Huntingtin Dna, Protein And Uses Thereof

Data obtained from: USPTO Fulltext EMBL-EBI Pat DDBJ Pat NCBI GenBank
25 sequences found in this patent (in total)

Filter sequences

Clear
Download sequences in fasta format: 2 peptides 23 DNAs

Displaying 1 - 10 of 25 sequences

SEQ ID NO
Length
Sequence Type
Locations
Declared organism
Determined organism
Occurrence
Tools
SEQ ID NO
1
Length
20
Sequence Type
DNA
Locations
Detailed Description, Drawings
Declared organism
Not specified
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:221136754
      NG_009378
      1 of 14 hits reported for Homo sapiens.
    • Hit length
      176,286 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      NG_009378
      0.01% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Acidiphilium multivorum AIU301

    Acidiphilium multivorum AIU301

    • Public DB hit
      GI:325049009
      AP012035
    • Hit length
      3,749,411 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      AP012035
      0% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Colobus guereza

    Colobus guereza

    • Public DB hit
      GI:209980767
      EU797073
    • Hit length
      340 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      EU797073
      5.88% cov
    • Alignment Length
      20 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:209980765
      EU797072
    • Hit length
      342 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      EU797072
      5.85% cov
    • Alignment Length
      20 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:209980759
      EU797069
      1 of 2 hits reported for Macaca mulatta.
    • Hit length
      343 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      EU797069
      5.83% cov
    • Alignment Length
      20 bp
  • Hylobates lar

    Hylobates lar

    • Public DB hit
      GI:209980757
      EU797068
    • Hit length
      344 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      EU797068
      5.81% cov
    • Alignment Length
      20 bp
  • Pongo pygmaeus

    Pongo pygmaeus

    • Public DB hit
      GI:209980753
      EU797066
    • Hit length
      338 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      EU797066
      5.92% cov
    • Alignment Length
      20 bp
  • Gorilla gorilla

    Gorilla gorilla

    • Public DB hit
      GI:209980745
      EU797062
    • Hit length
      353 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      EU797062
      5.67% cov
    • Alignment Length
      20 bp
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:209980743
      EU797061
      1 of 3 hits reported for Pan troglodytes.
    • Hit length
      349 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      EU797061
      5.73% cov
    • Alignment Length
      20 bp
Occurrence
3 times in PatSeqDB
Tools
SEQ ID NO
2
Length
17
Sequence Type
DNA
Locations
Detailed Description, Drawings
Declared organism
Not specified
Determined organism
  • Plasmodium berghei ANKA

    Plasmodium berghei ANKA

    • Public DB hit
      GI:68059336
      XM_666562
    • Hit length
      827 bp
    • E Value
      4.15E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XM_666562
      2.06% cov
    • Alignment Length
      17 bp
    • CIGAR string
      17M mismatches: 0 - insertions: 0 - deletions: 0
  • Cloning vector pFA-pHluorin-ARG4

    Cloning vector pFA-pHluorin-ARG4

    • Public DB hit
      GI:336287747
      JN051501
    • Hit length
      5,412 bp
    • E Value
      4.15E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      JN051501
      0.31% cov
    • Alignment Length
      17 bp
    • CIGAR string
      17M mismatches: 0 - insertions: 0 - deletions: 0
  • Cloning vector pFA-pHluorin-URA3

    Cloning vector pFA-pHluorin-URA3

    • Public DB hit
      GI:336287744
      JN051500
    • Hit length
      4,803 bp
    • E Value
      4.15E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      JN051500
      0.35% cov
    • Alignment Length
      17 bp
    • CIGAR string
      17M mismatches: 0 - insertions: 0 - deletions: 0
  • Cloning vector pFA-LIFEACT-GFP-URA3

    Cloning vector pFA-LIFEACT-GFP-URA3

    • Public DB hit
      GI:336287741
      JN051499
    • Hit length
      5,074 bp
    • E Value
      4.15E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      JN051499
      0.34% cov
    • Alignment Length
      17 bp
  • Cloning vector pFA-TagRFP-T-CdHIS1

    Cloning vector pFA-TagRFP-T-CdHIS1

    • Public DB hit
      GI:336287738
      JN051498
    • Hit length
      4,627 bp
    • E Value
      4.15E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      JN051498
      0.37% cov
    • Alignment Length
      17 bp
  • Cloning vector pFA-TagRFP-T-CmLEU2

    Cloning vector pFA-TagRFP-T-CmLEU2

    • Public DB hit
      GI:336287735
      JN051497
    • Hit length
      4,822 bp
    • E Value
      4.15E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      JN051497
      0.35% cov
    • Alignment Length
      17 bp
  • Cloning vector pFA-TagRFP-T-ARG4

    Cloning vector pFA-TagRFP-T-ARG4

    • Public DB hit
      GI:336287732
      JN051496
    • Hit length
      5,433 bp
    • E Value
      4.15E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      JN051496
      0.31% cov
    • Alignment Length
      17 bp
  • Cloning vector pFA-TagRFP-T-URA3

    Cloning vector pFA-TagRFP-T-URA3

    • Public DB hit
      GI:336287729
      JN051495
    • Hit length
      4,824 bp
    • E Value
      4.15E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      JN051495
      0.35% cov
    • Alignment Length
      17 bp
  • Cloning vector pBOB

    Cloning vector pBOB

    • Public DB hit
      GI:335355349
      JF927991
    • Hit length
      8,730 bp
    • E Value
      4.15E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      JF927991
      0.19% cov
    • Alignment Length
      17 bp
  • uncultured Mortierella

    uncultured Mortierella

    • Public DB hit
      GI:334904541
      JF831505
      1 of 2 hits reported for uncultured Mortierella.
    • Hit length
      767 bp
    • E Value
      4.15E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      JF831505
      2.22% cov
    • Alignment Length
      17 bp
  • uncultured Trichoderma

    uncultured Trichoderma

    • Public DB hit
      GI:334904520
      JF831474
    • Hit length
      816 bp
    • E Value
      4.15E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      JF831474
      2.08% cov
    • Alignment Length
      17 bp
  • Cloning vector pTrypRNAiGate

    Cloning vector pTrypRNAiGate

    • Public DB hit
      GI:334854400
      JF748716
    • Hit length
      9,177 bp
    • E Value
      4.15E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      JF748716
      0.19% cov
    • Alignment Length
      17 bp
  • Sebastes schlegelii

    Sebastes schlegelii

    • Public DB hit
      GI:335316739
      HQ712167
    • Hit length
      1,940 bp
    • E Value
      4.15E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      HQ712167
      0.88% cov
    • Alignment Length
      17 bp
  • Frankia symbiont of Datisca glomerata

    Frankia symbiont of Datisca glomerata

    • Public DB hit
      GI:334861322
      CP002802
    • Hit length
      12,355 bp
    • E Value
      4.15E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      CP002802
      0.14% cov
    • Alignment Length
      17 bp
  • Cloning vector pPLV34

    Cloning vector pPLV34

    • Public DB hit
      GI:334085873
      JF909487
    • Hit length
      5,606 bp
    • E Value
      4.15E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      JF909487
      0.3% cov
    • Alignment Length
      17 bp
  • Cloning vector pPLV33

    Cloning vector pPLV33

    • Public DB hit
      GI:334085870
      JF909486
    • Hit length
      5,251 bp
    • E Value
      4.15E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      JF909486
      0.32% cov
    • Alignment Length
      17 bp
  • Cloning vector pPLV32

    Cloning vector pPLV32

    • Public DB hit
      GI:334085867
      JF909485
    • Hit length
      4,898 bp
    • E Value
      4.15E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      JF909485
      0.35% cov
    • Alignment Length
      17 bp
  • Cloning vector pPLV31

    Cloning vector pPLV31

    • Public DB hit
      GI:334085864
      JF909484
    • Hit length
      9,507 bp
    • E Value
      4.15E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      JF909484
      0.18% cov
    • Alignment Length
      17 bp
  • Cloning vector pPLV30

    Cloning vector pPLV30

    • Public DB hit
      GI:334085861
      JF909483
    • Hit length
      9,152 bp
    • E Value
      4.15E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      JF909483
      0.19% cov
    • Alignment Length
      17 bp
  • Cloning vector pPLV29

    Cloning vector pPLV29

    • Public DB hit
      GI:334085858
      JF909482
    • Hit length
      8,799 bp
    • E Value
      4.15E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      JF909482
      0.19% cov
    • Alignment Length
      17 bp
  • Cloning vector pPLV28

    Cloning vector pPLV28

    • Public DB hit
      GI:334085855
      JF909481
    • Hit length
      6,389 bp
    • E Value
      4.15E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      JF909481
      0.27% cov
    • Alignment Length
      17 bp
  • Cloning vector pPLV27

    Cloning vector pPLV27

    • Public DB hit
      GI:334085852
      JF909480
    • Hit length
      6,750 bp
    • E Value
      4.15E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      JF909480
      0.25% cov
    • Alignment Length
      17 bp
  • Cloning vector pPLV26

    Cloning vector pPLV26

    • Public DB hit
      GI:334085849
      JF909479
    • Hit length
      6,395 bp
    • E Value
      4.15E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      JF909479
      0.27% cov
    • Alignment Length
      17 bp
  • Cloning vector pPLV25

    Cloning vector pPLV25

    • Public DB hit
      GI:334085846
      JF909478
    • Hit length
      6,042 bp
    • E Value
      4.15E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      JF909478
      0.28% cov
    • Alignment Length
      17 bp
Occurrence
405 times in PatSeqDB
Tools
SEQ ID NO
3
Length
30
Sequence Type
DNA
Locations
Detailed Description
Declared organism
Not specified
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:221136754
      NG_009378
      1 of 12 hits reported for Homo sapiens.
    • Hit length
      176,286 bp
    • E Value
      3.61E-7
    • BLAST Score
      60 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NG_009378
      0.02% cov
    • Alignment Length
      30 bp
    • CIGAR string
      30M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332818988
      XM_517080
      1 of 5 hits reported for Pan troglodytes.
    • Hit length
      13,621 bp
    • E Value
      3.61E-7
    • BLAST Score
      60 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XM_517080
      0.22% cov
    • Alignment Length
      30 bp
    • CIGAR string
      30M mismatches: 0 - insertions: 0 - deletions: 0
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:73951764
      XM_536221
    • Hit length
      9,393 bp
    • E Value
      3.61E-7
    • BLAST Score
      60 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XM_536221
      0.32% cov
    • Alignment Length
      30 bp
  • Colobus guereza

    Colobus guereza

    • Public DB hit
      GI:209980767
      EU797073
    • Hit length
      340 bp
    • E Value
      3.61E-7
    • BLAST Score
      60 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      EU797073
      8.82% cov
    • Alignment Length
      30 bp
  • Hylobates lar

    Hylobates lar

    • Public DB hit
      GI:209980755
      EU797067
    • Hit length
      331 bp
    • E Value
      3.61E-7
    • BLAST Score
      60 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      EU797067
      9.06% cov
    • Alignment Length
      30 bp
  • Pongo pygmaeus

    Pongo pygmaeus

    • Public DB hit
      GI:209980753
      EU797066
      1 of 3 hits reported for Pongo pygmaeus.
    • Hit length
      338 bp
    • E Value
      3.61E-7
    • BLAST Score
      60 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      EU797066
      8.88% cov
    • Alignment Length
      30 bp
  • Gorilla gorilla

    Gorilla gorilla

    • Public DB hit
      GI:209980747
      EU797063
      1 of 2 hits reported for Gorilla gorilla.
    • Hit length
      273 bp
    • E Value
      3.61E-7
    • BLAST Score
      60 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      EU797063
      10.99% cov
    • Alignment Length
      30 bp
Occurrence
16 times in PatSeqDB
Tools
SEQ ID NO
4
Length
30
Sequence Type
DNA
Locations
Detailed Description
Declared organism
Not specified
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:221136754
      NG_009378
      1 of 6 hits reported for Homo sapiens.
    • Hit length
      176,286 bp
    • E Value
      3.61E-7
    • BLAST Score
      60 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NG_009378
      0.02% cov
    • Alignment Length
      30 bp
    • CIGAR string
      30M mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
3 times in PatSeqDB
Tools
SEQ ID NO
5
Length
10,366
Sequence Type
DNA
Locations
Claims, Detailed Description, Drawings
Declared organism
Not specified
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:1709991
      L12392
      1 of 3 hits reported for Homo sapiens.
    • Hit length
      10,348 bp
    • E Value
      0E0
    • BLAST Score
      19,088.1 bits
    • Similarity
      99.96%
    • Coverage
      99.83%
    • Alignment (schematic)

      SEQ ID NO 5
      99.83% cov
      L12392
      100% cov
    • Alignment Length
      10,348 bp
    • CIGAR string
      1848MN522MN1661MN4642MN1671M18H mismatches: 4 - insertions: 0 - deletions: 0
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:225000683
      BC172756
    • Hit length
      9,496 bp
    • E Value
      0E0
    • BLAST Score
      17,396.6 bits
    • Similarity
      99.93%
    • Coverage
      91.09%
    • Alignment (schematic)

      SEQ ID NO 5
      91.09% cov
      BC172756
      99.42% cov
    • Alignment Length
      9,442 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297673011
      XM_002814525
    • Hit length
      13,169 bp
    • E Value
      0E0
    • BLAST Score
      16,739.2 bits
    • Similarity
      98.3%
    • Coverage
      92.18%
    • Alignment (schematic)

      SEQ ID NO 5
      92.18% cov
      XM_002814525
      72.53% cov
    • Alignment Length
      9,561 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:218783275
      AB443866
      1 of 2 hits reported for Callithrix jacchus.
    • Hit length
      9,396 bp
    • E Value
      0E0
    • BLAST Score
      14,894.3 bits
    • Similarity
      95.43%
    • Coverage
      90.18%
    • Alignment (schematic)

      SEQ ID NO 5
      90.18% cov
      AB443866
      99.46% cov
    • Alignment Length
      9,353 bp
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332818988
      XM_517080
    • Hit length
      13,621 bp
    • E Value
      0E0
    • BLAST Score
      12,922.1 bits
    • Similarity
      99.23%
    • Coverage
      69.11%
    • Alignment (schematic)

      SEQ ID NO 5
      69.11% cov
      XM_517080
      52.57% cov
    • Alignment Length
      7,165 bp
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:194209358
      XM_001488793
    • Hit length
      9,303 bp
    • E Value
      0E0
    • BLAST Score
      11,539 bits
    • Similarity
      89.44%
    • Coverage
      88.42%
    • Alignment (schematic)

      SEQ ID NO 5
      88.42% cov
      XM_001488793
      98.69% cov
    • Alignment Length
      9,234 bp
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:73951764
      XM_536221
    • Hit length
      9,393 bp
    • E Value
      0E0
    • BLAST Score
      10,528.9 bits
    • Similarity
      87.12%
    • Coverage
      90.03%
    • Alignment (schematic)

      SEQ ID NO 5
      90.03% cov
      XM_536221
      99.46% cov
    • Alignment Length
      9,412 bp
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301762369
      XM_002916563
    • Hit length
      9,270 bp
    • E Value
      0E0
    • BLAST Score
      10,362.7 bits
    • Similarity
      87.17%
    • Coverage
      88.42%
    • Alignment (schematic)

      SEQ ID NO 5
      88.42% cov
      XM_002916563
      99.01% cov
    • Alignment Length
      9,250 bp
  • Oryctolagus cuniculus

    Oryctolagus cuniculus

    • Public DB hit
      GI:291412371
      XM_002722410
    • Hit length
      9,372 bp
    • E Value
      0E0
    • BLAST Score
      10,013.7 bits
    • Similarity
      86.53%
    • Coverage
      88.42%
    • Alignment (schematic)

      SEQ ID NO 5
      88.42% cov
      XM_002722410
      97.48% cov
    • Alignment Length
      9,227 bp
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:55742657
      NM_213964
      1 of 2 hits reported for Sus scrofa.
    • Hit length
      12,709 bp
    • E Value
      0E0
    • BLAST Score
      9,177.1 bits
    • Similarity
      84.21%
    • Coverage
      92.11%
    • Alignment (schematic)

      SEQ ID NO 5
      92.11% cov
      NM_213964
      75.02% cov
    • Alignment Length
      9,653 bp
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332259986
      XM_003279017
    • Hit length
      10,341 bp
    • E Value
      0E0
    • BLAST Score
      9,057.1 bits
    • Similarity
      97.81%
    • Coverage
      50.66%
    • Alignment (schematic)

      SEQ ID NO 5
      50.66% cov
      XM_003279017
      50.75% cov
    • Alignment Length
      5,255 bp
Occurrence
3 times in PatSeqDB
Tools
SEQ ID NO
6
Length
3,144
Sequence Type
peptide
Locations
Claims, Detailed Description, Drawings
Declared organism
Not specified
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:90903231
      NP_002102
      1 of 4 hits reported for Homo sapiens.
    • Hit length
      3,144 aa
    • E Value
      0E0
    • BLAST Score
      6,449.4 bits
    • Similarity
      99.97%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NP_002102
      100% cov
    • Alignment Length
      3,144 aa
    • CIGAR string
      511MN173MN553MN1547MN356M mismatches: 4 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332818989
      XP_517080
    • Hit length
      3,128 aa
    • E Value
      0E0
    • BLAST Score
      6,015.6 bits
    • Similarity
      98.89%
    • Coverage
      97.52%
    • Alignment (schematic)

      SEQ ID NO 6
      97.52% cov
      XP_517080
      97.92% cov
    • Alignment Length
      3,067 aa
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297673012
      XP_002814571
    • Hit length
      2,983 aa
    • E Value
      0E0
    • BLAST Score
      5,897 bits
    • Similarity
      99.36%
    • Coverage
      94.91%
    • Alignment (schematic)

      SEQ ID NO 6
      94.91% cov
      XP_002814571
      100% cov
    • Alignment Length
      2,984 aa
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332259987
      XP_003279065
    • Hit length
      3,066 aa
    • E Value
      0E0
    • BLAST Score
      5,830.8 bits
    • Similarity
      96.61%
    • Coverage
      97.52%
    • Alignment (schematic)

      SEQ ID NO 6
      97.52% cov
      XP_003279065
      98.14% cov
    • Alignment Length
      3,067 aa
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296196994
      XP_002746086
    • Hit length
      3,094 aa
    • E Value
      0E0
    • BLAST Score
      5,795.7 bits
    • Similarity
      96.39%
    • Coverage
      97.52%
    • Alignment (schematic)

      SEQ ID NO 6
      97.52% cov
      XP_002746086
      97.87% cov
    • Alignment Length
      3,073 aa
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297281952
      XP_001086119
    • Hit length
      3,110 aa
    • E Value
      0E0
    • BLAST Score
      5,743.7 bits
    • Similarity
      94.81%
    • Coverage
      97.52%
    • Alignment (schematic)

      SEQ ID NO 6
      97.52% cov
      XP_001086119
      97.91% cov
    • Alignment Length
      3,103 aa
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:194209359
      XP_001488843
    • Hit length
      3,100 aa
    • E Value
      0E0
    • BLAST Score
      5,737.9 bits
    • Similarity
      95.82%
    • Coverage
      97.14%
    • Alignment (schematic)

      SEQ ID NO 6
      97.14% cov
      XP_001488843
      98.68% cov
    • Alignment Length
      3,061 aa
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301762370
      XP_002916609
      1 of 2 hits reported for Ailuropoda melanoleuca.
    • Hit length
      3,089 aa
    • E Value
      0E0
    • BLAST Score
      5,711.7 bits
    • Similarity
      95.07%
    • Coverage
      97.14%
    • Alignment (schematic)

      SEQ ID NO 6
      97.14% cov
      XP_002916609
      99% cov
    • Alignment Length
      3,061 aa
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:73951765
      XP_536221
    • Hit length
      3,130 aa
    • E Value
      0E0
    • BLAST Score
      5,695.9 bits
    • Similarity
      94.89%
    • Coverage
      97.52%
    • Alignment (schematic)

      SEQ ID NO 6
      97.52% cov
      XP_536221
      98.08% cov
    • Alignment Length
      3,073 aa
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:189339236
      NP_077333
    • Hit length
      3,120 aa
    • E Value
      0E0
    • BLAST Score
      5,668.6 bits
    • Similarity
      95.04%
    • Coverage
      97.39%
    • Alignment (schematic)

      SEQ ID NO 6
      97.39% cov
      NP_077333
      98.11% cov
    • Alignment Length
      3,064 aa
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:148705521
      EDL37468
    • Hit length
      3,142 aa
    • E Value
      0E0
    • BLAST Score
      5,661.6 bits
    • Similarity
      95.04%
    • Coverage
      97.39%
    • Alignment (schematic)

      SEQ ID NO 6
      97.39% cov
      EDL37468
      97.39% cov
    • Alignment Length
      3,063 aa
Occurrence
3 times in PatSeqDB
Tools
SEQ ID NO
7
Length
18
Sequence Type
DNA
Locations
Detailed Description
Declared organism
Not specified
Determined organism
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:315221149
      NM_010414
      1 of 10 hits reported for Mus musculus.
    • Hit length
      13,224 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NM_010414
      0.14% cov
    • Alignment Length
      18 bp
    • CIGAR string
      18M mismatches: 0 - insertions: 0 - deletions: 0
  • Desulfarculus baarsii DSM 2075

    Desulfarculus baarsii DSM 2075

    • Public DB hit
      GI:301638057
      CP002085
    • Hit length
      3,655,731 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      CP002085
      0% cov
    • Alignment Length
      18 bp
    • CIGAR string
      18M mismatches: 0 - insertions: 0 - deletions: 0
  • Desulfovibrio salexigens DSM 2638

    Desulfovibrio salexigens DSM 2638

    • Public DB hit
      GI:242120376
      CP001649
    • Hit length
      4,289,847 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      CP001649
      0% cov
    • Alignment Length
      18 bp
    • CIGAR string
      18M mismatches: 0 - insertions: 0 - deletions: 0
  • Cyanothece sp. PCC 7425

    Cyanothece sp. PCC 7425

    • Public DB hit
      GI:219862254
      CP001344
    • Hit length
      5,374,574 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      CP001344
      0% cov
    • Alignment Length
      18 bp
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:221136754
      NG_009378
    • Hit length
      176,286 bp
    • E Value
      4.14E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      94.44%
    • Alignment (schematic)

      SEQ ID NO 7
      94.44% cov
      NG_009378
      0.01% cov
    • Alignment Length
      17 bp
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332818988
      XM_517080
    • Hit length
      13,621 bp
    • E Value
      4.14E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      94.44%
    • Alignment (schematic)

      SEQ ID NO 7
      94.44% cov
      XM_517080
      0.12% cov
    • Alignment Length
      17 bp
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301762369
      XM_002916563
    • Hit length
      9,270 bp
    • E Value
      4.14E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      94.44%
    • Alignment (schematic)

      SEQ ID NO 7
      94.44% cov
      XM_002916563
      0.18% cov
    • Alignment Length
      17 bp
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:297476105
      XM_002688430
    • Hit length
      10,025 bp
    • E Value
      4.14E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      94.44%
    • Alignment (schematic)

      SEQ ID NO 7
      94.44% cov
      XM_002688430
      0.17% cov
    • Alignment Length
      17 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297281951
      XM_001086119
    • Hit length
      9,986 bp
    • E Value
      4.14E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      94.44%
    • Alignment (schematic)

      SEQ ID NO 7
      94.44% cov
      XM_001086119
      0.17% cov
    • Alignment Length
      17 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296196993
      XM_002746040
    • Hit length
      9,285 bp
    • E Value
      4.14E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      94.44%
    • Alignment (schematic)

      SEQ ID NO 7
      94.44% cov
      XM_002746040
      0.18% cov
    • Alignment Length
      17 bp
  • Caenorhabditis briggsae

    Caenorhabditis briggsae

    • Public DB hit
      GI:268579978
      XM_002644926
    • Hit length
      1,365 bp
    • E Value
      4.14E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      94.44%
    • Alignment (schematic)

      SEQ ID NO 7
      94.44% cov
      XM_002644926
      1.25% cov
    • Alignment Length
      17 bp
  • Ovis aries

    Ovis aries

    • Public DB hit
      GI:217416326
      NM_001142638
    • Hit length
      9,384 bp
    • E Value
      4.14E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      94.44%
    • Alignment (schematic)

      SEQ ID NO 7
      94.44% cov
      NM_001142638
      0.18% cov
    • Alignment Length
      17 bp
  • Culex quinquefasciatus

    Culex quinquefasciatus

    • Public DB hit
      GI:170032621
      XM_001844127
    • Hit length
      1,509 bp
    • E Value
      4.14E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      94.44%
    • Alignment (schematic)

      SEQ ID NO 7
      94.44% cov
      XM_001844127
      1.13% cov
    • Alignment Length
      17 bp
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:157818840
      NM_001107693
    • Hit length
      6,063 bp
    • E Value
      4.14E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      94.44%
    • Alignment (schematic)

      SEQ ID NO 7
      94.44% cov
      NM_001107693
      0.28% cov
    • Alignment Length
      17 bp
  • Nematostella vectensis

    Nematostella vectensis

    • Public DB hit
      GI:156399669
      XM_001638574
    • Hit length
      4,344 bp
    • E Value
      4.14E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      94.44%
    • Alignment (schematic)

      SEQ ID NO 7
      94.44% cov
      XM_001638574
      0.39% cov
    • Alignment Length
      17 bp
Occurrence
2 times in PatSeqDB
Tools
SEQ ID NO
8
Length
18
Sequence Type
DNA
Locations
Detailed Description
Declared organism
Not specified
Determined organism
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:315221149
      NM_010414
      1 of 10 hits reported for Mus musculus.
    • Hit length
      13,224 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NM_010414
      0.14% cov
    • Alignment Length
      18 bp
    • CIGAR string
      18M mismatches: 0 - insertions: 0 - deletions: 0
  • Listeria monocytogenes M7

    Listeria monocytogenes M7

    • Public DB hit
      GI:336021869
      CP002816
    • Hit length
      2,976,163 bp
    • E Value
      4.14E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      94.44%
    • Alignment (schematic)

      SEQ ID NO 8
      94.44% cov
      CP002816
      0% cov
    • Alignment Length
      17 bp
  • Listeria monocytogenes L99

    Listeria monocytogenes L99

    • Public DB hit
      GI:307569523
      FM211688
    • Hit length
      2,979,198 bp
    • E Value
      4.14E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      94.44%
    • Alignment (schematic)

      SEQ ID NO 8
      94.44% cov
      FM211688
      0% cov
    • Alignment Length
      17 bp
  • Staphylococcus aureus subsp. aureus ED133

    Staphylococcus aureus subsp. aureus ED133

    • Public DB hit
      GI:298693322
      CP001996
    • Hit length
      2,832,478 bp
    • E Value
      4.14E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      94.44%
    • Alignment (schematic)

      SEQ ID NO 8
      94.44% cov
      CP001996
      0% cov
    • Alignment Length
      17 bp
  • Escherichia fergusonii ATCC 35469

    Escherichia fergusonii ATCC 35469

    • Public DB hit
      GI:218354981
      CU928158
    • Hit length
      4,588,711 bp
    • E Value
      4.14E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      94.44%
    • Alignment (schematic)

      SEQ ID NO 8
      94.44% cov
      CU928158
      0% cov
    • Alignment Length
      17 bp
  • Listeria monocytogenes HCC23

    Listeria monocytogenes HCC23

    • Public DB hit
      GI:217332573
      CP001175
    • Hit length
      2,976,212 bp
    • E Value
      4.14E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      94.44%
    • Alignment (schematic)

      SEQ ID NO 8
      94.44% cov
      CP001175
      0% cov
    • Alignment Length
      17 bp
  • Listeria innocua Clip11262

    Listeria innocua Clip11262

    • Public DB hit
      GI:16414603
      AL596171
    • Hit length
      258,650 bp
    • E Value
      4.14E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      94.44%
    • Alignment (schematic)

      SEQ ID NO 8
      94.44% cov
      AL596171
      0.01% cov
    • Alignment Length
      17 bp
  • Staphylococcus aureus RF122

    Staphylococcus aureus RF122

    • Public DB hit
      GI:82655308
      AJ938182
    • Hit length
      2,742,531 bp
    • E Value
      4.14E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      94.44%
    • Alignment (schematic)

      SEQ ID NO 8
      94.44% cov
      AJ938182
      0% cov
    • Alignment Length
      17 bp
Occurrence
2 times in PatSeqDB
Tools
SEQ ID NO
9
Length
18
Sequence Type
DNA
Locations
Detailed Description
Declared organism
Not specified
Determined organism
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:315221149
      NM_010414
      1 of 7 hits reported for Mus musculus.
    • Hit length
      13,224 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      NM_010414
      0.14% cov
    • Alignment Length
      18 bp
    • CIGAR string
      18M mismatches: 0 - insertions: 0 - deletions: 0
  • Drosophila yakuba

    Drosophila yakuba

    • Public DB hit
      GI:195502296
      XM_002098125
      1 of 2 hits reported for Drosophila yakuba.
    • Hit length
      5,523 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XM_002098125
      0.33% cov
    • Alignment Length
      18 bp
    • CIGAR string
      18M mismatches: 0 - insertions: 0 - deletions: 0
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:189339235
      NM_024357
      1 of 5 hits reported for Rattus norvegicus.
    • Hit length
      10,295 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      NM_024357
      0.17% cov
    • Alignment Length
      18 bp
    • CIGAR string
      18M mismatches: 0 - insertions: 0 - deletions: 0
  • Podospora anserina S mat+

    Podospora anserina S mat+

    • Public DB hit
      GI:171686437
      XM_001908125
      1 of 3 hits reported for Podospora anserina S mat+.
    • Hit length
      927 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XM_001908125
      1.94% cov
    • Alignment Length
      18 bp
  • Leishmania braziliensis MHOM/BR/75/M2904

    Leishmania braziliensis MHOM/BR/75/M2904

    • Public DB hit
      GI:154331100
      XM_001561940
      1 of 3 hits reported for Leishmania braziliensis MHOM/BR/75/M2904.
    • Hit length
      5,139 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XM_001561940
      0.35% cov
    • Alignment Length
      18 bp
  • Magnaporthe oryzae 70-15

    Magnaporthe oryzae 70-15

    • Public DB hit
      GI:145614259
      XM_364018
      1 of 2 hits reported for Magnaporthe oryzae 70-15.
    • Hit length
      3,264 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XM_364018
      0.55% cov
    • Alignment Length
      18 bp
  • Ammonifex degensii KC4

    Ammonifex degensii KC4

    • Public DB hit
      GI:260864071
      CP001785
    • Hit length
      2,129,237 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      CP001785
      0% cov
    • Alignment Length
      18 bp
  • Actinosynnema mirum DSM 43827

    Actinosynnema mirum DSM 43827

    • Public DB hit
      GI:255918463
      CP001630
    • Hit length
      8,248,144 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      CP001630
      0% cov
    • Alignment Length
      18 bp
  • Sorangium cellulosum So ce56

    Sorangium cellulosum So ce56

    • Public DB hit
      GI:161158851
      AM746676
    • Hit length
      13,033,779 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      AM746676
      0% cov
    • Alignment Length
      18 bp
Occurrence
2 times in PatSeqDB
Tools
SEQ ID NO
10
Length
18
Sequence Type
DNA
Locations
Detailed Description
Declared organism
Not specified
Determined organism
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:315221149
      NM_010414
      1 of 10 hits reported for Mus musculus.
    • Hit length
      13,224 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      NM_010414
      0.14% cov
    • Alignment Length
      18 bp
    • CIGAR string
      18M mismatches: 0 - insertions: 0 - deletions: 0
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:115312603
      AC191785
    • Hit length
      191,415 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      AC191785
      0.01% cov
    • Alignment Length
      18 bp
    • CIGAR string
      18M mismatches: 0 - insertions: 0 - deletions: 0
  • Schizophyllum commune H4-8

    Schizophyllum commune H4-8

    • Public DB hit
      GI:302693047
      XM_003036157
      1 of 2 hits reported for Schizophyllum commune H4-8.
    • Hit length
      2,919 bp
    • E Value
      4.14E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      94.44%
    • Alignment (schematic)

      SEQ ID NO 10
      94.44% cov
      XM_003036157
      0.58% cov
    • Alignment Length
      17 bp
  • Desulfotomaculum kuznetsovii DSM 6115

    Desulfotomaculum kuznetsovii DSM 6115

    • Public DB hit
      GI:333820987
      CP002770
    • Hit length
      3,601,386 bp
    • E Value
      4.14E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      94.44%
    • Alignment (schematic)

      SEQ ID NO 10
      94.44% cov
      CP002770
      0% cov
    • Alignment Length
      17 bp
  • Oryza sativa Japonica Group

    Oryza sativa Japonica Group

    • Public DB hit
      GI:45860988
      AC120527
      1 of 2 hits reported for Oryza sativa Japonica Group.
    • Hit length
      154,441 bp
    • E Value
      4.14E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      94.44%
    • Alignment (schematic)

      SEQ ID NO 10
      94.44% cov
      AC120527
      0.01% cov
    • Alignment Length
      17 bp
Occurrence
2 times in PatSeqDB
Tools

Feedback