      84.72%
    • Coverage
      70.95%
    • Alignment (schematic)

      SEQ ID NO 5
      70.95% cov
      CR612908
      88.13% cov
    • Alignment Length
      1,780 bp
Occurrence
58 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
6
Length
579
Type
peptide
Locations
Detailed Description, Summary

Declared organism:
Rattus norvegicus

Determined organism:
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:13162304
      NP_077046
      1 of 6 hits reported for Rattus norvegicus.
    • Hit length
      579 aa
    • E Value
      0E0
    • BLAST Score
      1,183.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NP_077046
      100% cov
    • Alignment Length
      579 aa
    • CIGAR string
      579M mismatches: 0 - insertions: 0 - deletions: 0
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:226443015
      NP_034303
      1 of 4 hits reported for Mus musculus.
    • Hit length
      579 aa
    • E Value
      0E0
    • BLAST Score
      1,030.8 bits
    • Similarity
      95.68%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NP_034303
      100% cov
    • Alignment Length
      579 aa
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296207858
      XP_002750826
    • Hit length
      579 aa
    • E Value
      0E0
    • BLAST Score
      937.2 bits
    • Similarity
      91.36%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XP_002750826
      100% cov
    • Alignment Length
      579 aa
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:296488922
      DAA31035
      1 of 2 hits reported for Bos taurus.
    • Hit length
      579 aa
    • E Value
      0E0
    • BLAST Score
      926.8 bits
    • Similarity
      90.16%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      DAA31035
      100% cov
    • Alignment Length
      579 aa
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332219859
      XP_003259075
    • Hit length
      579 aa
    • E Value
      0E0
    • BLAST Score
      921.8 bits
    • Similarity
      91.19%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XP_003259075
      100% cov
    • Alignment Length
      579 aa
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:2149156
      AAB58505
      1 of 3 hits reported for Homo sapiens.
    • Hit length
      579 aa
    • E Value
      0E0
    • BLAST Score
      908.3 bits
    • Similarity
      91.36%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      AAB58505
      100% cov
    • Alignment Length
      579 aa
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:114556348
      XP_001161208
    • Hit length
      579 aa
    • E Value
      0E0
    • BLAST Score
      904.8 bits
    • Similarity
      91.54%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XP_001161208
      100% cov
    • Alignment Length
      579 aa
Occurrence
42 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
7
Length
2,300
Type
nucleotide
Locations
Detailed Description, Summary

Declared organism:
Sus scrofa

Determined organism:
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:47522659
      NM_213914
    • Hit length
      2,300 bp
    • E Value
      0E0
    • BLAST Score
      4,248.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NM_213914
      100% cov
    • Alignment Length
      2,300 bp
    • CIGAR string
      2300M mismatches: 0 - insertions: 0 - deletions: 0
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:194207500
      XM_001916136
    • Hit length
      1,740 bp
    • E Value
      0E0
    • BLAST Score
      2,174.6 bits
    • Similarity
      89.5%
    • Coverage
      74.91%
    • Alignment (schematic)

      SEQ ID NO 7
      74.91% cov
      XM_001916136
      99.02% cov
    • Alignment Length
      1,733 bp
    • CIGAR string
      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 mismatches: 162 - insertions: 10 - deletions: 10
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:73977879
      XM_539627
    • Hit length
      2,277 bp
    • E Value
      0E0
    • BLAST Score
      2,098.9 bits
    • Similarity
      85.25%
    • Coverage
      89.39%
    • Alignment (schematic)

      SEQ ID NO 7
      89.39% cov
      XM_539627
      90.95% cov
    • Alignment Length
      2,095 bp
    • CIGAR string
      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 mismatches: 246 - insertions: 39 - deletions: 24
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:149642688
      NM_001099102
    • Hit length
      2,290 bp
    • E Value
      0E0
    • BLAST Score
      2,084.1 bits
    • Similarity
      85.72%
    • Coverage
      86.48%
    • Alignment (schematic)

      SEQ ID NO 7
      86.48% cov
      NM_001099102
      87.16% cov
    • Alignment Length
      2,017 bp
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332808871
      XM_001161208
    • Hit length
      2,542 bp
    • E Value
      0E0
    • BLAST Score
      2,041.7 bits
    • Similarity
      84.83%
    • Coverage
      89.61%
    • Alignment (schematic)

      SEQ ID NO 7
      89.61% cov
      XM_001161208
      81.39% cov
    • Alignment Length
      2,109 bp
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:166795286
      NM_001441
      1 of 7 hits reported for Homo sapiens.
    • Hit length
      2,105 bp
    • E Value
      0E0
    • BLAST Score
      2,032.4 bits
    • Similarity
      85.25%
    • Coverage
      86.96%
    • Alignment (schematic)

      SEQ ID NO 7
      86.96% cov
      NM_001441
      95.63% cov
    • Alignment Length
      2,047 bp
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332219858
      XM_003259027
    • Hit length
      2,539 bp
    • E Value
      0E0
    • BLAST Score
      2,025 bits
    • Similarity
      84.66%
    • Coverage
      89.78%
    • Alignment (schematic)

      SEQ ID NO 7
      89.78% cov
      XM_003259027
      81.57% cov
    • Alignment Length
      2,112 bp
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301768193
      XM_002919475
    • Hit length
      1,740 bp
    • E Value
      0E0
    • BLAST Score
      2,001 bits
    • Similarity
      87.79%
    • Coverage
      74.61%
    • Alignment (schematic)

      SEQ ID NO 7
      74.61% cov
      XM_002919475
      98.62% cov
    • Alignment Length
      1,728 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296207857
      XM_002750780
    • Hit length
      1,740 bp
    • E Value
      0E0
    • BLAST Score
      1,929 bits
    • Similarity
      87.08%
    • Coverage
      74.61%
    • Alignment (schematic)

      SEQ ID NO 7
      74.61% cov
      XM_002750780
      98.62% cov
    • Alignment Length
      1,734 bp
  • Oryctolagus cuniculus

    Oryctolagus cuniculus

    • Public DB hit
      GI:291398975
      XM_002715123
    • Hit length
      1,737 bp
    • E Value
      0E0
    • BLAST Score
      1,910.6 bits
    • Similarity
      86.92%
    • Coverage
      74.43%
    • Alignment (schematic)

      SEQ ID NO 7
      74.43% cov
      XM_002715123
      98.56% cov
    • Alignment Length
      1,728 bp
Occurrence
17 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
8
Length
579
Type
peptide
Locations
Detailed Description, Summary

Declared organism:
Sus scrofa

Determined organism:
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:47522660
      NP_999079
    • Hit length
      579 aa
    • E Value
      0E0
    • BLAST Score
      1,184.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NP_999079
      100% cov
    • Alignment Length
      579 aa
    • CIGAR string
      579M mismatches: 0 - insertions: 0 - deletions: 0
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:296488922
      DAA31035
      1 of 2 hits reported for Bos taurus.
    • Hit length
      579 aa
    • E Value
      0E0
    • BLAST Score
      943.3 bits
    • Similarity
      91.36%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      DAA31035
      100% cov
    • Alignment Length
      579 aa
    • CIGAR string
      2M2NMN3MN2MN2MN5MN13MN2M2NMN3MN2MN3MN19MN12M2N2MNMN6MNM2N6MN13MN3M2NMN16MN2MN7MN3MN3MN13MN13MN8MNMN3MN44MN6MN7MN24MN20MN2MNMN2MN19MN7M2N2MN5MN4MN7MNMN9M3N4MN2MN15MN9M2N2MN3M2N2M5N9MN2MNMN5MN6MN3MN4M2N6MN27MN8M3N11M2N2M4N28MN2MNM2NMNM mismatches: 93 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332219859
      XP_003259075
    • Hit length
      579 aa
    • E Value
      0E0
    • BLAST Score
      938.3 bits
    • Similarity
      92.06%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XP_003259075
      100% cov
    • Alignment Length
      579 aa
    • CIGAR string
      3MN5M2NMN8MN2MNMN5MNM2N4M2N6MNMN2MN2MN15MN12M2NMN9MNM2N6MN6MN6MN2MN3MN15M2N2MN7MNMNMN5MN3MN32MN3MN16M2N26MN6MN7MN4MN2MN37MN4MN2MN15M2N5MN4MN9MN4MN7MN11M3N4MN2MN2MN5MN3MN2MN8M3N6M2N3M4N14MN2M2N18MN9MN8MN28MN10MN2MN2MN31MNM2NMNM mismatches: 87 - insertions: 0 - deletions: 0
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296207858
      XP_002750826
    • Hit length
      579 aa
    • E Value
      0E0
    • BLAST Score
      935.6 bits
    • Similarity
      92.06%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XP_002750826
      100% cov
    • Alignment Length
      579 aa
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:26348094
      BAC37695
      1 of 3 hits reported for Mus musculus.
    • Hit length
      579 aa
    • E Value
      0E0
    • BLAST Score
      925.2 bits
    • Similarity
      89.64%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      BAC37695
      100% cov
    • Alignment Length
      579 aa
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:114556348
      XP_001161208
    • Hit length
      579 aa
    • E Value
      0E0
    • BLAST Score
      922.2 bits
    • Similarity
      92.4%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XP_001161208
      100% cov
    • Alignment Length
      579 aa
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:194207501
      XP_001916171
    • Hit length
      579 aa
    • E Value
      0E0
    • BLAST Score
      921.8 bits
    • Similarity
      93.26%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XP_001916171
      100% cov
    • Alignment Length
      579 aa
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:166795287
      NP_001432
      1 of 4 hits reported for Homo sapiens.
    • Hit length
      579 aa
    • E Value
      0E0
    • BLAST Score
      921.4 bits
    • Similarity
      92.57%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NP_001432
      100% cov
    • Alignment Length
      579 aa
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301768194
      XP_002919521
    • Hit length
      579 aa
    • E Value
      0E0
    • BLAST Score
      918.3 bits
    • Similarity
      93.44%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XP_002919521
      100% cov
    • Alignment Length
      579 aa
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:13162304
      NP_077046
    • Hit length
      579 aa
    • E Value
      0E0
    • BLAST Score
      888.6 bits
    • Similarity
      89.81%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NP_077046
      100% cov
    • Alignment Length
      579 aa
Occurrence
19 times in PatSeqDB
Tools
PatSeq Finder

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