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Search for Biological Sequences disclosed in Patents

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Data obtained from: DDBJ Pat NCBI GenBank USPTO Fulltext EMBL-EBI Pat
389 sequences found in this patent (in total)

Displaying 1 - 10 of 389 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
20
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:187960074
      NG_007666
      1 of 9 hits reported for Homo sapiens.
    • Hit length
      10,309 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      NG_007666
      0.19% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332835465
      XM_003312846
      1 of 4 hits reported for Pan troglodytes.
    • Hit length
      992 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XM_003312846
      2.02% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332264654
      XR_123255
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      1,097 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XR_123255
      1.82% cov
    • Alignment Length
      20 bp
  • Propithecus coquereli

    Propithecus coquereli

    • Public DB hit
      GI:187609538
      EU605940
    • Hit length
      760 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      EU605940
      2.63% cov
    • Alignment Length
      20 bp
  • Varecia rubra

    Varecia rubra

    • Public DB hit
      GI:187609536
      EU605939
    • Hit length
      760 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      EU605939
      2.63% cov
    • Alignment Length
      20 bp
  • Varecia variegata variegata

    Varecia variegata variegata

    • Public DB hit
      GI:187609534
      EU605938
    • Hit length
      760 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      EU605938
      2.63% cov
    • Alignment Length
      20 bp
  • Nycticebus coucang

    Nycticebus coucang

    • Public DB hit
      GI:187609532
      EU605937
    • Hit length
      760 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      EU605937
      2.63% cov
    • Alignment Length
      20 bp
  • Eulemur macaco macaco

    Eulemur macaco macaco

    • Public DB hit
      GI:187609530
      EU605936
    • Hit length
      760 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      EU605936
      2.63% cov
    • Alignment Length
      20 bp
  • Eulemur flavifrons

    Eulemur flavifrons

    • Public DB hit
      GI:187609528
      EU605935
    • Hit length
      760 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      EU605935
      2.63% cov
    • Alignment Length
      20 bp
  • Eulemur mongoz

    Eulemur mongoz

    • Public DB hit
      GI:187609526
      EU605934
    • Hit length
      760 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      EU605934
      2.63% cov
    • Alignment Length
      20 bp
  • Eulemur rufus

    Eulemur rufus

    • Public DB hit
      GI:187609524
      EU605933
    • Hit length
      760 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      EU605933
      2.63% cov
    • Alignment Length
      20 bp
  • Eulemur albifrons

    Eulemur albifrons

    • Public DB hit
      GI:187609522
      EU605932
    • Hit length
      760 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      EU605932
      2.63% cov
    • Alignment Length
      20 bp
  • Cheirogaleus medius

    Cheirogaleus medius

    • Public DB hit
      GI:187609520
      EU605931
    • Hit length
      760 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      EU605931
      2.63% cov
    • Alignment Length
      20 bp
Occurrence
1578 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
20
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:142380030
      NM_029780
      1 of 14 hits reported for Mus musculus.
    • Hit length
      3,066 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NM_029780
      0.65% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:40254798
      NM_012639
      1 of 4 hits reported for Rattus norvegicus.
    • Hit length
      2,970 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NM_012639
      0.67% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Moloney murine sarcoma virus

    Moloney murine sarcoma virus

    • Public DB hit
      GI:332206
      K01691
      1 of 2 hits reported for Moloney murine sarcoma virus.
    • Hit length
      1,514 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      K01691
      1.32% cov
    • Alignment Length
      20 bp
Occurrence
1461 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
3
Length
3,247
Type
nucleotide
Locations
Claims, Detailed Description

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:190741
      M31724
      1 of 5 hits reported for Homo sapiens.
    • Hit length
      3,247 bp
    • E Value
      0E0
    • BLAST Score
      5,997.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      M31724
      100% cov
    • Alignment Length
      3,247 bp
    • CIGAR string
      3247M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332858773
      XM_525354
    • Hit length
      3,884 bp
    • E Value
      0E0
    • BLAST Score
      5,819.9 bits
    • Similarity
      99.02%
    • Coverage
      99.94%
    • Alignment (schematic)

      SEQ ID NO 3
      99.94% cov
      XM_525354
      83.68% cov
    • Alignment Length
      3,252 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:197101066
      NM_001131782
    • Hit length
      3,287 bp
    • E Value
      0E0
    • BLAST Score
      5,589.1 bits
    • Similarity
      97.78%
    • Coverage
      99.82%
    • Alignment (schematic)

      SEQ ID NO 3
      99.82% cov
      NM_001131782
      98.66% cov
    • Alignment Length
      3,248 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297259579
      XM_001096053
    • Hit length
      3,465 bp
    • E Value
      0E0
    • BLAST Score
      5,450.6 bits
    • Similarity
      96.99%
    • Coverage
      99.94%
    • Alignment (schematic)

      SEQ ID NO 3
      99.94% cov
      XM_001096053
      93.65% cov
    • Alignment Length
      3,254 bp
Occurrence
66 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
4
Length
21
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:237858755
      NG_012119
      1 of 7 hits reported for Homo sapiens.
    • Hit length
      81,198 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NG_012119
      0.03% cov
    • Alignment Length
      21 bp
    • CIGAR string
      21M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332858773
      XM_525354
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      3,884 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XM_525354
      0.54% cov
    • Alignment Length
      21 bp
    • CIGAR string
      21M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332208791
      XM_003253445
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      2,262 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XM_003253445
      0.93% cov
    • Alignment Length
      21 bp
    • CIGAR string
      21M mismatches: 0 - insertions: 0 - deletions: 0
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301754376
      XM_002912980
      1 of 2 hits reported for Ailuropoda melanoleuca.
    • Hit length
      1,300 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XM_002912980
      1.62% cov
    • Alignment Length
      21 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297259579
      XM_001096053
      1 of 2 hits reported for Macaca mulatta.
    • Hit length
      3,465 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XM_001096053
      0.61% cov
    • Alignment Length
      21 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296200697
      XM_002747667
      1 of 2 hits reported for Callithrix jacchus.
    • Hit length
      1,751 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XM_002747667
      1.2% cov
    • Alignment Length
      21 bp
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:224593279
      NM_001113435
      1 of 2 hits reported for Sus scrofa.
    • Hit length
      3,454 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NM_001113435
      0.61% cov
    • Alignment Length
      21 bp
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:73992580
      XM_534455
      1 of 2 hits reported for Canis lupus familiaris.
    • Hit length
      1,498 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XM_534455
      1.4% cov
    • Alignment Length
      21 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:197101066
      NM_001131782
    • Hit length
      3,287 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NM_001131782
      0.64% cov
    • Alignment Length
      21 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:168278057
      AB385151
      1 of 2 hits reported for synthetic construct.
    • Hit length
      1,322 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      AB385151
      1.59% cov
    • Alignment Length
      21 bp
  • Macaca fascicularis

    Macaca fascicularis

    • Public DB hit
      GI:90080941
      AB172890
    • Hit length
      1,974 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      AB172890
      1.06% cov
    • Alignment Length
      21 bp
Occurrence
47 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
5
Length
21
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:237858755
      NG_012119
      1 of 9 hits reported for Homo sapiens.
    • Hit length
      81,198 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NG_012119
      0.03% cov
    • Alignment Length
      21 bp
    • CIGAR string
      21M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332858773
      XM_525354
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      3,884 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XM_525354
      0.54% cov
    • Alignment Length
      21 bp
    • CIGAR string
      21M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332208791
      XM_003253445
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      2,262 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XM_003253445
      0.93% cov
    • Alignment Length
      21 bp
    • CIGAR string
      21M mismatches: 0 - insertions: 0 - deletions: 0
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301754376
      XM_002912980
      1 of 2 hits reported for Ailuropoda melanoleuca.
    • Hit length
      1,300 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XM_002912980
      1.62% cov
    • Alignment Length
      21 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297259579
      XM_001096053
      1 of 2 hits reported for Macaca mulatta.
    • Hit length
      3,465 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XM_001096053
      0.61% cov
    • Alignment Length
      21 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296200697
      XM_002747667
      1 of 2 hits reported for Callithrix jacchus.
    • Hit length
      1,751 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XM_002747667
      1.2% cov
    • Alignment Length
      21 bp
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:149734185
      XM_001488269
      1 of 2 hits reported for Equus caballus.
    • Hit length
      1,323 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XM_001488269
      1.59% cov
    • Alignment Length
      21 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:197101066
      NM_001131782
    • Hit length
      3,287 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NM_001131782
      0.64% cov
    • Alignment Length
      21 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:168278057
      AB385151
      1 of 2 hits reported for synthetic construct.
    • Hit length
      1,322 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      AB385151
      1.59% cov
    • Alignment Length
      21 bp
  • Macaca fascicularis

    Macaca fascicularis

    • Public DB hit
      GI:90080941
      AB172890
    • Hit length
      1,974 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      AB172890
      1.06% cov
    • Alignment Length
      21 bp
Occurrence
47 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
6
Length
24
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332858773
      XM_525354
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      3,884 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_525354
      0.62% cov
    • Alignment Length
      24 bp
    • CIGAR string
      24M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332208791
      XM_003253445
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      2,262 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_003253445
      1.06% cov
    • Alignment Length
      24 bp
    • CIGAR string
      24M mismatches: 0 - insertions: 0 - deletions: 0
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301754376
      XM_002912980
      1 of 2 hits reported for Ailuropoda melanoleuca.
    • Hit length
      1,300 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_002912980
      1.85% cov
    • Alignment Length
      24 bp
    • CIGAR string
      24M mismatches: 0 - insertions: 0 - deletions: 0
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297259579
      XM_001096053
      1 of 2 hits reported for Macaca mulatta.
    • Hit length
      3,465 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_001096053
      0.69% cov
    • Alignment Length
      24 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296200697
      XM_002747667
      1 of 2 hits reported for Callithrix jacchus.
    • Hit length
      1,751 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_002747667
      1.37% cov
    • Alignment Length
      24 bp
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:154152076
      NM_001100326
      1 of 2 hits reported for Bos taurus.
    • Hit length
      1,783 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NM_001100326
      1.35% cov
    • Alignment Length
      24 bp
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:18104977
      NM_002827
      1 of 6 hits reported for Homo sapiens.
    • Hit length
      3,318 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NM_002827
      0.72% cov
    • Alignment Length
      24 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:197101066
      NM_001131782
      1 of 2 hits reported for Pongo abelii.
    • Hit length
      3,287 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NM_001131782
      0.73% cov
    • Alignment Length
      24 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:168278057
      AB385151
      1 of 4 hits reported for synthetic construct.
    • Hit length
      1,322 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      AB385151
      1.82% cov
    • Alignment Length
      24 bp
  • Macaca fascicularis

    Macaca fascicularis

    • Public DB hit
      GI:90080941
      AB172890
    • Hit length
      1,974 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      AB172890
      1.22% cov
    • Alignment Length
      24 bp
Occurrence
47 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
7
Length
19
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:163954974
      NG_007073
    • Hit length
      10,880 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NG_007073
      0.17% cov
    • Alignment Length
      19 bp
    • CIGAR string
      19M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332860561
      XR_019963
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      1,220 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XR_019963
      1.56% cov
    • Alignment Length
      19 bp
    • CIGAR string
      19M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332249238
      XM_003273723
      1 of 3 hits reported for Nomascus leucogenys.
    • Hit length
      1,433 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XM_003273723
      1.33% cov
    • Alignment Length
      19 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:306482640
      NM_001195426
      1 of 4 hits reported for Macaca mulatta.
    • Hit length
      1,106 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NM_001195426
      1.72% cov
    • Alignment Length
      19 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297709813
      XR_095997
    • Hit length
      1,237 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XR_095997
      1.54% cov
    • Alignment Length
      19 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296235519
      XM_002762889
      1 of 14 hits reported for Callithrix jacchus.
    • Hit length
      1,146 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XM_002762889
      1.66% cov
    • Alignment Length
      19 bp
Occurrence
2414 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
8
Length
20
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:163954974
      NG_007073
    • Hit length
      10,880 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NG_007073
      0.18% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332860561
      XR_019963
      1 of 4 hits reported for Pan troglodytes.
    • Hit length
      1,220 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XR_019963
      1.64% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332249238
      XM_003273723
      1 of 5 hits reported for Nomascus leucogenys.
    • Hit length
      1,433 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XM_003273723
      1.4% cov
    • Alignment Length
      20 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297709736
      XR_095984
      1 of 5 hits reported for Pongo abelii.
    • Hit length
      1,239 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XR_095984
      1.61% cov
    • Alignment Length
      20 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297303688
      XR_010863
      1 of 2 hits reported for Macaca mulatta.
    • Hit length
      1,073 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XR_010863
      1.86% cov
    • Alignment Length
      20 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296238394
      XR_091313
      1 of 8 hits reported for Callithrix jacchus.
    • Hit length
      1,051 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XR_091313
      1.9% cov
    • Alignment Length
      20 bp
Occurrence
2570 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
9
Length
20
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:294610684
      NG_017077
      1 of 2 hits reported for Homo sapiens.
    • Hit length
      590,310 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      NG_017077
      0% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332838388
      XM_508955
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      1,422 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XM_508955
      1.41% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332249238
      XM_003273723
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      1,433 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XM_003273723
      1.4% cov
    • Alignment Length
      20 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297678549
      XR_093697
    • Hit length
      1,070 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XR_093697
      1.87% cov
    • Alignment Length
      20 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297303688
      XR_010863
      1 of 3 hits reported for Macaca mulatta.
    • Hit length
      1,073 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XR_010863
      1.86% cov
    • Alignment Length
      20 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296238891
      XR_091402
      1 of 15 hits reported for Callithrix jacchus.
    • Hit length
      888 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XR_091402
      2.25% cov
    • Alignment Length
      20 bp
Occurrence
1657 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
10
Length
4,127
Type
nucleotide
Locations
Detailed Description

Declared organism:
Rattus norvegicus

Determined organism:
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:206496
      M33962
    • Hit length
      4,127 bp
    • E Value
      0E0
    • BLAST Score
      7,622.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      M33962
      100% cov
    • Alignment Length
      4,127 bp
    • CIGAR string
      4127M mismatches: 0 - insertions: 0 - deletions: 0
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:133505844
      NM_011201
    • Hit length
      4,213 bp
    • E Value
      0E0
    • BLAST Score
      3,173.7 bits
    • Similarity
      85.26%
    • Coverage
      76.93%
    • Alignment (schematic)

      SEQ ID NO 10
      76.93% cov
      NM_011201
      74.58% cov
    • Alignment Length
      3,257 bp
Occurrence
116 times in PatSeqDB
Tools
PatSeq Finder

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