Abcg8 Vectors, Host Cells, And Method Of Making

  • Published: Nov 23, 2004
  • Earliest Priority: Nov 20 2000
  • Family: 5
  • Cited Works: 34
  • Cited by: 3
  • Cites: 3
  • Sequences: 13
  • Additional Info: Cited Works Full text
Data obtained from: EMBL-EBI Pat DDBJ Pat NCBI GenBank
13 sequences found in this patent (in total)

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Download sequences in fasta format: 7 peptides 6 DNAs

Displaying 1 - 10 of 13 sequences

SEQ ID NO
Length
Sequence Type
Locations
Declared organism
Determined organism
Occurrence
Tools
SEQ ID NO
1
Length
1,959
Sequence Type
DNA
Locations
Detailed Description, Summary
Declared organism
Not specified
Determined organism
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:115527406
      BC106766
      1 of 6 hits reported for Mus musculus.
    • Hit length
      2,133 bp
    • E Value
      0E0
    • BLAST Score
      3,613.2 bits
    • Similarity
      99.95%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      BC106766
      91.84% cov
    • Alignment Length
      1,959 bp
    • CIGAR string
      1060MN898M mismatches: 1 - insertions: 0 - deletions: 0
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:26024222
      NM_053754
    • Hit length
      2,470 bp
    • E Value
      0E0
    • BLAST Score
      2,688 bits
    • Similarity
      91.45%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      NM_053754
      79.31% cov
    • Alignment Length
      1,965 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:109102755
      XM_001111277
    • Hit length
      2,739 bp
    • E Value
      0E0
    • BLAST Score
      1,685.3 bits
    • Similarity
      83.28%
    • Coverage
      94.49%
    • Alignment (schematic)

      SEQ ID NO 1
      94.49% cov
      XM_001111277
      67.58% cov
    • Alignment Length
      1,872 bp
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332227313
      XM_003262791
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      2,738 bp
    • E Value
      0E0
    • BLAST Score
      1,642.8 bits
    • Similarity
      82.41%
    • Coverage
      97.4%
    • Alignment (schematic)

      SEQ ID NO 1
      97.4% cov
      XM_003262791
      69.58% cov
    • Alignment Length
      1,927 bp
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:14141174
      NM_022436
      1 of 3 hits reported for Homo sapiens.
    • Hit length
      2,740 bp
    • E Value
      0E0
    • BLAST Score
      1,642.8 bits
    • Similarity
      82.44%
    • Coverage
      97.4%
    • Alignment (schematic)

      SEQ ID NO 1
      97.4% cov
      NM_022436
      69.53% cov
    • Alignment Length
      1,930 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:225000059
      BC172287
    • Hit length
      2,017 bp
    • E Value
      0E0
    • BLAST Score
      1,640.9 bits
    • Similarity
      82.45%
    • Coverage
      97.19%
    • Alignment (schematic)

      SEQ ID NO 1
      97.19% cov
      BC172287
      94.25% cov
    • Alignment Length
      1,926 bp
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:149727954
      XM_001498908
    • Hit length
      1,959 bp
    • E Value
      0E0
    • BLAST Score
      1,629.9 bits
    • Similarity
      82.71%
    • Coverage
      94.64%
    • Alignment (schematic)

      SEQ ID NO 1
      94.64% cov
      XM_001498908
      94.69% cov
    • Alignment Length
      1,874 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296223983
      XM_002757809
    • Hit length
      1,956 bp
    • E Value
      0E0
    • BLAST Score
      1,628 bits
    • Similarity
      82.89%
    • Coverage
      93.82%
    • Alignment (schematic)

      SEQ ID NO 1
      93.82% cov
      XM_002757809
      93.97% cov
    • Alignment Length
      1,864 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297667734
      XM_002812078
    • Hit length
      2,743 bp
    • E Value
      0E0
    • BLAST Score
      1,626.2 bits
    • Similarity
      82.27%
    • Coverage
      97.4%
    • Alignment (schematic)

      SEQ ID NO 1
      97.4% cov
      XM_002812078
      69.45% cov
    • Alignment Length
      1,929 bp
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301753209
      XM_002912435
    • Hit length
      1,959 bp
    • E Value
      0E0
    • BLAST Score
      1,616.9 bits
    • Similarity
      82.58%
    • Coverage
      94.74%
    • Alignment (schematic)

      SEQ ID NO 1
      94.74% cov
      XM_002912435
      94.74% cov
    • Alignment Length
      1,877 bp
Occurrence
3 times in PatSeqDB
Tools
SEQ ID NO
2
Length
652
Sequence Type
peptide
Locations
Detailed Description, Summary
Declared organism
Not specified
Determined organism
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:14141178
      NP_114090
      1 of 2 hits reported for Mus musculus.
    • Hit length
      652 aa
    • E Value
      0E0
    • BLAST Score
      1,343.6 bits
    • Similarity
      99.85%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NP_114090
      100% cov
    • Alignment Length
      652 aa
    • CIGAR string
      353MN298M mismatches: 1 - insertions: 0 - deletions: 0
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:26024223
      NP_446206
    • Hit length
      652 aa
    • E Value
      0E0
    • BLAST Score
      1,258.4 bits
    • Similarity
      96.63%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NP_446206
      100% cov
    • Alignment Length
      652 aa
    • CIGAR string
      MN14MN4MN4MN5MN9MN2MN21MN13MN47MN2MN24M2N6MN6MN14MN42MN5MN5MN15MN68MN2M2N3MN9MNMN12MN5MN18MN25MN47MN11MN4M2N45MN29MN40M2NMN3M2N3MN15MN6MN3MN5MNMN10M mismatches: 47 - insertions: 0 - deletions: 0
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296223984
      XP_002757855
    • Hit length
      651 aa
    • E Value
      0E0
    • BLAST Score
      1,118.2 bits
    • Similarity
      90.8%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_002757855
      100% cov
    • Alignment Length
      652 aa
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:109102756
      XP_001111277
    • Hit length
      651 aa
    • E Value
      0E0
    • BLAST Score
      1,112.1 bits
    • Similarity
      90.64%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_001111277
      100% cov
    • Alignment Length
      652 aa
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332227314
      XP_003262839
    • Hit length
      651 aa
    • E Value
      0E0
    • BLAST Score
      1,111.7 bits
    • Similarity
      90.34%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_003262839
      100% cov
    • Alignment Length
      652 aa
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:11967969
      NP_071881
    • Hit length
      651 aa
    • E Value
      0E0
    • BLAST Score
      1,099 bits
    • Similarity
      90.03%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NP_071881
      100% cov
    • Alignment Length
      652 aa
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297667735
      XP_002812124
    • Hit length
      651 aa
    • E Value
      0E0
    • BLAST Score
      1,097 bits
    • Similarity
      89.88%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_002812124
      100% cov
    • Alignment Length
      652 aa
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301753210
      XP_002912481
    • Hit length
      652 aa
    • E Value
      0E0
    • BLAST Score
      1,094.7 bits
    • Similarity
      88.34%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_002912481
      100% cov
    • Alignment Length
      652 aa
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:57093303
      XP_538475
    • Hit length
      652 aa
    • E Value
      0E0
    • BLAST Score
      1,091.6 bits
    • Similarity
      87.58%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_538475
      100% cov
    • Alignment Length
      652 aa
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:149727955
      XP_001498958
    • Hit length
      652 aa
    • E Value
      0E0
    • BLAST Score
      1,083.9 bits
    • Similarity
      88.34%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_001498958
      100% cov
    • Alignment Length
      652 aa
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:335285567
      XP_003125248
    • Hit length
      652 aa
    • E Value
      0E0
    • BLAST Score
      1,078.2 bits
    • Similarity
      88.34%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_003125248
      100% cov
    • Alignment Length
      652 aa
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:296482586
      DAA24701
      1 of 2 hits reported for Bos taurus.
    • Hit length
      649 aa
    • E Value
      0E0
    • BLAST Score
      1,075.1 bits
    • Similarity
      87.73%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      DAA24701
      100% cov
    • Alignment Length
      652 aa
Occurrence
14 times in PatSeqDB
Tools
SEQ ID NO
3
Length
2,019
Sequence Type
DNA
Locations
Detailed Description, Summary
Declared organism
Not specified
Determined organism
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:219518605
      BC145293
      1 of 8 hits reported for Mus musculus.
    • Hit length
      2,755 bp
    • E Value
      0E0
    • BLAST Score
      3,729.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      BC145293
      73.28% cov
    • Alignment Length
      2,019 bp
    • CIGAR string
      2019M mismatches: 0 - insertions: 0 - deletions: 0
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:26080337
      NM_130414
    • Hit length
      4,829 bp
    • E Value
      0E0
    • BLAST Score
      2,721.2 bits
    • Similarity
      91.01%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NM_130414
      41.81% cov
    • Alignment Length
      2,024 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297265900
      XM_001111321
    • Hit length
      2,358 bp
    • E Value
      0E0
    • BLAST Score
      1,812.7 bits
    • Similarity
      83.49%
    • Coverage
      97.47%
    • Alignment (schematic)

      SEQ ID NO 3
      97.47% cov
      XM_001111321
      83.46% cov
    • Alignment Length
      1,993 bp
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332813380
      XM_525745
    • Hit length
      3,571 bp
    • E Value
      0E0
    • BLAST Score
      1,809 bits
    • Similarity
      83.49%
    • Coverage
      97.47%
    • Alignment (schematic)

      SEQ ID NO 3
      97.47% cov
      XM_525745
      55.19% cov
    • Alignment Length
      1,999 bp
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:219519464
      BC143564
      1 of 6 hits reported for Homo sapiens.
    • Hit length
      2,143 bp
    • E Value
      0E0
    • BLAST Score
      1,807.1 bits
    • Similarity
      83.53%
    • Coverage
      97.03%
    • Alignment (schematic)

      SEQ ID NO 3
      97.03% cov
      BC143564
      91.41% cov
    • Alignment Length
      1,986 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:313883519
      HQ258492
    • Hit length
      2,056 bp
    • E Value
      0E0
    • BLAST Score
      1,799.8 bits
    • Similarity
      83.5%
    • Coverage
      96.93%
    • Alignment (schematic)

      SEQ ID NO 3
      96.93% cov
      HQ258492
      95.33% cov
    • Alignment Length
      1,988 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296223981
      XM_002757808
    • Hit length
      2,019 bp
    • E Value
      0E0
    • BLAST Score
      1,790.5 bits
    • Similarity
      83.34%
    • Coverage
      97.47%
    • Alignment (schematic)

      SEQ ID NO 3
      97.47% cov
      XM_002757808
      97.47% cov
    • Alignment Length
      1,999 bp
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332227315
      XM_003262792
    • Hit length
      3,289 bp
    • E Value
      0E0
    • BLAST Score
      1,775.8 bits
    • Similarity
      83.21%
    • Coverage
      97.47%
    • Alignment (schematic)

      SEQ ID NO 3
      97.47% cov
      XM_003262792
      59.93% cov
    • Alignment Length
      2,001 bp
Occurrence
3 times in PatSeqDB
Tools
SEQ ID NO
4
Length
672
Sequence Type
peptide
Locations
Detailed Description, Summary
Declared organism
Not specified
Determined organism
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:31322262
      AAO45096
      1 of 6 hits reported for Mus musculus.
    • Hit length
      672 aa
    • E Value
      0E0
    • BLAST Score
      1,392.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      AAO45096
      100% cov
    • Alignment Length
      672 aa
    • CIGAR string
      672M mismatches: 0 - insertions: 0 - deletions: 0
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:26080338
      NP_569098
      1 of 2 hits reported for Rattus norvegicus.
    • Hit length
      672 aa
    • E Value
      0E0
    • BLAST Score
      1,283.5 bits
    • Similarity
      95.54%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NP_569098
      100% cov
    • Alignment Length
      672 aa
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297265901
      XP_001111321
    • Hit length
      672 aa
    • E Value
      0E0
    • BLAST Score
      1,158.3 bits
    • Similarity
      89.9%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_001111321
      100% cov
    • Alignment Length
      673 aa
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301753212
      XP_002912447
    • Hit length
      671 aa
    • E Value
      0E0
    • BLAST Score
      1,148.7 bits
    • Similarity
      89%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_002912447
      100% cov
    • Alignment Length
      673 aa
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:119620690
      EAX00285
      1 of 6 hits reported for Homo sapiens.
    • Hit length
      673 aa
    • E Value
      0E0
    • BLAST Score
      1,139.8 bits
    • Similarity
      89.6%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      EAX00285
      100% cov
    • Alignment Length
      673 aa
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:114577186
      XP_525745
    • Hit length
      673 aa
    • E Value
      0E0
    • BLAST Score
      1,139 bits
    • Similarity
      89.45%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_525745
      100% cov
    • Alignment Length
      673 aa
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332227316
      XP_003262840
    • Hit length
      673 aa
    • E Value
      0E0
    • BLAST Score
      1,137.9 bits
    • Similarity
      89.3%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_003262840
      100% cov
    • Alignment Length
      673 aa
Occurrence
4 times in PatSeqDB
Tools
SEQ ID NO
5
Length
2,340
Sequence Type
DNA
Locations
Detailed Description, Summary
Declared organism
Not specified
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:14141174
      NM_022436
      1 of 2 hits reported for Homo sapiens.
    • Hit length
      2,740 bp
    • E Value
      0E0
    • BLAST Score
      4,322.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NM_022436
      85.4% cov
    • Alignment Length
      2,340 bp
    • CIGAR string
      2340M mismatches: 0 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297667734
      XM_002812078
    • Hit length
      2,743 bp
    • E Value
      0E0
    • BLAST Score
      4,047.1 bits
    • Similarity
      97.87%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XM_002812078
      85.42% cov
    • Alignment Length
      2,345 bp
    • CIGAR string
      31MN33MN33MN41MN102MN41MN31MN11MN27MN192MN41MN95M2N23MN23MN23MN39M2N10MN106MN11MN47MN112MN173MN15MN43MDMI13MN21MN47MN20MN35MN44MN75MN5MN328MN191MN38MN47MN6MN42MN3MN9MN10MD9MN10MN22MIM2IMI14M mismatches: 43 - insertions: 5 - deletions: 2
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332227313
      XM_003262791
    • Hit length
      2,738 bp
    • E Value
      0E0
    • BLAST Score
      3,999.1 bits
    • Similarity
      97.53%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XM_003262791
      85.39% cov
    • Alignment Length
      2,346 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:109102755
      XM_001111277
    • Hit length
      2,739 bp
    • E Value
      0E0
    • BLAST Score
      3,781.2 bits
    • Similarity
      95.82%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XM_001111277
      85.51% cov
    • Alignment Length
      2,347 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:225000059
      BC172287
    • Hit length
      2,017 bp
    • E Value
      0E0
    • BLAST Score
      3,613.2 bits
    • Similarity
      100%
    • Coverage
      83.59%
    • Alignment (schematic)

      SEQ ID NO 5
      83.59% cov
      BC172287
      96.98% cov
    • Alignment Length
      1,956 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296223983
      XM_002757809
    • Hit length
      1,956 bp
    • E Value
      0E0
    • BLAST Score
      3,081.3 bits
    • Similarity
      95.1%
    • Coverage
      83.59%
    • Alignment (schematic)

      SEQ ID NO 5
      83.59% cov
      XM_002757809
      100% cov
    • Alignment Length
      1,960 bp
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:149727954
      XM_001498908
    • Hit length
      1,959 bp
    • E Value
      0E0
    • BLAST Score
      2,346.4 bits
    • Similarity
      88.39%
    • Coverage
      83.59%
    • Alignment (schematic)

      SEQ ID NO 5
      83.59% cov
      XM_001498908
      100% cov
    • Alignment Length
      1,973 bp
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:73970112
      XM_538475
    • Hit length
      1,959 bp
    • E Value
      0E0
    • BLAST Score
      2,278 bits
    • Similarity
      88.21%
    • Coverage
      81.75%
    • Alignment (schematic)

      SEQ ID NO 5
      81.75% cov
      XM_538475
      97.81% cov
    • Alignment Length
      1,926 bp
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301753209
      XM_002912435
    • Hit length
      1,959 bp
    • E Value
      0E0
    • BLAST Score
      2,268.8 bits
    • Similarity
      87.69%
    • Coverage
      83.59%
    • Alignment (schematic)

      SEQ ID NO 5
      83.59% cov
      XM_002912435
      100% cov
    • Alignment Length
      1,974 bp
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:66792877
      NM_001024547
    • Hit length
      2,092 bp
    • E Value
      0E0
    • BLAST Score
      2,170.9 bits
    • Similarity
      85.83%
    • Coverage
      88.33%
    • Alignment (schematic)

      SEQ ID NO 5
      88.33% cov
      NM_001024547
      98.42% cov
    • Alignment Length
      2,089 bp
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:335285566
      XM_003125200
    • Hit length
      1,959 bp
    • E Value
      0E0
    • BLAST Score
      2,124.8 bits
    • Similarity
      86.81%
    • Coverage
      81.79%
    • Alignment (schematic)

      SEQ ID NO 5
      81.79% cov
      XM_003125200
      97.86% cov
    • Alignment Length
      1,934 bp
Occurrence
12 times in PatSeqDB
Tools
SEQ ID NO
6
Length
651
Sequence Type
peptide
Locations
Detailed Description, Drawings, Summary
Declared organism
Not specified
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:11967969
      NP_071881
      1 of 2 hits reported for Homo sapiens.
    • Hit length
      651 aa
    • E Value
      0E0
    • BLAST Score
      1,341.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NP_071881
      100% cov
    • Alignment Length
      651 aa
    • CIGAR string
      651M mismatches: 0 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297667735
      XP_002812124
    • Hit length
      651 aa
    • E Value
      0E0
    • BLAST Score
      1,314.7 bits
    • Similarity
      98.92%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XP_002812124
      100% cov
    • Alignment Length
      651 aa
    • CIGAR string
      46MN13MN23MN63MN13MN31MN37MN3MN92MN57MN19MN4MN82MN155M mismatches: 13 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332227314
      XP_003262839
    • Hit length
      651 aa
    • E Value
      0E0
    • BLAST Score
      1,307 bits
    • Similarity
      98.62%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XP_003262839
      100% cov
    • Alignment Length
      651 aa
    • CIGAR string
      32MN65MN4MNMN42MN13MN25MN5MN37MN10MN40M2N53MN47MN19MN80MN34MN86MN40M mismatches: 18 - insertions: 0 - deletions: 0
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:109102756
      XP_001111277
    • Hit length
      651 aa
    • E Value
      0E0
    • BLAST Score
      1,269.2 bits
    • Similarity
      96.93%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XP_001111277
      100% cov
    • Alignment Length
      651 aa
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296223984
      XP_002757855
    • Hit length
      651 aa
    • E Value
      0E0
    • BLAST Score
      1,263.1 bits
    • Similarity
      97.24%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XP_002757855
      100% cov
    • Alignment Length
      651 aa
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301753210
      XP_002912481
    • Hit length
      652 aa
    • E Value
      0E0
    • BLAST Score
      1,153.7 bits
    • Similarity
      92.18%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XP_002912481
      100% cov
    • Alignment Length
      652 aa
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:57093303
      XP_538475
    • Hit length
      652 aa
    • E Value
      0E0
    • BLAST Score
      1,146.3 bits
    • Similarity
      91.26%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XP_538475
      100% cov
    • Alignment Length
      652 aa
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:335285567
      XP_003125248
    • Hit length
      652 aa
    • E Value
      0E0
    • BLAST Score
      1,142.5 bits
    • Similarity
      92.02%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XP_003125248
      100% cov
    • Alignment Length
      652 aa
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:149727955
      XP_001498958
    • Hit length
      652 aa
    • E Value
      0E0
    • BLAST Score
      1,138.3 bits
    • Similarity
      91.1%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XP_001498958
      100% cov
    • Alignment Length
      652 aa
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:66792878
      NP_001019718
      1 of 3 hits reported for Bos taurus.
    • Hit length
      649 aa
    • E Value
      0E0
    • BLAST Score
      1,112.8 bits
    • Similarity
      89.25%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NP_001019718
      100% cov
    • Alignment Length
      651 aa
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:14141178
      NP_114090
    • Hit length
      652 aa
    • E Value
      0E0
    • BLAST Score
      1,097.8 bits
    • Similarity
      89.88%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NP_114090
      100% cov
    • Alignment Length
      652 aa
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:26024223
      NP_446206
    • Hit length
      652 aa
    • E Value
      0E0
    • BLAST Score
      1,092 bits
    • Similarity
      89.72%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NP_446206
      100% cov
    • Alignment Length
      652 aa
Occurrence
68 times in PatSeqDB
Tools
SEQ ID NO
7
Length
2,669
Sequence Type
DNA
Locations
Claims, Detailed Description, Summary
Declared organism
Not specified
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:34452700
      NM_022437
      1 of 5 hits reported for Homo sapiens.
    • Hit length
      2,679 bp
    • E Value
      0E0
    • BLAST Score
      4,907.7 bits
    • Similarity
      99.96%
    • Coverage
      99.66%
    • Alignment (schematic)

      SEQ ID NO 7
      99.66% cov
      NM_022437
      99.29% cov
    • Alignment Length
      2,660 bp
    • CIGAR string
      9H1984MN675M mismatches: 1 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332813380
      XM_525745
    • Hit length
      3,571 bp
    • E Value
      0E0
    • BLAST Score
      4,783.9 bits
    • Similarity
      99.17%
    • Coverage
      99.66%
    • Alignment (schematic)

      SEQ ID NO 7
      99.66% cov
      XM_525745
      74.26% cov
    • Alignment Length
      2,660 bp
    • CIGAR string
      9H71MN23MN338MN140MN401MN171MN7MN131MN84MN115MN37MN277MN188MN399M2DM2DM4D41MN213M mismatches: 14 - insertions: 0 - deletions: 8
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332227315
      XM_003262792
    • Hit length
      3,289 bp
    • E Value
      0E0
    • BLAST Score
      4,494 bits
    • Similarity
      97.15%
    • Coverage
      99.63%
    • Alignment (schematic)

      SEQ ID NO 7
      99.63% cov
      XM_003262792
      80.97% cov
    • Alignment Length
      2,663 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297265900
      XM_001111321
    • Hit length
      2,358 bp
    • E Value
      0E0
    • BLAST Score
      3,810.8 bits
    • Similarity
      95.85%
    • Coverage
      88.31%
    • Alignment (schematic)

      SEQ ID NO 7
      88.31% cov
      XM_001111321
      100% cov
    • Alignment Length
      2,362 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:313883519
      HQ258492
    • Hit length
      2,056 bp
    • E Value
      0E0
    • BLAST Score
      3,731.4 bits
    • Similarity
      99.9%
    • Coverage
      75.91%
    • Alignment (schematic)

      SEQ ID NO 7
      75.91% cov
      HQ258492
      98.54% cov
    • Alignment Length
      2,026 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296223981
      XM_002757808
    • Hit length
      2,019 bp
    • E Value
      0E0
    • BLAST Score
      3,094.3 bits
    • Similarity
      94.33%
    • Coverage
      75.76%
    • Alignment (schematic)

      SEQ ID NO 7
      75.76% cov
      XM_002757808
      100% cov
    • Alignment Length
      2,028 bp
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:73970113
      XM_531799
    • Hit length
      2,577 bp
    • E Value
      0E0
    • BLAST Score
      2,239.3 bits
    • Similarity
      83.22%
    • Coverage
      93.74%
    • Alignment (schematic)

      SEQ ID NO 7
      93.74% cov
      XM_531799
      96.9% cov
    • Alignment Length
      2,557 bp
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301753211
      XM_002912401
    • Hit length
      2,206 bp
    • E Value
      0E0
    • BLAST Score
      2,222.6 bits
    • Similarity
      85.08%
    • Coverage
      82.84%
    • Alignment (schematic)

      SEQ ID NO 7
      82.84% cov
      XM_002912401
      100% cov
    • Alignment Length
      2,245 bp
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:194220768
      XM_001498893
    • Hit length
      2,016 bp
    • E Value
      0E0
    • BLAST Score
      2,183.9 bits
    • Similarity
      86.34%
    • Coverage
      75.76%
    • Alignment (schematic)

      SEQ ID NO 7
      75.76% cov
      XM_001498893
      100% cov
    • Alignment Length
      2,043 bp
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:66954663
      NM_001024663
    • Hit length
      2,182 bp
    • E Value
      0E0
    • BLAST Score
      2,152.5 bits
    • Similarity
      84.69%
    • Coverage
      82.24%
    • Alignment (schematic)

      SEQ ID NO 7
      82.24% cov
      NM_001024663
      100% cov
    • Alignment Length
      2,227 bp
Occurrence
3 times in PatSeqDB
Tools
SEQ ID NO
8
Length
673
Sequence Type
peptide
Locations
Claims, Detailed Description, Drawings, Summary
Declared organism
Not specified
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:119620690
      EAX00285
      1 of 6 hits reported for Homo sapiens.
    • Hit length
      673 aa
    • E Value
      0E0
    • BLAST Score
      1,392.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      EAX00285
      100% cov
    • Alignment Length
      673 aa
    • CIGAR string
      673M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:114577186
      XP_525745
    • Hit length
      673 aa
    • E Value
      0E0
    • BLAST Score
      1,380.2 bits
    • Similarity
      99.55%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XP_525745
      100% cov
    • Alignment Length
      673 aa
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332227316
      XP_003262840
    • Hit length
      673 aa
    • E Value
      0E0
    • BLAST Score
      1,344.7 bits
    • Similarity
      98.81%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XP_003262840
      100% cov
    • Alignment Length
      673 aa
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297265901
      XP_001111321
    • Hit length
      672 aa
    • E Value
      0E0
    • BLAST Score
      1,327.4 bits
    • Similarity
      96.73%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XP_001111321
      100% cov
    • Alignment Length
      673 aa
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296223982
      XP_002757854
    • Hit length
      672 aa
    • E Value
      0E0
    • BLAST Score
      1,292.7 bits
    • Similarity
      95.39%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XP_002757854
      100% cov
    • Alignment Length
      673 aa
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301753212
      XP_002912447
      1 of 2 hits reported for Ailuropoda melanoleuca.
    • Hit length
      671 aa
    • E Value
      0E0
    • BLAST Score
      1,179.5 bits
    • Similarity
      91.08%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XP_002912447
      100% cov
    • Alignment Length
      673 aa
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:148706636
      EDL38583
      1 of 4 hits reported for Mus musculus.
    • Hit length
      672 aa
    • E Value
      0E0
    • BLAST Score
      1,154 bits
    • Similarity
      89.6%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      EDL38583
      100% cov
    • Alignment Length
      673 aa
  • Oryctolagus cuniculus

    Oryctolagus cuniculus

    • Public DB hit
      GI:291386865
      XP_002709782
    • Hit length
      673 aa
    • E Value
      0E0
    • BLAST Score
      1,151 bits
    • Similarity
      91.38%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XP_002709782
      100% cov
    • Alignment Length
      673 aa
Occurrence
7 times in PatSeqDB
Tools
SEQ ID NO
9
Length
6,043
Sequence Type
DNA
Locations
Claims, Drawings
Declared organism
Not specified
Determined organism
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:83423678
      AC165360
      1 of 15 hits reported for Mus musculus.
    • Hit length
      217,732 bp
    • E Value
      0E0
    • BLAST Score
      11,079.2 bits
    • Similarity
      99.75%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      AC165360
      2.77% cov
    • Alignment Length
      6,044 bp
    • CIGAR string
      2726MD21M2D17MD4MI278MD62MD15MD488MN13MD1103MNMN44MN24MN512MD721M mismatches: 5 - insertions: 1 - deletions: 9
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:24935208
      AY145899
      1 of 2 hits reported for Rattus norvegicus.
    • Hit length
      40,929 bp
    • E Value
      0E0
    • BLAST Score
      1,504.3 bits
    • Similarity
      83.11%
    • Coverage
      28.38%
    • Alignment (schematic)

      SEQ ID NO 9
      28.38% cov
      AY145899
      4.25% cov
    • Alignment Length
      1,806 bp
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:210033032
      NG_008884
      1 of 6 hits reported for Homo sapiens.
    • Hit length
      46,503 bp
    • E Value
      9.89E-72
    • BLAST Score
      283.7 bits
    • Similarity
      85.03%
    • Coverage
      4.63%
    • Alignment (schematic)

      SEQ ID NO 9
      4.63% cov
      NG_008884
      0.63% cov
    • Alignment Length
      294 bp
Occurrence
3 times in PatSeqDB
Tools
SEQ ID NO
10
Length
359
Sequence Type
DNA
Locations
Drawings
Declared organism
Not specified
Determined organism
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:15150321
      AF404108
      1 of 4 hits reported for Mus musculus.
    • Hit length
      567 bp
    • E Value
      0E0
    • BLAST Score
      653 bits
    • Similarity
      99.44%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      AF404108
      63.14% cov
    • Alignment Length
      359 bp
    • CIGAR string
      120MN13MD224M mismatches: 1 - insertions: 0 - deletions: 1
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:15150324
      AF404109
      1 of 2 hits reported for Rattus norvegicus.
    • Hit length
      588 bp
    • E Value
      1.85E-107
    • BLAST Score
      398.1 bits
    • Similarity
      89.56%
    • Coverage
      86.91%
    • Alignment (schematic)

      SEQ ID NO 10
      86.91% cov
      AF404109
      53.4% cov
    • Alignment Length
      316 bp
Occurrence
3 times in PatSeqDB
Tools

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