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Search for Biological Sequences disclosed in Patents

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Data obtained from: DDBJ Pat NCBI GenBank (EBI) EMBL-EBI Pat EPO Sequence Listings
6 sequences found in this patent (in total)

Displaying 6 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
1,972
Type
DNA
Locations
Fulltext

Declared organism:
Not specified

Determined organism:
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:4103489
      AF024519
      1 of 9 hits reported for Mus musculus.
    • Hit length
      1,972 bp
    • E Value
      0E0
    • BLAST Score
      3,642.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      AF024519
      100% cov
    • Alignment Length
      1,972 bp
    • CIGAR string
      1972M mismatches: 0 - insertions: 0 - deletions: 0
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:38303836
      BC061979
      1 of 2 hits reported for Rattus norvegicus.
    • Hit length
      2,016 bp
    • E Value
      0E0
    • BLAST Score
      2,841.3 bits
    • Similarity
      92.86%
    • Coverage
      99.9%
    • Alignment (schematic)

      SEQ ID NO 1
      99.9% cov
      BC061979
      97.12% cov
    • Alignment Length
      1,990 bp
    • CIGAR string
      2H3MN9MD23MN5MN5MI2MD14MDMI42MN3MN6MN7M2N2MN2MN10MN4MN2MD22MN17MI5MN24MN23MN16MN9MN53MN8MN38MN2MN8MN2M2N7MN48MN13MN11MN5MN20MN5MN5MN5MN23MN11MN20M4DM5D11MN47MN28MI16MN110MDMD8MN7MN13MN14MN7MN25MI15MN6MN25MD2MI5MNMN13MN15MD37MN30MN25MD10M2D4MNMD4MI26MN19MN37MN52MN20MI12M4I14MN6MN4MN28MN126M2I3MN10MI4MD12MN29MN6M2N27MD3MD83MD3MN7MN10MNI9M2I8MD2MD10MDMN4MN5MD4M2D13MD10MN3MN10MN15MN3MN6MN12MN2MI4M2N9MN16MN3MN40MN11MNMN17MN9MN31MN5MIMN5MN17M mismatches: 90 - insertions: 20 - deletions: 32
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332226076
      XM_003262167
    • Hit length
      2,024 bp
    • E Value
      0E0
    • BLAST Score
      1,820.1 bits
    • Similarity
      86.6%
    • Coverage
      84.38%
    • Alignment (schematic)

      SEQ ID NO 1
      84.38% cov
      XM_003262167
      83.05% cov
    • Alignment Length
      1,709 bp
    • CIGAR string
      5MN2MN18MN11MNMN10MN8MN4MDMDMN2MN6MN4M2IMN2M3IMN6M2I2MNMDMI2M2N5MNMIMD8MN4MN2MN2MD2MN4MNMN2MNM3IN2MIMIM3I4MI2MI3M3IM2I3M2I2MNMNMI3MI2MN4MN4MN3MN3MIN4MN46MN19MN9MN35MN5MN20MN9MN13MN2MN11MN2MN8MN2MN8MN21MN4MN11MN2MN6MNMN2MN14MN5MN11M2N7MN5MN5MN5MN5MN12MNMN5M2N13MN2MN3MN5MDN2M5DM2D2N3MD2MN37MN17M2IMN6MN37MN9MNMN17MN24MN9MN3MN30MD18MN2MN38MNM2N2MDMI2MNMN19MI13MNMN2MN3MNMN8MIN4MD6MN5M2N5MN13MN14MN4MN15MN17MN30MN8MN15MD3MN4MD3MIM2N9MI2MN21MNMN19MDMI36MN18MN5MN5MN21MN18MI31MN8MN4MN19MN28MN9MN9MN4MN6M2N7MN10MNMN9MN4MN16MN4MN10MNMIMIN3MNMN7M2DMN8M2N29M2N2M2I4MDNMN12MD2MN9MN25MN44MN7MNMNM2N3MN2M3I5M3D7MN5MD6M308H mismatches: 156 - insertions: 45 - deletions: 28
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:62865622
      NM_004089
      1 of 7 hits reported for Homo sapiens.
    • Hit length
      1,986 bp
    • E Value
      0E0
    • BLAST Score
      1,794.2 bits
    • Similarity
      89.15%
    • Coverage
      73.53%
    • Alignment (schematic)

      SEQ ID NO 1
      73.53% cov
      NM_004089
      72.81% cov
    • Alignment Length
      1,465 bp
    • CIGAR string
      174H3MI2MN4MN4MN2M2N3MIN4MN46MN19MN9MN35MN5MN20MN9MN13MN2MN11MN2MN8MN2MN8MN21MN4MN11MN2MN6MNMN17MN5MN11M2N7MN11MN5MN5MN12MNMN20MN2MN3MN5MDN2M5DM2D2N3MD2MN37MN17M2IMN6MN37M2N8MNMN17MN2MN21MN9MN3MN15MN14MD18MN2MN38MNM2N2MDMI2MNMN19MI13MNMN2MN3MNMN8MIN4MD6MN5M2N5MN13MN14MN4MN15MN17MN30MN8MN15MD8MD2MINM2N9MI2MN21MNMN19MDMI36MN18MN5MN27MN18MI31MN8MN4MN19MN28MN9MN9MN4MN6M2N7MN10MNMN9MN4MN10MN5MN4MN10MNMIMIN3MNMN7M2DMN8M2N11MN17M2N2M2I4MDNMN12MD2MN9MN25MN44MN7M348H mismatches: 125 - insertions: 15 - deletions: 19
Occurrence
6 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
137
Type
peptide
Locations
Claims, Fulltext

Declared organism:
Not specified

Determined organism:
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:4103490
      AAD01789
      1 of 3 hits reported for Mus musculus.
    • Hit length
      137 aa
    • E Value
      1.29E-72
    • BLAST Score
      276.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      AAD01789
      100% cov
    • Alignment Length
      137 aa
    • CIGAR string
      137M mismatches: 0 - insertions: 0 - deletions: 0
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:37622901
      NP_004080
      1 of 3 hits reported for Homo sapiens.
    • Hit length
      134 aa
    • E Value
      1.1E-65
    • BLAST Score
      253.4 bits
    • Similarity
      95.62%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NP_004080
      100% cov
    • Alignment Length
      137 aa
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332226077
      XP_003262215
    • Hit length
      134 aa
    • E Value
      5.02E-65
    • BLAST Score
      251.1 bits
    • Similarity
      94.89%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_003262215
      100% cov
    • Alignment Length
      137 aa
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:74008044
      XP_549177
    • Hit length
      134 aa
    • E Value
      5.55E-64
    • BLAST Score
      247.7 bits
    • Similarity
      93.43%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_549177
      100% cov
    • Alignment Length
      137 aa
  • Ornithorhynchus anatinus

    Ornithorhynchus anatinus

    • Public DB hit
      GI:149636759
      XP_001505336
    • Hit length
      139 aa
    • E Value
      5.94E-59
    • BLAST Score
      231.1 bits
    • Similarity
      89.21%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_001505336
      100% cov
    • Alignment Length
      139 aa
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:13786184
      NP_112635
    • Hit length
      134 aa
    • E Value
      2.39E-58
    • BLAST Score
      229.2 bits
    • Similarity
      94.16%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NP_112635
      100% cov
    • Alignment Length
      137 aa
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:311276758
      XP_003135346
    • Hit length
      134 aa
    • E Value
      1.58E-57
    • BLAST Score
      226.5 bits
    • Similarity
      94.16%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_003135346
      100% cov
    • Alignment Length
      137 aa
  • Gallus gallus

    Gallus gallus

    • Public DB hit
      GI:116175426
      NP_001070702
    • Hit length
      139 aa
    • E Value
      2.22E-55
    • BLAST Score
      219.2 bits
    • Similarity
      87.05%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NP_001070702
      100% cov
    • Alignment Length
      139 aa
  • Xenopus laevis

    Xenopus laevis

    • Public DB hit
      GI:148227099
      NP_001080286
    • Hit length
      137 aa
    • E Value
      1.25E-50
    • BLAST Score
      203.4 bits
    • Similarity
      92.5%
    • Coverage
      87.59%
    • Alignment (schematic)

      SEQ ID NO 2
      87.59% cov
      NP_001080286
      86.86% cov
    • Alignment Length
      120 aa
  • Salmo salar

    Salmo salar

    • Public DB hit
      GI:209155664
      ACI34064
    • Hit length
      150 aa
    • E Value
      2.21E-50
    • BLAST Score
      202.6 bits
    • Similarity
      92.44%
    • Coverage
      86.86%
    • Alignment (schematic)

      SEQ ID NO 2
      86.86% cov
      ACI34064
      79.33% cov
    • Alignment Length
      119 aa
  • Tetraodon nigroviridis

    Tetraodon nigroviridis

    • Public DB hit
      GI:47225229
      CAG09729
    • Hit length
      112 aa
    • E Value
      2.28E-50
    • BLAST Score
      202.6 bits
    • Similarity
      95.54%
    • Coverage
      81.02%
    • Alignment (schematic)

      SEQ ID NO 2
      81.02% cov
      CAG09729
      100% cov
    • Alignment Length
      112 aa
  • Xenopus (Silurana) tropicalis

    Xenopus (Silurana) tropicalis

    • Public DB hit
      GI:187607149
      NP_001120079
    • Hit length
      137 aa
    • E Value
      2.32E-50
    • BLAST Score
      202.6 bits
    • Similarity
      91.67%
    • Coverage
      87.59%
    • Alignment (schematic)

      SEQ ID NO 2
      87.59% cov
      NP_001120079
      86.86% cov
    • Alignment Length
      120 aa
Occurrence
15 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
3
Length
20
Type
DNA
Locations
Fulltext

Declared organism:
Not specified

Determined organism:
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:116517341
      NM_010286
      1 of 15 hits reported for Mus musculus.
    • Hit length
      1,972 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NM_010286
      1.01% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:13786183
      NM_031345
      1 of 3 hits reported for Rattus norvegicus.
    • Hit length
      1,969 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NM_031345
      1.02% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
8 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
4
Length
20
Type
DNA
Locations
Fulltext

Declared organism:
Not specified

Determined organism:
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:297459059
      XM_002684451
      1 of 3 hits reported for Bos taurus.
    • Hit length
      765 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XM_002684451
      2.61% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Mammalian expression vector pCK25

    Mammalian expression vector pCK25

    • Public DB hit
      GI:317185362
      HQ644134
    • Hit length
      6,726 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      HQ644134
      0.3% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Shuttle DNA vaccine vector pLKV1

    Shuttle DNA vaccine vector pLKV1

    • Public DB hit
      GI:316990495
      HM569775
    • Hit length
      4,448 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      HM569775
      0.45% cov
    • Alignment Length
      20 bp
  • Cloning vector pInSRT-GFPV1

    Cloning vector pInSRT-GFPV1

    • Public DB hit
      GI:316980675
      AB570081
    • Hit length
      12,929 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      AB570081
      0.15% cov
    • Alignment Length
      20 bp
  • Cloning vector pInSRT-GFPV3

    Cloning vector pInSRT-GFPV3

    • Public DB hit
      GI:316980672
      AB570080
    • Hit length
      7,667 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      AB570080
      0.26% cov
    • Alignment Length
      20 bp
  • Cloning vector pori6K-pA

    Cloning vector pori6K-pA

    • Public DB hit
      GI:310753039
      HQ232343
    • Hit length
      1,508 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      HQ232343
      1.33% cov
    • Alignment Length
      20 bp
  • Cloning vector pEFFS-sigHA

    Cloning vector pEFFS-sigHA

    • Public DB hit
      GI:309753680
      HQ333206
    • Hit length
      4,046 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      HQ333206
      0.49% cov
    • Alignment Length
      20 bp
  • Knock-in vector FBDki

    Knock-in vector FBDki

    • Public DB hit
      GI:308743325
      HM357235
    • Hit length
      10,504 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      HM357235
      0.19% cov
    • Alignment Length
      20 bp
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:300872545
      HM365221
    • Hit length
      4,964 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      HM365221
      0.4% cov
    • Alignment Length
      20 bp
  • PiggyBac insertional mutagenesis vector Slingshot-PB

    PiggyBac insertional mutagenesis vector Slingshot-PB

    • Public DB hit
      GI:294985311
      GU937109
    • Hit length
      15,199 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      GU937109
      0.13% cov
    • Alignment Length
      20 bp
  • Cloning vector pEF-F3-EGFP-F3-mcs

    Cloning vector pEF-F3-EGFP-F3-mcs

    • Public DB hit
      GI:291361502
      GU983383
    • Hit length
      4,766 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      GU983383
      0.42% cov
    • Alignment Length
      20 bp
  • Soriano targeting vector

    Soriano targeting vector

    • Public DB hit
      GI:260918163
      GQ424832
    • Hit length
      10,506 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      GQ424832
      0.19% cov
    • Alignment Length
      20 bp
  • Expression vector pcDNA/HA-FLAG

    Expression vector pcDNA/HA-FLAG

    • Public DB hit
      GI:255316782
      FJ524378
    • Hit length
      5,560 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      FJ524378
      0.36% cov
    • Alignment Length
      20 bp
  • Cloning vector pCMV-HIF-1a-FLAG

    Cloning vector pCMV-HIF-1a-FLAG

    • Public DB hit
      GI:254973564
      GQ340758
    • Hit length
      7,858 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      GQ340758
      0.25% cov
    • Alignment Length
      20 bp
  • Cloning vector pRama-35

    Cloning vector pRama-35

    • Public DB hit
      GI:254575550
      GQ258350
    • Hit length
      5,312 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      GQ258350
      0.38% cov
    • Alignment Length
      20 bp
  • Cloning vector pRama-34

    Cloning vector pRama-34

    • Public DB hit
      GI:254575546
      GQ258349
    • Hit length
      8,361 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      GQ258349
      0.24% cov
    • Alignment Length
      20 bp
  • Cloning vector pRama-31

    Cloning vector pRama-31

    • Public DB hit
      GI:254575543
      GQ258348
    • Hit length
      4,828 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      GQ258348
      0.41% cov
    • Alignment Length
      20 bp
  • Retroviral expression vector L149

    Retroviral expression vector L149

    • Public DB hit
      GI:207091329
      EU753858
    • Hit length
      9,502 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      EU753858
      0.21% cov
    • Alignment Length
      20 bp
  • PiggyBac transposon gene trap vector PBGTV1-2

    PiggyBac transposon gene trap vector PBGTV1-2

    • Public DB hit
      GI:226433907
      FJ495179
    • Hit length
      9,022 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      FJ495179
      0.22% cov
    • Alignment Length
      20 bp
  • PiggyBac transposon gene trap vector PBGTV1-1

    PiggyBac transposon gene trap vector PBGTV1-1

    • Public DB hit
      GI:226433906
      FJ495178
    • Hit length
      9,021 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      FJ495178
      0.22% cov
    • Alignment Length
      20 bp
  • PiggyBac transposon gene trap vector PBGTV1-0

    PiggyBac transposon gene trap vector PBGTV1-0

    • Public DB hit
      GI:226433905
      FJ495177
    • Hit length
      9,020 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      FJ495177
      0.22% cov
    • Alignment Length
      20 bp
  • Lentiviral transfer vector pFTM3GW

    Lentiviral transfer vector pFTM3GW

    • Public DB hit
      GI:225542625
      FJ797421
    • Hit length
      8,956 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      FJ797421
      0.22% cov
    • Alignment Length
      20 bp
  • Cloning vector L087 RRI-Red

    Cloning vector L087 RRI-Red

    • Public DB hit
      GI:172053657
      EU424173
    • Hit length
      8,215 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      EU424173
      0.24% cov
    • Alignment Length
      20 bp
Occurrence
8 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
5
Length
1,946
Type
DNA
Locations
Fulltext

Declared organism:
Not specified

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:10086252
      AF228339
      1 of 17 hits reported for Homo sapiens.
    • Hit length
      1,946 bp
    • E Value
      0E0
    • BLAST Score
      3,594.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      AF228339
      100% cov
    • Alignment Length
      1,946 bp
    • CIGAR string
      1946M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332861380
      XM_003317611
    • Hit length
      2,027 bp
    • E Value
      0E0
    • BLAST Score
      3,491.3 bits
    • Similarity
      99.23%
    • Coverage
      99.49%
    • Alignment (schematic)

      SEQ ID NO 5
      99.49% cov
      XM_003317611
      95.46% cov
    • Alignment Length
      1,939 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:197099793
      NM_001131401
    • Hit length
      1,973 bp
    • E Value
      0E0
    • BLAST Score
      3,369.4 bits
    • Similarity
      98.05%
    • Coverage
      99.59%
    • Alignment (schematic)

      SEQ ID NO 5
      99.59% cov
      NM_001131401
      98.28% cov
    • Alignment Length
      1,949 bp
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332226076
      XM_003262167
    • Hit length
      2,024 bp
    • E Value
      0E0
    • BLAST Score
      3,339.9 bits
    • Similarity
      97.84%
    • Coverage
      99.49%
    • Alignment (schematic)

      SEQ ID NO 5
      99.49% cov
      XM_003262167
      95.45% cov
    • Alignment Length
      1,943 bp
Occurrence
46 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
6
Length
134
Type
peptide
Locations
Fulltext

Declared organism:
Not specified

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:37622901
      NP_004080
      1 of 3 hits reported for Homo sapiens.
    • Hit length
      134 aa
    • E Value
      2.41E-71
    • BLAST Score
      272.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NP_004080
      100% cov
    • Alignment Length
      134 aa
    • CIGAR string
      134M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332226077
      XP_003262215
    • Hit length
      134 aa
    • E Value
      1.5E-70
    • BLAST Score
      269.6 bits
    • Similarity
      99.25%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XP_003262215
      100% cov
    • Alignment Length
      134 aa
    • CIGAR string
      114MN19M mismatches: 1 - insertions: 0 - deletions: 0
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:74008044
      XP_549177
    • Hit length
      134 aa
    • E Value
      1.41E-66
    • BLAST Score
      256.5 bits
    • Similarity
      96.27%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XP_549177
      100% cov
    • Alignment Length
      134 aa
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:311276758
      XP_003135346
    • Hit length
      134 aa
    • E Value
      3.33E-59
    • BLAST Score
      231.9 bits
    • Similarity
      98.51%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XP_003135346
      100% cov
    • Alignment Length
      134 aa
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:13786184
      NP_112635
    • Hit length
      134 aa
    • E Value
      4.27E-59
    • BLAST Score
      231.5 bits
    • Similarity
      98.51%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NP_112635
      100% cov
    • Alignment Length
      134 aa
  • Ornithorhynchus anatinus

    Ornithorhynchus anatinus

    • Public DB hit
      GI:149636759
      XP_001505336
    • Hit length
      139 aa
    • E Value
      1.65E-58
    • BLAST Score
      229.6 bits
    • Similarity
      88.49%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XP_001505336
      100% cov
    • Alignment Length
      139 aa
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:116517342
      NP_034416
      1 of 3 hits reported for Mus musculus.
    • Hit length
      137 aa
    • E Value
      3.44E-57
    • BLAST Score
      225.3 bits
    • Similarity
      99.12%
    • Coverage
      85.07%
    • Alignment (schematic)

      SEQ ID NO 6
      85.07% cov
      NP_034416
      83.21% cov
    • Alignment Length
      114 aa
  • Gallus gallus

    Gallus gallus

    • Public DB hit
      GI:116175426
      NP_001070702
    • Hit length
      139 aa
    • E Value
      6.17E-55
    • BLAST Score
      217.6 bits
    • Similarity
      87.77%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NP_001070702
      100% cov
    • Alignment Length
      139 aa
  • Tetraodon nigroviridis

    Tetraodon nigroviridis

    • Public DB hit
      GI:47225229
      CAG09729
    • Hit length
      112 aa
    • E Value
      1.97E-51
    • BLAST Score
      206.1 bits
    • Similarity
      96.43%
    • Coverage
      82.84%
    • Alignment (schematic)

      SEQ ID NO 6
      82.84% cov
      CAG09729
      100% cov
    • Alignment Length
      112 aa
  • Salmo salar

    Salmo salar

    • Public DB hit
      GI:209155664
      ACI34064
    • Hit length
      150 aa
    • E Value
      1.77E-50
    • BLAST Score
      203 bits
    • Similarity
      97.27%
    • Coverage
      82.09%
    • Alignment (schematic)

      SEQ ID NO 6
      82.09% cov
      ACI34064
      73.33% cov
    • Alignment Length
      110 aa
  • Xenopus laevis

    Xenopus laevis

    • Public DB hit
      GI:148227099
      NP_001080286
    • Hit length
      137 aa
    • E Value
      2.39E-50
    • BLAST Score
      202.6 bits
    • Similarity
      92.5%
    • Coverage
      89.55%
    • Alignment (schematic)

      SEQ ID NO 6
      89.55% cov
      NP_001080286
      86.86% cov
    • Alignment Length
      120 aa
  • Xenopus (Silurana) tropicalis

    Xenopus (Silurana) tropicalis

    • Public DB hit
      GI:187607149
      NP_001120079
    • Hit length
      137 aa
    • E Value
      4.47E-50
    • BLAST Score
      201.4 bits
    • Similarity
      91.67%
    • Coverage
      89.55%
    • Alignment (schematic)

      SEQ ID NO 6
      89.55% cov
      NP_001120079
      86.86% cov
    • Alignment Length
      120 aa
Occurrence
138 times in PatSeqDB
Tools
PatSeq Finder

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