Search for Biological Sequences disclosed in Patents

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Data obtained from: DDBJ Pat NCBI GenBank USPTO Fulltext EMBL-EBI Pat
3 sequences found in this patent (in total)

Displaying 3 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
279
Type
nucleotide
Locations
Detailed Description

Declared organism:
Arabidopsis thaliana

SEQ ID NO
2
Length
92
Type
peptide
Locations
Claims, Detailed Description, Summary

Declared organism:
Arabidopsis thaliana

Determined organism:
  • Arabidopsis thaliana

    Arabidopsis thaliana

    • Public DB hit
      GI:22331645
      NP_190355
      1 of 4 hits reported for Arabidopsis thaliana.
    • Hit length
      92 aa
    • E Value
      1.23E-43
    • BLAST Score
      180.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NP_190355
      100% cov
    • Alignment Length
      92 aa
    • CIGAR string
      92M mismatches: 0 - insertions: 0 - deletions: 0
  • Arabidopsis lyrata subsp. lyrata

    Arabidopsis lyrata subsp. lyrata

    • Public DB hit
      GI:297842199
      XP_002888981
      1 of 2 hits reported for Arabidopsis lyrata subsp. lyrata.
    • Hit length
      93 aa
    • E Value
      2.28E-23
    • BLAST Score
      112.8 bits
    • Similarity
      92.21%
    • Coverage
      83.7%
    • Alignment (schematic)

      SEQ ID NO 2
      83.7% cov
      XP_002888981
      82.8% cov
    • Alignment Length
      77 aa
    • CIGAR string
      15HM3N5M3NM2N5M3N3MN4MN4MN2MN5M2N10MN2M2N2MN10MNM mismatches: 22 - insertions: 0 - deletions: 0
  • Glycine max

    Glycine max

    • Public DB hit
      GI:255632824
      ACU16765
    • Hit length
      92 aa
    • E Value
      1.69E-22
    • BLAST Score
      109.8 bits
    • Similarity
      90.91%
    • Coverage
      83.7%
    • Alignment (schematic)

      SEQ ID NO 2
      83.7% cov
      ACU16765
      82.61% cov
    • Alignment Length
      77 aa
  • Ricinus communis

    Ricinus communis

    • Public DB hit
      GI:255540973
      XP_002511551
      1 of 2 hits reported for Ricinus communis.
    • Hit length
      91 aa
    • E Value
      1.23E-21
    • BLAST Score
      107.1 bits
    • Similarity
      89.61%
    • Coverage
      83.7%
    • Alignment (schematic)

      SEQ ID NO 2
      83.7% cov
      XP_002511551
      83.52% cov
    • Alignment Length
      77 aa
  • Vitis vinifera

    Vitis vinifera

    • Public DB hit
      GI:225456723
      XP_002274840
      1 of 3 hits reported for Vitis vinifera.
    • Hit length
      91 aa
    • E Value
      1.93E-21
    • BLAST Score
      106.3 bits
    • Similarity
      88.31%
    • Coverage
      83.7%
    • Alignment (schematic)

      SEQ ID NO 2
      83.7% cov
      XP_002274840
      83.52% cov
    • Alignment Length
      77 aa
  • Populus trichocarpa

    Populus trichocarpa

    • Public DB hit
      GI:224124054
      XP_002330093
      1 of 2 hits reported for Populus trichocarpa.
    • Hit length
      91 aa
    • E Value
      2.85E-20
    • BLAST Score
      102.4 bits
    • Similarity
      85.71%
    • Coverage
      83.7%
    • Alignment (schematic)

      SEQ ID NO 2
      83.7% cov
      XP_002330093
      83.52% cov
    • Alignment Length
      77 aa
SEQ ID NO
3
Length
697
Type
nucleotide
Locations
Detailed Description

Declared organism:
Arabidopsis thaliana

Determined organism:
  • Glycine max

    Glycine max

    • Public DB hit
      GI:255632823
      BT092494
    • Hit length
      722 bp
    • E Value
      0E0
    • BLAST Score
      941.1 bits
    • Similarity
      91.5%
    • Coverage
      98.71%
    • Alignment (schematic)

      SEQ ID NO 3
      98.71% cov
      BT092494
      95.71% cov
    • Alignment Length
      706 bp
    • CIGAR string
      1H37M2I44M8IMIMIMIMI17MIN2MIM2NMIMI22MN8M2DMD40MNMN13M2D17MN71MN112MN28MN3MN12MN2MN21MN4MN20MN12MN14MN30MNMN4MN19MN16MNM5DMDMDM2D2MD15MN25MN6MNMN15M8H mismatches: 27 - insertions: 18 - deletions: 15
Occurrence
4 times in PatSeqDB

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