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Search for Biological Sequences disclosed in Patents

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Data obtained from: DDBJ Pat NCBI GenBank (EBI) WIPO-PCT EMBL-EBI Pat EPO Sequence Listings
12 sequences found in this patent (in total)

Displaying 1 - 10 of 12 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
19
Type
DNA
Locations
Fulltext

Declared organism:
Artificial

Determined organism:
  • Dictyostelium purpureum

    Dictyostelium purpureum

    • Public DB hit
      GI:330846871
      XM_003295168
    • Hit length
      285 bp
    • E Value
      1.8E0
    • BLAST Score
      35.4 bits
    • Similarity
      94.74%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XM_003295168
      6.67% cov
    • Alignment Length
      19 bp
    • CIGAR string
      8MN10M mismatches: 1 - insertions: 0 - deletions: 0
  • Acyrthosiphon pisum

    Acyrthosiphon pisum

    • Public DB hit
      GI:328725684
      XR_119642
      1 of 22 hits reported for Acyrthosiphon pisum.
    • Hit length
      502 bp
    • E Value
      1.8E0
    • BLAST Score
      35.4 bits
    • Similarity
      94.74%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XR_119642
      3.78% cov
    • Alignment Length
      19 bp
    • CIGAR string
      8MN10M mismatches: 1 - insertions: 0 - deletions: 0
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:328447215
      NR_003278
    • Hit length
      1,849 bp
    • E Value
      1.8E0
    • BLAST Score
      35.4 bits
    • Similarity
      94.74%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      NR_003278
      1.03% cov
    • Alignment Length
      19 bp
  • Danio rerio

    Danio rerio

    • Public DB hit
      GI:326677451
      XM_003200788
    • Hit length
      1,985 bp
    • E Value
      1.8E0
    • BLAST Score
      35.4 bits
    • Similarity
      94.74%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XM_003200788
      0.96% cov
    • Alignment Length
      19 bp
Occurrence
342 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
20
Type
DNA
Locations
Fulltext

Declared organism:
Artificial

Occurrence
281 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
3
Length
20
Type
DNA
Locations
Fulltext

Declared organism:
Artificial

Determined organism:
  • Corynebacterium pseudotuberculosis

    Corynebacterium pseudotuberculosis

    • Public DB hit
      GI:310975206
      NR_037070
    • Hit length
      1,396 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NR_037070
      1.43% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • [Clostridium] xylanolyticum

    [Clostridium] xylanolyticum

    • Public DB hit
      GI:310975204
      NR_037068
    • Hit length
      1,441 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NR_037068
      1.39% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Burkholderia glathei

    Burkholderia glathei

    • Public DB hit
      GI:310975201
      NR_037065
    • Hit length
      1,578 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NR_037065
      1.27% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Mycoplasma capricolum subsp. capripneumoniae

    Mycoplasma capricolum subsp. capripneumoniae

    • Public DB hit
      GI:310975197
      NR_037061
    • Hit length
      1,522 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NR_037061
      1.31% cov
    • Alignment Length
      20 bp
  • Tissierella creatinophila

    Tissierella creatinophila

    • Public DB hit
      GI:310975164
      NR_037028
    • Hit length
      1,332 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NR_037028
      1.5% cov
    • Alignment Length
      20 bp
  • Staphylococcus schleiferi subsp. schleiferi

    Staphylococcus schleiferi subsp. schleiferi

    • Public DB hit
      GI:310975145
      NR_037009
    • Hit length
      1,527 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NR_037009
      1.31% cov
    • Alignment Length
      20 bp
  • Desulfotomaculum australicum

    Desulfotomaculum australicum

    • Public DB hit
      GI:310975144
      NR_037008
    • Hit length
      1,561 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NR_037008
      1.28% cov
    • Alignment Length
      20 bp
  • Staphylococcus aureus subsp. aureus

    Staphylococcus aureus subsp. aureus

    • Public DB hit
      GI:310975143
      NR_037007
    • Hit length
      1,555 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NR_037007
      1.29% cov
    • Alignment Length
      20 bp
  • Lactobacillus diolivorans

    Lactobacillus diolivorans

    • Public DB hit
      GI:310975140
      NR_037004
    • Hit length
      1,401 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NR_037004
      1.43% cov
    • Alignment Length
      20 bp
  • Propionibacterium freudenreichii subsp. shermanii

    Propionibacterium freudenreichii subsp. shermanii

    • Public DB hit
      GI:310975108
      NR_036972
    • Hit length
      1,510 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NR_036972
      1.32% cov
    • Alignment Length
      20 bp
  • Bradyrhizobium elkanii

    Bradyrhizobium elkanii

    • Public DB hit
      GI:310975089
      NR_036953
    • Hit length
      1,480 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NR_036953
      1.35% cov
    • Alignment Length
      20 bp
  • Clostridium saccharobutylicum

    Clostridium saccharobutylicum

    • Public DB hit
      GI:310975087
      NR_036951
    • Hit length
      1,381 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NR_036951
      1.45% cov
    • Alignment Length
      20 bp
  • Clostridium saccharoperbutylacetonicum

    Clostridium saccharoperbutylacetonicum

    • Public DB hit
      GI:310975086
      NR_036950
    • Hit length
      1,380 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NR_036950
      1.45% cov
    • Alignment Length
      20 bp
  • [Clostridium] hathewayi

    [Clostridium] hathewayi

    • Public DB hit
      GI:310975064
      NR_036928
    • Hit length
      1,431 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NR_036928
      1.4% cov
    • Alignment Length
      20 bp
  • Tetragenococcus solitarius

    Tetragenococcus solitarius

    • Public DB hit
      GI:310975062
      NR_036926
    • Hit length
      1,554 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NR_036926
      1.29% cov
    • Alignment Length
      20 bp
  • Bradyrhizobium japonicum

    Bradyrhizobium japonicum

    • Public DB hit
      GI:310975001
      NR_036865
    • Hit length
      1,481 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NR_036865
      1.35% cov
    • Alignment Length
      20 bp
  • Caryophanon latum

    Caryophanon latum

    • Public DB hit
      GI:310974986
      NR_036850
    • Hit length
      1,489 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NR_036850
      1.34% cov
    • Alignment Length
      20 bp
  • Spiroplasma citri

    Spiroplasma citri

    • Public DB hit
      GI:310974985
      NR_036849
    • Hit length
      1,530 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NR_036849
      1.31% cov
    • Alignment Length
      20 bp
  • Clostridium botulinum

    Clostridium botulinum

    • Public DB hit
      GI:310974922
      NR_036786
    • Hit length
      1,507 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NR_036786
      1.33% cov
    • Alignment Length
      20 bp
  • Agrobacterium vitis

    Agrobacterium vitis

    • Public DB hit
      GI:310974916
      NR_036780
    • Hit length
      1,480 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NR_036780
      1.35% cov
    • Alignment Length
      20 bp
  • Rickettsia australis

    Rickettsia australis

    • Public DB hit
      GI:310974911
      NR_036773
    • Hit length
      1,415 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NR_036773
      1.41% cov
    • Alignment Length
      20 bp
  • Saccharomonospora halophila

    Saccharomonospora halophila

    • Public DB hit
      GI:315614512
      NR_025413
    • Hit length
      1,506 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NR_025413
      1.33% cov
    • Alignment Length
      20 bp
  • Borrelia sinica

    Borrelia sinica

    • Public DB hit
      GI:315614511
      NR_024713
    • Hit length
      1,502 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NR_024713
      1.33% cov
    • Alignment Length
      20 bp
  • Lactobacillus perolens

    Lactobacillus perolens

    • Public DB hit
      GI:265679052
      NR_029360
    • Hit length
      1,554 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NR_029360
      1.29% cov
    • Alignment Length
      20 bp
  • Hymenobacter roseosalivarius

    Hymenobacter roseosalivarius

    • Public DB hit
      GI:265679051
      NR_029359
    • Hit length
      1,496 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NR_029359
      1.34% cov
    • Alignment Length
      20 bp
Occurrence
20 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
4
Length
20
Type
DNA
Locations
Fulltext

Declared organism:
Artificial

Determined organism:
  • Shewanella hanedai

    Shewanella hanedai

    • Public DB hit
      GI:310975208
      NR_037072
    • Hit length
      1,414 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NR_037072
      1.41% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Burkholderia glathei

    Burkholderia glathei

    • Public DB hit
      GI:310975201
      NR_037065
    • Hit length
      1,578 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NR_037065
      1.27% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Propionibacterium freudenreichii subsp. shermanii

    Propionibacterium freudenreichii subsp. shermanii

    • Public DB hit
      GI:310975108
      NR_036972
    • Hit length
      1,510 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NR_036972
      1.32% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Bradyrhizobium elkanii

    Bradyrhizobium elkanii

    • Public DB hit
      GI:310975089
      NR_036953
    • Hit length
      1,480 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NR_036953
      1.35% cov
    • Alignment Length
      20 bp
  • Bradyrhizobium japonicum

    Bradyrhizobium japonicum

    • Public DB hit
      GI:310975001
      NR_036865
    • Hit length
      1,481 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NR_036865
      1.35% cov
    • Alignment Length
      20 bp
  • Chlamydia psittaci

    Chlamydia psittaci

    • Public DB hit
      GI:310975000
      NR_036864
    • Hit length
      1,553 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NR_036864
      1.29% cov
    • Alignment Length
      20 bp
  • Agrobacterium vitis

    Agrobacterium vitis

    • Public DB hit
      GI:310974916
      NR_036780
    • Hit length
      1,480 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NR_036780
      1.35% cov
    • Alignment Length
      20 bp
  • Rickettsia australis

    Rickettsia australis

    • Public DB hit
      GI:310974911
      NR_036773
    • Hit length
      1,415 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NR_036773
      1.41% cov
    • Alignment Length
      20 bp
  • Saccharomonospora halophila

    Saccharomonospora halophila

    • Public DB hit
      GI:315614512
      NR_025413
    • Hit length
      1,506 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NR_025413
      1.33% cov
    • Alignment Length
      20 bp
  • Pseudoalteromonas tunicata

    Pseudoalteromonas tunicata

    • Public DB hit
      GI:265679057
      NR_029365
    • Hit length
      1,331 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NR_029365
      1.5% cov
    • Alignment Length
      20 bp
  • Lactobacillus amylolyticus

    Lactobacillus amylolyticus

    • Public DB hit
      GI:265679044
      NR_029352
    • Hit length
      1,544 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NR_029352
      1.3% cov
    • Alignment Length
      20 bp
  • Vibrio pectenicida

    Vibrio pectenicida

    • Public DB hit
      GI:265679036
      NR_029344
    • Hit length
      1,470 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NR_029344
      1.36% cov
    • Alignment Length
      20 bp
  • Mycobacterium goodii

    Mycobacterium goodii

    • Public DB hit
      GI:265679033
      NR_029341
    • Hit length
      1,404 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NR_029341
      1.42% cov
    • Alignment Length
      20 bp
  • Alcanivorax borkumensis SK2

    Alcanivorax borkumensis SK2

    • Public DB hit
      GI:265679032
      NR_029340
    • Hit length
      1,494 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NR_029340
      1.34% cov
    • Alignment Length
      20 bp
  • Xanthomonas theicola

    Xanthomonas theicola

    • Public DB hit
      GI:265679024
      NR_029332
    • Hit length
      1,500 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NR_029332
      1.33% cov
    • Alignment Length
      20 bp
  • Rhizobium sullae

    Rhizobium sullae

    • Public DB hit
      GI:265679022
      NR_029330
    • Hit length
      1,362 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NR_029330
      1.47% cov
    • Alignment Length
      20 bp
  • Chlorobium phaeovibrioides

    Chlorobium phaeovibrioides

    • Public DB hit
      GI:265679014
      NR_029322
    • Hit length
      1,307 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NR_029322
      1.53% cov
    • Alignment Length
      20 bp
  • Chlorobaculum thiosulfatiphilum

    Chlorobaculum thiosulfatiphilum

    • Public DB hit
      GI:265679013
      NR_029321
    • Hit length
      1,388 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NR_029321
      1.44% cov
    • Alignment Length
      20 bp
  • Pseudomonas anguilliseptica

    Pseudomonas anguilliseptica

    • Public DB hit
      GI:265679011
      NR_029319
    • Hit length
      1,408 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NR_029319
      1.42% cov
    • Alignment Length
      20 bp
  • Mycobacterium conspicuum

    Mycobacterium conspicuum

    • Public DB hit
      GI:265678990
      NR_029298
    • Hit length
      1,396 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NR_029298
      1.43% cov
    • Alignment Length
      20 bp
  • Treponema maltophilum

    Treponema maltophilum

    • Public DB hit
      GI:265678988
      NR_029296
    • Hit length
      1,494 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NR_029296
      1.34% cov
    • Alignment Length
      20 bp
  • Syntrophus gentianae

    Syntrophus gentianae

    • Public DB hit
      GI:265678987
      NR_029295
    • Hit length
      1,548 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NR_029295
      1.29% cov
    • Alignment Length
      20 bp
  • Syntrophus buswellii

    Syntrophus buswellii

    • Public DB hit
      GI:265678986
      NR_029294
    • Hit length
      1,549 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NR_029294
      1.29% cov
    • Alignment Length
      20 bp
  • Mycobacterium vanbaalenii PYR-1

    Mycobacterium vanbaalenii PYR-1

    • Public DB hit
      GI:265678985
      NR_029293
    • Hit length
      1,491 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NR_029293
      1.34% cov
    • Alignment Length
      20 bp
  • Desulforhabdus amnigena

    Desulforhabdus amnigena

    • Public DB hit
      GI:265678981
      NR_029289
    • Hit length
      1,482 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NR_029289
      1.35% cov
    • Alignment Length
      20 bp
Occurrence
103 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
5
Length
20
Type
DNA
Locations
Fulltext

Declared organism:
Artificial

Determined organism:
  • Mycoplasma capricolum subsp. capripneumoniae

    Mycoplasma capricolum subsp. capripneumoniae

    • Public DB hit
      GI:310975197
      NR_037061
    • Hit length
      1,522 bp
    • E Value
      4.54E-1
    • BLAST Score
      37.4 bits
    • Similarity
      95%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NR_037061
      1.31% cov
    • Alignment Length
      20 bp
    • CIGAR string
      11MN8M mismatches: 1 - insertions: 0 - deletions: 0
  • Staphylococcus aureus subsp. aureus

    Staphylococcus aureus subsp. aureus

    • Public DB hit
      GI:310975143
      NR_037007
    • Hit length
      1,555 bp
    • E Value
      4.54E-1
    • BLAST Score
      37.4 bits
    • Similarity
      95%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NR_037007
      1.29% cov
    • Alignment Length
      20 bp
    • CIGAR string
      11MN8M mismatches: 1 - insertions: 0 - deletions: 0
  • Caryophanon latum

    Caryophanon latum

    • Public DB hit
      GI:310974986
      NR_036850
    • Hit length
      1,489 bp
    • E Value
      4.54E-1
    • BLAST Score
      37.4 bits
    • Similarity
      95%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NR_036850
      1.34% cov
    • Alignment Length
      20 bp
    • CIGAR string
      11MN8M mismatches: 1 - insertions: 0 - deletions: 0
  • Spiroplasma citri

    Spiroplasma citri

    • Public DB hit
      GI:310974985
      NR_036849
    • Hit length
      1,530 bp
    • E Value
      4.54E-1
    • BLAST Score
      37.4 bits
    • Similarity
      95%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NR_036849
      1.31% cov
    • Alignment Length
      20 bp
  • Clostridium botulinum

    Clostridium botulinum

    • Public DB hit
      GI:310974922
      NR_036786
    • Hit length
      1,507 bp
    • E Value
      4.54E-1
    • BLAST Score
      37.4 bits
    • Similarity
      95%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NR_036786
      1.33% cov
    • Alignment Length
      20 bp
  • Agrobacterium vitis

    Agrobacterium vitis

    • Public DB hit
      GI:310974916
      NR_036780
    • Hit length
      1,480 bp
    • E Value
      4.54E-1
    • BLAST Score
      37.4 bits
    • Similarity
      95%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NR_036780
      1.35% cov
    • Alignment Length
      20 bp
  • Rhodothermus marinus

    Rhodothermus marinus

    • Public DB hit
      GI:265678974
      NR_029282
    • Hit length
      1,543 bp
    • E Value
      4.54E-1
    • BLAST Score
      37.4 bits
    • Similarity
      95%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NR_029282
      1.3% cov
    • Alignment Length
      20 bp
  • [Clostridium] rectum

    [Clostridium] rectum

    • Public DB hit
      GI:265678963
      NR_029271
    • Hit length
      1,505 bp
    • E Value
      4.54E-1
    • BLAST Score
      37.4 bits
    • Similarity
      95%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NR_029271
      1.33% cov
    • Alignment Length
      20 bp
  • [Clostridium] litorale

    [Clostridium] litorale

    • Public DB hit
      GI:265678962
      NR_029270
    • Hit length
      1,501 bp
    • E Value
      4.54E-1
    • BLAST Score
      37.4 bits
    • Similarity
      95%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NR_029270
      1.33% cov
    • Alignment Length
      20 bp
  • Oxobacter pfennigii

    Oxobacter pfennigii

    • Public DB hit
      GI:265678960
      NR_029268
    • Hit length
      1,490 bp
    • E Value
      4.54E-1
    • BLAST Score
      37.4 bits
    • Similarity
      95%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NR_029268
      1.34% cov
    • Alignment Length
      20 bp
  • Clostridium tetani

    Clostridium tetani

    • Public DB hit
      GI:265678952
      NR_029260
    • Hit length
      1,508 bp
    • E Value
      4.54E-1
    • BLAST Score
      37.4 bits
    • Similarity
      95%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NR_029260
      1.33% cov
    • Alignment Length
      20 bp
  • Vibrio metschnikovii

    Vibrio metschnikovii

    • Public DB hit
      GI:265678950
      NR_029258
    • Hit length
      1,433 bp
    • E Value
      4.54E-1
    • BLAST Score
      37.4 bits
    • Similarity
      95%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NR_029258
      1.4% cov
    • Alignment Length
      20 bp
  • Clostridium proteolyticum

    Clostridium proteolyticum

    • Public DB hit
      GI:265678942
      NR_029250
    • Hit length
      1,500 bp
    • E Value
      4.54E-1
    • BLAST Score
      37.4 bits
    • Similarity
      95%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NR_029250
      1.33% cov
    • Alignment Length
      20 bp
  • Asaccharospora irregularis

    Asaccharospora irregularis

    • Public DB hit
      GI:265678941
      NR_029249
    • Hit length
      1,489 bp
    • E Value
      4.54E-1
    • BLAST Score
      37.4 bits
    • Similarity
      95%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NR_029249
      1.34% cov
    • Alignment Length
      20 bp
  • Erysipelatoclostridium ramosum

    Erysipelatoclostridium ramosum

    • Public DB hit
      GI:265678939
      NR_029247
    • Hit length
      1,519 bp
    • E Value
      4.54E-1
    • BLAST Score
      37.4 bits
    • Similarity
      95%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NR_029247
      1.32% cov
    • Alignment Length
      20 bp
  • Clostridium collagenovorans

    Clostridium collagenovorans

    • Public DB hit
      GI:265678938
      NR_029246
    • Hit length
      1,500 bp
    • E Value
      4.54E-1
    • BLAST Score
      37.4 bits
    • Similarity
      95%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NR_029246
      1.33% cov
    • Alignment Length
      20 bp
  • Methylomonas aurantiaca

    Methylomonas aurantiaca

    • Public DB hit
      GI:265678935
      NR_029243
    • Hit length
      1,466 bp
    • E Value
      4.54E-1
    • BLAST Score
      37.4 bits
    • Similarity
      95%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NR_029243
      1.36% cov
    • Alignment Length
      20 bp
  • Methylomicrobium agile

    Methylomicrobium agile

    • Public DB hit
      GI:265678932
      NR_029240
    • Hit length
      1,462 bp
    • E Value
      4.54E-1
    • BLAST Score
      37.4 bits
    • Similarity
      95%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NR_029240
      1.37% cov
    • Alignment Length
      20 bp
  • Clostridium argentinense

    Clostridium argentinense

    • Public DB hit
      GI:265678924
      NR_029232
    • Hit length
      1,504 bp
    • E Value
      4.54E-1
    • BLAST Score
      37.4 bits
    • Similarity
      95%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NR_029232
      1.33% cov
    • Alignment Length
      20 bp
  • Clostridium sporogenes

    Clostridium sporogenes

    • Public DB hit
      GI:265678923
      NR_029231
    • Hit length
      1,503 bp
    • E Value
      4.54E-1
    • BLAST Score
      37.4 bits
    • Similarity
      95%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NR_029231
      1.33% cov
    • Alignment Length
      20 bp
  • Clostridium beijerinckii

    Clostridium beijerinckii

    • Public DB hit
      GI:265678922
      NR_029230
    • Hit length
      1,503 bp
    • E Value
      4.54E-1
    • BLAST Score
      37.4 bits
    • Similarity
      95%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NR_029230
      1.33% cov
    • Alignment Length
      20 bp
  • Clostridium baratii

    Clostridium baratii

    • Public DB hit
      GI:265678921
      NR_029229
    • Hit length
      1,508 bp
    • E Value
      4.54E-1
    • BLAST Score
      37.4 bits
    • Similarity
      95%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NR_029229
      1.33% cov
    • Alignment Length
      20 bp
  • Marinomonas vaga

    Marinomonas vaga

    • Public DB hit
      GI:265678920
      NR_029228
    • Hit length
      1,466 bp
    • E Value
      4.54E-1
    • BLAST Score
      37.4 bits
    • Similarity
      95%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NR_029228
      1.36% cov
    • Alignment Length
      20 bp
  • Halomonas elongata

    Halomonas elongata

    • Public DB hit
      GI:265678919
      NR_029227
    • Hit length
      1,468 bp
    • E Value
      4.54E-1
    • BLAST Score
      37.4 bits
    • Similarity
      95%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NR_029227
      1.36% cov
    • Alignment Length
      20 bp
  • Propionigenium modestum

    Propionigenium modestum

    • Public DB hit
      GI:265678908
      NR_029216
    • Hit length
      1,515 bp
    • E Value
      4.54E-1
    • BLAST Score
      37.4 bits
    • Similarity
      95%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NR_029216
      1.32% cov
    • Alignment Length
      20 bp
Occurrence
1349 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
6
Length
23
Type
DNA
Locations
Fulltext

Declared organism:
Artificial

Occurrence
7 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
7
Length
24
Type
DNA
Locations
Fulltext

Declared organism:
Artificial

Occurrence
7 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
8
Length
18
Type
DNA
Locations
Fulltext

Declared organism:
Artificial

Determined organism:
  • Bifidobacterium pseudocatenulatum

    Bifidobacterium pseudocatenulatum

    • Public DB hit
      GI:310975253
      NR_037117
    • Hit length
      1,513 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NR_037117
      1.19% cov
    • Alignment Length
      18 bp
    • CIGAR string
      18M mismatches: 0 - insertions: 0 - deletions: 0
  • Shewanella hanedai

    Shewanella hanedai

    • Public DB hit
      GI:310975208
      NR_037072
    • Hit length
      1,414 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NR_037072
      1.27% cov
    • Alignment Length
      18 bp
    • CIGAR string
      18M mismatches: 0 - insertions: 0 - deletions: 0
  • Corynebacterium pseudotuberculosis

    Corynebacterium pseudotuberculosis

    • Public DB hit
      GI:310975206
      NR_037070
    • Hit length
      1,396 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NR_037070
      1.29% cov
    • Alignment Length
      18 bp
    • CIGAR string
      18M mismatches: 0 - insertions: 0 - deletions: 0
  • [Clostridium] xylanolyticum

    [Clostridium] xylanolyticum

    • Public DB hit
      GI:310975204
      NR_037068
    • Hit length
      1,441 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NR_037068
      1.25% cov
    • Alignment Length
      18 bp
  • Burkholderia glathei

    Burkholderia glathei

    • Public DB hit
      GI:310975201
      NR_037065
    • Hit length
      1,578 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NR_037065
      1.14% cov
    • Alignment Length
      18 bp
  • Mycoplasma capricolum subsp. capripneumoniae

    Mycoplasma capricolum subsp. capripneumoniae

    • Public DB hit
      GI:310975197
      NR_037061
    • Hit length
      1,522 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NR_037061
      1.18% cov
    • Alignment Length
      18 bp
  • Tissierella creatinophila

    Tissierella creatinophila

    • Public DB hit
      GI:310975164
      NR_037028
    • Hit length
      1,332 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NR_037028
      1.35% cov
    • Alignment Length
      18 bp
  • Staphylococcus schleiferi subsp. schleiferi

    Staphylococcus schleiferi subsp. schleiferi

    • Public DB hit
      GI:310975145
      NR_037009
    • Hit length
      1,527 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NR_037009
      1.18% cov
    • Alignment Length
      18 bp
  • Staphylococcus aureus subsp. aureus

    Staphylococcus aureus subsp. aureus

    • Public DB hit
      GI:310975143
      NR_037007
    • Hit length
      1,555 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NR_037007
      1.16% cov
    • Alignment Length
      18 bp
  • Lactobacillus diolivorans

    Lactobacillus diolivorans

    • Public DB hit
      GI:310975140
      NR_037004
    • Hit length
      1,401 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NR_037004
      1.28% cov
    • Alignment Length
      18 bp
  • Bradyrhizobium elkanii

    Bradyrhizobium elkanii

    • Public DB hit
      GI:310975089
      NR_036953
    • Hit length
      1,480 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NR_036953
      1.22% cov
    • Alignment Length
      18 bp
  • Clostridium saccharobutylicum

    Clostridium saccharobutylicum

    • Public DB hit
      GI:310975087
      NR_036951
    • Hit length
      1,381 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NR_036951
      1.3% cov
    • Alignment Length
      18 bp
  • Clostridium saccharoperbutylacetonicum

    Clostridium saccharoperbutylacetonicum

    • Public DB hit
      GI:310975086
      NR_036950
    • Hit length
      1,380 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NR_036950
      1.3% cov
    • Alignment Length
      18 bp
  • [Clostridium] hathewayi

    [Clostridium] hathewayi

    • Public DB hit
      GI:310975064
      NR_036928
    • Hit length
      1,431 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NR_036928
      1.26% cov
    • Alignment Length
      18 bp
  • Tetragenococcus solitarius

    Tetragenococcus solitarius

    • Public DB hit
      GI:310975062
      NR_036926
    • Hit length
      1,554 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NR_036926
      1.16% cov
    • Alignment Length
      18 bp
  • Bradyrhizobium japonicum

    Bradyrhizobium japonicum

    • Public DB hit
      GI:310975001
      NR_036865
    • Hit length
      1,481 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NR_036865
      1.22% cov
    • Alignment Length
      18 bp
  • Bifidobacterium angulatum

    Bifidobacterium angulatum

    • Public DB hit
      GI:310974989
      NR_036853
    • Hit length
      1,514 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NR_036853
      1.19% cov
    • Alignment Length
      18 bp
  • Caryophanon latum

    Caryophanon latum

    • Public DB hit
      GI:310974986
      NR_036850
    • Hit length
      1,489 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NR_036850
      1.21% cov
    • Alignment Length
      18 bp
  • Spiroplasma citri

    Spiroplasma citri

    • Public DB hit
      GI:310974985
      NR_036849
    • Hit length
      1,530 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NR_036849
      1.18% cov
    • Alignment Length
      18 bp
  • Clostridium botulinum

    Clostridium botulinum

    • Public DB hit
      GI:310974922
      NR_036786
    • Hit length
      1,507 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NR_036786
      1.19% cov
    • Alignment Length
      18 bp
  • Agrobacterium vitis

    Agrobacterium vitis

    • Public DB hit
      GI:310974916
      NR_036780
    • Hit length
      1,480 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NR_036780
      1.22% cov
    • Alignment Length
      18 bp
  • Saccharomonospora halophila

    Saccharomonospora halophila

    • Public DB hit
      GI:315614512
      NR_025413
    • Hit length
      1,506 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NR_025413
      1.2% cov
    • Alignment Length
      18 bp
  • Borrelia sinica

    Borrelia sinica

    • Public DB hit
      GI:315614511
      NR_024713
    • Hit length
      1,502 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NR_024713
      1.2% cov
    • Alignment Length
      18 bp
  • Pseudoalteromonas tunicata

    Pseudoalteromonas tunicata

    • Public DB hit
      GI:265679057
      NR_029365
    • Hit length
      1,331 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NR_029365
      1.35% cov
    • Alignment Length
      18 bp
  • Lactobacillus perolens

    Lactobacillus perolens

    • Public DB hit
      GI:265679052
      NR_029360
    • Hit length
      1,554 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NR_029360
      1.16% cov
    • Alignment Length
      18 bp
Occurrence
180 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
9
Length
19
Type
DNA
Locations
Fulltext

Declared organism:
Artificial

Occurrence
26 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
10
Length
20
Type
DNA
Locations
Fulltext

Declared organism:
Artificial

Occurrence
7 times in PatSeqDB
Tools
PatSeq Finder

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