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Search for Biological Sequences disclosed in Patents

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Data obtained from: NCBI GenBank USPTO Fulltext EMBL-EBI Pat
41 sequences found in this patent (in total)

Displaying 1 - 10 of 41 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
22
Type
peptide
Locations
Detailed Description, Summary

Declared organism:
Artificial

Determined organism:
Occurrence
10 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
18
Type
peptide
Locations
Detailed Description, Summary

Declared organism:
Artificial

Determined organism:
Occurrence
67 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
3
Length
19
Type
peptide
Locations
Detailed Description, Summary

Declared organism:
Artificial

Determined organism:
  • Clostridium tetani

    Clostridium tetani

    • Public DB hit
      GI:15022165
      AAK72964
    • Hit length
      1,310 aa
    • E Value
      3.45E0
    • BLAST Score
      35.4 bits
    • Similarity
      95%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      AAK72964
      1.53% cov
    • Alignment Length
      20 aa
    • CIGAR string
      11MI8M mismatches: 0 - insertions: 1 - deletions: 0
  • Clostridium tetani E88

    Clostridium tetani E88

    • Public DB hit
      GI:28373188
      NP_783831
    • Hit length
      1,315 aa
    • E Value
      3.54E0
    • BLAST Score
      35.4 bits
    • Similarity
      95%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NP_783831
      1.52% cov
    • Alignment Length
      20 aa
    • CIGAR string
      11MI8M mismatches: 0 - insertions: 1 - deletions: 0
Occurrence
61 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
4
Length
17
Type
peptide
Locations
Detailed Description, Summary

Declared organism:
Artificial

Determined organism:
  • Clostridium sp. RKD

    Clostridium sp. RKD

    • Public DB hit
      GI:73853051
      CAJ28911
      1 of 2 hits reported for Clostridium sp. RKD.
    • Hit length
      257 aa
    • E Value
      1.15E0
    • BLAST Score
      37 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      CAJ28911
      6.61% cov
    • Alignment Length
      17 aa
    • CIGAR string
      13MN3M mismatches: 1 - insertions: 0 - deletions: 0
  • Clostridium tetani

    Clostridium tetani

    • Public DB hit
      GI:8132375
      AAF73267
      1 of 11 hits reported for Clostridium tetani.
    • Hit length
      451 aa
    • E Value
      1.58E0
    • BLAST Score
      36.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      AAF73267
      3.77% cov
    • Alignment Length
      17 aa
    • CIGAR string
      13MN3M mismatches: 1 - insertions: 0 - deletions: 0
  • Clostridium tetani E88

    Clostridium tetani E88

    • Public DB hit
      GI:28373188
      NP_783831
    • Hit length
      1,315 aa
    • E Value
      2.07E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NP_783831
      1.29% cov
    • Alignment Length
      17 aa
Occurrence
59 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
5
Length
15
Type
peptide
Locations
Detailed Description, Summary

Declared organism:
Artificial

Determined organism:
  • Clostridium tetani

    Clostridium tetani

    • Public DB hit
      GI:144921
      AAA23282
      1 of 2 hits reported for Clostridium tetani.
    • Hit length
      573 aa
    • E Value
      6.85E0
    • BLAST Score
      33.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      AAA23282
      2.62% cov
    • Alignment Length
      15 aa
    • CIGAR string
      15M mismatches: 0 - insertions: 0 - deletions: 0
  • Clostridium tetani E88

    Clostridium tetani E88

    • Public DB hit
      GI:28373188
      NP_783831
    • Hit length
      1,315 aa
    • E Value
      7.58E0
    • BLAST Score
      33.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NP_783831
      1.14% cov
    • Alignment Length
      15 aa
    • CIGAR string
      15M mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
1125 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
6
Length
21
Type
peptide
Locations
Detailed Description, Summary

Declared organism:
Artificial

Determined organism:
  • Clostridium tetani

    Clostridium tetani

    • Public DB hit
      GI:15022165
      AAK72964
      1 of 11 hits reported for Clostridium tetani.
    • Hit length
      1,310 aa
    • E Value
      4.17E-4
    • BLAST Score
      48.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      AAK72964
      1.6% cov
    • Alignment Length
      21 aa
    • CIGAR string
      21M mismatches: 0 - insertions: 0 - deletions: 0
  • Clostridium tetani E88

    Clostridium tetani E88

    • Public DB hit
      GI:28373188
      NP_783831
    • Hit length
      1,315 aa
    • E Value
      4.28E-4
    • BLAST Score
      48.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NP_783831
      1.6% cov
    • Alignment Length
      21 aa
    • CIGAR string
      21M mismatches: 0 - insertions: 0 - deletions: 0
  • Clostridium sp. RKD

    Clostridium sp. RKD

    • Public DB hit
      GI:76150422
      CAJ30283
      1 of 2 hits reported for Clostridium sp. RKD.
    • Hit length
      256 aa
    • E Value
      1.72E-3
    • BLAST Score
      46.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      CAJ30283
      8.2% cov
    • Alignment Length
      21 aa
Occurrence
1084 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
7
Length
15
Type
peptide
Locations
Detailed Description, Summary

Declared organism:
Artificial

Determined organism:
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:115529875
      ABJ09651
      1 of 4 hits reported for synthetic construct.
    • Hit length
      141 aa
    • E Value
      6.79E-5
    • BLAST Score
      50.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      ABJ09651
      10.64% cov
    • Alignment Length
      15 aa
    • CIGAR string
      15M mismatches: 0 - insertions: 0 - deletions: 0
  • Measles virus

    Measles virus

    • Public DB hit
      GI:6049641
      AAF02698
      1 of 14 hits reported for Measles virus.
    • Hit length
      579 aa
    • E Value
      5.13E-4
    • BLAST Score
      47.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      AAF02698
      2.59% cov
    • Alignment Length
      15 aa
  • Rinderpest virus

    Rinderpest virus

    • Public DB hit
      GI:14531022
      AAK63190
      1 of 2 hits reported for Rinderpest virus.
    • Hit length
      546 aa
    • E Value
      6.51E-4
    • BLAST Score
      46.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      AAK63190
      2.75% cov
    • Alignment Length
      15 aa
  • Measles virus strain AIK-C

    Measles virus strain AIK-C

    • Public DB hit
      GI:9181870
      AAF85664
    • Hit length
      553 aa
    • E Value
      7.97E-4
    • BLAST Score
      46.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      AAF85664
      2.71% cov
    • Alignment Length
      15 aa
  • Rinderpest virus (strain rbt1)

    Rinderpest virus (strain rbt1)

    • Public DB hit
      GI:731112
      P41360
    • Hit length
      546 aa
    • E Value
      8.65E-4
    • BLAST Score
      46.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      P41360
      2.75% cov
    • Alignment Length
      15 aa
  • Rinderpest virus (strain Kabete O)

    Rinderpest virus (strain Kabete O)

    • Public DB hit
      GI:56410434
      YP_087124
    • Hit length
      546 aa
    • E Value
      3.73E-3
    • BLAST Score
      44.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      YP_087124
      2.75% cov
    • Alignment Length
      15 aa
  • Rinderpest virus (strain RBOK)

    Rinderpest virus (strain RBOK)

    • Public DB hit
      GI:731113
      P41356
    • Hit length
      546 aa
    • E Value
      3.73E-3
    • BLAST Score
      44.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      P41356
      2.75% cov
    • Alignment Length
      15 aa
Occurrence
415 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
8
Length
15
Type
peptide
Locations
Detailed Description, Summary

Declared organism:
Artificial

Determined organism:
  • Hepatitis B virus

    Hepatitis B virus

    • Public DB hit
      GI:86515876
      ABC97585
      1 of 25 hits reported for Hepatitis B virus.
    • Hit length
      138 aa
    • E Value
      6.02E0
    • BLAST Score
      33.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      ABC97585
      10.87% cov
    • Alignment Length
      15 aa
    • CIGAR string
      15M mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
61 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
9
Length
20
Type
peptide
Locations
Detailed Description, Summary

Declared organism:
Artificial

Determined organism:
Occurrence
60 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
10
Length
4
Type
peptide
Locations
Claims, Detailed Description, Summary

Declared organism:
Artificial

Occurrence
185 times in PatSeqDB
Tools
PatSeq Finder

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