Patents
WO 2010/116196 A2

Diagnosisof And Treatment Gluten-induced Autoimmune Diseases

  • Published: Oct 14, 2010
  • Earliest Priority: Apr 01 2009
  • Family: 8
  • Cited Works: 83
  • Cited by: 4
  • Cites: 0
  • Sequences: 20
  • Additional Info: Cited Works Full text
Patent Application
WO 2010/116196 A2
082-726-384-019-47X
Data obtained from: NCBI GenBank (EBI) DDBJ Pat EPO Sequence Listings EMBL-EBI Pat
20 sequences found in this patent (in total)

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Download sequences in fasta format: 4 peptides 16 DNAs

Displaying 1 - 10 of 20 sequences

SEQ ID NO
Length
Sequence Type
Locations
Declared organism
Determined organism
Occurrence
Tools
SEQ ID NO
1
Length
43
Sequence Type
DNA
Locations
Undetermined
Declared organism
Artificial
Determined organism
Occurrence
6 times in PatSeqDB
Tools
SEQ ID NO
2
Length
45
Sequence Type
DNA
Locations
Undetermined
Declared organism
Artificial
Determined organism
Occurrence
6 times in PatSeqDB
Tools
SEQ ID NO
3
Length
35
Sequence Type
DNA
Locations
Undetermined
Declared organism
Artificial
Determined organism
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332209029
      XM_003253565
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      3,931 bp
    • E Value
      3.34E-5
    • BLAST Score
      54 bits
    • Similarity
      94.29%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XM_003253565
      0.89% cov
    • Alignment Length
      35 bp
    • CIGAR string
      16MNMN16M mismatches: 2 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297707058
      XM_002830290
      1 of 4 hits reported for Pongo abelii.
    • Hit length
      3,667 bp
    • E Value
      3.34E-5
    • BLAST Score
      54 bits
    • Similarity
      94.29%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XM_002830290
      0.95% cov
    • Alignment Length
      35 bp
    • CIGAR string
      16MNMN16M mismatches: 2 - insertions: 0 - deletions: 0
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297259842
      XM_001095155
      1 of 2 hits reported for Macaca mulatta.
    • Hit length
      1,959 bp
    • E Value
      3.34E-5
    • BLAST Score
      54 bits
    • Similarity
      94.29%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XM_001095155
      1.79% cov
    • Alignment Length
      35 bp
  • Oryctolagus cuniculus

    Oryctolagus cuniculus

    • Public DB hit
      GI:291388604
      XM_002710813
      1 of 2 hits reported for Oryctolagus cuniculus.
    • Hit length
      2,708 bp
    • E Value
      3.34E-5
    • BLAST Score
      54 bits
    • Similarity
      94.29%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XM_002710813
      1.29% cov
    • Alignment Length
      35 bp
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:39777596
      NM_004613
      1 of 12 hits reported for Homo sapiens.
    • Hit length
      3,937 bp
    • E Value
      3.34E-5
    • BLAST Score
      54 bits
    • Similarity
      94.29%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NM_004613
      0.89% cov
    • Alignment Length
      35 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:325464540
      JF432824
      1 of 3 hits reported for synthetic construct.
    • Hit length
      1,746 bp
    • E Value
      3.34E-5
    • BLAST Score
      54 bits
    • Similarity
      94.29%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      JF432824
      2% cov
    • Alignment Length
      35 bp
Occurrence
6 times in PatSeqDB
Tools
SEQ ID NO
4
Length
35
Sequence Type
DNA
Locations
Undetermined
Declared organism
Artificial
Determined organism
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332209029
      XM_003253565
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      3,931 bp
    • E Value
      3.34E-5
    • BLAST Score
      54 bits
    • Similarity
      94.29%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XM_003253565
      0.89% cov
    • Alignment Length
      35 bp
    • CIGAR string
      16MNMN16M mismatches: 2 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297707058
      XM_002830290
      1 of 4 hits reported for Pongo abelii.
    • Hit length
      3,667 bp
    • E Value
      3.34E-5
    • BLAST Score
      54 bits
    • Similarity
      94.29%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XM_002830290
      0.95% cov
    • Alignment Length
      35 bp
    • CIGAR string
      16MNMN16M mismatches: 2 - insertions: 0 - deletions: 0
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297259842
      XM_001095155
      1 of 2 hits reported for Macaca mulatta.
    • Hit length
      1,959 bp
    • E Value
      3.34E-5
    • BLAST Score
      54 bits
    • Similarity
      94.29%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XM_001095155
      1.79% cov
    • Alignment Length
      35 bp
  • Oryctolagus cuniculus

    Oryctolagus cuniculus

    • Public DB hit
      GI:291388604
      XM_002710813
      1 of 2 hits reported for Oryctolagus cuniculus.
    • Hit length
      2,708 bp
    • E Value
      3.34E-5
    • BLAST Score
      54 bits
    • Similarity
      94.29%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XM_002710813
      1.29% cov
    • Alignment Length
      35 bp
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:39777596
      NM_004613
      1 of 12 hits reported for Homo sapiens.
    • Hit length
      3,937 bp
    • E Value
      3.34E-5
    • BLAST Score
      54 bits
    • Similarity
      94.29%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NM_004613
      0.89% cov
    • Alignment Length
      35 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:325464540
      JF432824
      1 of 3 hits reported for synthetic construct.
    • Hit length
      1,746 bp
    • E Value
      3.34E-5
    • BLAST Score
      54 bits
    • Similarity
      94.29%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      JF432824
      2% cov
    • Alignment Length
      35 bp
Occurrence
6 times in PatSeqDB
Tools
SEQ ID NO
5
Length
34
Sequence Type
DNA
Locations
Undetermined
Declared organism
Artificial
Determined organism
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332858422
      XM_525321
      1 of 4 hits reported for Pan troglodytes.
    • Hit length
      3,712 bp
    • E Value
      3.01E-2
    • BLAST Score
      44.1 bits
    • Similarity
      91.18%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XM_525321
      0.92% cov
    • Alignment Length
      34 bp
    • CIGAR string
      18M3N13M mismatches: 3 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332209029
      XM_003253565
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      3,931 bp
    • E Value
      3.01E-2
    • BLAST Score
      44.1 bits
    • Similarity
      91.18%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XM_003253565
      0.86% cov
    • Alignment Length
      34 bp
    • CIGAR string
      18M3N13M mismatches: 3 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297707060
      XM_002830291
      1 of 6 hits reported for Pongo abelii.
    • Hit length
      3,702 bp
    • E Value
      3.01E-2
    • BLAST Score
      44.1 bits
    • Similarity
      91.18%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XM_002830291
      0.92% cov
    • Alignment Length
      34 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296200429
      XM_002747551
      1 of 2 hits reported for Callithrix jacchus.
    • Hit length
      2,129 bp
    • E Value
      3.01E-2
    • BLAST Score
      44.1 bits
    • Similarity
      91.18%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XM_002747551
      1.6% cov
    • Alignment Length
      34 bp
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:39777596
      NM_004613
      1 of 9 hits reported for Homo sapiens.
    • Hit length
      3,937 bp
    • E Value
      3.01E-2
    • BLAST Score
      44.1 bits
    • Similarity
      91.18%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NM_004613
      0.86% cov
    • Alignment Length
      34 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:325464540
      JF432824
      1 of 2 hits reported for synthetic construct.
    • Hit length
      1,746 bp
    • E Value
      3.01E-2
    • BLAST Score
      44.1 bits
    • Similarity
      91.18%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      JF432824
      1.95% cov
    • Alignment Length
      34 bp
Occurrence
6 times in PatSeqDB
Tools
SEQ ID NO
6
Length
34
Sequence Type
DNA
Locations
Undetermined
Declared organism
Artificial
Determined organism
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332858422
      XM_525321
      1 of 4 hits reported for Pan troglodytes.
    • Hit length
      3,712 bp
    • E Value
      3.01E-2
    • BLAST Score
      44.1 bits
    • Similarity
      91.18%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_525321
      0.92% cov
    • Alignment Length
      34 bp
    • CIGAR string
      13M3N18M mismatches: 3 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332209029
      XM_003253565
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      3,931 bp
    • E Value
      3.01E-2
    • BLAST Score
      44.1 bits
    • Similarity
      91.18%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_003253565
      0.86% cov
    • Alignment Length
      34 bp
    • CIGAR string
      13M3N18M mismatches: 3 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297707060
      XM_002830291
      1 of 6 hits reported for Pongo abelii.
    • Hit length
      3,702 bp
    • E Value
      3.01E-2
    • BLAST Score
      44.1 bits
    • Similarity
      91.18%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_002830291
      0.92% cov
    • Alignment Length
      34 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296200429
      XM_002747551
      1 of 2 hits reported for Callithrix jacchus.
    • Hit length
      2,129 bp
    • E Value
      3.01E-2
    • BLAST Score
      44.1 bits
    • Similarity
      91.18%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_002747551
      1.6% cov
    • Alignment Length
      34 bp
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:39777596
      NM_004613
      1 of 9 hits reported for Homo sapiens.
    • Hit length
      3,937 bp
    • E Value
      3.01E-2
    • BLAST Score
      44.1 bits
    • Similarity
      91.18%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NM_004613
      0.86% cov
    • Alignment Length
      34 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:325464540
      JF432824
      1 of 2 hits reported for synthetic construct.
    • Hit length
      1,746 bp
    • E Value
      3.01E-2
    • BLAST Score
      44.1 bits
    • Similarity
      91.18%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      JF432824
      1.95% cov
    • Alignment Length
      34 bp
Occurrence
6 times in PatSeqDB
Tools
SEQ ID NO
7
Length
35
Sequence Type
DNA
Locations
Undetermined
Declared organism
Artificial
Determined organism
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332858422
      XM_525321
      1 of 5 hits reported for Pan troglodytes.
    • Hit length
      3,712 bp
    • E Value
      3.34E-5
    • BLAST Score
      54 bits
    • Similarity
      94.29%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XM_525321
      0.94% cov
    • Alignment Length
      35 bp
    • CIGAR string
      17M2N16M mismatches: 2 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332209029
      XM_003253565
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      3,931 bp
    • E Value
      3.34E-5
    • BLAST Score
      54 bits
    • Similarity
      94.29%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XM_003253565
      0.89% cov
    • Alignment Length
      35 bp
    • CIGAR string
      17M2N16M mismatches: 2 - insertions: 0 - deletions: 0
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:39777596
      NM_004613
      1 of 11 hits reported for Homo sapiens.
    • Hit length
      3,937 bp
    • E Value
      3.34E-5
    • BLAST Score
      54 bits
    • Similarity
      94.29%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NM_004613
      0.89% cov
    • Alignment Length
      35 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:261858111
      AB527414
    • Hit length
      2,078 bp
    • E Value
      3.34E-5
    • BLAST Score
      54 bits
    • Similarity
      94.29%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      AB527414
      1.68% cov
    • Alignment Length
      35 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297707060
      XM_002830291
      1 of 6 hits reported for Pongo abelii.
    • Hit length
      3,702 bp
    • E Value
      8.15E-3
    • BLAST Score
      46.1 bits
    • Similarity
      91.43%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XM_002830291
      0.95% cov
    • Alignment Length
      35 bp
Occurrence
6 times in PatSeqDB
Tools
SEQ ID NO
8
Length
35
Sequence Type
DNA
Locations
Undetermined
Declared organism
Artificial
Determined organism
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332858422
      XM_525321
      1 of 5 hits reported for Pan troglodytes.
    • Hit length
      3,712 bp
    • E Value
      3.34E-5
    • BLAST Score
      54 bits
    • Similarity
      94.29%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XM_525321
      0.94% cov
    • Alignment Length
      35 bp
    • CIGAR string
      16M2N17M mismatches: 2 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332209029
      XM_003253565
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      3,931 bp
    • E Value
      3.34E-5
    • BLAST Score
      54 bits
    • Similarity
      94.29%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XM_003253565
      0.89% cov
    • Alignment Length
      35 bp
    • CIGAR string
      16M2N17M mismatches: 2 - insertions: 0 - deletions: 0
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:39777596
      NM_004613
      1 of 11 hits reported for Homo sapiens.
    • Hit length
      3,937 bp
    • E Value
      3.34E-5
    • BLAST Score
      54 bits
    • Similarity
      94.29%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NM_004613
      0.89% cov
    • Alignment Length
      35 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:261858111
      AB527414
    • Hit length
      2,078 bp
    • E Value
      3.34E-5
    • BLAST Score
      54 bits
    • Similarity
      94.29%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      AB527414
      1.68% cov
    • Alignment Length
      35 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297707060
      XM_002830291
      1 of 6 hits reported for Pongo abelii.
    • Hit length
      3,702 bp
    • E Value
      8.15E-3
    • BLAST Score
      46.1 bits
    • Similarity
      91.43%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XM_002830291
      0.95% cov
    • Alignment Length
      35 bp
Occurrence
6 times in PatSeqDB
Tools
SEQ ID NO
9
Length
32
Sequence Type
DNA
Locations
Undetermined
Declared organism
Artificial
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:39777596
      NM_004613
      1 of 16 hits reported for Homo sapiens.
    • Hit length
      3,937 bp
    • E Value
      1.65E-3
    • BLAST Score
      48.1 bits
    • Similarity
      93.75%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      NM_004613
      0.81% cov
    • Alignment Length
      32 bp
    • CIGAR string
      16M2N14M mismatches: 2 - insertions: 0 - deletions: 0
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:325464540
      JF432824
      1 of 2 hits reported for synthetic construct.
    • Hit length
      1,746 bp
    • E Value
      1.65E-3
    • BLAST Score
      48.1 bits
    • Similarity
      93.75%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      JF432824
      1.83% cov
    • Alignment Length
      32 bp
    • CIGAR string
      16M2N14M mismatches: 2 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297707060
      XM_002830291
      1 of 5 hits reported for Pongo abelii.
    • Hit length
      3,702 bp
    • E Value
      4.02E-1
    • BLAST Score
      40.1 bits
    • Similarity
      90.62%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XM_002830291
      0.86% cov
    • Alignment Length
      32 bp
Occurrence
6 times in PatSeqDB
Tools
SEQ ID NO
10
Length
32
Sequence Type
DNA
Locations
Undetermined
Declared organism
Artificial
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:39777596
      NM_004613
      1 of 16 hits reported for Homo sapiens.
    • Hit length
      3,937 bp
    • E Value
      1.65E-3
    • BLAST Score
      48.1 bits
    • Similarity
      93.75%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      NM_004613
      0.81% cov
    • Alignment Length
      32 bp
    • CIGAR string
      14M2N16M mismatches: 2 - insertions: 0 - deletions: 0
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:325464540
      JF432824
      1 of 2 hits reported for synthetic construct.
    • Hit length
      1,746 bp
    • E Value
      1.65E-3
    • BLAST Score
      48.1 bits
    • Similarity
      93.75%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      JF432824
      1.83% cov
    • Alignment Length
      32 bp
    • CIGAR string
      14M2N16M mismatches: 2 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297707060
      XM_002830291
      1 of 5 hits reported for Pongo abelii.
    • Hit length
      3,702 bp
    • E Value
      4.02E-1
    • BLAST Score
      40.1 bits
    • Similarity
      90.62%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XM_002830291
      0.86% cov
    • Alignment Length
      32 bp
Occurrence
6 times in PatSeqDB
Tools

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