Polypeptide Having Function For Delaying Anthesis Or Suppressing Growth, Polynucleotide Encoding The Same, And Use Thereof

  • Published: Dec 29, 2011
  • Earliest Priority: Feb 23 2009
  • Family: 10
  • Cited Works: 6
  • Cited by: 0
  • Cites: 2
  • Sequences: 10
  • Additional Info: Cited Works Full text
Data obtained from: USPTO Fulltext
10 sequences found in this patent (in total)

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Download sequences in fasta format: 1 peptide 9 nucleotides

Displaying 1 - 10 of 10 sequences

SEQ ID NO
Length
Sequence Type
Locations
Declared organism
Determined organism
Occurrence
Tools
SEQ ID NO
1
Length
1,188
Sequence Type
nucleotide
Locations
Claims, Summary
Declared organism
Arabidopsis thaliana
Determined organism
  • Arabidopsis thaliana

    Arabidopsis thaliana

    • Public DB hit
      GI:145357878
      NM_121133
      1 of 7 hits reported for Arabidopsis thaliana.
    • Hit length
      1,574 bp
    • E Value
      0E0
    • BLAST Score
      2,178.3 bits
    • Similarity
      99.75%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      NM_121133
      75.48% cov
    • Alignment Length
      1,188 bp
    • CIGAR string
      897MN176M2N112M mismatches: 3 - insertions: 0 - deletions: 0
  • Arabidopsis lyrata subsp. lyrata

    Arabidopsis lyrata subsp. lyrata

    • Public DB hit
      GI:297811208
      XM_002873442
    • Hit length
      1,234 bp
    • E Value
      0E0
    • BLAST Score
      810 bits
    • Similarity
      83.81%
    • Coverage
      75.25%
    • Alignment (schematic)

      SEQ ID NO 1
      75.25% cov
      XM_002873442
      69.53% cov
    • Alignment Length
      902 bp
Occurrence
22 times in PatSeqDB
Tools
SEQ ID NO
2
Length
395
Sequence Type
peptide
Locations
Claims, Summary
Declared organism
Arabidopsis thaliana
Determined organism
  • Arabidopsis thaliana

    Arabidopsis thaliana

    • Public DB hit
      GI:15238906
      NP_196656
    • Hit length
      395 aa
    • E Value
      0E0
    • BLAST Score
      759.6 bits
    • Similarity
      99.49%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NP_196656
      100% cov
    • Alignment Length
      395 aa
    • CIGAR string
      32MN19MN342M mismatches: 2 - insertions: 0 - deletions: 0
  • Arabidopsis lyrata subsp. lyrata

    Arabidopsis lyrata subsp. lyrata

    • Public DB hit
      GI:297811209
      XP_002873488
    • Hit length
      397 aa
    • E Value
      4.76E-142
    • BLAST Score
      421.8 bits
    • Similarity
      77.6%
    • Coverage
      92.66%
    • Alignment (schematic)

      SEQ ID NO 2
      92.66% cov
      XP_002873488
      92.7% cov
    • Alignment Length
      384 aa
    • CIGAR string
      MN8MN3MN2MN2D12MN14MNMN2MN40MN10MN3MN9MN5MNMN5M2N2MNM2N9MN6MN26MN7M3N5M2N2M3N3M2N2M3NM9D2MNMN4MN3M2N2MN6M2N2M4N2M2D2NM2N2M2N2MNMI3N5MN4MN2MNMN4MN4IM2N2M2NMNM11I3M6N2MNMN3M2NM2N2M2N2M3D4MN2M2IMN4MNMNMN2MNMNMNM29H mismatches: 89 - insertions: 18 - deletions: 16
Occurrence
22 times in PatSeqDB
Tools
SEQ ID NO
3
Length
15
Sequence Type
nucleotide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
Occurrence
164 times in PatSeqDB
Tools
SEQ ID NO
4
Length
16
Sequence Type
nucleotide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
Occurrence
12 times in PatSeqDB
Tools
SEQ ID NO
5
Length
16
Sequence Type
nucleotide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
Occurrence
177 times in PatSeqDB
Tools
SEQ ID NO
6
Length
22
Sequence Type
nucleotide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
  • Overexpression vector pFC12860OE

    Overexpression vector pFC12860OE

    • Public DB hit
      GI:117583125
      DQ995487
    • Hit length
      9,217 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      DQ995487
      0.24% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Overexpression vector pFC12850OE

    Overexpression vector pFC12850OE

    • Public DB hit
      GI:117583122
      DQ995486
    • Hit length
      6,925 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      DQ995486
      0.32% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Overexpression vector pLE12860OE

    Overexpression vector pLE12860OE

    • Public DB hit
      GI:117583119
      DQ995485
    • Hit length
      7,284 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      DQ995485
      0.3% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Overexpression vector pFE12860OE

    Overexpression vector pFE12860OE

    • Public DB hit
      GI:117583116
      DQ995484
    • Hit length
      7,022 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      DQ995484
      0.31% cov
    • Alignment Length
      22 bp
  • Silencing vector p3UTR12850S

    Silencing vector p3UTR12850S

    • Public DB hit
      GI:117209781
      EF010980
    • Hit length
      7,145 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      EF010980
      0.31% cov
    • Alignment Length
      22 bp
  • Silencing vector pSE12860S

    Silencing vector pSE12860S

    • Public DB hit
      GI:117209778
      EF010979
    • Hit length
      6,268 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      EF010979
      0.35% cov
    • Alignment Length
      22 bp
  • Silencing vector pFE12860S

    Silencing vector pFE12860S

    • Public DB hit
      GI:117209775
      EF010978
    • Hit length
      6,158 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      EF010978
      0.36% cov
    • Alignment Length
      22 bp
  • Activation-tagging vector pEnLox

    Activation-tagging vector pEnLox

    • Public DB hit
      GI:106013229
      DQ645630
    • Hit length
      4,648 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      DQ645630
      0.47% cov
    • Alignment Length
      22 bp
  • Cloning Vector pKANNIFAD200

    Cloning Vector pKANNIFAD200

    • Public DB hit
      GI:94483518
      DQ462471
    • Hit length
      6,457 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      DQ462471
      0.34% cov
    • Alignment Length
      22 bp
  • Cloning Vector pKANNIFAD401

    Cloning Vector pKANNIFAD401

    • Public DB hit
      GI:94483516
      DQ462470
    • Hit length
      6,859 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      DQ462470
      0.32% cov
    • Alignment Length
      22 bp
  • Binary vector pGV4945

    Binary vector pGV4945

    • Public DB hit
      GI:22773774
      AY141042
    • Hit length
      6,595 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      AY141042
      0.33% cov
    • Alignment Length
      22 bp
  • Arabidopsis thaliana

    Arabidopsis thaliana

    • Public DB hit
      GI:14594801
      AJ298137
    • Hit length
      11,509 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      AJ298137
      0.19% cov
    • Alignment Length
      22 bp
  • Agrobacterium tumefaciens

    Agrobacterium tumefaciens

    • Public DB hit
      GI:8572673
      AF242881
      1 of 2 hits reported for Agrobacterium tumefaciens.
    • Hit length
      194,140 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      AF242881
      0.01% cov
    • Alignment Length
      22 bp
  • Activation-tagging vector pSKI015

    Activation-tagging vector pSKI015

    • Public DB hit
      GI:6537289
      AF187951
    • Hit length
      10,138 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      AF187951
      0.22% cov
    • Alignment Length
      22 bp
  • Gene trapping Ds/T-DNA vector pUR224NB

    Gene trapping Ds/T-DNA vector pUR224NB

    • Public DB hit
      GI:81238203
      DQ225747
    • Hit length
      22,828 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      DQ225747
      0.1% cov
    • Alignment Length
      22 bp
  • Gene trapping Ds/T-DNA vector pUR224NA

    Gene trapping Ds/T-DNA vector pUR224NA

    • Public DB hit
      GI:81238196
      DQ225746
    • Hit length
      22,828 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      DQ225746
      0.1% cov
    • Alignment Length
      22 bp
  • Cloning vector pHellsgate 8

    Cloning vector pHellsgate 8

    • Public DB hit
      GI:33320493
      AF489904
    • Hit length
      17,485 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      AF489904
      0.13% cov
    • Alignment Length
      22 bp
  • Binary vector pGV4939

    Binary vector pGV4939

    • Public DB hit
      GI:24850291
      AY147202
    • Hit length
      6,643 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      AY147202
      0.33% cov
    • Alignment Length
      22 bp
  • Binary vector pGV4223

    Binary vector pGV4223

    • Public DB hit
      GI:23381130
      AJ414111
    • Hit length
      5,582 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      AJ414111
      0.39% cov
    • Alignment Length
      22 bp
  • Binary vector pGV4128

    Binary vector pGV4128

    • Public DB hit
      GI:23381127
      AJ414110
    • Hit length
      5,439 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      AJ414110
      0.4% cov
    • Alignment Length
      22 bp
  • Binary vector pGV4126

    Binary vector pGV4126

    • Public DB hit
      GI:23381124
      AJ414109
    • Hit length
      5,341 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      AJ414109
      0.41% cov
    • Alignment Length
      22 bp
  • Binary vector pGV4042

    Binary vector pGV4042

    • Public DB hit
      GI:23381122
      AJ414108
    • Hit length
      3,669 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      AJ414108
      0.6% cov
    • Alignment Length
      22 bp
  • Cloning vector pHELLSGATE

    Cloning vector pHELLSGATE

    • Public DB hit
      GI:15982218
      AJ311874
    • Hit length
      18,691 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      AJ311874
      0.12% cov
    • Alignment Length
      22 bp
  • Cloning vector pKANNIBAL

    Cloning vector pKANNIBAL

    • Public DB hit
      GI:15982216
      AJ311873
    • Hit length
      6,063 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      AJ311873
      0.36% cov
    • Alignment Length
      22 bp
Occurrence
17 times in PatSeqDB
Tools
SEQ ID NO
7
Length
22
Sequence Type
nucleotide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
Occurrence
13 times in PatSeqDB
Tools
SEQ ID NO
8
Length
22
Sequence Type
nucleotide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
Occurrence
17 times in PatSeqDB
Tools
SEQ ID NO
9
Length
26
Sequence Type
nucleotide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
Occurrence
13 times in PatSeqDB
Tools
SEQ ID NO
10
Length
26
Sequence Type
nucleotide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
  • Megachile rotundata

    Megachile rotundata

    • Public DB hit
      GI:383080602
      NW_003797118
    • Hit length
      4,112,942 bp
    • E Value
      1.05E0
    • BLAST Score
      40.1 bits
    • Similarity
      95.83%
    • Coverage
      92.31%
    • Alignment (schematic)

      SEQ ID NO 10
      92.31% cov
      NW_003797118
      0% cov
    • Alignment Length
      24 bp
    • CIGAR string
      6MN17M2H mismatches: 1 - insertions: 0 - deletions: 0
Occurrence
13 times in PatSeqDB
Tools

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