Development Of A Preventive Vaccine For Filovirus Infection In Primates

  • Published: Oct 19, 2005
  • Earliest Priority: Oct 01 2001
  • Family: 2
  • Cited Works: 3
  • Cited by: 0
  • Cites: 1
  • Sequences: 52
  • Additional Info: Cited Works
Data obtained from: EMBL-EBI Pat DDBJ Pat NCBI GenBank (EBI)
52 sequences found in this patent (in total)

Filter sequences

Clear
Download sequences in fasta format: 4 peptides 48 DNAs

Displaying 1 - 10 of 52 sequences

SEQ ID NO
Length
Sequence Type
Locations
Declared organism
Determined organism
Occurrence
Tools
SEQ ID NO
1
Length
7,154
Sequence Type
DNA
Locations
Undetermined
Declared organism
Artificial
Determined organism
  • Zaire ebolavirus

    Zaire ebolavirus

    • Public DB hit
      GI:2522270
      L11365
      1 of 24 hits reported for Zaire ebolavirus.
    • Hit length
      11,742 bp
    • E Value
      0E0
    • BLAST Score
      4,102.5 bits
    • Similarity
      99.96%
    • Coverage
      31.09%
    • Alignment (schematic)

      SEQ ID NO 1
      31.09% cov
      L11365
      18.94% cov
    • Alignment Length
      2,224 bp
    • CIGAR string
      1928H1993MN230M3002H mismatches: 1 - insertions: 0 - deletions: 0
  • 1976

    1976

    • Public DB hit
      GI:10141003
      AF086833
    • Hit length
      18,959 bp
    • E Value
      0E0
    • BLAST Score
      4,095.1 bits
    • Similarity
      99.91%
    • Coverage
      31.09%
    • Alignment (schematic)

      SEQ ID NO 1
      31.09% cov
      AF086833
      11.73% cov
    • Alignment Length
      2,224 bp
    • CIGAR string
      1928H896MD1096MN230M3002H mismatches: 1 - insertions: 0 - deletions: 1
Occurrence
25 times in PatSeqDB
Tools
SEQ ID NO
2
Length
7,188
Sequence Type
DNA
Locations
Undetermined
Declared organism
Artificial
Determined organism
  • Zaire ebolavirus

    Zaire ebolavirus

    • Public DB hit
      GI:2522270
      L11365
      1 of 24 hits reported for Zaire ebolavirus.
    • Hit length
      11,742 bp
    • E Value
      0E0
    • BLAST Score
      4,102.5 bits
    • Similarity
      99.96%
    • Coverage
      30.94%
    • Alignment (schematic)

      SEQ ID NO 2
      30.94% cov
      L11365
      18.94% cov
    • Alignment Length
      2,224 bp
    • CIGAR string
      1928H1993MN230M3036H mismatches: 1 - insertions: 0 - deletions: 0
  • 1976

    1976

    • Public DB hit
      GI:10141003
      AF086833
    • Hit length
      18,959 bp
    • E Value
      0E0
    • BLAST Score
      4,095.1 bits
    • Similarity
      99.91%
    • Coverage
      30.94%
    • Alignment (schematic)

      SEQ ID NO 2
      30.94% cov
      AF086833
      11.73% cov
    • Alignment Length
      2,224 bp
    • CIGAR string
      1928H896MD1096MN230M3036H mismatches: 1 - insertions: 0 - deletions: 1
Occurrence
25 times in PatSeqDB
Tools
SEQ ID NO
3
Length
6,624
Sequence Type
DNA
Locations
Undetermined
Declared organism
Artificial
Determined organism
  • Human herpesvirus 5

    Human herpesvirus 5

    • Public DB hit
      GI:239909366
      GQ121041
      1 of 16 hits reported for Human herpesvirus 5.
    • Hit length
      238,311 bp
    • E Value
      0E0
    • BLAST Score
      2,965 bits
    • Similarity
      99.15%
    • Coverage
      24.86%
    • Alignment (schematic)

      SEQ ID NO 3
      24.86% cov
      GQ121041
      0.69% cov
    • Alignment Length
      1,648 bp
    • CIGAR string
      235H31MN38MN2MN271MN65MN75MN114MN3MN7MN780MDMI17MN223MNMN6M4742H mismatches: 12 - insertions: 1 - deletions: 1
  • Expression vector pGA3

    Expression vector pGA3

    • Public DB hit
      GI:16930604
      AF425299
    • Hit length
      3,893 bp
    • E Value
      0E0
    • BLAST Score
      2,953.9 bits
    • Similarity
      99.21%
    • Coverage
      24.73%
    • Alignment (schematic)

      SEQ ID NO 3
      24.73% cov
      AF425299
      42.08% cov
    • Alignment Length
      1,639 bp
  • Cloning vector pRama-35

    Cloning vector pRama-35

    • Public DB hit
      GI:254575550
      GQ258350
    • Hit length
      5,312 bp
    • E Value
      0E0
    • BLAST Score
      2,931.8 bits
    • Similarity
      98.9%
    • Coverage
      24.74%
    • Alignment (schematic)

      SEQ ID NO 3
      24.74% cov
      GQ258350
      30.91% cov
    • Alignment Length
      1,643 bp
  • Cloning vector pRama-34

    Cloning vector pRama-34

    • Public DB hit
      GI:254575546
      GQ258349
    • Hit length
      8,361 bp
    • E Value
      0E0
    • BLAST Score
      2,931.8 bits
    • Similarity
      98.9%
    • Coverage
      24.74%
    • Alignment (schematic)

      SEQ ID NO 3
      24.74% cov
      GQ258349
      19.64% cov
    • Alignment Length
      1,643 bp
  • Cloning vector pRama-31

    Cloning vector pRama-31

    • Public DB hit
      GI:254575543
      GQ258348
    • Hit length
      4,828 bp
    • E Value
      0E0
    • BLAST Score
      2,931.8 bits
    • Similarity
      98.9%
    • Coverage
      24.74%
    • Alignment (schematic)

      SEQ ID NO 3
      24.74% cov
      GQ258348
      34.01% cov
    • Alignment Length
      1,643 bp
  • Expression vector pGA1

    Expression vector pGA1

    • Public DB hit
      GI:16930600
      AF425297
    • Hit length
      3,898 bp
    • E Value
      0E0
    • BLAST Score
      2,931.8 bits
    • Similarity
      98.9%
    • Coverage
      24.74%
    • Alignment (schematic)

      SEQ ID NO 3
      24.74% cov
      AF425297
      42.12% cov
    • Alignment Length
      1,643 bp
  • Expression vector AF286076

    Expression vector AF286076

    • Public DB hit
      GI:12034709
      AF286076
    • Hit length
      5,130 bp
    • E Value
      0E0
    • BLAST Score
      2,929.9 bits
    • Similarity
      98.96%
    • Coverage
      24.73%
    • Alignment (schematic)

      SEQ ID NO 3
      24.73% cov
      AF286076
      31.89% cov
    • Alignment Length
      1,640 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:16798502
      AF430344
      1 of 2 hits reported for synthetic construct.
    • Hit length
      9,918 bp
    • E Value
      0E0
    • BLAST Score
      2,928.1 bits
    • Similarity
      98.96%
    • Coverage
      24.73%
    • Alignment (schematic)

      SEQ ID NO 3
      24.73% cov
      AF430344
      16.48% cov
    • Alignment Length
      1,639 bp
  • Cloning vector pCMVLacI

    Cloning vector pCMVLacI

    • Public DB hit
      GI:1515453
      U64448
    • Hit length
      7,995 bp
    • E Value
      0E0
    • BLAST Score
      2,922.5 bits
    • Similarity
      98.73%
    • Coverage
      24.86%
    • Alignment (schematic)

      SEQ ID NO 3
      24.86% cov
      U64448
      20.56% cov
    • Alignment Length
      1,649 bp
Occurrence
25 times in PatSeqDB
Tools
SEQ ID NO
4
Length
6,561
Sequence Type
DNA
Locations
Undetermined
Declared organism
Artificial
Determined organism
  • Human herpesvirus 5

    Human herpesvirus 5

    • Public DB hit
      GI:239909366
      GQ121041
      1 of 16 hits reported for Human herpesvirus 5.
    • Hit length
      238,311 bp
    • E Value
      0E0
    • BLAST Score
      2,965 bits
    • Similarity
      99.15%
    • Coverage
      25.1%
    • Alignment (schematic)

      SEQ ID NO 4
      25.1% cov
      GQ121041
      0.69% cov
    • Alignment Length
      1,648 bp
    • CIGAR string
      235H31MN38MN2MN271MN65MN75MN114MN3MN7MN780MDMI17MN223MNMN6M4679H mismatches: 12 - insertions: 1 - deletions: 1
  • Expression vector pGA3

    Expression vector pGA3

    • Public DB hit
      GI:16930604
      AF425299
    • Hit length
      3,893 bp
    • E Value
      0E0
    • BLAST Score
      2,953.9 bits
    • Similarity
      99.21%
    • Coverage
      24.97%
    • Alignment (schematic)

      SEQ ID NO 4
      24.97% cov
      AF425299
      42.08% cov
    • Alignment Length
      1,639 bp
  • Cloning vector pRama-35

    Cloning vector pRama-35

    • Public DB hit
      GI:254575550
      GQ258350
    • Hit length
      5,312 bp
    • E Value
      0E0
    • BLAST Score
      2,931.8 bits
    • Similarity
      98.9%
    • Coverage
      24.98%
    • Alignment (schematic)

      SEQ ID NO 4
      24.98% cov
      GQ258350
      30.91% cov
    • Alignment Length
      1,643 bp
  • Cloning vector pRama-34

    Cloning vector pRama-34

    • Public DB hit
      GI:254575546
      GQ258349
    • Hit length
      8,361 bp
    • E Value
      0E0
    • BLAST Score
      2,931.8 bits
    • Similarity
      98.9%
    • Coverage
      24.98%
    • Alignment (schematic)

      SEQ ID NO 4
      24.98% cov
      GQ258349
      19.64% cov
    • Alignment Length
      1,643 bp
  • Cloning vector pRama-31

    Cloning vector pRama-31

    • Public DB hit
      GI:254575543
      GQ258348
    • Hit length
      4,828 bp
    • E Value
      0E0
    • BLAST Score
      2,931.8 bits
    • Similarity
      98.9%
    • Coverage
      24.98%
    • Alignment (schematic)

      SEQ ID NO 4
      24.98% cov
      GQ258348
      34.01% cov
    • Alignment Length
      1,643 bp
  • Expression vector pGA1

    Expression vector pGA1

    • Public DB hit
      GI:16930600
      AF425297
    • Hit length
      3,898 bp
    • E Value
      0E0
    • BLAST Score
      2,931.8 bits
    • Similarity
      98.9%
    • Coverage
      24.98%
    • Alignment (schematic)

      SEQ ID NO 4
      24.98% cov
      AF425297
      42.12% cov
    • Alignment Length
      1,643 bp
  • Expression vector AF286076

    Expression vector AF286076

    • Public DB hit
      GI:12034709
      AF286076
    • Hit length
      5,130 bp
    • E Value
      0E0
    • BLAST Score
      2,929.9 bits
    • Similarity
      98.96%
    • Coverage
      24.97%
    • Alignment (schematic)

      SEQ ID NO 4
      24.97% cov
      AF286076
      31.89% cov
    • Alignment Length
      1,640 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:16798502
      AF430344
      1 of 2 hits reported for synthetic construct.
    • Hit length
      9,918 bp
    • E Value
      0E0
    • BLAST Score
      2,928.1 bits
    • Similarity
      98.96%
    • Coverage
      24.97%
    • Alignment (schematic)

      SEQ ID NO 4
      24.97% cov
      AF430344
      16.48% cov
    • Alignment Length
      1,639 bp
  • Cloning vector pCMVLacI

    Cloning vector pCMVLacI

    • Public DB hit
      GI:1515453
      U64448
    • Hit length
      7,995 bp
    • E Value
      0E0
    • BLAST Score
      2,922.5 bits
    • Similarity
      98.73%
    • Coverage
      25.1%
    • Alignment (schematic)

      SEQ ID NO 4
      25.1% cov
      U64448
      20.56% cov
    • Alignment Length
      1,649 bp
Occurrence
25 times in PatSeqDB
Tools
SEQ ID NO
5
Length
6,724
Sequence Type
DNA
Locations
Undetermined
Declared organism
Artificial
Determined organism
  • Human herpesvirus 5

    Human herpesvirus 5

    • Public DB hit
      GI:239909366
      GQ121041
      1 of 16 hits reported for Human herpesvirus 5.
    • Hit length
      238,311 bp
    • E Value
      0E0
    • BLAST Score
      2,965 bits
    • Similarity
      99.15%
    • Coverage
      24.49%
    • Alignment (schematic)

      SEQ ID NO 5
      24.49% cov
      GQ121041
      0.69% cov
    • Alignment Length
      1,648 bp
    • CIGAR string
      235H31MN38MN2MN271MN65MN75MN114MN3MN7MN780MDMI17MN223MNMN6M4842H mismatches: 12 - insertions: 1 - deletions: 1
  • Expression vector pGA3

    Expression vector pGA3

    • Public DB hit
      GI:16930604
      AF425299
    • Hit length
      3,893 bp
    • E Value
      0E0
    • BLAST Score
      2,953.9 bits
    • Similarity
      99.21%
    • Coverage
      24.36%
    • Alignment (schematic)

      SEQ ID NO 5
      24.36% cov
      AF425299
      42.08% cov
    • Alignment Length
      1,639 bp
  • Cloning vector pRama-35

    Cloning vector pRama-35

    • Public DB hit
      GI:254575550
      GQ258350
    • Hit length
      5,312 bp
    • E Value
      0E0
    • BLAST Score
      2,931.8 bits
    • Similarity
      98.9%
    • Coverage
      24.38%
    • Alignment (schematic)

      SEQ ID NO 5
      24.38% cov
      GQ258350
      30.91% cov
    • Alignment Length
      1,643 bp
  • Cloning vector pRama-34

    Cloning vector pRama-34

    • Public DB hit
      GI:254575546
      GQ258349
    • Hit length
      8,361 bp
    • E Value
      0E0
    • BLAST Score
      2,931.8 bits
    • Similarity
      98.9%
    • Coverage
      24.38%
    • Alignment (schematic)

      SEQ ID NO 5
      24.38% cov
      GQ258349
      19.64% cov
    • Alignment Length
      1,643 bp
  • Cloning vector pRama-31

    Cloning vector pRama-31

    • Public DB hit
      GI:254575543
      GQ258348
    • Hit length
      4,828 bp
    • E Value
      0E0
    • BLAST Score
      2,931.8 bits
    • Similarity
      98.9%
    • Coverage
      24.38%
    • Alignment (schematic)

      SEQ ID NO 5
      24.38% cov
      GQ258348
      34.01% cov
    • Alignment Length
      1,643 bp
  • Expression vector pGA1

    Expression vector pGA1

    • Public DB hit
      GI:16930600
      AF425297
    • Hit length
      3,898 bp
    • E Value
      0E0
    • BLAST Score
      2,931.8 bits
    • Similarity
      98.9%
    • Coverage
      24.38%
    • Alignment (schematic)

      SEQ ID NO 5
      24.38% cov
      AF425297
      42.12% cov
    • Alignment Length
      1,643 bp
  • Expression vector AF286076

    Expression vector AF286076

    • Public DB hit
      GI:12034709
      AF286076
    • Hit length
      5,130 bp
    • E Value
      0E0
    • BLAST Score
      2,929.9 bits
    • Similarity
      98.96%
    • Coverage
      24.36%
    • Alignment (schematic)

      SEQ ID NO 5
      24.36% cov
      AF286076
      31.89% cov
    • Alignment Length
      1,640 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:16798502
      AF430344
      1 of 2 hits reported for synthetic construct.
    • Hit length
      9,918 bp
    • E Value
      0E0
    • BLAST Score
      2,928.1 bits
    • Similarity
      98.96%
    • Coverage
      24.36%
    • Alignment (schematic)

      SEQ ID NO 5
      24.36% cov
      AF430344
      16.48% cov
    • Alignment Length
      1,639 bp
  • Cloning vector pCMVLacI

    Cloning vector pCMVLacI

    • Public DB hit
      GI:1515453
      U64448
    • Hit length
      7,995 bp
    • E Value
      0E0
    • BLAST Score
      2,922.5 bits
    • Similarity
      98.73%
    • Coverage
      24.49%
    • Alignment (schematic)

      SEQ ID NO 5
      24.49% cov
      U64448
      20.56% cov
    • Alignment Length
      1,649 bp
Occurrence
25 times in PatSeqDB
Tools
SEQ ID NO
6
Length
6,887
Sequence Type
DNA
Locations
Undetermined
Declared organism
Artificial
Determined organism
  • Zaire ebolavirus

    Zaire ebolavirus

    • Public DB hit
      GI:2522270
      L11365
      1 of 12 hits reported for Zaire ebolavirus.
    • Hit length
      11,742 bp
    • E Value
      0E0
    • BLAST Score
      3,129.3 bits
    • Similarity
      100%
    • Coverage
      24.6%
    • Alignment (schematic)

      SEQ ID NO 6
      24.6% cov
      L11365
      14.43% cov
    • Alignment Length
      1,694 bp
    • CIGAR string
      1928H1694M3265H mismatches: 0 - insertions: 0 - deletions: 0
  • 1976

    1976

    • Public DB hit
      GI:10141003
      AF086833
    • Hit length
      18,959 bp
    • E Value
      0E0
    • BLAST Score
      3,122 bits
    • Similarity
      99.94%
    • Coverage
      24.6%
    • Alignment (schematic)

      SEQ ID NO 6
      24.6% cov
      AF086833
      8.93% cov
    • Alignment Length
      1,694 bp
    • CIGAR string
      1928H889MD804M3265H mismatches: 0 - insertions: 0 - deletions: 1
  • Human herpesvirus 5

    Human herpesvirus 5

    • Public DB hit
      GI:239909366
      GQ121041
      1 of 7 hits reported for Human herpesvirus 5.
    • Hit length
      238,311 bp
    • E Value
      0E0
    • BLAST Score
      2,965 bits
    • Similarity
      99.15%
    • Coverage
      23.91%
    • Alignment (schematic)

      SEQ ID NO 6
      23.91% cov
      GQ121041
      0.69% cov
    • Alignment Length
      1,648 bp
  • Expression vector pGA3

    Expression vector pGA3

    • Public DB hit
      GI:16930604
      AF425299
    • Hit length
      3,893 bp
    • E Value
      0E0
    • BLAST Score
      2,953.9 bits
    • Similarity
      99.21%
    • Coverage
      23.78%
    • Alignment (schematic)

      SEQ ID NO 6
      23.78% cov
      AF425299
      42.08% cov
    • Alignment Length
      1,639 bp
  • Cloning vector pRama-35

    Cloning vector pRama-35

    • Public DB hit
      GI:254575550
      GQ258350
    • Hit length
      5,312 bp
    • E Value
      0E0
    • BLAST Score
      2,931.8 bits
    • Similarity
      98.9%
    • Coverage
      23.8%
    • Alignment (schematic)

      SEQ ID NO 6
      23.8% cov
      GQ258350
      30.91% cov
    • Alignment Length
      1,643 bp
  • Cloning vector pRama-34

    Cloning vector pRama-34

    • Public DB hit
      GI:254575546
      GQ258349
    • Hit length
      8,361 bp
    • E Value
      0E0
    • BLAST Score
      2,931.8 bits
    • Similarity
      98.9%
    • Coverage
      23.8%
    • Alignment (schematic)

      SEQ ID NO 6
      23.8% cov
      GQ258349
      19.64% cov
    • Alignment Length
      1,643 bp
  • Cloning vector pRama-31

    Cloning vector pRama-31

    • Public DB hit
      GI:254575543
      GQ258348
    • Hit length
      4,828 bp
    • E Value
      0E0
    • BLAST Score
      2,931.8 bits
    • Similarity
      98.9%
    • Coverage
      23.8%
    • Alignment (schematic)

      SEQ ID NO 6
      23.8% cov
      GQ258348
      34.01% cov
    • Alignment Length
      1,643 bp
  • Expression vector pGA1

    Expression vector pGA1

    • Public DB hit
      GI:16930600
      AF425297
    • Hit length
      3,898 bp
    • E Value
      0E0
    • BLAST Score
      2,931.8 bits
    • Similarity
      98.9%
    • Coverage
      23.8%
    • Alignment (schematic)

      SEQ ID NO 6
      23.8% cov
      AF425297
      42.12% cov
    • Alignment Length
      1,643 bp
Occurrence
25 times in PatSeqDB
Tools
SEQ ID NO
7
Length
7,044
Sequence Type
DNA
Locations
Undetermined
Declared organism
Artificial
Determined organism
  • Zaire ebolavirus

    Zaire ebolavirus

    • Public DB hit
      GI:2522270
      L11365
      1 of 24 hits reported for Zaire ebolavirus.
    • Hit length
      11,742 bp
    • E Value
      0E0
    • BLAST Score
      3,419.3 bits
    • Similarity
      100%
    • Coverage
      26.28%
    • Alignment (schematic)

      SEQ ID NO 7
      26.28% cov
      L11365
      15.76% cov
    • Alignment Length
      1,851 bp
    • CIGAR string
      1928H1851M3265H mismatches: 0 - insertions: 0 - deletions: 0
  • 1976

    1976

    • Public DB hit
      GI:10141003
      AF086833
    • Hit length
      18,959 bp
    • E Value
      0E0
    • BLAST Score
      3,411.9 bits
    • Similarity
      99.95%
    • Coverage
      26.28%
    • Alignment (schematic)

      SEQ ID NO 7
      26.28% cov
      AF086833
      9.76% cov
    • Alignment Length
      1,851 bp
    • CIGAR string
      1928H896MD954M3265H mismatches: 0 - insertions: 0 - deletions: 1
Occurrence
25 times in PatSeqDB
Tools
SEQ ID NO
8
Length
7,106
Sequence Type
DNA
Locations
Undetermined
Declared organism
Artificial
Determined organism
  • Human herpesvirus 5

    Human herpesvirus 5

    • Public DB hit
      GI:239909366
      GQ121041
      1 of 8 hits reported for Human herpesvirus 5.
    • Hit length
      238,311 bp
    • E Value
      0E0
    • BLAST Score
      2,965 bits
    • Similarity
      99.15%
    • Coverage
      23.18%
    • Alignment (schematic)

      SEQ ID NO 8
      23.18% cov
      GQ121041
      0.69% cov
    • Alignment Length
      1,648 bp
    • CIGAR string
      235H31MN38MN2MN271MN65MN75MN114MN3MN7MN780MDMI17MN223MNMN6M5224H mismatches: 12 - insertions: 1 - deletions: 1
  • Expression vector pGA3

    Expression vector pGA3

    • Public DB hit
      GI:16930604
      AF425299
    • Hit length
      3,893 bp
    • E Value
      0E0
    • BLAST Score
      2,953.9 bits
    • Similarity
      99.21%
    • Coverage
      23.05%
    • Alignment (schematic)

      SEQ ID NO 8
      23.05% cov
      AF425299
      42.08% cov
    • Alignment Length
      1,639 bp
  • Cloning vector pRama-35

    Cloning vector pRama-35

    • Public DB hit
      GI:254575550
      GQ258350
    • Hit length
      5,312 bp
    • E Value
      0E0
    • BLAST Score
      2,931.8 bits
    • Similarity
      98.9%
    • Coverage
      23.07%
    • Alignment (schematic)

      SEQ ID NO 8
      23.07% cov
      GQ258350
      30.91% cov
    • Alignment Length
      1,643 bp
  • Cloning vector pRama-34

    Cloning vector pRama-34

    • Public DB hit
      GI:254575546
      GQ258349
    • Hit length
      8,361 bp
    • E Value
      0E0
    • BLAST Score
      2,931.8 bits
    • Similarity
      98.9%
    • Coverage
      23.07%
    • Alignment (schematic)

      SEQ ID NO 8
      23.07% cov
      GQ258349
      19.64% cov
    • Alignment Length
      1,643 bp
  • Cloning vector pRama-31

    Cloning vector pRama-31

    • Public DB hit
      GI:254575543
      GQ258348
    • Hit length
      4,828 bp
    • E Value
      0E0
    • BLAST Score
      2,931.8 bits
    • Similarity
      98.9%
    • Coverage
      23.07%
    • Alignment (schematic)

      SEQ ID NO 8
      23.07% cov
      GQ258348
      34.01% cov
    • Alignment Length
      1,643 bp
  • Expression vector pGA1

    Expression vector pGA1

    • Public DB hit
      GI:16930600
      AF425297
    • Hit length
      3,898 bp
    • E Value
      0E0
    • BLAST Score
      2,931.8 bits
    • Similarity
      98.9%
    • Coverage
      23.07%
    • Alignment (schematic)

      SEQ ID NO 8
      23.07% cov
      AF425297
      42.12% cov
    • Alignment Length
      1,643 bp
  • Expression vector AF286076

    Expression vector AF286076

    • Public DB hit
      GI:12034709
      AF286076
    • Hit length
      5,130 bp
    • E Value
      0E0
    • BLAST Score
      2,929.9 bits
    • Similarity
      98.96%
    • Coverage
      23.05%
    • Alignment (schematic)

      SEQ ID NO 8
      23.05% cov
      AF286076
      31.89% cov
    • Alignment Length
      1,640 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:16798502
      AF430344
      1 of 2 hits reported for synthetic construct.
    • Hit length
      9,918 bp
    • E Value
      0E0
    • BLAST Score
      2,928.1 bits
    • Similarity
      98.96%
    • Coverage
      23.05%
    • Alignment (schematic)

      SEQ ID NO 8
      23.05% cov
      AF430344
      16.48% cov
    • Alignment Length
      1,639 bp
  • Cloning vector pCMVLacI

    Cloning vector pCMVLacI

    • Public DB hit
      GI:1515453
      U64448
    • Hit length
      7,995 bp
    • E Value
      0E0
    • BLAST Score
      2,922.5 bits
    • Similarity
      98.73%
    • Coverage
      23.18%
    • Alignment (schematic)

      SEQ ID NO 8
      23.18% cov
      U64448
      20.56% cov
    • Alignment Length
      1,649 bp
  • Zaire ebolavirus

    Zaire ebolavirus

    • Public DB hit
      GI:2522270
      L11365
      1 of 7 hits reported for Zaire ebolavirus.
    • Hit length
      11,742 bp
    • E Value
      0E0
    • BLAST Score
      2,918.8 bits
    • Similarity
      100%
    • Coverage
      22.23%
    • Alignment (schematic)

      SEQ ID NO 8
      22.23% cov
      L11365
      13.46% cov
    • Alignment Length
      1,580 bp
  • 1976

    1976

    • Public DB hit
      GI:10141003
      AF086833
    • Hit length
      18,959 bp
    • E Value
      0E0
    • BLAST Score
      2,911.4 bits
    • Similarity
      99.94%
    • Coverage
      22.23%
    • Alignment (schematic)

      SEQ ID NO 8
      22.23% cov
      AF086833
      8.33% cov
    • Alignment Length
      1,580 bp
Occurrence
25 times in PatSeqDB
Tools
SEQ ID NO
9
Length
6,914
Sequence Type
DNA
Locations
Undetermined
Declared organism
Artificial
Determined organism
  • Zaire ebolavirus

    Zaire ebolavirus

    • Public DB hit
      GI:2522270
      L11365
      1 of 24 hits reported for Zaire ebolavirus.
    • Hit length
      11,742 bp
    • E Value
      0E0
    • BLAST Score
      3,629.8 bits
    • Similarity
      100%
    • Coverage
      28.42%
    • Alignment (schematic)

      SEQ ID NO 9
      28.42% cov
      L11365
      16.73% cov
    • Alignment Length
      1,965 bp
    • CIGAR string
      1928H1965M3021H mismatches: 0 - insertions: 0 - deletions: 0
  • 1976

    1976

    • Public DB hit
      GI:10141003
      AF086833
    • Hit length
      18,959 bp
    • E Value
      0E0
    • BLAST Score
      3,622.4 bits
    • Similarity
      99.95%
    • Coverage
      28.42%
    • Alignment (schematic)

      SEQ ID NO 9
      28.42% cov
      AF086833
      10.36% cov
    • Alignment Length
      1,965 bp
    • CIGAR string
      1928H896MD1068M3021H mismatches: 0 - insertions: 0 - deletions: 1
Occurrence
25 times in PatSeqDB
Tools
SEQ ID NO
10
Length
6,467
Sequence Type
DNA
Locations
Undetermined
Declared organism
Artificial
Determined organism
  • Human herpesvirus 5

    Human herpesvirus 5

    • Public DB hit
      GI:239909366
      GQ121041
      1 of 16 hits reported for Human herpesvirus 5.
    • Hit length
      238,311 bp
    • E Value
      0E0
    • BLAST Score
      2,965 bits
    • Similarity
      99.15%
    • Coverage
      25.47%
    • Alignment (schematic)

      SEQ ID NO 10
      25.47% cov
      GQ121041
      0.69% cov
    • Alignment Length
      1,648 bp
    • CIGAR string
      235H31MN38MN2MN271MN65MN75MN114MN3MN7MN780MDMI17MN223MNMN6M4585H mismatches: 12 - insertions: 1 - deletions: 1
  • Expression vector pGA3

    Expression vector pGA3

    • Public DB hit
      GI:16930604
      AF425299
    • Hit length
      3,893 bp
    • E Value
      0E0
    • BLAST Score
      2,953.9 bits
    • Similarity
      99.21%
    • Coverage
      25.33%
    • Alignment (schematic)

      SEQ ID NO 10
      25.33% cov
      AF425299
      42.08% cov
    • Alignment Length
      1,639 bp
  • Cloning vector pRama-35

    Cloning vector pRama-35

    • Public DB hit
      GI:254575550
      GQ258350
    • Hit length
      5,312 bp
    • E Value
      0E0
    • BLAST Score
      2,931.8 bits
    • Similarity
      98.9%
    • Coverage
      25.34%
    • Alignment (schematic)

      SEQ ID NO 10
      25.34% cov
      GQ258350
      30.91% cov
    • Alignment Length
      1,643 bp
  • Cloning vector pRama-34

    Cloning vector pRama-34

    • Public DB hit
      GI:254575546
      GQ258349
    • Hit length
      8,361 bp
    • E Value
      0E0
    • BLAST Score
      2,931.8 bits
    • Similarity
      98.9%
    • Coverage
      25.34%
    • Alignment (schematic)

      SEQ ID NO 10
      25.34% cov
      GQ258349
      19.64% cov
    • Alignment Length
      1,643 bp
  • Cloning vector pRama-31

    Cloning vector pRama-31

    • Public DB hit
      GI:254575543
      GQ258348
    • Hit length
      4,828 bp
    • E Value
      0E0
    • BLAST Score
      2,931.8 bits
    • Similarity
      98.9%
    • Coverage
      25.34%
    • Alignment (schematic)

      SEQ ID NO 10
      25.34% cov
      GQ258348
      34.01% cov
    • Alignment Length
      1,643 bp
  • Expression vector pGA1

    Expression vector pGA1

    • Public DB hit
      GI:16930600
      AF425297
    • Hit length
      3,898 bp
    • E Value
      0E0
    • BLAST Score
      2,931.8 bits
    • Similarity
      98.9%
    • Coverage
      25.34%
    • Alignment (schematic)

      SEQ ID NO 10
      25.34% cov
      AF425297
      42.12% cov
    • Alignment Length
      1,643 bp
  • Expression vector AF286076

    Expression vector AF286076

    • Public DB hit
      GI:12034709
      AF286076
    • Hit length
      5,130 bp
    • E Value
      0E0
    • BLAST Score
      2,929.9 bits
    • Similarity
      98.96%
    • Coverage
      25.33%
    • Alignment (schematic)

      SEQ ID NO 10
      25.33% cov
      AF286076
      31.89% cov
    • Alignment Length
      1,640 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:16798502
      AF430344
      1 of 2 hits reported for synthetic construct.
    • Hit length
      9,918 bp
    • E Value
      0E0
    • BLAST Score
      2,928.1 bits
    • Similarity
      98.96%
    • Coverage
      25.33%
    • Alignment (schematic)

      SEQ ID NO 10
      25.33% cov
      AF430344
      16.48% cov
    • Alignment Length
      1,639 bp
  • Cloning vector pCMVLacI

    Cloning vector pCMVLacI

    • Public DB hit
      GI:1515453
      U64448
    • Hit length
      7,995 bp
    • E Value
      0E0
    • BLAST Score
      2,922.5 bits
    • Similarity
      98.73%
    • Coverage
      25.47%
    • Alignment (schematic)

      SEQ ID NO 10
      25.47% cov
      U64448
      20.56% cov
    • Alignment Length
      1,649 bp
Occurrence
25 times in PatSeqDB
Tools

Feedback