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Search for Biological Sequences disclosed in Patents

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Data obtained from: DDBJ Pat NCBI GenBank USPTO Fulltext EMBL-EBI Pat
162 sequences found in this patent (in total)

Displaying 1 - 10 of 162 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
6
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Occurrence
38 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
20
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • uncultured bacterium

    uncultured bacterium

    • Public DB hit
      GI:269993093
      FN597248
    • Hit length
      531 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      FN597248
      3.77% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:208226
      M65236
      1 of 3 hits reported for synthetic construct.
    • Hit length
      192 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      M65236
      10.42% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Escherichia coli

    Escherichia coli

    • Public DB hit
      GI:260617891
      GQ906578
    • Hit length
      1,749 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      95%
    • Alignment (schematic)

      SEQ ID NO 2
      95% cov
      GQ906578
      1.09% cov
    • Alignment Length
      19 bp
    • CIGAR string
      19M1H mismatches: 0 - insertions: 0 - deletions: 0
  • recombinant coronavirus

    recombinant coronavirus

    • Public DB hit
      GI:213990625
      FJ211861
    • Hit length
      27,709 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      95%
    • Alignment (schematic)

      SEQ ID NO 2
      95% cov
      FJ211861
      0.07% cov
    • Alignment Length
      19 bp
  • Cloning vector pGloSensor-10F[TEV]

    Cloning vector pGloSensor-10F[TEV]

    • Public DB hit
      GI:190888543
      EU693493
    • Hit length
      4,989 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      95%
    • Alignment (schematic)

      SEQ ID NO 2
      95% cov
      EU693493
      0.38% cov
    • Alignment Length
      19 bp
  • Cloning vector pGloSensor-10F

    Cloning vector pGloSensor-10F

    • Public DB hit
      GI:190888540
      EU693492
    • Hit length
      4,968 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      95%
    • Alignment (schematic)

      SEQ ID NO 2
      95% cov
      EU693492
      0.38% cov
    • Alignment Length
      19 bp
  • Plasmodiophora brassicae

    Plasmodiophora brassicae

    • Public DB hit
      GI:162138602
      AM411675
    • Hit length
      4,006 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      95%
    • Alignment (schematic)

      SEQ ID NO 2
      95% cov
      AM411675
      0.47% cov
    • Alignment Length
      19 bp
  • Spodoptera frugiperda

    Spodoptera frugiperda

    • Public DB hit
      GI:119371774
      AJ871196
    • Hit length
      1,024 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      95%
    • Alignment (schematic)

      SEQ ID NO 2
      95% cov
      AJ871196
      1.86% cov
    • Alignment Length
      19 bp
  • Flexi vector pF3K WG (BYDV)

    Flexi vector pF3K WG (BYDV)

    • Public DB hit
      GI:62275819
      AY949044
    • Hit length
      3,684 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      95%
    • Alignment (schematic)

      SEQ ID NO 2
      95% cov
      AY949044
      0.52% cov
    • Alignment Length
      19 bp
  • Flexi vector pF3A WG (BYDV)

    Flexi vector pF3A WG (BYDV)

    • Public DB hit
      GI:62275796
      AY949043
    • Hit length
      3,689 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      95%
    • Alignment (schematic)

      SEQ ID NO 2
      95% cov
      AY949043
      0.52% cov
    • Alignment Length
      19 bp
Occurrence
13 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
3
Length
21
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Thermobia domestica

    Thermobia domestica

    • Public DB hit
      GI:295016224
      FN562989
    • Hit length
      1,453 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      FN562989
      1.45% cov
    • Alignment Length
      21 bp
    • CIGAR string
      21M mismatches: 0 - insertions: 0 - deletions: 0
  • Salmonella phage phiSG-JL2

    Salmonella phage phiSG-JL2

    • Public DB hit
      GI:189212562
      EU547803
    • Hit length
      38,815 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      EU547803
      0.05% cov
    • Alignment Length
      21 bp
    • CIGAR string
      21M mismatches: 0 - insertions: 0 - deletions: 0
  • Crassostrea gigas

    Crassostrea gigas

    • Public DB hit
      GI:30577616
      AJ544074
    • Hit length
      11,567 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      AJ544074
      0.18% cov
    • Alignment Length
      21 bp
    • CIGAR string
      21M mismatches: 0 - insertions: 0 - deletions: 0
  • Yersinia phage phiYeO3-12

    Yersinia phage phiYeO3-12

    • Public DB hit
      GI:6598981
      AJ251805
    • Hit length
      39,600 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      AJ251805
      0.05% cov
    • Alignment Length
      21 bp
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:2804575
      AB005559
      1 of 2 hits reported for Mus musculus.
    • Hit length
      7,846 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      AB005559
      0.27% cov
    • Alignment Length
      21 bp
  • Cloning vector pZEO

    Cloning vector pZEO

    • Public DB hit
      GI:557208
      L36849
      1 of 2 hits reported for Cloning vector pZEO.
    • Hit length
      3,451 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      L36849
      0.61% cov
    • Alignment Length
      21 bp
  • Cloning vector pGEMEX-2

    Cloning vector pGEMEX-2

    • Public DB hit
      GI:8216954
      X65318
    • Hit length
      3,995 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      X65318
      0.53% cov
    • Alignment Length
      21 bp
  • Cloning vector pGEMEX-1

    Cloning vector pGEMEX-1

    • Public DB hit
      GI:8216952
      X65317
    • Hit length
      3,993 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      X65317
      0.53% cov
    • Alignment Length
      21 bp
  • Spodoptera frugiperda

    Spodoptera frugiperda

    • Public DB hit
      GI:2245567
      AF005034
    • Hit length
      3,748 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      AF005034
      0.56% cov
    • Alignment Length
      21 bp
  • Culex quinquefasciatus

    Culex quinquefasciatus

    • Public DB hit
      GI:170052793
      XM_001862348
    • Hit length
      827 bp
    • E Value
      1.01E-1
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      95.24%
    • Alignment (schematic)

      SEQ ID NO 3
      95.24% cov
      XM_001862348
      2.42% cov
    • Alignment Length
      20 bp
  • Cryptosporidium hominis TU502

    Cryptosporidium hominis TU502

    • Public DB hit
      GI:67581119
      XM_659743
    • Hit length
      387 bp
    • E Value
      1.01E-1
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      95.24%
    • Alignment (schematic)

      SEQ ID NO 3
      95.24% cov
      XM_659743
      5.17% cov
    • Alignment Length
      20 bp
  • Cloning vector pBOB

    Cloning vector pBOB

    • Public DB hit
      GI:335355349
      JF927991
    • Hit length
      8,730 bp
    • E Value
      1.01E-1
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      95.24%
    • Alignment (schematic)

      SEQ ID NO 3
      95.24% cov
      JF927991
      0.23% cov
    • Alignment Length
      20 bp
  • Cloning vector pPLV34

    Cloning vector pPLV34

    • Public DB hit
      GI:334085873
      JF909487
    • Hit length
      5,606 bp
    • E Value
      1.01E-1
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      95.24%
    • Alignment (schematic)

      SEQ ID NO 3
      95.24% cov
      JF909487
      0.36% cov
    • Alignment Length
      20 bp
  • Cloning vector pPLV33

    Cloning vector pPLV33

    • Public DB hit
      GI:334085870
      JF909486
    • Hit length
      5,251 bp
    • E Value
      1.01E-1
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      95.24%
    • Alignment (schematic)

      SEQ ID NO 3
      95.24% cov
      JF909486
      0.38% cov
    • Alignment Length
      20 bp
  • Cloning vector pPLV32

    Cloning vector pPLV32

    • Public DB hit
      GI:334085867
      JF909485
    • Hit length
      4,898 bp
    • E Value
      1.01E-1
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      95.24%
    • Alignment (schematic)

      SEQ ID NO 3
      95.24% cov
      JF909485
      0.41% cov
    • Alignment Length
      20 bp
  • Cloning vector pPLV31

    Cloning vector pPLV31

    • Public DB hit
      GI:334085864
      JF909484
    • Hit length
      9,507 bp
    • E Value
      1.01E-1
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      95.24%
    • Alignment (schematic)

      SEQ ID NO 3
      95.24% cov
      JF909484
      0.21% cov
    • Alignment Length
      20 bp
  • Cloning vector pPLV30

    Cloning vector pPLV30

    • Public DB hit
      GI:334085861
      JF909483
    • Hit length
      9,152 bp
    • E Value
      1.01E-1
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      95.24%
    • Alignment (schematic)

      SEQ ID NO 3
      95.24% cov
      JF909483
      0.22% cov
    • Alignment Length
      20 bp
  • Cloning vector pPLV29

    Cloning vector pPLV29

    • Public DB hit
      GI:334085858
      JF909482
    • Hit length
      8,799 bp
    • E Value
      1.01E-1
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      95.24%
    • Alignment (schematic)

      SEQ ID NO 3
      95.24% cov
      JF909482
      0.23% cov
    • Alignment Length
      20 bp
  • Cloning vector pPLV28

    Cloning vector pPLV28

    • Public DB hit
      GI:334085855
      JF909481
    • Hit length
      6,389 bp
    • E Value
      1.01E-1
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      95.24%
    • Alignment (schematic)

      SEQ ID NO 3
      95.24% cov
      JF909481
      0.31% cov
    • Alignment Length
      20 bp
  • Cloning vector pPLV27

    Cloning vector pPLV27

    • Public DB hit
      GI:334085852
      JF909480
    • Hit length
      6,750 bp
    • E Value
      1.01E-1
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      95.24%
    • Alignment (schematic)

      SEQ ID NO 3
      95.24% cov
      JF909480
      0.3% cov
    • Alignment Length
      20 bp
  • Cloning vector pPLV26

    Cloning vector pPLV26

    • Public DB hit
      GI:334085849
      JF909479
    • Hit length
      6,395 bp
    • E Value
      1.01E-1
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      95.24%
    • Alignment (schematic)

      SEQ ID NO 3
      95.24% cov
      JF909479
      0.31% cov
    • Alignment Length
      20 bp
  • Cloning vector pPLV25

    Cloning vector pPLV25

    • Public DB hit
      GI:334085846
      JF909478
    • Hit length
      6,042 bp
    • E Value
      1.01E-1
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      95.24%
    • Alignment (schematic)

      SEQ ID NO 3
      95.24% cov
      JF909478
      0.33% cov
    • Alignment Length
      20 bp
  • Cloning vector pPLV24

    Cloning vector pPLV24

    • Public DB hit
      GI:334085842
      JF909477
    • Hit length
      6,862 bp
    • E Value
      1.01E-1
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      95.24%
    • Alignment (schematic)

      SEQ ID NO 3
      95.24% cov
      JF909477
      0.29% cov
    • Alignment Length
      20 bp
Occurrence
13 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
4
Length
6
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Occurrence
14 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
5
Length
29
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
Occurrence
8 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
6
Length
30
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
Occurrence
8 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
7
Length
24
Type
nucleotide
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:28380636
      NG_000007
      1 of 4 hits reported for Homo sapiens.
    • Hit length
      81,706 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NG_000007
      0.03% cov
    • Alignment Length
      24 bp
    • CIGAR string
      24M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332211536
      XM_003254826
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      871 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XM_003254826
      2.76% cov
    • Alignment Length
      24 bp
    • CIGAR string
      24M mismatches: 0 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297689471
      XM_002822126
      1 of 3 hits reported for Pongo abelii.
    • Hit length
      877 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XM_002822126
      2.74% cov
    • Alignment Length
      24 bp
    • CIGAR string
      24M mismatches: 0 - insertions: 0 - deletions: 0
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296217289
      XM_002754893
      1 of 2 hits reported for Callithrix jacchus.
    • Hit length
      614 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XM_002754893
      3.91% cov
    • Alignment Length
      24 bp
  • Papio anubis

    Papio anubis

    • Public DB hit
      GI:281182382
      NM_001168851
      1 of 2 hits reported for Papio anubis.
    • Hit length
      444 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NM_001168851
      5.41% cov
    • Alignment Length
      24 bp
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:209447100
      NM_001135832
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      444 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NM_001135832
      5.41% cov
    • Alignment Length
      24 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:114051004
      NM_001047147
    • Hit length
      444 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NM_001047147
      5.41% cov
    • Alignment Length
      24 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:157928891
      EU176280
      1 of 2 hits reported for synthetic construct.
    • Hit length
      484 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      EU176280
      4.96% cov
    • Alignment Length
      24 bp
  • Callithrix argentata

    Callithrix argentata

    • Public DB hit
      GI:66474335
      AY927310
    • Hit length
      286 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      AY927310
      8.39% cov
    • Alignment Length
      24 bp
  • Macaca fuscata

    Macaca fuscata

    • Public DB hit
      GI:66474333
      AY927309
    • Hit length
      280 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      AY927309
      8.57% cov
    • Alignment Length
      24 bp
  • Erythrocebus patas

    Erythrocebus patas

    • Public DB hit
      GI:66474331
      AY927308
      1 of 2 hits reported for Erythrocebus patas.
    • Hit length
      253 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      AY927308
      9.49% cov
    • Alignment Length
      24 bp
  • Semnopithecus entellus

    Semnopithecus entellus

    • Public DB hit
      GI:66474329
      AY927307
    • Hit length
      249 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      AY927307
      9.64% cov
    • Alignment Length
      24 bp
  • Presbytis melalophos

    Presbytis melalophos

    • Public DB hit
      GI:66474327
      AY927306
    • Hit length
      280 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      AY927306
      8.57% cov
    • Alignment Length
      24 bp
  • Papio hamadryas

    Papio hamadryas

    • Public DB hit
      GI:66474325
      AY927305
    • Hit length
      250 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      AY927305
      9.6% cov
    • Alignment Length
      24 bp
Occurrence
8 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
8
Length
23
Type
nucleotide
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:28380636
      NG_000007
      1 of 9 hits reported for Homo sapiens.
    • Hit length
      81,706 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NG_000007
      0.03% cov
    • Alignment Length
      23 bp
    • CIGAR string
      23M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332211536
      XM_003254826
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      871 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XM_003254826
      2.64% cov
    • Alignment Length
      23 bp
    • CIGAR string
      23M mismatches: 0 - insertions: 0 - deletions: 0
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:77797851
      AC170422
      1 of 4 hits reported for Macaca mulatta.
    • Hit length
      185,455 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      AC170422
      0.01% cov
    • Alignment Length
      23 bp
  • Cheirogaleus medius

    Cheirogaleus medius

    • Public DB hit
      GI:340627
      M15758
    • Hit length
      1,899 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      M15758
      1.21% cov
    • Alignment Length
      23 bp
  • Eulemur macaco

    Eulemur macaco

    • Public DB hit
      GI:340625
      M15757
    • Hit length
      1,757 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      M15757
      1.31% cov
    • Alignment Length
      23 bp
  • Gorilla gorilla

    Gorilla gorilla

    • Public DB hit
      GI:177039
      M81363
    • Hit length
      1,815 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      M81363
      1.27% cov
    • Alignment Length
      23 bp
  • Hylobates lar

    Hylobates lar

    • Public DB hit
      GI:177006
      M81377
    • Hit length
      3,735 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      M81377
      0.62% cov
    • Alignment Length
      23 bp
  • Pan paniscus

    Pan paniscus

    • Public DB hit
      GI:176637
      M81362
    • Hit length
      1,814 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      M81362
      1.27% cov
    • Alignment Length
      23 bp
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:176636
      M81361
      1 of 3 hits reported for Pan troglodytes.
    • Hit length
      1,818 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      M81361
      1.27% cov
    • Alignment Length
      23 bp
  • Papio anubis

    Papio anubis

    • Public DB hit
      GI:281182382
      NM_001168851
      1 of 2 hits reported for Papio anubis.
    • Hit length
      444 bp
    • E Value
      8.59E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      95.65%
    • Alignment (schematic)

      SEQ ID NO 8
      95.65% cov
      NM_001168851
      4.95% cov
    • Alignment Length
      22 bp
Occurrence
8 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
9
Length
21
Type
nucleotide
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:28380636
      NG_000007
      1 of 18 hits reported for Homo sapiens.
    • Hit length
      81,706 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      NG_000007
      0.03% cov
    • Alignment Length
      21 bp
    • CIGAR string
      21M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:209447098
      NM_001071779
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      444 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      NM_001071779
      4.73% cov
    • Alignment Length
      21 bp
    • CIGAR string
      21M mismatches: 0 - insertions: 0 - deletions: 0
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:123998836
      DQ896048
      1 of 4 hits reported for synthetic construct.
    • Hit length
      484 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      DQ896048
      4.34% cov
    • Alignment Length
      21 bp
  • Bradypus tridactylus

    Bradypus tridactylus

    • Public DB hit
      GI:71066827
      DQ091214
    • Hit length
      1,318 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      DQ091214
      1.59% cov
    • Alignment Length
      21 bp
Occurrence
8 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
10
Length
22
Type
nucleotide
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:28380636
      NG_000007
      1 of 11 hits reported for Homo sapiens.
    • Hit length
      81,706 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      NG_000007
      0.03% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332836062
      XR_128327
      1 of 4 hits reported for Pan troglodytes.
    • Hit length
      802 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XR_128327
      2.74% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332211540
      XM_003254828
      1 of 6 hits reported for Nomascus leucogenys.
    • Hit length
      640 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XM_003254828
      3.44% cov
    • Alignment Length
      22 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297268602
      XR_091601
      1 of 4 hits reported for Macaca mulatta.
    • Hit length
      969 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XR_091601
      2.27% cov
    • Alignment Length
      22 bp
Occurrence
8 times in PatSeqDB
Tools
PatSeq Finder

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