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Search for Biological Sequences disclosed in Patents

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Data obtained from: DDBJ Pat NCBI GenBank USPTO PSIPS EMBL-EBI Pat
655 sequences found in this patent (in total)

Displaying 1 - 10 of 655 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
303
Type
peptide
Locations
Detailed Description, Summary

Declared organism:
Mycobacterium leprae

Determined organism:
  • Mycobacterium leprae TN

    Mycobacterium leprae TN

    • Public DB hit
      GI:15826872
      NP_301135
    • Hit length
      303 aa
    • E Value
      1.21E-172
    • BLAST Score
      610.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      NP_301135
      100% cov
    • Alignment Length
      303 aa
    • CIGAR string
      N302M mismatches: 1 - insertions: 0 - deletions: 0
Occurrence
4 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
137
Type
peptide
Locations
Detailed Description, Summary

Declared organism:
Mycobacterium leprae

Determined organism:
  • Mycobacterium leprae TN

    Mycobacterium leprae TN

    • Public DB hit
      GI:15826876
      NP_301139
    • Hit length
      137 aa
    • E Value
      3.84E-70
    • BLAST Score
      268.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NP_301139
      100% cov
    • Alignment Length
      137 aa
    • CIGAR string
      137M mismatches: 0 - insertions: 0 - deletions: 0
  • Mycobacterium tuberculosis SUMu003

    Mycobacterium tuberculosis SUMu003

    • Public DB hit
      GI:308370294
      ZP_07420941
    • Hit length
      149 aa
    • E Value
      4.23E-49
    • BLAST Score
      198.4 bits
    • Similarity
      83.94%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      ZP_07420941
      91.95% cov
    • Alignment Length
      137 aa
    • CIGAR string
      6MN3M2N5M2NMNMN3M2N2M2N4M2N3MN9M3N5MN3MN5M2N5MNM5N6MN4MN2MN7M3NMNMN9MNMN6M2N5M mismatches: 39 - insertions: 0 - deletions: 0
  • Mycobacterium tuberculosis H37Rv

    Mycobacterium tuberculosis H37Rv

    • Public DB hit
      GI:15607152
      NP_214524
    • Hit length
      141 aa
    • E Value
      5.81E-49
    • BLAST Score
      198 bits
    • Similarity
      83.94%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NP_214524
      97.16% cov
    • Alignment Length
      137 aa
    • CIGAR string
      6MN3M2N5M2NMNMN3M2N2M2N4M2N3MN9M3N5MN3MN5M2N5MNM5N6MN4MN2MN7M3NMNMN9MNMN6M2N5M mismatches: 39 - insertions: 0 - deletions: 0
  • Mycobacterium tuberculosis T46

    Mycobacterium tuberculosis T46

    • Public DB hit
      GI:260198999
      ZP_05766490
    • Hit length
      141 aa
    • E Value
      1E-48
    • BLAST Score
      197.2 bits
    • Similarity
      83.94%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      ZP_05766490
      97.16% cov
    • Alignment Length
      137 aa
  • Mycobacterium africanum K85

    Mycobacterium africanum K85

    • Public DB hit
      GI:260203150
      ZP_05770641
    • Hit length
      141 aa
    • E Value
      1.68E-48
    • BLAST Score
      196.4 bits
    • Similarity
      83.21%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      ZP_05770641
      97.16% cov
    • Alignment Length
      137 aa
  • Mycobacterium tuberculosis CPHL_A

    Mycobacterium tuberculosis CPHL_A

    • Public DB hit
      GI:260184866
      ZP_05762340
    • Hit length
      141 aa
    • E Value
      4.64E-48
    • BLAST Score
      194.9 bits
    • Similarity
      83.21%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      ZP_05762340
      97.16% cov
    • Alignment Length
      137 aa
  • Mycobacterium avium subsp. paratuberculosis K-10

    Mycobacterium avium subsp. paratuberculosis K-10

    • Public DB hit
      GI:41406110
      NP_958946
    • Hit length
      141 aa
    • E Value
      9.05E-47
    • BLAST Score
      190.7 bits
    • Similarity
      81.75%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NP_958946
      97.16% cov
    • Alignment Length
      137 aa
  • Mycobacterium marinum M

    Mycobacterium marinum M

    • Public DB hit
      GI:183980047
      YP_001848338
    • Hit length
      141 aa
    • E Value
      5.68E-44
    • BLAST Score
      181.4 bits
    • Similarity
      77.37%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      YP_001848338
      97.16% cov
    • Alignment Length
      137 aa
  • Mycobacterium ulcerans Agy99

    Mycobacterium ulcerans Agy99

    • Public DB hit
      GI:118615931
      YP_904263
    • Hit length
      141 aa
    • E Value
      1.22E-43
    • BLAST Score
      180.3 bits
    • Similarity
      76.64%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      YP_904263
      97.16% cov
    • Alignment Length
      137 aa
  • Mycobacterium sp. MCS

    Mycobacterium sp. MCS

    • Public DB hit
      GI:108796992
      YP_637189
    • Hit length
      139 aa
    • E Value
      6.02E-41
    • BLAST Score
      171.4 bits
    • Similarity
      76.64%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      YP_637189
      98.56% cov
    • Alignment Length
      137 aa
  • Mycobacterium parascrofulaceum ATCC BAA-614

    Mycobacterium parascrofulaceum ATCC BAA-614

    • Public DB hit
      GI:296167121
      ZP_06849530
    • Hit length
      141 aa
    • E Value
      1.63E-39
    • BLAST Score
      166.4 bits
    • Similarity
      78.1%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      ZP_06849530
      97.16% cov
    • Alignment Length
      137 aa
  • Mycobacterium tuberculosis str. Haarlem

    Mycobacterium tuberculosis str. Haarlem

    • Public DB hit
      GI:254366470
      ZP_04982514
    • Hit length
      120 aa
    • E Value
      6.34E-39
    • BLAST Score
      164.5 bits
    • Similarity
      84.48%
    • Coverage
      84.67%
    • Alignment (schematic)

      SEQ ID NO 2
      84.67% cov
      ZP_04982514
      96.67% cov
    • Alignment Length
      116 aa
Occurrence
4 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
3
Length
93
Type
peptide
Locations
Detailed Description, Summary

Declared organism:
Mycobacterium leprae

Determined organism:
  • Mycobacterium leprae TN

    Mycobacterium leprae TN

    • Public DB hit
      GI:15826877
      NP_301140
    • Hit length
      93 aa
    • E Value
      9.38E-46
    • BLAST Score
      187.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NP_301140
      100% cov
    • Alignment Length
      93 aa
    • CIGAR string
      93M mismatches: 0 - insertions: 0 - deletions: 0
  • Mycobacterium avium subsp. paratuberculosis K-10

    Mycobacterium avium subsp. paratuberculosis K-10

    • Public DB hit
      GI:41406111
      NP_958947
    • Hit length
      93 aa
    • E Value
      6.51E-43
    • BLAST Score
      177.6 bits
    • Similarity
      98.92%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NP_958947
      100% cov
    • Alignment Length
      93 aa
    • CIGAR string
      13M3N18MN2MN17MNMN6MN28M mismatches: 8 - insertions: 0 - deletions: 0
  • Mycobacterium tuberculosis EAS054

    Mycobacterium tuberculosis EAS054

    • Public DB hit
      GI:215432920
      ZP_03430839
    • Hit length
      93 aa
    • E Value
      7.44E-43
    • BLAST Score
      177.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      ZP_03430839
      100% cov
    • Alignment Length
      93 aa
    • CIGAR string
      14M2N5MN12MN2MN7MN9MNMN6MN28M mismatches: 9 - insertions: 0 - deletions: 0
  • Mycobacterium tuberculosis KZN 605

    Mycobacterium tuberculosis KZN 605

    • Public DB hit
      GI:289552261
      ZP_06441471
    • Hit length
      94 aa
    • E Value
      1.02E-42
    • BLAST Score
      177.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      ZP_06441471
      98.94% cov
    • Alignment Length
      93 aa
  • Mycobacterium tuberculosis H37Rv

    Mycobacterium tuberculosis H37Rv

    • Public DB hit
      GI:15607153
      NP_214525
    • Hit length
      93 aa
    • E Value
      1.22E-42
    • BLAST Score
      176.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NP_214525
      100% cov
    • Alignment Length
      93 aa
  • Mycobacterium ulcerans Agy99

    Mycobacterium ulcerans Agy99

    • Public DB hit
      GI:118615932
      YP_904264
    • Hit length
      93 aa
    • E Value
      8.64E-42
    • BLAST Score
      174.1 bits
    • Similarity
      95.7%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      YP_904264
      100% cov
    • Alignment Length
      93 aa
  • Mycobacterium parascrofulaceum ATCC BAA-614

    Mycobacterium parascrofulaceum ATCC BAA-614

    • Public DB hit
      GI:296167120
      ZP_06849529
    • Hit length
      93 aa
    • E Value
      8.79E-42
    • BLAST Score
      174.1 bits
    • Similarity
      96.77%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      ZP_06849529
      100% cov
    • Alignment Length
      93 aa
  • Mycobacterium kansasii ATCC 12478

    Mycobacterium kansasii ATCC 12478

    • Public DB hit
      GI:240172111
      ZP_04750770
    • Hit length
      93 aa
    • E Value
      1.45E-41
    • BLAST Score
      173.3 bits
    • Similarity
      94.62%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      ZP_04750770
      100% cov
    • Alignment Length
      93 aa
  • Mycobacterium sp. MCS

    Mycobacterium sp. MCS

    • Public DB hit
      GI:108796993
      YP_637190
    • Hit length
      94 aa
    • E Value
      5.43E-36
    • BLAST Score
      154.8 bits
    • Similarity
      86.17%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      YP_637190
      100% cov
    • Alignment Length
      94 aa
  • Mycobacterium gilvum PYR-GCK

    Mycobacterium gilvum PYR-GCK

    • Public DB hit
      GI:145221409
      YP_001132087
    • Hit length
      93 aa
    • E Value
      1.35E-34
    • BLAST Score
      150.2 bits
    • Similarity
      82.8%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      YP_001132087
      100% cov
    • Alignment Length
      93 aa
  • Mycobacterium gilvum Spyr1

    Mycobacterium gilvum Spyr1

    • Public DB hit
      GI:315441711
      YP_004074590
    • Hit length
      93 aa
    • E Value
      2.72E-34
    • BLAST Score
      149.1 bits
    • Similarity
      81.72%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      YP_004074590
      100% cov
    • Alignment Length
      93 aa
  • Mycobacterium smegmatis str. MC2 155

    Mycobacterium smegmatis str. MC2 155

    • Public DB hit
      GI:118471515
      YP_884446
    • Hit length
      94 aa
    • E Value
      5.04E-34
    • BLAST Score
      148.3 bits
    • Similarity
      82.98%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      YP_884446
      100% cov
    • Alignment Length
      94 aa
  • Mycobacterium vanbaalenii PYR-1

    Mycobacterium vanbaalenii PYR-1

    • Public DB hit
      GI:120401047
      YP_950876
    • Hit length
      93 aa
    • E Value
      8.31E-34
    • BLAST Score
      147.5 bits
    • Similarity
      81.72%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      YP_950876
      100% cov
    • Alignment Length
      93 aa
Occurrence
4 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
4
Length
488
Type
peptide
Locations
Detailed Description, Summary

Declared organism:
Mycobacterium leprae

Determined organism:
  • Mycobacterium leprae TN

    Mycobacterium leprae TN

    • Public DB hit
      GI:15826885
      NP_301148
    • Hit length
      488 aa
    • E Value
      0E0
    • BLAST Score
      965.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NP_301148
      100% cov
    • Alignment Length
      488 aa
    • CIGAR string
      488M mismatches: 0 - insertions: 0 - deletions: 0
  • Mycobacterium leprae

    Mycobacterium leprae

    • Public DB hit
      GI:2344826
      CAA94723
    • Hit length
      463 aa
    • E Value
      0E0
    • BLAST Score
      912.1 bits
    • Similarity
      100%
    • Coverage
      94.88%
    • Alignment (schematic)

      SEQ ID NO 4
      94.88% cov
      CAA94723
      100% cov
    • Alignment Length
      463 aa
    • CIGAR string
      25H463M mismatches: 0 - insertions: 0 - deletions: 0
  • Mycobacterium tuberculosis CPHL_A

    Mycobacterium tuberculosis CPHL_A

    • Public DB hit
      GI:260184877
      ZP_05762351
    • Hit length
      521 aa
    • E Value
      3.93E-173
    • BLAST Score
      613.2 bits
    • Similarity
      78.48%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      ZP_05762351
      100% cov
    • Alignment Length
      525 aa
    • CIGAR string
      M2N2MNMN2MN5M3N6MN18MN2M2N21MN2M2N3MNMNM2N2MN6MN14MN3MN5MN3M2N6M2NMNMNM2NMN3MN2MN5MN2MN14MN3I2MNMN3MN4MNI5MN4MN3M2NMN2MNMNMNMIMNM11IN7MNMN2MN3MNMN7I8MN5MIM2N2M3I3M2NMN5M2INM4NMN10MN7M2N4MN3MNMN5MN5MD8M5N3MN2MIM3N2MNMNMN2IN2M2D3M2N15MN2MND2MN2MN5I2NMN4M2NM2NMN19MN31MN36MNM mismatches: 106 - insertions: 37 - deletions: 4
  • Mycobacterium africanum K85

    Mycobacterium africanum K85

    • Public DB hit
      GI:260203161
      ZP_05770652
    • Hit length
      521 aa
    • E Value
      3.27E-172
    • BLAST Score
      610.1 bits
    • Similarity
      78.29%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      ZP_05770652
      100% cov
    • Alignment Length
      525 aa
  • Mycobacterium bovis BCG str. Pasteur 1173P2

    Mycobacterium bovis BCG str. Pasteur 1173P2

    • Public DB hit
      GI:121635930
      YP_976153
    • Hit length
      521 aa
    • E Value
      3.47E-172
    • BLAST Score
      610.1 bits
    • Similarity
      78.29%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      YP_976153
      100% cov
    • Alignment Length
      525 aa
  • Mycobacterium tuberculosis CDC1551

    Mycobacterium tuberculosis CDC1551

    • Public DB hit
      GI:15839394
      NP_334431
    • Hit length
      521 aa
    • E Value
      4.88E-172
    • BLAST Score
      609.8 bits
    • Similarity
      78.29%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NP_334431
      100% cov
    • Alignment Length
      525 aa
  • Mycobacterium tuberculosis EAS054

    Mycobacterium tuberculosis EAS054

    • Public DB hit
      GI:215432930
      ZP_03430849
    • Hit length
      521 aa
    • E Value
      6.11E-172
    • BLAST Score
      609.4 bits
    • Similarity
      78.29%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      ZP_03430849
      100% cov
    • Alignment Length
      525 aa
  • Mycobacterium tuberculosis H37Rv

    Mycobacterium tuberculosis H37Rv

    • Public DB hit
      GI:15607162
      NP_214534
    • Hit length
      527 aa
    • E Value
      5.62E-171
    • BLAST Score
      606.3 bits
    • Similarity
      76.84%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NP_214534
      100% cov
    • Alignment Length
      531 aa
  • Mycobacterium bovis AF2122/97

    Mycobacterium bovis AF2122/97

    • Public DB hit
      GI:31791197
      NP_853690
    • Hit length
      521 aa
    • E Value
      5.96E-171
    • BLAST Score
      605.9 bits
    • Similarity
      78.1%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NP_853690
      100% cov
    • Alignment Length
      525 aa
  • Mycobacterium avium subsp. paratuberculosis S397

    Mycobacterium avium subsp. paratuberculosis S397

    • Public DB hit
      GI:336462097
      EGO40939
    • Hit length
      511 aa
    • E Value
      5.2E-157
    • BLAST Score
      559.7 bits
    • Similarity
      75.68%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      EGO40939
      100% cov
    • Alignment Length
      518 aa
Occurrence
4 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
5
Length
113
Type
peptide
Locations
Detailed Description, Summary

Declared organism:
Mycobacterium leprae

Determined organism:
  • Mycobacterium leprae TN

    Mycobacterium leprae TN

    • Public DB hit
      GI:15826891
      NP_301154
    • Hit length
      113 aa
    • E Value
      4.68E-55
    • BLAST Score
      218 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NP_301154
      100% cov
    • Alignment Length
      113 aa
    • CIGAR string
      113M mismatches: 0 - insertions: 0 - deletions: 0
  • Mycobacterium kansasii ATCC 12478

    Mycobacterium kansasii ATCC 12478

    • Public DB hit
      GI:240168765
      ZP_04747424
    • Hit length
      116 aa
    • E Value
      4.22E-36
    • BLAST Score
      155.2 bits
    • Similarity
      78.45%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      ZP_04747424
      100% cov
    • Alignment Length
      116 aa
    • CIGAR string
      5MN7MN5MNMNMNM2NMN3MN2MN5MN5MN2MN9MNMN3MNM2N2M2N2MN4MN8MN3MNM3I4N2M2N2MNMN4M mismatches: 32 - insertions: 3 - deletions: 0
  • Mycobacterium intracellulare ATCC 13950

    Mycobacterium intracellulare ATCC 13950

    • Public DB hit
      GI:254819074
      ZP_05224075
    • Hit length
      113 aa
    • E Value
      7.14E-34
    • BLAST Score
      147.9 bits
    • Similarity
      78.76%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      ZP_05224075
      100% cov
    • Alignment Length
      113 aa
    • CIGAR string
      5MN2MN4MN2MN4MNMN2M5NMN2MN5MN5MN2MN7MN2MN4MNM2N3MN2MN12M2N2M2NMNM2NM3N4M2N2MN mismatches: 36 - insertions: 0 - deletions: 0
  • Mycobacterium avium subsp. paratuberculosis K-10

    Mycobacterium avium subsp. paratuberculosis K-10

    • Public DB hit
      GI:41406144
      NP_958980
    • Hit length
      113 aa
    • E Value
      1.02E-32
    • BLAST Score
      144.1 bits
    • Similarity
      79.46%
    • Coverage
      99.12%
    • Alignment (schematic)

      SEQ ID NO 5
      99.12% cov
      NP_958980
      99.12% cov
    • Alignment Length
      112 aa
  • Mycobacterium bovis AF2122/97

    Mycobacterium bovis AF2122/97

    • Public DB hit
      GI:31791216
      NP_853709
    • Hit length
      115 aa
    • E Value
      1.76E-26
    • BLAST Score
      123.2 bits
    • Similarity
      75.65%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NP_853709
      100% cov
    • Alignment Length
      115 aa
  • Mycobacterium tuberculosis H37Rv

    Mycobacterium tuberculosis H37Rv

    • Public DB hit
      GI:15607181
      NP_214553
    • Hit length
      115 aa
    • E Value
      4.72E-26
    • BLAST Score
      121.7 bits
    • Similarity
      75.65%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NP_214553
      100% cov
    • Alignment Length
      115 aa
  • Mycobacterium tuberculosis C

    Mycobacterium tuberculosis C

    • Public DB hit
      GI:254233439
      ZP_04926765
    • Hit length
      109 aa
    • E Value
      3.93E-22
    • BLAST Score
      108.6 bits
    • Similarity
      76.15%
    • Coverage
      94.69%
    • Alignment (schematic)

      SEQ ID NO 5
      94.69% cov
      ZP_04926765
      100% cov
    • Alignment Length
      109 aa
  • Mycobacterium parascrofulaceum ATCC BAA-614

    Mycobacterium parascrofulaceum ATCC BAA-614

    • Public DB hit
      GI:296167090
      ZP_06849500
    • Hit length
      113 aa
    • E Value
      7.99E-22
    • BLAST Score
      107.8 bits
    • Similarity
      82.11%
    • Coverage
      84.07%
    • Alignment (schematic)

      SEQ ID NO 5
      84.07% cov
      ZP_06849500
      84.07% cov
    • Alignment Length
      95 aa
  • Mycobacterium tuberculosis T92

    Mycobacterium tuberculosis T92

    • Public DB hit
      GI:215425233
      ZP_03423152
    • Hit length
      98 aa
    • E Value
      5.82E-21
    • BLAST Score
      104.8 bits
    • Similarity
      75.51%
    • Coverage
      84.96%
    • Alignment (schematic)

      SEQ ID NO 5
      84.96% cov
      ZP_03423152
      100% cov
    • Alignment Length
      98 aa
Occurrence
4 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
6
Length
278
Type
peptide
Locations
Detailed Description, Summary

Declared organism:
Mycobacterium leprae

Determined organism:
  • Mycobacterium leprae TN

    Mycobacterium leprae TN

    • Public DB hit
      GI:15826892
      NP_301155
    • Hit length
      278 aa
    • E Value
      4.92E-155
    • BLAST Score
      552 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NP_301155
      100% cov
    • Alignment Length
      278 aa
    • CIGAR string
      278M mismatches: 0 - insertions: 0 - deletions: 0
  • Mycobacterium leprae

    Mycobacterium leprae

    • Public DB hit
      GI:2344829
      CAA94726
    • Hit length
      278 aa
    • E Value
      1.08E-153
    • BLAST Score
      547.4 bits
    • Similarity
      99.64%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      CAA94726
      100% cov
    • Alignment Length
      278 aa
    • CIGAR string
      81M2N10MN184M mismatches: 3 - insertions: 0 - deletions: 0
  • Mycobacterium tuberculosis T92

    Mycobacterium tuberculosis T92

    • Public DB hit
      GI:215425234
      ZP_03423153
    • Hit length
      316 aa
    • E Value
      4.04E-86
    • BLAST Score
      323.2 bits
    • Similarity
      76.92%
    • Coverage
      94.24%
    • Alignment (schematic)

      SEQ ID NO 6
      94.24% cov
      ZP_03423153
      85.44% cov
    • Alignment Length
      273 aa
    • CIGAR string
      3M3N4MN3MNM4N2M5NMNMN3M2NMN2M3NMDM2N2M2N2MNM2N2MN3M2D2N3M3NMN11I3M2NM4NM2NM4NM2NMNM4NM2N2MN2MN12MNMN14MN9MN10MNMNMN3MN6M2NMNMNMN8MNMN16MN12MN2MN17MNMN3MN6MNM16H mismatches: 81 - insertions: 11 - deletions: 3
  • Mycobacterium tuberculosis C

    Mycobacterium tuberculosis C

    • Public DB hit
      GI:254233440
      ZP_04926766
    • Hit length
      310 aa
    • E Value
      8.21E-85
    • BLAST Score
      318.5 bits
    • Similarity
      76.92%
    • Coverage
      94.24%
    • Alignment (schematic)

      SEQ ID NO 6
      94.24% cov
      ZP_04926766
      87.1% cov
    • Alignment Length
      273 aa
  • Mycobacterium tuberculosis CDC1551

    Mycobacterium tuberculosis CDC1551

    • Public DB hit
      GI:15839417
      NP_334454
    • Hit length
      310 aa
    • E Value
      2.14E-84
    • BLAST Score
      317.4 bits
    • Similarity
      76.92%
    • Coverage
      94.24%
    • Alignment (schematic)

      SEQ ID NO 6
      94.24% cov
      NP_334454
      87.1% cov
    • Alignment Length
      273 aa
  • Mycobacterium tuberculosis GM 1503

    Mycobacterium tuberculosis GM 1503

    • Public DB hit
      GI:218755763
      ZP_03534559
    • Hit length
      310 aa
    • E Value
      7.43E-84
    • BLAST Score
      315.5 bits
    • Similarity
      76.56%
    • Coverage
      94.24%
    • Alignment (schematic)

      SEQ ID NO 6
      94.24% cov
      ZP_03534559
      87.1% cov
    • Alignment Length
      273 aa
  • Mycobacterium tuberculosis SUMu001

    Mycobacterium tuberculosis SUMu001

    • Public DB hit
      GI:308232622
      ZP_07416668
    • Hit length
      220 aa
    • E Value
      1.66E-75
    • BLAST Score
      287.7 bits
    • Similarity
      90.53%
    • Coverage
      60.79%
    • Alignment (schematic)

      SEQ ID NO 6
      60.79% cov
      ZP_07416668
      76.82% cov
    • Alignment Length
      169 aa
  • Mycobacterium tuberculosis SUMu003

    Mycobacterium tuberculosis SUMu003

    • Public DB hit
      GI:308370298
      ZP_07420973
    • Hit length
      217 aa
    • E Value
      2.28E-75
    • BLAST Score
      287.3 bits
    • Similarity
      90.53%
    • Coverage
      60.79%
    • Alignment (schematic)

      SEQ ID NO 6
      60.79% cov
      ZP_07420973
      77.88% cov
    • Alignment Length
      169 aa
Occurrence
9 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
7
Length
467
Type
peptide
Locations
Detailed Description, Summary

Declared organism:
Mycobacterium leprae

Determined organism:
  • Mycobacterium leprae TN

    Mycobacterium leprae TN

    • Public DB hit
      GI:15826895
      NP_301158
    • Hit length
      467 aa
    • E Value
      0E0
    • BLAST Score
      956.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NP_301158
      100% cov
    • Alignment Length
      467 aa
    • CIGAR string
      467M mismatches: 0 - insertions: 0 - deletions: 0
  • Mycobacterium leprae Br4923

    Mycobacterium leprae Br4923

    • Public DB hit
      GI:221229373
      YP_002502789
    • Hit length
      467 aa
    • E Value
      0E0
    • BLAST Score
      952.2 bits
    • Similarity
      99.79%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      YP_002502789
      100% cov
    • Alignment Length
      467 aa
    • CIGAR string
      286MN180M mismatches: 1 - insertions: 0 - deletions: 0
  • Mycobacterium tuberculosis H37Rv

    Mycobacterium tuberculosis H37Rv

    • Public DB hit
      GI:15611018
      NP_218399
    • Hit length
      462 aa
    • E Value
      0E0
    • BLAST Score
      694.5 bits
    • Similarity
      84.63%
    • Coverage
      98.93%
    • Alignment (schematic)

      SEQ ID NO 7
      98.93% cov
      NP_218399
      100% cov
    • Alignment Length
      462 aa
    • CIGAR string
      4M2N4MNMN3M2N2MN5MNM2NMN8M2NMN2M3NMNMN2M3N2M2NMNM3N2M3NMNM2N4MN6MNMNM2N3M2N3MNMN15MNMN3MNMNMNMNMN11M2N8M2NM2N3MN7MN5MN5MN5MN10MN9MN2MN5MN11MN2M3N5MN2M2N5M2NM2N2M2N2MN2MN3MN13MN4M2N2MN2MN3M2N5MN2MN2MNMNMN3MNM3N2M2N3MN16MN9M4N3MN14M2N2MNMN3MN3MN2M2N2M3N11MNMN2M2N4MNM2N7MN5MN5M2N3MN3M5H mismatches: 129 - insertions: 0 - deletions: 0
  • Mycobacterium tuberculosis KZN 1435

    Mycobacterium tuberculosis KZN 1435

    • Public DB hit
      GI:253800932
      YP_003033934
    • Hit length
      462 aa
    • E Value
      0E0
    • BLAST Score
      694.1 bits
    • Similarity
      84.63%
    • Coverage
      98.93%
    • Alignment (schematic)

      SEQ ID NO 7
      98.93% cov
      YP_003033934
      100% cov
    • Alignment Length
      462 aa
  • Mycobacterium tuberculosis 210

    Mycobacterium tuberculosis 210

    • Public DB hit
      GI:294995567
      ZP_06801258
    • Hit length
      462 aa
    • E Value
      0E0
    • BLAST Score
      693.7 bits
    • Similarity
      84.63%
    • Coverage
      98.93%
    • Alignment (schematic)

      SEQ ID NO 7
      98.93% cov
      ZP_06801258
      100% cov
    • Alignment Length
      462 aa
  • Mycobacterium tuberculosis str. Haarlem

    Mycobacterium tuberculosis str. Haarlem

    • Public DB hit
      GI:254366425
      ZP_04982469
    • Hit length
      462 aa
    • E Value
      0E0
    • BLAST Score
      693.7 bits
    • Similarity
      84.42%
    • Coverage
      98.93%
    • Alignment (schematic)

      SEQ ID NO 7
      98.93% cov
      ZP_04982469
      100% cov
    • Alignment Length
      462 aa
  • Mycobacterium africanum K85

    Mycobacterium africanum K85

    • Public DB hit
      GI:260203093
      ZP_05770584
    • Hit length
      462 aa
    • E Value
      0E0
    • BLAST Score
      693 bits
    • Similarity
      84.42%
    • Coverage
      98.93%
    • Alignment (schematic)

      SEQ ID NO 7
      98.93% cov
      ZP_05770584
      100% cov
    • Alignment Length
      462 aa
  • Mycobacterium tuberculosis T17

    Mycobacterium tuberculosis T17

    • Public DB hit
      GI:219559982
      ZP_03539058
    • Hit length
      462 aa
    • E Value
      0E0
    • BLAST Score
      690.6 bits
    • Similarity
      84.42%
    • Coverage
      98.93%
    • Alignment (schematic)

      SEQ ID NO 7
      98.93% cov
      ZP_03539058
      100% cov
    • Alignment Length
      462 aa
  • Mycobacterium kansasii ATCC 12478

    Mycobacterium kansasii ATCC 12478

    • Public DB hit
      GI:240168362
      ZP_04747021
    • Hit length
      465 aa
    • E Value
      0E0
    • BLAST Score
      676.8 bits
    • Similarity
      83.23%
    • Coverage
      98.93%
    • Alignment (schematic)

      SEQ ID NO 7
      98.93% cov
      ZP_04747021
      100% cov
    • Alignment Length
      465 aa
  • Mycobacterium marinum M

    Mycobacterium marinum M

    • Public DB hit
      GI:183985429
      YP_001853720
    • Hit length
      465 aa
    • E Value
      0E0
    • BLAST Score
      657.1 bits
    • Similarity
      83.01%
    • Coverage
      98.93%
    • Alignment (schematic)

      SEQ ID NO 7
      98.93% cov
      YP_001853720
      100% cov
    • Alignment Length
      465 aa
  • Mycobacterium vanbaalenii PYR-1

    Mycobacterium vanbaalenii PYR-1

    • Public DB hit
      GI:120401119
      YP_950948
    • Hit length
      465 aa
    • E Value
      5.17E-153
    • BLAST Score
      546.6 bits
    • Similarity
      75.99%
    • Coverage
      97.22%
    • Alignment (schematic)

      SEQ ID NO 7
      97.22% cov
      YP_950948
      97.63% cov
    • Alignment Length
      454 aa
Occurrence
4 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
8
Length
113
Type
peptide
Locations
Detailed Description, Summary

Declared organism:
Mycobacterium leprae

Determined organism:
  • Mycobacterium leprae TN

    Mycobacterium leprae TN

    • Public DB hit
      GI:15826896
      NP_301159
    • Hit length
      113 aa
    • E Value
      3.7E-60
    • BLAST Score
      235 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NP_301159
      100% cov
    • Alignment Length
      113 aa
    • CIGAR string
      113M mismatches: 0 - insertions: 0 - deletions: 0
  • Mycobacterium kansasii ATCC 12478

    Mycobacterium kansasii ATCC 12478

    • Public DB hit
      GI:240170255
      ZP_04748914
      1 of 2 hits reported for Mycobacterium kansasii ATCC 12478.
    • Hit length
      112 aa
    • E Value
      2.15E-29
    • BLAST Score
      132.9 bits
    • Similarity
      76.58%
    • Coverage
      98.23%
    • Alignment (schematic)

      SEQ ID NO 8
      98.23% cov
      ZP_04748914
      99.11% cov
    • Alignment Length
      111 aa
    • CIGAR string
      MN4MNM3N2M2N6M6NM2NMN5M2NMNMN2MN12MNMNM3NM3N2MNMN8M7NMN2M2N2M2NM3NM2NM2N2M2H mismatches: 50 - insertions: 0 - deletions: 0
  • Mycobacterium tuberculosis C

    Mycobacterium tuberculosis C

    • Public DB hit
      GI:254233367
      ZP_04926693
    • Hit length
      113 aa
    • E Value
      1.81E-24
    • BLAST Score
      116.3 bits
    • Similarity
      75%
    • Coverage
      95.58%
    • Alignment (schematic)

      SEQ ID NO 8
      95.58% cov
      ZP_04926693
      95.58% cov
    • Alignment Length
      108 aa
  • Mycobacterium tuberculosis H37Rv

    Mycobacterium tuberculosis H37Rv

    • Public DB hit
      GI:15611016
      NP_218397
    • Hit length
      115 aa
    • E Value
      4.84E-24
    • BLAST Score
      115.2 bits
    • Similarity
      75%
    • Coverage
      95.58%
    • Alignment (schematic)

      SEQ ID NO 8
      95.58% cov
      NP_218397
      93.91% cov
    • Alignment Length
      108 aa
  • Mycobacterium tuberculosis CDC1551

    Mycobacterium tuberculosis CDC1551

    • Public DB hit
      GI:15843512
      NP_338549
    • Hit length
      113 aa
    • E Value
      5.77E-24
    • BLAST Score
      114.8 bits
    • Similarity
      75%
    • Coverage
      95.58%
    • Alignment (schematic)

      SEQ ID NO 8
      95.58% cov
      NP_338549
      95.58% cov
    • Alignment Length
      108 aa
  • Mycobacterium ulcerans Agy99

    Mycobacterium ulcerans Agy99

    • Public DB hit
      GI:118619680
      YP_908012
    • Hit length
      95 aa
    • E Value
      7.04E-24
    • BLAST Score
      114.4 bits
    • Similarity
      75.27%
    • Coverage
      82.3%
    • Alignment (schematic)

      SEQ ID NO 8
      82.3% cov
      YP_908012
      97.89% cov
    • Alignment Length
      93 aa
Occurrence
4 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
9
Length
512
Type
peptide
Locations
Detailed Description, Summary

Declared organism:
Mycobacterium leprae

Determined organism:
  • Mycobacterium leprae TN

    Mycobacterium leprae TN

    • Public DB hit
      GI:15826897
      NP_301160
    • Hit length
      512 aa
    • E Value
      0E0
    • BLAST Score
      1,003 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      NP_301160
      100% cov
    • Alignment Length
      512 aa
    • CIGAR string
      N511M mismatches: 1 - insertions: 0 - deletions: 0
  • Mycobacterium leprae

    Mycobacterium leprae

    • Public DB hit
      GI:2370277
      CAA75198
    • Hit length
      480 aa
    • E Value
      0E0
    • BLAST Score
      945.7 bits
    • Similarity
      100%
    • Coverage
      93.75%
    • Alignment (schematic)

      SEQ ID NO 9
      93.75% cov
      CAA75198
      100% cov
    • Alignment Length
      480 aa
    • CIGAR string
      32H480M mismatches: 0 - insertions: 0 - deletions: 0
  • Mycobacterium kansasii ATCC 12478

    Mycobacterium kansasii ATCC 12478

    • Public DB hit
      GI:240168357
      ZP_04747016
    • Hit length
      511 aa
    • E Value
      0E0
    • BLAST Score
      724.9 bits
    • Similarity
      86.44%
    • Coverage
      96.48%
    • Alignment (schematic)

      SEQ ID NO 9
      96.48% cov
      ZP_04747016
      96.48% cov
    • Alignment Length
      494 aa
    • CIGAR string
      18HNM2N17M5NMN3MN5MN5MNMN14MN5MN2M2N6MN12M2N20MN5MNMNMN3M2N5M2N4MN3MN3MN7MN5M3NMNMNM2N2M2N2M2N3MN6MNM5N3M3N3MN2MN3MN2MN4MN7MN4MN2M4N3MN3MN2M4NMNMNMN7MN2MN40MD2M3N2MN12MNMN2MN6MN3MN6M2N3MNM2NMN3MNMN4MN6MNMN2MNMN7MN6MN11MNMNM2N2M3N3MN2MN2M2NM2N2MNMN3M2N7MN3MN6MN4MN6M2NMN5M2NM mismatches: 125 - insertions: 0 - deletions: 1
  • Mycobacterium tuberculosis H37Rv

    Mycobacterium tuberculosis H37Rv

    • Public DB hit
      GI:15611013
      NP_218394
    • Hit length
      511 aa
    • E Value
      0E0
    • BLAST Score
      688 bits
    • Similarity
      84.43%
    • Coverage
      95.31%
    • Alignment (schematic)

      SEQ ID NO 9
      95.31% cov
      NP_218394
      95.3% cov
    • Alignment Length
      488 aa
  • Mycobacterium tuberculosis SUMu001

    Mycobacterium tuberculosis SUMu001

    • Public DB hit
      GI:308232599
      ZP_07416579
    • Hit length
      487 aa
    • E Value
      0E0
    • BLAST Score
      686.8 bits
    • Similarity
      84.43%
    • Coverage
      95.31%
    • Alignment (schematic)

      SEQ ID NO 9
      95.31% cov
      ZP_07416579
      100% cov
    • Alignment Length
      488 aa
  • Mycobacterium tuberculosis T46

    Mycobacterium tuberculosis T46

    • Public DB hit
      GI:289441319
      ZP_06431063
      1 of 2 hits reported for Mycobacterium tuberculosis T46.
    • Hit length
      511 aa
    • E Value
      0E0
    • BLAST Score
      686.8 bits
    • Similarity
      84.43%
    • Coverage
      95.31%
    • Alignment (schematic)

      SEQ ID NO 9
      95.31% cov
      ZP_06431063
      95.3% cov
    • Alignment Length
      488 aa
  • Mycobacterium tuberculosis 02_1987

    Mycobacterium tuberculosis 02_1987

    • Public DB hit
      GI:289748110
      ZP_06507488
      1 of 3 hits reported for Mycobacterium tuberculosis 02_1987.
    • Hit length
      511 aa
    • E Value
      0E0
    • BLAST Score
      686.4 bits
    • Similarity
      84.43%
    • Coverage
      95.31%
    • Alignment (schematic)

      SEQ ID NO 9
      95.31% cov
      ZP_06507488
      95.3% cov
    • Alignment Length
      488 aa
  • Mycobacterium tuberculosis CDC1551

    Mycobacterium tuberculosis CDC1551

    • Public DB hit
      GI:15843508
      NP_338545
    • Hit length
      479 aa
    • E Value
      0E0
    • BLAST Score
      674.1 bits
    • Similarity
      84.17%
    • Coverage
      93.75%
    • Alignment (schematic)

      SEQ ID NO 9
      93.75% cov
      NP_338545
      100% cov
    • Alignment Length
      480 aa
  • Mycobacterium tuberculosis '98-R604 INH-RIF-EM'

    Mycobacterium tuberculosis '98-R604 INH-RIF-EM'

    • Public DB hit
      GI:254548882
      ZP_05139329
    • Hit length
      479 aa
    • E Value
      0E0
    • BLAST Score
      672.2 bits
    • Similarity
      83.96%
    • Coverage
      93.75%
    • Alignment (schematic)

      SEQ ID NO 9
      93.75% cov
      ZP_05139329
      100% cov
    • Alignment Length
      480 aa
  • Mycobacterium marinum M

    Mycobacterium marinum M

    • Public DB hit
      GI:183985423
      YP_001853714
    • Hit length
      479 aa
    • E Value
      0E0
    • BLAST Score
      660.6 bits
    • Similarity
      84.38%
    • Coverage
      93.75%
    • Alignment (schematic)

      SEQ ID NO 9
      93.75% cov
      YP_001853714
      100% cov
    • Alignment Length
      480 aa
Occurrence
4 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
10
Length
586
Type
peptide
Locations
Detailed Description, Summary

Declared organism:
Mycobacterium leprae

Determined organism:
  • Mycobacterium leprae TN

    Mycobacterium leprae TN

    • Public DB hit
      GI:15826898
      NP_301161
    • Hit length
      586 aa
    • E Value
      0E0
    • BLAST Score
      1,184.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      NP_301161
      100% cov
    • Alignment Length
      586 aa
    • CIGAR string
      586M mismatches: 0 - insertions: 0 - deletions: 0
  • Mycobacterium leprae

    Mycobacterium leprae

    • Public DB hit
      GI:2370278
      CAA75199
    • Hit length
      478 aa
    • E Value
      0E0
    • BLAST Score
      920.6 bits
    • Similarity
      100%
    • Coverage
      81.57%
    • Alignment (schematic)

      SEQ ID NO 10
      81.57% cov
      CAA75199
      100% cov
    • Alignment Length
      478 aa
    • CIGAR string
      108H478M mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
7 times in PatSeqDB
Tools
PatSeq Finder

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