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Search for Biological Sequences disclosed in Patents

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Data obtained from: DDBJ Pat NCBI GenBank EMBL-EBI Pat USPTO Fulltext
47 sequences found in this patent (in total)

Displaying 1 - 10 of 47 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
1,277
Type
DNA
Locations
Claims, Detailed Description, Drawings, Summary

Declared organism:
Not specified

Determined organism:
  • Gallus gallus

    Gallus gallus

    • Public DB hit
      GI:45382238
      NM_204821
      1 of 2 hits reported for Gallus gallus.
    • Hit length
      1,535 bp
    • E Value
      0E0
    • BLAST Score
      2,359.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      NM_204821
      83.19% cov
    • Alignment Length
      1,277 bp
    • CIGAR string
      1277M mismatches: 0 - insertions: 0 - deletions: 0
  • Taeniopygia guttata

    Taeniopygia guttata

    • Public DB hit
      GI:224044656
      XM_002190708
    • Hit length
      1,278 bp
    • E Value
      0E0
    • BLAST Score
      1,615.1 bits
    • Similarity
      89.82%
    • Coverage
      98.98%
    • Alignment (schematic)

      SEQ ID NO 1
      98.98% cov
      XM_002190708
      98.9% cov
    • Alignment Length
      1,277 bp
    • CIGAR string
      4MN104M2N6MN13MN197MN2MN32MN2MN11MN20MN5MN11MN17MN20MN5MN20MN14MN11MN14MN56MN2MN5MN2MN2MN20MN5MN6MNMN2MN2MN23MN5MN3MNMN7MD2MIMN3MN4MN5MN2MN8MN23MI2MD4MN6MDMI47MN8MN8MN5MN14MN8M2N4MDMND3MD2M2N3MN4MN6MN9M2N4M2N3MN5MN2MN4MDMI19MN2MN13MNMN2MN3MN4MN2M2N16MN2MN8MN2MN27MN4MN3MN7MN26MN5MN2MN11MN2MN6MN2MD3MI3MNIMD16MI3MN2IM2NMI3MN2D4MNDMI2MNMIMNIMD2MNM2N2MNMN8MN8MN42MNMN5MN12MN3M13H mismatches: 104 - insertions: 13 - deletions: 13
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:161484664
      NM_009170
      1 of 5 hits reported for Mus musculus.
    • Hit length
      2,727 bp
    • E Value
      0E0
    • BLAST Score
      898.6 bits
    • Similarity
      82.27%
    • Coverage
      83.32%
    • Alignment (schematic)

      SEQ ID NO 1
      83.32% cov
      NM_009170
      38.91% cov
    • Alignment Length
      1,083 bp
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332870270
      XM_001147185
    • Hit length
      1,570 bp
    • E Value
      0E0
    • BLAST Score
      859.8 bits
    • Similarity
      86.51%
    • Coverage
      61.71%
    • Alignment (schematic)

      SEQ ID NO 1
      61.71% cov
      XM_001147185
      50% cov
    • Alignment Length
      793 bp
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332263734
      XM_003280860
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      1,570 bp
    • E Value
      0E0
    • BLAST Score
      854.3 bits
    • Similarity
      86.36%
    • Coverage
      61.71%
    • Alignment (schematic)

      SEQ ID NO 1
      61.71% cov
      XM_003280860
      50% cov
    • Alignment Length
      792 bp
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:21071042
      NM_000193
      1 of 3 hits reported for Homo sapiens.
    • Hit length
      1,576 bp
    • E Value
      0E0
    • BLAST Score
      854.3 bits
    • Similarity
      86.38%
    • Coverage
      61.71%
    • Alignment (schematic)

      SEQ ID NO 1
      61.71% cov
      NM_000193
      49.81% cov
    • Alignment Length
      793 bp
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:8394266
      NM_017221
      1 of 2 hits reported for Rattus norvegicus.
    • Hit length
      1,715 bp
    • E Value
      0E0
    • BLAST Score
      854.3 bits
    • Similarity
      81.67%
    • Coverage
      82.62%
    • Alignment (schematic)

      SEQ ID NO 1
      82.62% cov
      NM_017221
      61.34% cov
    • Alignment Length
      1,075 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:208967465
      AB464234
      1 of 2 hits reported for synthetic construct.
    • Hit length
      1,403 bp
    • E Value
      0E0
    • BLAST Score
      854.3 bits
    • Similarity
      86.38%
    • Coverage
      61.71%
    • Alignment (schematic)

      SEQ ID NO 1
      61.71% cov
      AB464234
      55.95% cov
    • Alignment Length
      793 bp
Occurrence
112 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
1,190
Type
DNA
Locations
Claims, Detailed Description, Drawings, Summary

Declared organism:
Not specified

Determined organism:
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:164565413
      NM_007857
      1 of 4 hits reported for Mus musculus.
    • Hit length
      2,381 bp
    • E Value
      0E0
    • BLAST Score
      2,198.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NM_007857
      49.98% cov
    • Alignment Length
      1,190 bp
    • CIGAR string
      1190M mismatches: 0 - insertions: 0 - deletions: 0
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:162319587
      BC156905
      1 of 3 hits reported for synthetic construct.
    • Hit length
      1,252 bp
    • E Value
      0E0
    • BLAST Score
      2,196.8 bits
    • Similarity
      100%
    • Coverage
      99.92%
    • Alignment (schematic)

      SEQ ID NO 2
      99.92% cov
      BC156905
      94.97% cov
    • Alignment Length
      1,189 bp
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:274327781
      NM_053367
    • Hit length
      2,479 bp
    • E Value
      0E0
    • BLAST Score
      1,966 bits
    • Similarity
      96.55%
    • Coverage
      99.75%
    • Alignment (schematic)

      SEQ ID NO 2
      99.75% cov
      NM_053367
      47.88% cov
    • Alignment Length
      1,187 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296211563
      XM_002752427
    • Hit length
      1,456 bp
    • E Value
      0E0
    • BLAST Score
      1,461.8 bits
    • Similarity
      88.88%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XM_002752427
      81.73% cov
    • Alignment Length
      1,196 bp
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:23346635
      NM_021044
      1 of 5 hits reported for Homo sapiens.
    • Hit length
      1,971 bp
    • E Value
      0E0
    • BLAST Score
      1,434.1 bits
    • Similarity
      88.46%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NM_021044
      60.38% cov
    • Alignment Length
      1,196 bp
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:297474550
      XM_002687306
      1 of 4 hits reported for Bos taurus.
    • Hit length
      1,191 bp
    • E Value
      0E0
    • BLAST Score
      1,419.3 bits
    • Similarity
      88.42%
    • Coverage
      99.08%
    • Alignment (schematic)

      SEQ ID NO 2
      99.08% cov
      XM_002687306
      98.99% cov
    • Alignment Length
      1,183 bp
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332206331
      XM_003252196
    • Hit length
      2,352 bp
    • E Value
      0E0
    • BLAST Score
      1,417.5 bits
    • Similarity
      88.22%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XM_003252196
      50.6% cov
    • Alignment Length
      1,197 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297691734
      XM_002823183
    • Hit length
      1,844 bp
    • E Value
      0E0
    • BLAST Score
      1,412 bits
    • Similarity
      88.13%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XM_002823183
      64.53% cov
    • Alignment Length
      1,196 bp
Occurrence
107 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
3
Length
1,056
Type
DNA
Locations
Claims, Detailed Description, Drawings, Summary

Declared organism:
Not specified

Determined organism:
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:31981670
      NM_010544
      1 of 6 hits reported for Mus musculus.
    • Hit length
      2,464 bp
    • E Value
      0E0
    • BLAST Score
      1,927.2 bits
    • Similarity
      99.62%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NM_010544
      42.82% cov
    • Alignment Length
      1,056 bp
    • CIGAR string
      171MN750M2N124MD7M mismatches: 3 - insertions: 0 - deletions: 1
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:213688397
      NM_053384
    • Hit length
      2,272 bp
    • E Value
      0E0
    • BLAST Score
      1,655.7 bits
    • Similarity
      94.99%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NM_053384
      46.43% cov
    • Alignment Length
      1,057 bp
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:289577264
      NM_002181
      1 of 4 hits reported for Homo sapiens.
    • Hit length
      2,074 bp
    • E Value
      0E0
    • BLAST Score
      1,262.4 bits
    • Similarity
      88.26%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NM_002181
      50.82% cov
    • Alignment Length
      1,056 bp
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332815556
      XM_526034
    • Hit length
      2,066 bp
    • E Value
      0E0
    • BLAST Score
      1,256.8 bits
    • Similarity
      88.17%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XM_526034
      51.02% cov
    • Alignment Length
      1,057 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297264928
      XM_001092385
    • Hit length
      2,066 bp
    • E Value
      0E0
    • BLAST Score
      1,251.3 bits
    • Similarity
      88.07%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XM_001092385
      51.02% cov
    • Alignment Length
      1,056 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297669470
      XM_002812870
    • Hit length
      2,023 bp
    • E Value
      0E0
    • BLAST Score
      1,245.8 bits
    • Similarity
      87.97%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XM_002812870
      52.1% cov
    • Alignment Length
      1,056 bp
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:164448607
      NM_001076870
    • Hit length
      1,911 bp
    • E Value
      0E0
    • BLAST Score
      1,194.1 bits
    • Similarity
      87.4%
    • Coverage
      98.77%
    • Alignment (schematic)

      SEQ ID NO 3
      98.77% cov
      NM_001076870
      54.53% cov
    • Alignment Length
      1,048 bp
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301755724
      XM_002913694
    • Hit length
      1,071 bp
    • E Value
      0E0
    • BLAST Score
      1,170 bits
    • Similarity
      87.57%
    • Coverage
      95.74%
    • Alignment (schematic)

      SEQ ID NO 3
      95.74% cov
      XM_002913694
      94.4% cov
    • Alignment Length
      1,014 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296205628
      XM_002749801
    • Hit length
      1,336 bp
    • E Value
      0E0
    • BLAST Score
      1,151.6 bits
    • Similarity
      86.38%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XM_002749801
      78.89% cov
    • Alignment Length
      1,057 bp
Occurrence
4 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
4
Length
1,313
Type
DNA
Locations
Claims, Detailed Description, Drawings, Summary

Declared organism:
Not specified

Determined organism:
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:161484664
      NM_009170
      1 of 5 hits reported for Mus musculus.
    • Hit length
      2,727 bp
    • E Value
      0E0
    • BLAST Score
      2,420.2 bits
    • Similarity
      99.92%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NM_009170
      48.15% cov
    • Alignment Length
      1,313 bp
    • CIGAR string
      364MN948M mismatches: 1 - insertions: 0 - deletions: 0
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:8394266
      NM_017221
    • Hit length
      1,715 bp
    • E Value
      0E0
    • BLAST Score
      2,076.8 bits
    • Similarity
      95.21%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NM_017221
      76.56% cov
    • Alignment Length
      1,316 bp
  • Meriones unguiculatus

    Meriones unguiculatus

    • Public DB hit
      GI:50508062
      AB185174
      1 of 2 hits reported for Meriones unguiculatus.
    • Hit length
      1,679 bp
    • E Value
      0E0
    • BLAST Score
      1,966 bits
    • Similarity
      93.69%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      AB185174
      78.2% cov
    • Alignment Length
      1,315 bp
  • Suncus murinus

    Suncus murinus

    • Public DB hit
      GI:158053031
      AB256041
    • Hit length
      2,230 bp
    • E Value
      0E0
    • BLAST Score
      1,142.3 bits
    • Similarity
      85.03%
    • Coverage
      86.52%
    • Alignment (schematic)

      SEQ ID NO 4
      86.52% cov
      AB256041
      50.81% cov
    • Alignment Length
      1,149 bp
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:194210183
      XM_001914885
    • Hit length
      1,209 bp
    • E Value
      0E0
    • BLAST Score
      1,136.8 bits
    • Similarity
      91.08%
    • Coverage
      63.98%
    • Alignment (schematic)

      SEQ ID NO 4
      63.98% cov
      XM_001914885
      69.48% cov
    • Alignment Length
      841 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296210141
      XM_002807047
    • Hit length
      1,434 bp
    • E Value
      0E0
    • BLAST Score
      1,120.2 bits
    • Similarity
      90.74%
    • Coverage
      63.98%
    • Alignment (schematic)

      SEQ ID NO 4
      63.98% cov
      XM_002807047
      58.58% cov
    • Alignment Length
      842 bp
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332263734
      XM_003280860
    • Hit length
      1,570 bp
    • E Value
      0E0
    • BLAST Score
      1,109.1 bits
    • Similarity
      90.5%
    • Coverage
      63.98%
    • Alignment (schematic)

      SEQ ID NO 4
      63.98% cov
      XM_003280860
      53.5% cov
    • Alignment Length
      842 bp
  • Oryctolagus cuniculus

    Oryctolagus cuniculus

    • Public DB hit
      GI:291397345
      XM_002715022
    • Hit length
      1,356 bp
    • E Value
      0E0
    • BLAST Score
      1,105.4 bits
    • Similarity
      90.52%
    • Coverage
      63.82%
    • Alignment (schematic)

      SEQ ID NO 4
      63.82% cov
      XM_002715022
      61.8% cov
    • Alignment Length
      844 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297682094
      XM_002818721
    • Hit length
      1,570 bp
    • E Value
      0E0
    • BLAST Score
      1,090.6 bits
    • Similarity
      90.05%
    • Coverage
      63.98%
    • Alignment (schematic)

      SEQ ID NO 4
      63.98% cov
      XM_002818721
      53.5% cov
    • Alignment Length
      844 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297289744
      XM_001106515
    • Hit length
      1,570 bp
    • E Value
      0E0
    • BLAST Score
      1,083.3 bits
    • Similarity
      90.02%
    • Coverage
      63.82%
    • Alignment (schematic)

      SEQ ID NO 4
      63.82% cov
      XM_001106515
      53.38% cov
    • Alignment Length
      842 bp
Occurrence
112 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
5
Length
1,256
Type
DNA
Locations
Claims, Detailed Description, Drawings, Summary

Declared organism:
Not specified

Determined organism:
  • Danio rerio

    Danio rerio

    • Public DB hit
      GI:18859356
      NM_131063
      1 of 5 hits reported for Danio rerio.
    • Hit length
      2,600 bp
    • E Value
      0E0
    • BLAST Score
      2,309.4 bits
    • Similarity
      99.84%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NM_131063
      48.31% cov
    • Alignment Length
      1,257 bp
    • CIGAR string
      1111MI74MD70M mismatches: 0 - insertions: 1 - deletions: 1
  • Cyprinus carpio

    Cyprinus carpio

    • Public DB hit
      GI:38373943
      AY460200
    • Hit length
      1,703 bp
    • E Value
      0E0
    • BLAST Score
      1,829.3 bits
    • Similarity
      93.01%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      AY460200
      73.58% cov
    • Alignment Length
      1,259 bp
  • Polypterus bichir

    Polypterus bichir

    • Public DB hit
      GI:145586984
      AB301497
    • Hit length
      1,263 bp
    • E Value
      0E0
    • BLAST Score
      1,159 bits
    • Similarity
      84.85%
    • Coverage
      93.15%
    • Alignment (schematic)

      SEQ ID NO 5
      93.15% cov
      AB301497
      93.11% cov
    • Alignment Length
      1,201 bp
  • Paralichthys olivaceus

    Paralichthys olivaceus

    • Public DB hit
      GI:5441264
      AB029748
    • Hit length
      1,718 bp
    • E Value
      6.28E-172
    • BLAST Score
      614.2 bits
    • Similarity
      76.76%
    • Coverage
      95.7%
    • Alignment (schematic)

      SEQ ID NO 5
      95.7% cov
      AB029748
      69.27% cov
    • Alignment Length
      1,239 bp
  • Astyanax mexicanus

    Astyanax mexicanus

    • Public DB hit
      GI:51511315
      AY661431
    • Hit length
      1,550 bp
    • E Value
      5.03E-148
    • BLAST Score
      534.8 bits
    • Similarity
      79.67%
    • Coverage
      61.23%
    • Alignment (schematic)

      SEQ ID NO 5
      61.23% cov
      AY661431
      49.61% cov
    • Alignment Length
      787 bp
Occurrence
112 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
6
Length
1,425
Type
DNA
Locations
Claims, Detailed Description, Drawings, Summary

Declared organism:
Not specified

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:663156
      L38518
      1 of 6 hits reported for Homo sapiens.
    • Hit length
      1,576 bp
    • E Value
      0E0
    • BLAST Score
      2,621.5 bits
    • Similarity
      99.79%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      L38518
      90.42% cov
    • Alignment Length
      1,425 bp
    • CIGAR string
      1386M3N36M mismatches: 3 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332870270
      XM_001147185
    • Hit length
      1,570 bp
    • E Value
      0E0
    • BLAST Score
      2,597.5 bits
    • Similarity
      99.51%
    • Coverage
      99.93%
    • Alignment (schematic)

      SEQ ID NO 6
      99.93% cov
      XM_001147185
      90.7% cov
    • Alignment Length
      1,424 bp
    • CIGAR string
      575MN274MN393M2N140M3N35M1H mismatches: 7 - insertions: 0 - deletions: 0
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:208967465
      AB464234
      1 of 2 hits reported for synthetic construct.
    • Hit length
      1,403 bp
    • E Value
      0E0
    • BLAST Score
      2,560.6 bits
    • Similarity
      100%
    • Coverage
      97.26%
    • Alignment (schematic)

      SEQ ID NO 6
      97.26% cov
      AB464234
      98.79% cov
    • Alignment Length
      1,386 bp
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332263734
      XM_003280860
    • Hit length
      1,570 bp
    • E Value
      0E0
    • BLAST Score
      2,470.1 bits
    • Similarity
      97.89%
    • Coverage
      99.93%
    • Alignment (schematic)

      SEQ ID NO 6
      99.93% cov
      XM_003280860
      90.7% cov
    • Alignment Length
      1,424 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297682094
      XM_002818721
    • Hit length
      1,570 bp
    • E Value
      0E0
    • BLAST Score
      2,462.7 bits
    • Similarity
      97.76%
    • Coverage
      99.93%
    • Alignment (schematic)

      SEQ ID NO 6
      99.93% cov
      XM_002818721
      90.7% cov
    • Alignment Length
      1,426 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297289744
      XM_001106515
    • Hit length
      1,570 bp
    • E Value
      0E0
    • BLAST Score
      2,331.6 bits
    • Similarity
      96.14%
    • Coverage
      99.93%
    • Alignment (schematic)

      SEQ ID NO 6
      99.93% cov
      XM_001106515
      90.7% cov
    • Alignment Length
      1,425 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296210141
      XM_002807047
    • Hit length
      1,434 bp
    • E Value
      0E0
    • BLAST Score
      1,860.7 bits
    • Similarity
      94.02%
    • Coverage
      86.25%
    • Alignment (schematic)

      SEQ ID NO 6
      86.25% cov
      XM_002807047
      85.7% cov
    • Alignment Length
      1,237 bp
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:73978765
      XM_845357
      1 of 2 hits reported for Canis lupus familiaris.
    • Hit length
      1,386 bp
    • E Value
      0E0
    • BLAST Score
      1,786.8 bits
    • Similarity
      90.07%
    • Coverage
      97.26%
    • Alignment (schematic)

      SEQ ID NO 6
      97.26% cov
      XM_845357
      99.78% cov
    • Alignment Length
      1,400 bp
  • Oryctolagus cuniculus

    Oryctolagus cuniculus

    • Public DB hit
      GI:291397345
      XM_002715022
    • Hit length
      1,356 bp
    • E Value
      0E0
    • BLAST Score
      1,652 bits
    • Similarity
      91.36%
    • Coverage
      84.91%
    • Alignment (schematic)

      SEQ ID NO 6
      84.91% cov
      XM_002715022
      89.16% cov
    • Alignment Length
      1,215 bp
Occurrence
113 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
7
Length
939
Type
DNA
Locations
Claims, Detailed Description, Drawings, Summary

Declared organism:
Not specified

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:663154
      L38517
      1 of 5 hits reported for Homo sapiens.
    • Hit length
      1,277 bp
    • E Value
      0E0
    • BLAST Score
      1,735.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      L38517
      73.53% cov
    • Alignment Length
      939 bp
    • CIGAR string
      939M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332815556
      XM_526034
    • Hit length
      2,066 bp
    • E Value
      0E0
    • BLAST Score
      1,685.3 bits
    • Similarity
      99.15%
    • Coverage
      99.68%
    • Alignment (schematic)

      SEQ ID NO 7
      99.68% cov
      XM_526034
      45.3% cov
    • Alignment Length
      936 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297669470
      XM_002812870
    • Hit length
      2,023 bp
    • E Value
      0E0
    • BLAST Score
      1,668.6 bits
    • Similarity
      98.82%
    • Coverage
      99.68%
    • Alignment (schematic)

      SEQ ID NO 7
      99.68% cov
      XM_002812870
      46.27% cov
    • Alignment Length
      936 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297264928
      XM_001092385
    • Hit length
      2,066 bp
    • E Value
      0E0
    • BLAST Score
      1,624.3 bits
    • Similarity
      97.97%
    • Coverage
      99.68%
    • Alignment (schematic)

      SEQ ID NO 7
      99.68% cov
      XM_001092385
      45.3% cov
    • Alignment Length
      936 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:168745827
      CU689958
      1 of 2 hits reported for synthetic construct.
    • Hit length
      1,326 bp
    • E Value
      0E0
    • BLAST Score
      1,572.6 bits
    • Similarity
      98.87%
    • Coverage
      93.82%
    • Alignment (schematic)

      SEQ ID NO 7
      93.82% cov
      CU689958
      66.52% cov
    • Alignment Length
      884 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296205628
      XM_002749801
    • Hit length
      1,336 bp
    • E Value
      0E0
    • BLAST Score
      1,519.1 bits
    • Similarity
      95.94%
    • Coverage
      99.68%
    • Alignment (schematic)

      SEQ ID NO 7
      99.68% cov
      XM_002749801
      70.06% cov
    • Alignment Length
      936 bp
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:164448607
      NM_001076870
    • Hit length
      1,911 bp
    • E Value
      0E0
    • BLAST Score
      1,303 bits
    • Similarity
      91.77%
    • Coverage
      99.68%
    • Alignment (schematic)

      SEQ ID NO 7
      99.68% cov
      NM_001076870
      48.98% cov
    • Alignment Length
      936 bp
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332246582
      XM_003272384
    • Hit length
      2,022 bp
    • E Value
      0E0
    • BLAST Score
      1,286.4 bits
    • Similarity
      97.85%
    • Coverage
      79.34%
    • Alignment (schematic)

      SEQ ID NO 7
      79.34% cov
      XM_003272384
      36.8% cov
    • Alignment Length
      745 bp
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301755724
      XM_002913694
      1 of 2 hits reported for Ailuropoda melanoleuca.
    • Hit length
      1,071 bp
    • E Value
      0E0
    • BLAST Score
      1,280.8 bits
    • Similarity
      91.35%
    • Coverage
      99.68%
    • Alignment (schematic)

      SEQ ID NO 7
      99.68% cov
      XM_002913694
      87.39% cov
    • Alignment Length
      936 bp
  • Oryctolagus cuniculus

    Oryctolagus cuniculus

    • Public DB hit
      GI:291392258
      XM_002712595
      1 of 2 hits reported for Oryctolagus cuniculus.
    • Hit length
      1,290 bp
    • E Value
      0E0
    • BLAST Score
      1,280.8 bits
    • Similarity
      91.36%
    • Coverage
      99.68%
    • Alignment (schematic)

      SEQ ID NO 7
      99.68% cov
      XM_002712595
      72.56% cov
    • Alignment Length
      937 bp
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:194211319
      XM_001491778
    • Hit length
      1,032 bp
    • E Value
      0E0
    • BLAST Score
      1,275.3 bits
    • Similarity
      91.57%
    • Coverage
      98.4%
    • Alignment (schematic)

      SEQ ID NO 7
      98.4% cov
      XM_001491778
      89.53% cov
    • Alignment Length
      925 bp
Occurrence
29 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
8
Length
425
Type
peptide
Locations
Claims, Detailed Description, Drawings, Summary

Declared organism:
Not specified

Determined organism:
  • Gallus gallus

    Gallus gallus

    • Public DB hit
      GI:45382239
      NP_990152
    • Hit length
      425 aa
    • E Value
      0E0
    • BLAST Score
      879 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NP_990152
      100% cov
    • Alignment Length
      425 aa
    • CIGAR string
      425M mismatches: 0 - insertions: 0 - deletions: 0
  • Taeniopygia guttata

    Taeniopygia guttata

    • Public DB hit
      GI:224044657
      XP_002190744
    • Hit length
      425 aa
    • E Value
      0E0
    • BLAST Score
      786.6 bits
    • Similarity
      93.66%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XP_002190744
      100% cov
    • Alignment Length
      426 aa
    • CIGAR string
      MN34MN2MN168MN2MN9MN6MN2M2N14MNMNMN28MN3MNMDM2N2MN5MNMN5MN6M2N4MN2MN22MN25MNM2N6M2NMINMNM5N20MN6M4NM mismatches: 42 - insertions: 1 - deletions: 1
  • Monodelphis domestica

    Monodelphis domestica

    • Public DB hit
      GI:309951106
      NP_001185482
    • Hit length
      477 aa
    • E Value
      0E0
    • BLAST Score
      692.6 bits
    • Similarity
      79.92%
    • Coverage
      99.29%
    • Alignment (schematic)

      SEQ ID NO 8
      99.29% cov
      NP_001185482
      100% cov
    • Alignment Length
      478 aa
    • CIGAR string
      3H6MN3M5N2MN4MN6MN36MN141MN19M2N9MN4MNM3NMN7MN2MN14MD2MNM2N12INM2N2M14IMN4M3N7M2NM2IM3N4MN6MN3MNMN39M2N3MNMNM3N28INMNM2N2MN6MN3MN2MNMN2MNMN6M4NM mismatches: 62 - insertions: 56 - deletions: 1
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:149031428
      EDL86418
      1 of 2 hits reported for Rattus norvegicus.
    • Hit length
      437 aa
    • E Value
      0E0
    • BLAST Score
      686.4 bits
    • Similarity
      85.45%
    • Coverage
      99.29%
    • Alignment (schematic)

      SEQ ID NO 8
      99.29% cov
      EDL86418
      99.77% cov
    • Alignment Length
      440 aa
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:73978764
      XP_861428
      1 of 2 hits reported for Canis lupus familiaris.
    • Hit length
      434 aa
    • E Value
      0E0
    • BLAST Score
      684.5 bits
    • Similarity
      85.78%
    • Coverage
      99.29%
    • Alignment (schematic)

      SEQ ID NO 8
      99.29% cov
      XP_861428
      100% cov
    • Alignment Length
      436 aa
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:21617861
      NP_033196
      1 of 2 hits reported for Mus musculus.
    • Hit length
      437 aa
    • E Value
      0E0
    • BLAST Score
      683.3 bits
    • Similarity
      85.19%
    • Coverage
      99.29%
    • Alignment (schematic)

      SEQ ID NO 8
      99.29% cov
      NP_033196
      99.77% cov
    • Alignment Length
      439 aa
  • Oryctolagus cuniculus

    Oryctolagus cuniculus

    • Public DB hit
      GI:291397346
      XP_002715068
    • Hit length
      451 aa
    • E Value
      0E0
    • BLAST Score
      672.9 bits
    • Similarity
      83.41%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XP_002715068
      100% cov
    • Alignment Length
      452 aa
  • Meriones unguiculatus

    Meriones unguiculatus

    • Public DB hit
      GI:50508063
      BAD30089
    • Hit length
      437 aa
    • E Value
      0E0
    • BLAST Score
      670.6 bits
    • Similarity
      83.79%
    • Coverage
      99.06%
    • Alignment (schematic)

      SEQ ID NO 8
      99.06% cov
      BAD30089
      99.54% cov
    • Alignment Length
      438 aa
  • Suncus murinus

    Suncus murinus

    • Public DB hit
      GI:158053032
      BAF81895
    • Hit length
      431 aa
    • E Value
      0E0
    • BLAST Score
      666 bits
    • Similarity
      83.29%
    • Coverage
      96%
    • Alignment (schematic)

      SEQ ID NO 8
      96% cov
      BAF81895
      96.29% cov
    • Alignment Length
      419 aa
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:4506939
      NP_000184
      1 of 2 hits reported for Homo sapiens.
    • Hit length
      462 aa
    • E Value
      0E0
    • BLAST Score
      662.5 bits
    • Similarity
      81.53%
    • Coverage
      94.59%
    • Alignment (schematic)

      SEQ ID NO 8
      94.59% cov
      NP_000184
      95.67% cov
    • Alignment Length
      444 aa
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297289745
      XP_001106515
    • Hit length
      465 aa
    • E Value
      0E0
    • BLAST Score
      661 bits
    • Similarity
      81.26%
    • Coverage
      94.59%
    • Alignment (schematic)

      SEQ ID NO 8
      94.59% cov
      XP_001106515
      95.05% cov
    • Alignment Length
      443 aa
Occurrence
127 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
9
Length
396
Type
peptide
Locations
Claims, Detailed Description, Drawings, Summary

Declared organism:
Not specified

Determined organism:
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:6681181
      NP_031883
    • Hit length
      396 aa
    • E Value
      0E0
    • BLAST Score
      796.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      NP_031883
      100% cov
    • Alignment Length
      396 aa
    • CIGAR string
      396M mismatches: 0 - insertions: 0 - deletions: 0
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:274327782
      NP_445819
    • Hit length
      396 aa
    • E Value
      0E0
    • BLAST Score
      793.5 bits
    • Similarity
      99.75%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      NP_445819
      100% cov
    • Alignment Length
      396 aa
    • CIGAR string
      19MN288MN87M mismatches: 2 - insertions: 0 - deletions: 0
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:194666942
      XP_001788921
    • Hit length
      396 aa
    • E Value
      0E0
    • BLAST Score
      783.1 bits
    • Similarity
      99.49%
    • Coverage
      99.75%
    • Alignment (schematic)

      SEQ ID NO 9
      99.75% cov
      XP_001788921
      99.75% cov
    • Alignment Length
      395 aa
    • CIGAR string
      7MN10MN32MN129MN126MN76MN8MN1H mismatches: 7 - insertions: 0 - deletions: 0
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301783637
      XP_002927234
    • Hit length
      396 aa
    • E Value
      0E0
    • BLAST Score
      755.7 bits
    • Similarity
      98.99%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XP_002927234
      100% cov
    • Alignment Length
      396 aa
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296211564
      XP_002752473
    • Hit length
      396 aa
    • E Value
      0E0
    • BLAST Score
      749.6 bits
    • Similarity
      98.99%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XP_002752473
      100% cov
    • Alignment Length
      396 aa
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:19482158
      NP_066382
      1 of 3 hits reported for Homo sapiens.
    • Hit length
      396 aa
    • E Value
      0E0
    • BLAST Score
      740.3 bits
    • Similarity
      98.67%
    • Coverage
      94.95%
    • Alignment (schematic)

      SEQ ID NO 9
      94.95% cov
      NP_066382
      94.95% cov
    • Alignment Length
      376 aa
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332206332
      XP_003252244
    • Hit length
      396 aa
    • E Value
      0E0
    • BLAST Score
      703 bits
    • Similarity
      95.21%
    • Coverage
      94.95%
    • Alignment (schematic)

      SEQ ID NO 9
      94.95% cov
      XP_003252244
      94.95% cov
    • Alignment Length
      376 aa
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:194211949
      XP_001915405
    • Hit length
      398 aa
    • E Value
      0E0
    • BLAST Score
      684.1 bits
    • Similarity
      92.98%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XP_001915405
      100% cov
    • Alignment Length
      399 aa
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297262274
      XP_001099775
    • Hit length
      558 aa
    • E Value
      6.8E-164
    • BLAST Score
      582 bits
    • Similarity
      99.32%
    • Coverage
      74.75%
    • Alignment (schematic)

      SEQ ID NO 9
      74.75% cov
      XP_001099775
      53.05% cov
    • Alignment Length
      296 aa
  • Anolis carolinensis

    Anolis carolinensis

    • Public DB hit
      GI:327277053
      XP_003223280
    • Hit length
      410 aa
    • E Value
      5.21E-158
    • BLAST Score
      562.8 bits
    • Similarity
      80.3%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XP_003223280
      98.54% cov
    • Alignment Length
      406 aa
  • Xenopus (Silurana) tropicalis

    Xenopus (Silurana) tropicalis

    • Public DB hit
      GI:148232136
      NP_001090638
    • Hit length
      396 aa
    • E Value
      3.48E-143
    • BLAST Score
      513.5 bits
    • Similarity
      77.63%
    • Coverage
      97.98%
    • Alignment (schematic)

      SEQ ID NO 9
      97.98% cov
      NP_001090638
      96.72% cov
    • Alignment Length
      389 aa
  • Xenopus laevis

    Xenopus laevis

    • Public DB hit
      GI:148223535
      NP_001079260
    • Hit length
      396 aa
    • E Value
      1.33E-140
    • BLAST Score
      505 bits
    • Similarity
      77.18%
    • Coverage
      98.23%
    • Alignment (schematic)

      SEQ ID NO 9
      98.23% cov
      NP_001079260
      96.97% cov
    • Alignment Length
      390 aa
Occurrence
150 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
10
Length
336
Type
peptide
Locations
Claims, Detailed Description, Drawings, Summary

Declared organism:
Not specified

Determined organism:
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:2440121
      CAA53923
      1 of 3 hits reported for Mus musculus.
    • Hit length
      336 aa
    • E Value
      0E0
    • BLAST Score
      688 bits
    • Similarity
      99.4%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      CAA53923
      100% cov
    • Alignment Length
      336 aa
    • CIGAR string
      57MN249MN28M mismatches: 2 - insertions: 0 - deletions: 0
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:213688398
      NP_445836
    • Hit length
      411 aa
    • E Value
      0E0
    • BLAST Score
      649.4 bits
    • Similarity
      97.92%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      NP_445836
      81.75% cov
    • Alignment Length
      336 aa
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297264929
      XP_001092385
    • Hit length
      411 aa
    • E Value
      1.28E-180
    • BLAST Score
      637.5 bits
    • Similarity
      97.62%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XP_001092385
      81.75% cov
    • Alignment Length
      336 aa
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297669471
      XP_002812916
    • Hit length
      411 aa
    • E Value
      3.64E-180
    • BLAST Score
      636 bits
    • Similarity
      97.32%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XP_002812916
      81.75% cov
    • Alignment Length
      336 aa
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:119392086
      NP_002172
      1 of 2 hits reported for Homo sapiens.
    • Hit length
      411 aa
    • E Value
      3.89E-180
    • BLAST Score
      636 bits
    • Similarity
      97.62%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      NP_002172
      81.75% cov
    • Alignment Length
      336 aa
  • Oryctolagus cuniculus

    Oryctolagus cuniculus

    • Public DB hit
      GI:291392259
      XP_002712641
    • Hit length
      429 aa
    • E Value
      5.39E-179
    • BLAST Score
      632.1 bits
    • Similarity
      96.73%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XP_002712641
      78.32% cov
    • Alignment Length
      336 aa
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:311273083
      XP_001925521
    • Hit length
      410 aa
    • E Value
      9.99E-179
    • BLAST Score
      630.9 bits
    • Similarity
      96.73%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XP_001925521
      81.95% cov
    • Alignment Length
      336 aa
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:114583388
      XP_526034
    • Hit length
      411 aa
    • E Value
      1.82E-178
    • BLAST Score
      630.2 bits
    • Similarity
      96.73%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XP_526034
      81.75% cov
    • Alignment Length
      336 aa
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296205629
      XP_002749847
    • Hit length
      411 aa
    • E Value
      1.31E-177
    • BLAST Score
      627.5 bits
    • Similarity
      95.83%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XP_002749847
      81.75% cov
    • Alignment Length
      336 aa
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301755725
      XP_002913740
      1 of 2 hits reported for Ailuropoda melanoleuca.
    • Hit length
      356 aa
    • E Value
      2.36E-176
    • BLAST Score
      623.2 bits
    • Similarity
      96.13%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XP_002913740
      94.38% cov
    • Alignment Length
      336 aa
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332246583
      XP_003272432
    • Hit length
      411 aa
    • E Value
      5.05E-173
    • BLAST Score
      612.1 bits
    • Similarity
      94.35%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XP_003272432
      81.75% cov
    • Alignment Length
      336 aa
Occurrence
7 times in PatSeqDB
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