Identification Of Thermotolerance Genes In Yeast

  • Published: Jun 19, 2014
  • Earliest Priority: Dec 12 2012
  • Family: 6
  • Cited Works: 34
  • Cited by: 2
  • Cites: 2
  • Sequences: 4
  • Additional Info: Cited Works Full text
Data obtained from: WIPO-PCT EMBL-EBI Pat DDBJ Pat EPO Sequence Listings NCBI GenBank (EBI)
4 sequences found in this patent (in total)

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Download sequences in fasta format: 2 peptides 2 DNAs

Displaying 4 sequences

SEQ ID NO
Length
Sequence Type
Locations
Declared organism
Determined organism
Occurrence
Tools
SEQ ID NO
1
Length
1,635
Sequence Type
DNA
Locations
Claims, Fulltext
Declared organism
Saccharomyces cerevisiae (baker's yeast)
Determined organism
  • Saccharomyces cerevisiae S288c

    Saccharomyces cerevisiae S288c

    • Public DB hit
      GI:296143584
      NM_001180543
      1 of 3 hits reported for Saccharomyces cerevisiae S288c.
    • Hit length
      1,635 bp
    • E Value
      0E0
    • BLAST Score
      3,020.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      NM_001180543
      100% cov
    • Alignment Length
      1,635 bp
    • CIGAR string
      1635M mismatches: 0 - insertions: 0 - deletions: 0
  • Saccharomyces cerevisiae

    Saccharomyces cerevisiae

    • Public DB hit
      GI:817819
      Z49701
    • Hit length
      30,507 bp
    • E Value
      0E0
    • BLAST Score
      3,020.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      Z49701
      5.36% cov
    • Alignment Length
      1,635 bp
    • CIGAR string
      1635M mismatches: 0 - insertions: 0 - deletions: 0
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:116616387
      EF059070
    • Hit length
      1,635 bp
    • E Value
      0E0
    • BLAST Score
      3,003.8 bits
    • Similarity
      99.82%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      EF059070
      100% cov
    • Alignment Length
      1,635 bp
    • CIGAR string
      424MN169MN44MN995M mismatches: 3 - insertions: 0 - deletions: 0
  • Saccharomyces cerevisiae EC1118

    Saccharomyces cerevisiae EC1118

    • Public DB hit
      GI:259145041
      FN393063
    • Hit length
      1,376,149 bp
    • E Value
      0E0
    • BLAST Score
      2,941 bits
    • Similarity
      99.14%
    • Coverage
      99.94%
    • Alignment (schematic)

      SEQ ID NO 1
      99.94% cov
      FN393063
      0.12% cov
    • Alignment Length
      1,634 bp
    • CIGAR string
      254MN102MN313MN8MN173MN5MN98MN44MN233MN160MN9MN98MN66MN19MN38M1H mismatches: 14 - insertions: 0 - deletions: 0
Occurrence
16 times in PatSeqDB
Tools
SEQ ID NO
2
Length
544
Sequence Type
peptide
Locations
Claims, Fulltext
Declared organism
Saccharomyces cerevisiae (baker's yeast)
Determined organism
Occurrence
9 times in PatSeqDB
Tools
SEQ ID NO
3
Length
1,164
Sequence Type
DNA
Locations
Fulltext
Declared organism
Saccharomyces cerevisiae (baker's yeast)
Determined organism
Occurrence
3 times in PatSeqDB
Tools
SEQ ID NO
4
Length
110
Sequence Type
peptide
Locations
Claims, Fulltext
Declared organism
Saccharomyces cerevisiae (baker's yeast)
Determined organism
  • Saccharomyces cerevisiae S288c

    Saccharomyces cerevisiae S288c

    • Public DB hit
      GI:6323305
      NP_013377
    • Hit length
      110 aa
    • E Value
      1.24E-56
    • BLAST Score
      223.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NP_013377
      100% cov
    • Alignment Length
      110 aa
    • CIGAR string
      110M mismatches: 0 - insertions: 0 - deletions: 0
  • Lachancea thermotolerans CBS 6340

    Lachancea thermotolerans CBS 6340

    • Public DB hit
      GI:255718831
      XP_002555696
    • Hit length
      108 aa
    • E Value
      1.07E-45
    • BLAST Score
      187.2 bits
    • Similarity
      92.52%
    • Coverage
      97.27%
    • Alignment (schematic)

      SEQ ID NO 4
      97.27% cov
      XP_002555696
      99.07% cov
    • Alignment Length
      107 aa
    • CIGAR string
      2HM2N4M2N2M3N2M2N19M3N37M2NM3N15MNMN2M2N2M1H mismatches: 21 - insertions: 0 - deletions: 0
  • Ashbya gossypii ATCC 10895

    Ashbya gossypii ATCC 10895

    • Public DB hit
      GI:45201373
      NP_986943
    • Hit length
      108 aa
    • E Value
      1.06E-42
    • BLAST Score
      177.2 bits
    • Similarity
      90.65%
    • Coverage
      97.27%
    • Alignment (schematic)

      SEQ ID NO 4
      97.27% cov
      NP_986943
      99.07% cov
    • Alignment Length
      107 aa
    • CIGAR string
      2HM4N2M2N2M3N2M2N14M2N2M2N19MN14MNMNM2N2M3NMN19MNMN1H mismatches: 26 - insertions: 0 - deletions: 0
  • Candida glabrata CBS 138

    Candida glabrata CBS 138

    • Public DB hit
      GI:50287515
      XP_446187
    • Hit length
      110 aa
    • E Value
      9.34E-40
    • BLAST Score
      167.2 bits
    • Similarity
      90.91%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_446187
      100% cov
    • Alignment Length
      110 aa
  • Zygosaccharomyces rouxii CBS 732

    Zygosaccharomyces rouxii CBS 732

    • Public DB hit
      GI:254582138
      XP_002497054
    • Hit length
      110 aa
    • E Value
      9.82E-39
    • BLAST Score
      163.7 bits
    • Similarity
      91.82%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_002497054
      100% cov
    • Alignment Length
      110 aa
  • Vanderwaltozyma polyspora DSM 70294

    Vanderwaltozyma polyspora DSM 70294

    • Public DB hit
      GI:156840670
      XP_001643714
    • Hit length
      109 aa
    • E Value
      3.4E-38
    • BLAST Score
      162.2 bits
    • Similarity
      92.59%
    • Coverage
      98.18%
    • Alignment (schematic)

      SEQ ID NO 4
      98.18% cov
      XP_001643714
      99.08% cov
    • Alignment Length
      108 aa
  • Meyerozyma guilliermondii ATCC 6260

    Meyerozyma guilliermondii ATCC 6260

    • Public DB hit
      GI:146421306
      XP_001486603
    • Hit length
      112 aa
    • E Value
      2.67E-36
    • BLAST Score
      155.6 bits
    • Similarity
      82.88%
    • Coverage
      95.45%
    • Alignment (schematic)

      SEQ ID NO 4
      95.45% cov
      XP_001486603
      99.11% cov
    • Alignment Length
      111 aa
  • Kluyveromyces lactis NRRL Y-1140

    Kluyveromyces lactis NRRL Y-1140

    • Public DB hit
      GI:50306997
      XP_453476
    • Hit length
      110 aa
    • E Value
      4.52E-36
    • BLAST Score
      155.2 bits
    • Similarity
      86.14%
    • Coverage
      91.82%
    • Alignment (schematic)

      SEQ ID NO 4
      91.82% cov
      XP_453476
      91.82% cov
    • Alignment Length
      101 aa
  • Scheffersomyces stipitis CBS 6054

    Scheffersomyces stipitis CBS 6054

    • Public DB hit
      GI:126137433
      XP_001385240
    • Hit length
      112 aa
    • E Value
      5.57E-35
    • BLAST Score
      151.4 bits
    • Similarity
      81.98%
    • Coverage
      95.45%
    • Alignment (schematic)

      SEQ ID NO 4
      95.45% cov
      XP_001385240
      99.11% cov
    • Alignment Length
      111 aa
  • Debaryomyces hansenii CBS767

    Debaryomyces hansenii CBS767

    • Public DB hit
      GI:50423747
      XP_460458
    • Hit length
      115 aa
    • E Value
      2.03E-34
    • BLAST Score
      149.4 bits
    • Similarity
      82.88%
    • Coverage
      95.45%
    • Alignment (schematic)

      SEQ ID NO 4
      95.45% cov
      XP_460458
      96.52% cov
    • Alignment Length
      111 aa
  • Komagataella pastoris GS115

    Komagataella pastoris GS115

    • Public DB hit
      GI:254566467
      XP_002490344
    • Hit length
      124 aa
    • E Value
      7.66E-34
    • BLAST Score
      147.5 bits
    • Similarity
      83.65%
    • Coverage
      94.55%
    • Alignment (schematic)

      SEQ ID NO 4
      94.55% cov
      XP_002490344
      83.87% cov
    • Alignment Length
      104 aa
  • Komagataella pastoris CBS 7435

    Komagataella pastoris CBS 7435

    • Public DB hit
      GI:328350738
      CCA37138
    • Hit length
      108 aa
    • E Value
      1.89E-33
    • BLAST Score
      146.4 bits
    • Similarity
      83.65%
    • Coverage
      94.55%
    • Alignment (schematic)

      SEQ ID NO 4
      94.55% cov
      CCA37138
      96.3% cov
    • Alignment Length
      104 aa
  • Lodderomyces elongisporus NRRL YB-4239

    Lodderomyces elongisporus NRRL YB-4239

    • Public DB hit
      GI:149245030
      XP_001527049
    • Hit length
      110 aa
    • E Value
      3.08E-33
    • BLAST Score
      145.6 bits
    • Similarity
      79.09%
    • Coverage
      95.45%
    • Alignment (schematic)

      SEQ ID NO 4
      95.45% cov
      XP_001527049
      99.09% cov
    • Alignment Length
      110 aa
Occurrence
42 times in PatSeqDB
Tools

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