Methods Of Diagnosing And Prognosing Lung Cancer

  • Published: May 19, 2011
  • Earliest Priority: Feb 05 2007
  • Family: 4
  • Cited Works: 29
  • Cited by: 12
  • Cites: 0
  • Sequences: 2
  • Additional Info: Cited Works Full text
Data obtained from: USPTO Fulltext
2 sequences found in this patent (in total)

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Download sequences in fasta format: 1 peptide 1 nucleotide

Displaying 2 sequences

SEQ ID NO
Length
Sequence Type
Locations
Declared organism
Determined organism
Occurrence
Tools
SEQ ID NO
1
Length
3,286
Sequence Type
nucleotide
Locations
Detailed Description
Declared organism
Homo sapiens
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:58530881
      NM_000455
      1 of 5 hits reported for Homo sapiens.
    • Hit length
      3,286 bp
    • E Value
      0E0
    • BLAST Score
      6,069.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      NM_000455
      100% cov
    • Alignment Length
      3,286 bp
    • CIGAR string
      3286M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332850888
      XM_524028
    • Hit length
      3,623 bp
    • E Value
      0E0
    • BLAST Score
      5,795.9 bits
    • Similarity
      98.63%
    • Coverage
      99.7%
    • Alignment (schematic)

      SEQ ID NO 1
      99.7% cov
      XM_524028
      90.28% cov
    • Alignment Length
      3,280 bp
    • CIGAR string
      64MN178MN9MN6MN282MN88MD61MN19MN44MN116MN122M4D6MD88MN315MN146MN56MN32MN14MN167MN158MN163MN4MN88MN223M3I15MN67MN17MN32M2D11MN31MN15MN166MN58MI3MD105MN18MN7MN100MN131MN10M10H mismatches: 32 - insertions: 4 - deletions: 9
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332255830
      XM_003276983
    • Hit length
      2,370 bp
    • E Value
      0E0
    • BLAST Score
      3,757.2 bits
    • Similarity
      96.69%
    • Coverage
      68.96%
    • Alignment (schematic)

      SEQ ID NO 1
      68.96% cov
      XM_003276983
      95.06% cov
    • Alignment Length
      2,268 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297275639
      XM_001093806
    • Hit length
      2,335 bp
    • E Value
      0E0
    • BLAST Score
      3,731.4 bits
    • Similarity
      95.45%
    • Coverage
      71.52%
    • Alignment (schematic)

      SEQ ID NO 1
      71.52% cov
      XM_001093806
      99.87% cov
    • Alignment Length
      2,353 bp
Occurrence
66 times in PatSeqDB
Tools
SEQ ID NO
2
Length
433
Sequence Type
peptide
Locations
Detailed Description
Declared organism
Homo sapiens
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:4507271
      NP_000446
      1 of 4 hits reported for Homo sapiens.
    • Hit length
      433 aa
    • E Value
      0E0
    • BLAST Score
      902.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NP_000446
      100% cov
    • Alignment Length
      433 aa
    • CIGAR string
      433M mismatches: 0 - insertions: 0 - deletions: 0
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:30585365
      AAP36955
    • Hit length
      434 aa
    • E Value
      0E0
    • BLAST Score
      902.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      AAP36955
      99.77% cov
    • Alignment Length
      433 aa
    • CIGAR string
      433M mismatches: 0 - insertions: 0 - deletions: 0
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:109122721
      XP_001093806
    • Hit length
      433 aa
    • E Value
      0E0
    • BLAST Score
      896.7 bits
    • Similarity
      99.54%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_001093806
      100% cov
    • Alignment Length
      433 aa
    • CIGAR string
      378MN3MN21MN28M mismatches: 3 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:114674399
      XP_524028
    • Hit length
      433 aa
    • E Value
      0E0
    • BLAST Score
      895.2 bits
    • Similarity
      99.31%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_524028
      100% cov
    • Alignment Length
      433 aa
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332255831
      XP_003277031
    • Hit length
      433 aa
    • E Value
      0E0
    • BLAST Score
      893.6 bits
    • Similarity
      99.31%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_003277031
      100% cov
    • Alignment Length
      433 aa
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296228632
      XP_002807726
    • Hit length
      643 aa
    • E Value
      0E0
    • BLAST Score
      868.6 bits
    • Similarity
      97.69%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_002807726
      67.19% cov
    • Alignment Length
      433 aa
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:149760327
      XP_001492206
    • Hit length
      438 aa
    • E Value
      0E0
    • BLAST Score
      821.6 bits
    • Similarity
      94.98%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_001492206
      100% cov
    • Alignment Length
      438 aa
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:73987574
      XP_542206
    • Hit length
      439 aa
    • E Value
      0E0
    • BLAST Score
      813.1 bits
    • Similarity
      94.08%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_542206
      100% cov
    • Alignment Length
      439 aa
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301776316
      XP_002923557
    • Hit length
      439 aa
    • E Value
      0E0
    • BLAST Score
      810.8 bits
    • Similarity
      93.85%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_002923557
      100% cov
    • Alignment Length
      439 aa
  • Mesocricetus auratus

    Mesocricetus auratus

    • Public DB hit
      GI:225380230
      BAH29933
    • Hit length
      436 aa
    • E Value
      0E0
    • BLAST Score
      784.3 bits
    • Similarity
      93.38%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      BAH29933
      100% cov
    • Alignment Length
      438 aa
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:7106425
      NP_035622
    • Hit length
      436 aa
    • E Value
      0E0
    • BLAST Score
      767.7 bits
    • Similarity
      92.69%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NP_035622
      100% cov
    • Alignment Length
      438 aa
  • Meleagris gallopavo

    Meleagris gallopavo

    • Public DB hit
      GI:326934428
      XP_003213292
    • Hit length
      440 aa
    • E Value
      0E0
    • BLAST Score
      756.5 bits
    • Similarity
      93.18%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_003213292
      100% cov
    • Alignment Length
      440 aa
Occurrence
132 times in PatSeqDB
Tools

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