Combined Human Papillomavirus Vlp/gene Delivery System And Use Thereof As A Vaccine For Prophylaxis And Immunotherapy Of Infectious Diseases And Tumors

  • Published: Jul 10, 2008
  • Earliest Priority: Aug 30 2006
  • Family: 4
  • Cited Works: 0
  • Cited by: 2
  • Cites: 0
  • Sequences: 13
  • Additional Info: Full text
Data obtained from: WIPO-PCT
13 sequences found in this patent (in total)

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Download sequences in fasta format: 7 peptides 6 DNAs

Displaying 1 - 10 of 13 sequences

SEQ ID NO
Length
Sequence Type
Locations
Declared organism
Determined organism
Occurrence
Tools
SEQ ID NO
1
Length
15
Sequence Type
peptide
Locations
Fulltext
Declared organism
Artificial
Determined organism
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:51860148
      AAU11324
    • Hit length
      687 aa
    • E Value
      2.64E-5
    • BLAST Score
      51.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      AAU11324
      2.18% cov
    • Alignment Length
      15 aa
    • CIGAR string
      15M mismatches: 0 - insertions: 0 - deletions: 0
  • Human immunodeficiency virus 1

    Human immunodeficiency virus 1

    • Public DB hit
      GI:37780019
      AAO83395
      1 of 21 hits reported for Human immunodeficiency virus 1.
    • Hit length
      462 aa
    • E Value
      2.97E-5
    • BLAST Score
      51.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      AAO83395
      3.25% cov
    • Alignment Length
      15 aa
    • CIGAR string
      15M mismatches: 0 - insertions: 0 - deletions: 0
  • HIV-1 vector pNL-DT5R

    HIV-1 vector pNL-DT5R

    • Public DB hit
      GI:116062033
      BAF34648
    • Hit length
      854 aa
    • E Value
      6.43E-5
    • BLAST Score
      50.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      BAF34648
      1.76% cov
    • Alignment Length
      15 aa
  • Human immunodeficiency virus type 1 (MFA ISOLATE)

    Human immunodeficiency virus type 1 (MFA ISOLATE)

    • Public DB hit
      GI:119450
      P19551
    • Hit length
      853 aa
    • E Value
      7.11E-5
    • BLAST Score
      50.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      P19551
      1.76% cov
    • Alignment Length
      15 aa
Occurrence
198 times in PatSeqDB
Tools
SEQ ID NO
2
Length
435
Sequence Type
peptide
Locations
Fulltext
Declared organism
Artificial
Determined organism
Occurrence
4 times in PatSeqDB
Tools
SEQ ID NO
3
Length
1,308
Sequence Type
DNA
Locations
Fulltext
Declared organism
Artificial
Determined organism
Occurrence
4 times in PatSeqDB
Tools
SEQ ID NO
4
Length
683
Sequence Type
peptide
Locations
Fulltext
Declared organism
Artificial
Determined organism
  • Human papillomavirus type 16

    Human papillomavirus type 16

    • Public DB hit
      GI:9627107
      NP_041331
      1 of 14 hits reported for Human papillomavirus type 16.
    • Hit length
      473 aa
    • E Value
      0E0
    • BLAST Score
      941.4 bits
    • Similarity
      100%
    • Coverage
      69.25%
    • Alignment (schematic)

      SEQ ID NO 4
      69.25% cov
      NP_041331
      100% cov
    • Alignment Length
      473 aa
    • CIGAR string
      473M210H mismatches: 0 - insertions: 0 - deletions: 0
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:15212103
      CAC51368
    • Hit length
      473 aa
    • E Value
      0E0
    • BLAST Score
      939.1 bits
    • Similarity
      100%
    • Coverage
      69.25%
    • Alignment (schematic)

      SEQ ID NO 4
      69.25% cov
      CAC51368
      100% cov
    • Alignment Length
      473 aa
    • CIGAR string
      42MN430M210H mismatches: 1 - insertions: 0 - deletions: 0
  • Human papillomavirus

    Human papillomavirus

    • Public DB hit
      GI:1098786
      AAA91687
      1 of 9 hits reported for Human papillomavirus.
    • Hit length
      461 aa
    • E Value
      0E0
    • BLAST Score
      910.6 bits
    • Similarity
      99.78%
    • Coverage
      67.5%
    • Alignment (schematic)

      SEQ ID NO 4
      67.5% cov
      AAA91687
      100% cov
    • Alignment Length
      461 aa
Occurrence
4 times in PatSeqDB
Tools
SEQ ID NO
5
Length
2,052
Sequence Type
DNA
Locations
Fulltext
Declared organism
Artificial
Determined organism
  • Human papillomavirus type 16

    Human papillomavirus type 16

    • Public DB hit
      GI:333031
      K02718
      1 of 23 hits reported for Human papillomavirus type 16.
    • Hit length
      7,904 bp
    • E Value
      0E0
    • BLAST Score
      2,625.2 bits
    • Similarity
      99.86%
    • Coverage
      69.49%
    • Alignment (schematic)

      SEQ ID NO 5
      69.49% cov
      K02718
      18.07% cov
    • Alignment Length
      1,428 bp
    • CIGAR string
      1419MIMI6M626H mismatches: 0 - insertions: 2 - deletions: 0
  • Human papillomavirus

    Human papillomavirus

    • Public DB hit
      GI:1098811
      U34152
      1 of 2 hits reported for Human papillomavirus.
    • Hit length
      1,386 bp
    • E Value
      0E0
    • BLAST Score
      2,538.4 bits
    • Similarity
      99.78%
    • Coverage
      67.4%
    • Alignment (schematic)

      SEQ ID NO 5
      67.4% cov
      U34152
      99.78% cov
    • Alignment Length
      1,383 bp
Occurrence
4 times in PatSeqDB
Tools
SEQ ID NO
6
Length
628
Sequence Type
peptide
Locations
Fulltext
Declared organism
Artificial
Determined organism
  • Oryctolagus cuniculus

    Oryctolagus cuniculus

    • Public DB hit
      GI:126723562
      NP_001075704
      1 of 2 hits reported for Oryctolagus cuniculus.
    • Hit length
      418 aa
    • E Value
      0E0
    • BLAST Score
      844 bits
    • Similarity
      100%
    • Coverage
      66.56%
    • Alignment (schematic)

      SEQ ID NO 6
      66.56% cov
      NP_001075704
      100% cov
    • Alignment Length
      418 aa
    • CIGAR string
      418M210H mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
4 times in PatSeqDB
Tools
SEQ ID NO
7
Length
1,887
Sequence Type
DNA
Locations
Fulltext
Declared organism
Artificial
Determined organism
  • Oryctolagus cuniculus

    Oryctolagus cuniculus

    • Public DB hit
      GI:126723561
      NM_001082235
    • Hit length
      1,865 bp
    • E Value
      0E0
    • BLAST Score
      2,316.8 bits
    • Similarity
      100%
    • Coverage
      66.45%
    • Alignment (schematic)

      SEQ ID NO 7
      66.45% cov
      NM_001082235
      67.24% cov
    • Alignment Length
      1,254 bp
    • CIGAR string
      1254M633H mismatches: 0 - insertions: 0 - deletions: 0
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:149756872
      XM_001504882
    • Hit length
      1,815 bp
    • E Value
      0E0
    • BLAST Score
      1,541.2 bits
    • Similarity
      89.83%
    • Coverage
      63.7%
    • Alignment (schematic)

      SEQ ID NO 7
      63.7% cov
      XM_001504882
      66.39% cov
    • Alignment Length
      1,210 bp
    • CIGAR string
      8MI3MDMN6MN11MN2MN7MN9MN4MNMN7MN17MN5MN6MN31MN5MN9MN10MN8MN5MN2MN35MN8MN15MN4MN5MN18MNMN17MN20MN5MN11MN8MN5MNM3NM2N9M2N8MN2MN5MN2MN17MN2MN11MN2MN17MN62MN26MN5MN5MN5MN42MN10MN11MN2MN11MN5MI4MD4MDMIMN5MN38MN11MN5MN11MN17MN2MN2MN11MN14MN17MN2MN17MN23MN26MN5MN11MN2MN20MD3MI2MNMIMD8MN5MN2MNMN3MN12MN4MN17MN11MN23MN11MN8MN17MN5MN3MN4MN2MN11MN21MN4MN14MN2MN8MN20M3I3MN8MN8MN2M2NMN5MN2MN2MN14M685H mismatches: 110 - insertions: 8 - deletions: 5
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:337486
      M32294
      1 of 17 hits reported for Homo sapiens.
    • Hit length
      1,890 bp
    • E Value
      0E0
    • BLAST Score
      1,487.7 bits
    • Similarity
      88.17%
    • Coverage
      66.45%
    • Alignment (schematic)

      SEQ ID NO 7
      66.45% cov
      M32294
      66.19% cov
    • Alignment Length
      1,259 bp
    • CIGAR string
      8MIN2MD20MN13MN11MN33MN8M4N26MN17MN8MN14MN2MDMI16M2N7MN8MN2MN5MN2MN2MN9MNMN8MN11MN6MNMN17MN8MN11MN5MN11MN14M5NM2N9MIMD11MN5MN2MN20MN14MN17MN59MN2MN5MN14MN5MN8MN8MN35MN6MN4MN2MN2MN11MN2MN17MN2MN5MN2MN2MN2MN11MN17MN2MN5MN11MN23MN5MN5MN2MN2MN11MN8MN5MN17MN2MN2MN14MN23MN17MN8MN5MN11MN5MN14MN2MN5MIMNMDM2N11MN2MNMN5MN10MN22MN11MN29MN5MN29MN2MN3MNMN2MN5MN2MN5MN5MN15MN4MN11MN2MN2MN5MN2MN2MN14M2D2MD5MN7M2NMN2MN5MN2MN2MN2MN2MN5MN14MN2MN2MN8MNM2NMI2MD23M633H mismatches: 136 - insertions: 5 - deletions: 8
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:168277783
      AB385014
      1 of 3 hits reported for synthetic construct.
    • Hit length
      1,268 bp
    • E Value
      0E0
    • BLAST Score
      1,482.1 bits
    • Similarity
      88.09%
    • Coverage
      66.45%
    • Alignment (schematic)

      SEQ ID NO 7
      66.45% cov
      AB385014
      98.66% cov
    • Alignment Length
      1,259 bp
Occurrence
4 times in PatSeqDB
Tools
SEQ ID NO
8
Length
383
Sequence Type
peptide
Locations
Fulltext
Declared organism
Artificial
Determined organism
  • Human papillomavirus type 16

    Human papillomavirus type 16

    • Public DB hit
      GI:9627107
      NP_041331
      1 of 19 hits reported for Human papillomavirus type 16.
    • Hit length
      473 aa
    • E Value
      1.82E-124
    • BLAST Score
      451.1 bits
    • Similarity
      98.27%
    • Coverage
      60.31%
    • Alignment (schematic)

      SEQ ID NO 8
      60.31% cov
      NP_041331
      48.84% cov
    • Alignment Length
      231 aa
    • CIGAR string
      225M4N2M152H mismatches: 4 - insertions: 0 - deletions: 0
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:15212103
      CAC51368
    • Hit length
      473 aa
    • E Value
      1.18E-103
    • BLAST Score
      382.1 bits
    • Similarity
      98.27%
    • Coverage
      60.31%
    • Alignment (schematic)

      SEQ ID NO 8
      60.31% cov
      CAC51368
      48.84% cov
    • Alignment Length
      231 aa
    • CIGAR string
      42MN182M4N2M152H mismatches: 5 - insertions: 0 - deletions: 0
Occurrence
4 times in PatSeqDB
Tools
SEQ ID NO
9
Length
1,152
Sequence Type
DNA
Locations
Fulltext
Declared organism
Artificial
Determined organism
Occurrence
4 times in PatSeqDB
Tools
SEQ ID NO
10
Length
631
Sequence Type
peptide
Locations
Fulltext
Declared organism
Artificial
Determined organism
  • Human papillomavirus type 16

    Human papillomavirus type 16

    • Public DB hit
      GI:9627107
      NP_041331
      1 of 14 hits reported for Human papillomavirus type 16.
    • Hit length
      473 aa
    • E Value
      0E0
    • BLAST Score
      941.8 bits
    • Similarity
      100%
    • Coverage
      74.96%
    • Alignment (schematic)

      SEQ ID NO 10
      74.96% cov
      NP_041331
      100% cov
    • Alignment Length
      473 aa
    • CIGAR string
      473M158H mismatches: 0 - insertions: 0 - deletions: 0
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:15212103
      CAC51368
    • Hit length
      473 aa
    • E Value
      0E0
    • BLAST Score
      940.3 bits
    • Similarity
      100%
    • Coverage
      74.96%
    • Alignment (schematic)

      SEQ ID NO 10
      74.96% cov
      CAC51368
      100% cov
    • Alignment Length
      473 aa
    • CIGAR string
      42MN430M158H mismatches: 1 - insertions: 0 - deletions: 0
  • Human papillomavirus

    Human papillomavirus

    • Public DB hit
      GI:1098786
      AAA91687
      1 of 9 hits reported for Human papillomavirus.
    • Hit length
      461 aa
    • E Value
      0E0
    • BLAST Score
      911.4 bits
    • Similarity
      99.78%
    • Coverage
      73.06%
    • Alignment (schematic)

      SEQ ID NO 10
      73.06% cov
      AAA91687
      100% cov
    • Alignment Length
      461 aa
Occurrence
4 times in PatSeqDB
Tools

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