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Search for Biological Sequences disclosed in Patents

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Data obtained from: DDBJ Pat NCBI GenBank USPTO Fulltext EMBL-EBI Pat
2 sequences found in this patent (in total)

Displaying 2 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
58
Type
nucleotide
Locations
Detailed Description

Declared organism:
Escherichia coli

Determined organism:
  • Cloning vector pO6T

    Cloning vector pO6T

    • Public DB hit
      GI:112819934
      DQ867321
    • Hit length
      2,558 bp
    • E Value
      3.09E-21
    • BLAST Score
      108.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      DQ867321
      2.27% cov
    • Alignment Length
      58 bp
    • CIGAR string
      58M mismatches: 0 - insertions: 0 - deletions: 0
  • Cloning vector pTrypRNAiGate

    Cloning vector pTrypRNAiGate

    • Public DB hit
      GI:334854400
      JF748716
    • Hit length
      9,177 bp
    • E Value
      1.87E-13
    • BLAST Score
      82.4 bits
    • Similarity
      100%
    • Coverage
      75.86%
    • Alignment (schematic)

      SEQ ID NO 1
      75.86% cov
      JF748716
      0.48% cov
    • Alignment Length
      44 bp
    • CIGAR string
      3H44M11H mismatches: 0 - insertions: 0 - deletions: 0
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:229559734
      FJ848990
    • Hit length
      191 bp
    • E Value
      8.72E-12
    • BLAST Score
      76.8 bits
    • Similarity
      100%
    • Coverage
      70.69%
    • Alignment (schematic)

      SEQ ID NO 1
      70.69% cov
      FJ848990
      21.47% cov
    • Alignment Length
      41 bp
    • CIGAR string
      5H41M12H mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
12 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
207
Type
peptide
Locations
Detailed Description

Declared organism:
Escherichia coli

Determined organism:
  • Expression vector pDM309

    Expression vector pDM309

    • Public DB hit
      GI:196968542
      ACG80850
    • Hit length
      335 aa
    • E Value
      4.07E-118
    • BLAST Score
      428.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      ACG80850
      61.79% cov
    • Alignment Length
      207 aa
    • CIGAR string
      207M mismatches: 0 - insertions: 0 - deletions: 0
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:89277221
      ABD66750
      1 of 5 hits reported for synthetic construct.
    • Hit length
      255 aa
    • E Value
      5.45E-118
    • BLAST Score
      427.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      ABD66750
      81.18% cov
    • Alignment Length
      207 aa
    • CIGAR string
      207M mismatches: 0 - insertions: 0 - deletions: 0
  • Salmonella enterica subsp. enterica serovar Typhi

    Salmonella enterica subsp. enterica serovar Typhi

    • Public DB hit
      GI:10957270
      NP_058294
    • Hit length
      208 aa
    • E Value
      8.92E-118
    • BLAST Score
      427.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NP_058294
      99.52% cov
    • Alignment Length
      207 aa
  • Shigella flexneri 2b

    Shigella flexneri 2b

    • Public DB hit
      GI:9507599
      NP_052930
    • Hit length
      207 aa
    • E Value
      1.12E-117
    • BLAST Score
      426.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NP_052930
      100% cov
    • Alignment Length
      207 aa
  • Retroviral vector NIT

    Retroviral vector NIT

    • Public DB hit
      GI:12082785
      AAG48612
    • Hit length
      336 aa
    • E Value
      2.21E-117
    • BLAST Score
      426 bits
    • Similarity
      100%
    • Coverage
      99.52%
    • Alignment (schematic)

      SEQ ID NO 2
      99.52% cov
      AAG48612
      61.31% cov
    • Alignment Length
      206 aa
  • Escherichia coli MS 119-7

    Escherichia coli MS 119-7

    • Public DB hit
      GI:300823293
      ZP_07103425
    • Hit length
      208 aa
    • E Value
      2.87E-117
    • BLAST Score
      425.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      ZP_07103425
      99.52% cov
    • Alignment Length
      207 aa
  • Cloning vector pdsRNA

    Cloning vector pdsRNA

    • Public DB hit
      GI:289629478
      ADD13587
    • Hit length
      214 aa
    • E Value
      1.05E-116
    • BLAST Score
      423.7 bits
    • Similarity
      100%
    • Coverage
      99.52%
    • Alignment (schematic)

      SEQ ID NO 2
      99.52% cov
      ADD13587
      96.26% cov
    • Alignment Length
      206 aa
  • Escherichia coli

    Escherichia coli

    • Public DB hit
      GI:42494906
      AAS17729
    • Hit length
      208 aa
    • E Value
      1.06E-115
    • BLAST Score
      420.2 bits
    • Similarity
      99.03%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      AAS17729
      99.52% cov
    • Alignment Length
      207 aa
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:302752605
      ADL67001
    • Hit length
      255 aa
    • E Value
      2.75E-114
    • BLAST Score
      415.6 bits
    • Similarity
      98.07%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      ADL67001
      81.18% cov
    • Alignment Length
      207 aa
  • Expression vector pDM310

    Expression vector pDM310

    • Public DB hit
      GI:196968521
      ACG80832
    • Hit length
      292 aa
    • E Value
      2.85E-114
    • BLAST Score
      415.6 bits
    • Similarity
      98.07%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      ACG80832
      70.89% cov
    • Alignment Length
      207 aa
  • Shigella flexneri 2a

    Shigella flexneri 2a

    • Public DB hit
      GI:15808715
      AAL08444
    • Hit length
      208 aa
    • E Value
      3.42E-114
    • BLAST Score
      415.2 bits
    • Similarity
      98.07%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      AAL08444
      99.52% cov
    • Alignment Length
      207 aa
  • Neisseria meningitidis

    Neisseria meningitidis

    • Public DB hit
      GI:22450184
      BAC10600
    • Hit length
      205 aa
    • E Value
      7.01E-114
    • BLAST Score
      414.5 bits
    • Similarity
      100%
    • Coverage
      97.1%
    • Alignment (schematic)

      SEQ ID NO 2
      97.1% cov
      BAC10600
      98.05% cov
    • Alignment Length
      201 aa
  • Xenopus transgenesis plasmid pDPCrtTA-TREG-HS4

    Xenopus transgenesis plasmid pDPCrtTA-TREG-HS4

    • Public DB hit
      GI:330368227
      AEC11551
    • Hit length
      254 aa
    • E Value
      1.19E-113
    • BLAST Score
      413.7 bits
    • Similarity
      97.58%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      AEC11551
      81.5% cov
    • Alignment Length
      207 aa
  • Expression vector peTetOn(PacI)

    Expression vector peTetOn(PacI)

    • Public DB hit
      GI:84795125
      ABC65842
    • Hit length
      248 aa
    • E Value
      1.31E-113
    • BLAST Score
      413.3 bits
    • Similarity
      97.58%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      ABC65842
      83.47% cov
    • Alignment Length
      207 aa
  • Expression vector pTGPI-GFP

    Expression vector pTGPI-GFP

    • Public DB hit
      GI:57639623
      AAW55665
    • Hit length
      218 aa
    • E Value
      1.4E-113
    • BLAST Score
      413.3 bits
    • Similarity
      100%
    • Coverage
      97.1%
    • Alignment (schematic)

      SEQ ID NO 2
      97.1% cov
      AAW55665
      92.2% cov
    • Alignment Length
      201 aa
  • Retroviral Tet-shRNA expression vector TRMPVIR

    Retroviral Tet-shRNA expression vector TRMPVIR

    • Public DB hit
      GI:313652102
      ADR71685
    • Hit length
      248 aa
    • E Value
      3.23E-113
    • BLAST Score
      412.1 bits
    • Similarity
      97.58%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      ADR71685
      83.47% cov
    • Alignment Length
      207 aa
  • Escherichia coli K-12

    Escherichia coli K-12

    • Public DB hit
      GI:157835403
      2NS7_A
    • Hit length
      208 aa
    • E Value
      3.54E-107
    • BLAST Score
      392.1 bits
    • Similarity
      94.58%
    • Coverage
      98.07%
    • Alignment (schematic)

      SEQ ID NO 2
      98.07% cov
      2NS7_A
      97.6% cov
    • Alignment Length
      203 aa
  • Escherichia coli MS 145-7

    Escherichia coli MS 145-7

    • Public DB hit
      GI:309798380
      ZP_07692707
    • Hit length
      184 aa
    • E Value
      3.1E-104
    • BLAST Score
      382.1 bits
    • Similarity
      100%
    • Coverage
      88.89%
    • Alignment (schematic)

      SEQ ID NO 2
      88.89% cov
      ZP_07692707
      100% cov
    • Alignment Length
      184 aa
Occurrence
199 times in PatSeqDB
Tools
PatSeq Finder

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