WO 2010/116196 A2 - Diagnosisof And Treatment Gluten-induced Autoimmune Diseases - The Lens

Diagnosisof And Treatment Gluten-induced Autoimmune Diseases

Published: Oct 14, 2010
Earliest Priority: Apr 01 2009
Family: 8
Cited Works: 83
Cited by: 4
Cites: 0
Sequences: 20
Additional Info: Cited Works Full text Published Sequence

Data obtained from: EPO Sequence Listings DDBJ Pat EMBL-EBI Pat NCBI GenBank (EBI)

20 sequences found in this patent (in total)

Download sequences in fasta format: 4 peptides 16 DNAs

Displaying 1 - 10 of 20 sequences

SEQ ID NO

Length

Sequence Type

Locations

Declared organism

Determined organism

Occurrence

Tools

SEQ ID NO

Length

Sequence Type

DNA

Locations

Undetermined

Declared organism

Artificial

Determined organism

Occurrence

6 times in PatSeqDB

in 3 families
in 6 documents

Tools

SEQ ID NO

Length

Sequence Type

DNA

Locations

Undetermined

Declared organism

Artificial

Determined organism

Occurrence

6 times in PatSeqDB

in 3 families
in 6 documents

Tools

SEQ ID NO

Length

Sequence Type

DNA

Locations

Undetermined

Declared organism

Artificial

Determined organism

Nomascus leucogenys
Nomascus leucogenys
Public DB hit
GI:332209029
XM_003253565
1 of 2 hits reported for Nomascus leucogenys.

Hit length
3,931 bp

E Value
3.34E-5

BLAST Score
54 bits

Similarity

94.29%

Coverage

100%

Alignment (schematic)

SEQ ID NO 3

100% cov
XM_003253565

0.89% cov

Alignment Length
35 bp

CIGAR string
16MNMN16M mismatches: 2 - insertions: 0 - deletions: 0
Pongo abelii
Pongo abelii
Public DB hit
GI:297707058
XM_002830290
1 of 4 hits reported for Pongo abelii.

Hit length
3,667 bp

E Value
3.34E-5

BLAST Score
54 bits

Similarity

94.29%

Coverage

100%

Alignment (schematic)

SEQ ID NO 3

100% cov
XM_002830290

0.95% cov

Alignment Length
35 bp

CIGAR string
16MNMN16M mismatches: 2 - insertions: 0 - deletions: 0
Macaca mulatta
Macaca mulatta
Public DB hit
GI:297259842
XM_001095155
1 of 2 hits reported for Macaca mulatta.

Hit length
1,959 bp

E Value
3.34E-5

BLAST Score
54 bits

Similarity

94.29%

Coverage

100%

Alignment (schematic)

SEQ ID NO 3

100% cov
XM_001095155

1.79% cov

Alignment Length
35 bp
Oryctolagus cuniculus
Oryctolagus cuniculus
Public DB hit
GI:291388604
XM_002710813
1 of 2 hits reported for Oryctolagus cuniculus.

Hit length
2,708 bp

E Value
3.34E-5

BLAST Score
54 bits

Similarity

94.29%

Coverage

100%

Alignment (schematic)

SEQ ID NO 3

100% cov
XM_002710813

1.29% cov

Alignment Length
35 bp
Homo sapiens
Homo sapiens
Public DB hit
GI:39777596
NM_004613
1 of 12 hits reported for Homo sapiens.

Hit length
3,937 bp

E Value
3.34E-5

BLAST Score
54 bits

Similarity

94.29%

Coverage

100%

Alignment (schematic)

SEQ ID NO 3

100% cov
NM_004613

0.89% cov

Alignment Length
35 bp
synthetic construct
synthetic construct
Public DB hit
GI:325464540
JF432824
1 of 3 hits reported for synthetic construct.

Hit length
1,746 bp

E Value
3.34E-5

BLAST Score
54 bits

Similarity

94.29%

Coverage

100%

Alignment (schematic)

SEQ ID NO 3

100% cov
JF432824

2% cov

Alignment Length
35 bp

Occurrence

6 times in PatSeqDB

in 3 families
in 6 documents

Tools

SEQ ID NO

Length

Sequence Type

DNA

Locations

Undetermined

Declared organism

Artificial

Determined organism

Nomascus leucogenys
Nomascus leucogenys
Public DB hit
GI:332209029
XM_003253565
1 of 2 hits reported for Nomascus leucogenys.

Hit length
3,931 bp

E Value
3.34E-5

BLAST Score
54 bits

Similarity

94.29%

Coverage

100%

Alignment (schematic)

SEQ ID NO 4

100% cov
XM_003253565

0.89% cov

Alignment Length
35 bp

CIGAR string
16MNMN16M mismatches: 2 - insertions: 0 - deletions: 0
Pongo abelii
Pongo abelii
Public DB hit
GI:297707058
XM_002830290
1 of 4 hits reported for Pongo abelii.

Hit length
3,667 bp

E Value
3.34E-5

BLAST Score
54 bits

Similarity

94.29%

Coverage

100%

Alignment (schematic)

SEQ ID NO 4

100% cov
XM_002830290

0.95% cov

Alignment Length
35 bp

CIGAR string
16MNMN16M mismatches: 2 - insertions: 0 - deletions: 0
Macaca mulatta
Macaca mulatta
Public DB hit
GI:297259842
XM_001095155
1 of 2 hits reported for Macaca mulatta.

Hit length
1,959 bp

E Value
3.34E-5

BLAST Score
54 bits

Similarity

94.29%

Coverage

100%

Alignment (schematic)

SEQ ID NO 4

100% cov
XM_001095155

1.79% cov

Alignment Length
35 bp
Oryctolagus cuniculus
Oryctolagus cuniculus
Public DB hit
GI:291388604
XM_002710813
1 of 2 hits reported for Oryctolagus cuniculus.

Hit length
2,708 bp

E Value
3.34E-5

BLAST Score
54 bits

Similarity

94.29%

Coverage

100%

Alignment (schematic)

SEQ ID NO 4

100% cov
XM_002710813

1.29% cov

Alignment Length
35 bp
Homo sapiens
Homo sapiens
Public DB hit
GI:39777596
NM_004613
1 of 12 hits reported for Homo sapiens.

Hit length
3,937 bp

E Value
3.34E-5

BLAST Score
54 bits

Similarity

94.29%

Coverage

100%

Alignment (schematic)

SEQ ID NO 4

100% cov
NM_004613

0.89% cov

Alignment Length
35 bp
synthetic construct
synthetic construct
Public DB hit
GI:325464540
JF432824
1 of 3 hits reported for synthetic construct.

Hit length
1,746 bp

E Value
3.34E-5

BLAST Score
54 bits

Similarity

94.29%

Coverage

100%

Alignment (schematic)

SEQ ID NO 4

100% cov
JF432824

2% cov

Alignment Length
35 bp

Occurrence

6 times in PatSeqDB

in 3 families
in 6 documents

Tools

SEQ ID NO

Length

Sequence Type

DNA

Locations

Undetermined

Declared organism

Artificial

Determined organism

Pan troglodytes
Pan troglodytes
Public DB hit
GI:332858422
XM_525321
1 of 4 hits reported for Pan troglodytes.

Hit length
3,712 bp

E Value
3.01E-2

BLAST Score
44.1 bits

Similarity

91.18%

Coverage

100%

Alignment (schematic)

SEQ ID NO 5

100% cov
XM_525321

0.92% cov

Alignment Length
34 bp

CIGAR string
18M3N13M mismatches: 3 - insertions: 0 - deletions: 0
Nomascus leucogenys
Nomascus leucogenys
Public DB hit
GI:332209029
XM_003253565
1 of 2 hits reported for Nomascus leucogenys.

Hit length
3,931 bp

E Value
3.01E-2

BLAST Score
44.1 bits

Similarity

91.18%

Coverage

100%

Alignment (schematic)

SEQ ID NO 5

100% cov
XM_003253565

0.86% cov

Alignment Length
34 bp

CIGAR string
18M3N13M mismatches: 3 - insertions: 0 - deletions: 0
Pongo abelii
Pongo abelii
Public DB hit
GI:297707060
XM_002830291
1 of 6 hits reported for Pongo abelii.

Hit length
3,702 bp

E Value
3.01E-2

BLAST Score
44.1 bits

Similarity

91.18%

Coverage

100%

Alignment (schematic)

SEQ ID NO 5

100% cov
XM_002830291

0.92% cov

Alignment Length
34 bp
Callithrix jacchus
Callithrix jacchus
Public DB hit
GI:296200429
XM_002747551
1 of 2 hits reported for Callithrix jacchus.

Hit length
2,129 bp

E Value
3.01E-2

BLAST Score
44.1 bits

Similarity

91.18%

Coverage

100%

Alignment (schematic)

SEQ ID NO 5

100% cov
XM_002747551

1.6% cov

Alignment Length
34 bp
Homo sapiens
Homo sapiens
Public DB hit
GI:39777596
NM_004613
1 of 9 hits reported for Homo sapiens.

Hit length
3,937 bp

E Value
3.01E-2

BLAST Score
44.1 bits

Similarity

91.18%

Coverage

100%

Alignment (schematic)

SEQ ID NO 5

100% cov
NM_004613

0.86% cov

Alignment Length
34 bp
synthetic construct
synthetic construct
Public DB hit
GI:325464540
JF432824
1 of 2 hits reported for synthetic construct.

Hit length
1,746 bp

E Value
3.01E-2

BLAST Score
44.1 bits

Similarity

91.18%

Coverage

100%

Alignment (schematic)

SEQ ID NO 5

100% cov
JF432824

1.95% cov

Alignment Length
34 bp

Occurrence

6 times in PatSeqDB

in 3 families
in 6 documents

Tools

SEQ ID NO

Length

Sequence Type

DNA

Locations

Undetermined

Declared organism

Artificial

Determined organism

Pan troglodytes
Pan troglodytes
Public DB hit
GI:332858422
XM_525321
1 of 4 hits reported for Pan troglodytes.

Hit length
3,712 bp

E Value
3.01E-2

BLAST Score
44.1 bits

Similarity

91.18%

Coverage

100%

Alignment (schematic)

SEQ ID NO 6

100% cov
XM_525321

0.92% cov

Alignment Length
34 bp

CIGAR string
13M3N18M mismatches: 3 - insertions: 0 - deletions: 0
Nomascus leucogenys
Nomascus leucogenys
Public DB hit
GI:332209029
XM_003253565
1 of 2 hits reported for Nomascus leucogenys.

Hit length
3,931 bp

E Value
3.01E-2

BLAST Score
44.1 bits

Similarity

91.18%

Coverage

100%

Alignment (schematic)

SEQ ID NO 6

100% cov
XM_003253565

0.86% cov

Alignment Length
34 bp

CIGAR string
13M3N18M mismatches: 3 - insertions: 0 - deletions: 0
Pongo abelii
Pongo abelii
Public DB hit
GI:297707060
XM_002830291
1 of 6 hits reported for Pongo abelii.

Hit length
3,702 bp

E Value
3.01E-2

BLAST Score
44.1 bits

Similarity

91.18%

Coverage

100%

Alignment (schematic)

SEQ ID NO 6

100% cov
XM_002830291

0.92% cov

Alignment Length
34 bp
Callithrix jacchus
Callithrix jacchus
Public DB hit
GI:296200429
XM_002747551
1 of 2 hits reported for Callithrix jacchus.

Hit length
2,129 bp

E Value
3.01E-2

BLAST Score
44.1 bits

Similarity

91.18%

Coverage

100%

Alignment (schematic)

SEQ ID NO 6

100% cov
XM_002747551

1.6% cov

Alignment Length
34 bp
Homo sapiens
Homo sapiens
Public DB hit
GI:39777596
NM_004613
1 of 9 hits reported for Homo sapiens.

Hit length
3,937 bp

E Value
3.01E-2

BLAST Score
44.1 bits

Similarity

91.18%

Coverage

100%

Alignment (schematic)

SEQ ID NO 6

100% cov
NM_004613

0.86% cov

Alignment Length
34 bp
synthetic construct
synthetic construct
Public DB hit
GI:325464540
JF432824
1 of 2 hits reported for synthetic construct.

Hit length
1,746 bp

E Value
3.01E-2

BLAST Score
44.1 bits

Similarity

91.18%

Coverage

100%

Alignment (schematic)

SEQ ID NO 6

100% cov
JF432824

1.95% cov

Alignment Length
34 bp

Occurrence

6 times in PatSeqDB

in 3 families
in 6 documents

Tools

SEQ ID NO

Length

Sequence Type

DNA

Locations

Undetermined

Declared organism

Artificial

Determined organism

Occurrence

6 times in PatSeqDB

in 3 families
in 6 documents

Tools

SEQ ID NO

Length

Sequence Type

DNA

Locations

Undetermined

Declared organism

Artificial

Determined organism

Occurrence

6 times in PatSeqDB

in 3 families
in 6 documents

Tools

SEQ ID NO

Length

Sequence Type

DNA

Locations

Undetermined

Declared organism

Artificial

Determined organism

Occurrence

6 times in PatSeqDB

in 3 families
in 6 documents

Tools

SEQ ID NO

Length

Sequence Type

DNA

Locations

Undetermined

Declared organism

Artificial

Determined organism

Occurrence

6 times in PatSeqDB

in 3 families
in 6 documents

Tools

20 sequences found in this patent (in total)

Filter sequences

Displaying 1 - 10 of 20 sequences

Nomascus leucogenys

Public DB hit

Hit length

E Value

BLAST Score

Similarity

Coverage

Alignment (schematic)

Alignment Length

CIGAR string

Pongo abelii

Public DB hit

Hit length

E Value

BLAST Score

Similarity

Coverage

Alignment (schematic)

Alignment Length

CIGAR string

Macaca mulatta

Public DB hit

Hit length

E Value

BLAST Score

Similarity

Coverage

Alignment (schematic)

Alignment Length

Oryctolagus cuniculus

Public DB hit

Hit length

E Value

BLAST Score

Similarity

Coverage

Alignment (schematic)

Alignment Length

Homo sapiens

Public DB hit

Hit length

E Value

BLAST Score

Similarity

Coverage

Alignment (schematic)

Alignment Length

synthetic construct

Public DB hit

Hit length

E Value

BLAST Score

Similarity

Coverage

Alignment (schematic)

Alignment Length

Nomascus leucogenys

Public DB hit

Hit length

E Value

BLAST Score

Similarity

Coverage

Alignment (schematic)

Alignment Length

CIGAR string

Pongo abelii

Public DB hit

Hit length

E Value

BLAST Score

Similarity

Coverage

Alignment (schematic)

Alignment Length

CIGAR string

Macaca mulatta