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Search for Biological Sequences disclosed in Patents

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Data obtained from: DDBJ Pat NCBI GenBank USPTO Fulltext EMBL-EBI Pat
12 sequences found in this patent (in total)

Displaying 1 - 10 of 12 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
21
Type
peptide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
Occurrence
2 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
21
Type
peptide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
Occurrence
2 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
3
Length
19
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Drosophila simulans

    Drosophila simulans

    • Public DB hit
      GI:195574275
      XM_002105079
      1 of 2 hits reported for Drosophila simulans.
    • Hit length
      1,026 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      94.74%
    • Alignment (schematic)

      SEQ ID NO 3
      94.74% cov
      XM_002105079
      1.75% cov
    • Alignment Length
      18 bp
    • CIGAR string
      18M1H mismatches: 0 - insertions: 0 - deletions: 0
  • Ralstonia solanacearum IPO1609

    Ralstonia solanacearum IPO1609

    • Public DB hit
      GI:206591779
      CU914166
    • Hit length
      1,870,194 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      94.74%
    • Alignment (schematic)

      SEQ ID NO 3
      94.74% cov
      CU914166
      0% cov
    • Alignment Length
      18 bp
    • CIGAR string
      1H18M mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
2 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
4
Length
21
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Delftia sp. Cs1-4

    Delftia sp. Cs1-4

    • Public DB hit
      GI:333741867
      CP002735
    • Hit length
      6,685,842 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      CP002735
      0% cov
    • Alignment Length
      21 bp
    • CIGAR string
      21M mismatches: 0 - insertions: 0 - deletions: 0
  • Ralstonia solanacearum CMR15

    Ralstonia solanacearum CMR15

    • Public DB hit
      GI:299068436
      FP885896
    • Hit length
      1,959,334 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      FP885896
      0% cov
    • Alignment Length
      21 bp
    • CIGAR string
      21M mismatches: 0 - insertions: 0 - deletions: 0
  • Geodermatophilus obscurus DSM 43160

    Geodermatophilus obscurus DSM 43160

    • Public DB hit
      GI:284061874
      CP001867
    • Hit length
      5,322,497 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      CP001867
      0% cov
    • Alignment Length
      21 bp
    • CIGAR string
      21M mismatches: 0 - insertions: 0 - deletions: 0
  • uncultured bacterium L11E10

    uncultured bacterium L11E10

    • Public DB hit
      GI:253826188
      GQ231434
    • Hit length
      31,851 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      GQ231434
      0.07% cov
    • Alignment Length
      21 bp
  • Laribacter hongkongensis HLHK9

    Laribacter hongkongensis HLHK9

    • Public DB hit
      GI:226713858
      CP001154
    • Hit length
      3,169,329 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      CP001154
      0% cov
    • Alignment Length
      21 bp
  • Acidovorax ebreus TPSY

    Acidovorax ebreus TPSY

    • Public DB hit
      GI:221728669
      CP001392
    • Hit length
      3,796,573 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      CP001392
      0% cov
    • Alignment Length
      21 bp
  • Pseudomonas aeruginosa LESB58

    Pseudomonas aeruginosa LESB58

    • Public DB hit
      GI:218768969
      FM209186
    • Hit length
      6,601,757 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      FM209186
      0% cov
    • Alignment Length
      21 bp
  • Delftia acidovorans SPH-1

    Delftia acidovorans SPH-1

    • Public DB hit
      GI:160361034
      CP000884
    • Hit length
      6,767,514 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      CP000884
      0% cov
    • Alignment Length
      21 bp
  • Pseudomonas aeruginosa PA7

    Pseudomonas aeruginosa PA7

    • Public DB hit
      GI:150958624
      CP000744
    • Hit length
      6,588,339 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      CP000744
      0% cov
    • Alignment Length
      21 bp
  • Burkholderia mallei NCTC 10247

    Burkholderia mallei NCTC 10247

    • Public DB hit
      GI:126238441
      CP000547
    • Hit length
      2,352,693 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      CP000547
      0% cov
    • Alignment Length
      21 bp
  • Burkholderia pseudomallei 1106a

    Burkholderia pseudomallei 1106a

    • Public DB hit
      GI:126229231
      CP000573
    • Hit length
      3,100,794 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      CP000573
      0% cov
    • Alignment Length
      21 bp
  • Burkholderia pseudomallei 668

    Burkholderia pseudomallei 668

    • Public DB hit
      GI:126221798
      CP000571
    • Hit length
      3,127,456 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      CP000571
      0% cov
    • Alignment Length
      21 bp
  • Burkholderia mallei NCTC 10229

    Burkholderia mallei NCTC 10229

    • Public DB hit
      GI:124289161
      CP000545
    • Hit length
      2,284,095 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      CP000545
      0% cov
    • Alignment Length
      21 bp
  • Burkholderia mallei SAVP1

    Burkholderia mallei SAVP1

    • Public DB hit
      GI:121224242
      CP000525
    • Hit length
      1,734,922 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      CP000525
      0% cov
    • Alignment Length
      21 bp
  • Acidovorax sp. JS42

    Acidovorax sp. JS42

    • Public DB hit
      GI:120604516
      CP000539
    • Hit length
      4,448,856 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      CP000539
      0% cov
    • Alignment Length
      21 bp
  • Pseudomonas aeruginosa UCBPP-PA14

    Pseudomonas aeruginosa UCBPP-PA14

    • Public DB hit
      GI:115583796
      CP000438
    • Hit length
      6,537,648 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      CP000438
      0% cov
    • Alignment Length
      21 bp
  • Pseudomonas aeruginosa PAO1

    Pseudomonas aeruginosa PAO1

    • Public DB hit
      GI:110227054
      AE004091
    • Hit length
      6,264,404 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      AE004091
      0% cov
    • Alignment Length
      21 bp
  • Pseudomonas entomophila L48

    Pseudomonas entomophila L48

    • Public DB hit
      GI:95101722
      CT573326
    • Hit length
      5,888,780 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      CT573326
      0% cov
    • Alignment Length
      21 bp
  • Burkholderia pseudomallei 1710b

    Burkholderia pseudomallei 1710b

    • Public DB hit
      GI:76581710
      CP000125
    • Hit length
      3,181,762 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      CP000125
      0% cov
    • Alignment Length
      21 bp
  • Burkholderia mallei ATCC 23344

    Burkholderia mallei ATCC 23344

    • Public DB hit
      GI:66967517
      CP000011
    • Hit length
      2,325,379 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      CP000011
      0% cov
    • Alignment Length
      21 bp
  • Burkholderia pseudomallei K96243

    Burkholderia pseudomallei K96243

    • Public DB hit
      GI:52211453
      BX571966
    • Hit length
      3,173,005 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      BX571966
      0% cov
    • Alignment Length
      21 bp
  • Pseudomonas syringae pv. tomato str. DC3000

    Pseudomonas syringae pv. tomato str. DC3000

    • Public DB hit
      GI:28856110
      AE016853
    • Hit length
      6,397,126 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      AE016853
      0% cov
    • Alignment Length
      21 bp
  • Pseudomonas mendocina NK-01

    Pseudomonas mendocina NK-01

    • Public DB hit
      GI:328915200
      CP002620
    • Hit length
      5,434,353 bp
    • E Value
      1.01E-1
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      95.24%
    • Alignment (schematic)

      SEQ ID NO 4
      95.24% cov
      CP002620
      0% cov
    • Alignment Length
      20 bp
  • Pseudomonas brassicacearum subsp. brassicacearum NFM421

    Pseudomonas brassicacearum subsp. brassicacearum NFM421

    • Public DB hit
      GI:327374765
      CP002585
    • Hit length
      6,843,248 bp
    • E Value
      1.01E-1
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      95.24%
    • Alignment (schematic)

      SEQ ID NO 4
      95.24% cov
      CP002585
      0% cov
    • Alignment Length
      20 bp
  • Pseudomonas putida BIRD-1

    Pseudomonas putida BIRD-1

    • Public DB hit
      GI:313496345
      CP002290
    • Hit length
      5,731,541 bp
    • E Value
      1.01E-1
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      95.24%
    • Alignment (schematic)

      SEQ ID NO 4
      95.24% cov
      CP002290
      0% cov
    • Alignment Length
      20 bp
Occurrence
2 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
5
Length
2,607
Type
nucleotide
Locations
Drawings

Declared organism:
Pseudomonas aeruginosa 2192

Determined organism:
  • Pseudomonas aeruginosa PAO1

    Pseudomonas aeruginosa PAO1

    • Public DB hit
      GI:110227054
      AE004091
    • Hit length
      6,264,404 bp
    • E Value
      0E0
    • BLAST Score
      4,815.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      AE004091
      0.04% cov
    • Alignment Length
      2,607 bp
    • CIGAR string
      2607M mismatches: 0 - insertions: 0 - deletions: 0
  • Pseudomonas aeruginosa LESB58

    Pseudomonas aeruginosa LESB58

    • Public DB hit
      GI:218768969
      FM209186
    • Hit length
      6,601,757 bp
    • E Value
      0E0
    • BLAST Score
      4,771 bits
    • Similarity
      99.69%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      FM209186
      0.04% cov
    • Alignment Length
      2,607 bp
    • CIGAR string
      902MN574MN354MN137MN5MN80MN209MN119MN219M mismatches: 8 - insertions: 0 - deletions: 0
  • Pseudomonas aeruginosa UCBPP-PA14

    Pseudomonas aeruginosa UCBPP-PA14

    • Public DB hit
      GI:115583796
      CP000438
    • Hit length
      6,537,648 bp
    • E Value
      0E0
    • BLAST Score
      4,765.5 bits
    • Similarity
      99.65%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      CP000438
      0.04% cov
    • Alignment Length
      2,607 bp
    • CIGAR string
      143MN758MN533MN40MN234MN257MN5MN5MN398MN225M mismatches: 9 - insertions: 0 - deletions: 0
  • Pseudomonas aeruginosa PA7

    Pseudomonas aeruginosa PA7

    • Public DB hit
      GI:150958624
      CP000744
    • Hit length
      6,588,339 bp
    • E Value
      0E0
    • BLAST Score
      4,687.9 bits
    • Similarity
      99.12%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      CP000744
      0.04% cov
    • Alignment Length
      2,607 bp
  • Pseudomonas entomophila L48

    Pseudomonas entomophila L48

    • Public DB hit
      GI:95101722
      CT573326
    • Hit length
      5,888,780 bp
    • E Value
      0E0
    • BLAST Score
      2,737.9 bits
    • Similarity
      86.06%
    • Coverage
      99.16%
    • Alignment (schematic)

      SEQ ID NO 5
      99.16% cov
      CT573326
      0.04% cov
    • Alignment Length
      2,619 bp
  • Achromobacter xylosoxidans A8

    Achromobacter xylosoxidans A8

    • Public DB hit
      GI:310757913
      CP002287
    • Hit length
      7,013,095 bp
    • E Value
      0E0
    • BLAST Score
      2,675.1 bits
    • Similarity
      85.65%
    • Coverage
      99.39%
    • Alignment (schematic)

      SEQ ID NO 5
      99.39% cov
      CP002287
      0.04% cov
    • Alignment Length
      2,641 bp
  • Pseudoxanthomonas suwonensis 11-1

    Pseudoxanthomonas suwonensis 11-1

    • Public DB hit
      GI:317464132
      CP002446
    • Hit length
      3,419,049 bp
    • E Value
      0E0
    • BLAST Score
      2,656.6 bits
    • Similarity
      85.51%
    • Coverage
      99.08%
    • Alignment (schematic)

      SEQ ID NO 5
      99.08% cov
      CP002446
      0.08% cov
    • Alignment Length
      2,643 bp
  • Cupriavidus taiwanensis LMG 19424

    Cupriavidus taiwanensis LMG 19424

    • Public DB hit
      GI:170937689
      CU633749
    • Hit length
      3,416,911 bp
    • E Value
      0E0
    • BLAST Score
      2,632.6 bits
    • Similarity
      85.33%
    • Coverage
      99.08%
    • Alignment (schematic)

      SEQ ID NO 5
      99.08% cov
      CU633749
      0.08% cov
    • Alignment Length
      2,632 bp
  • Ralstonia solanacearum CMR15

    Ralstonia solanacearum CMR15

    • Public DB hit
      GI:299068436
      FP885896
    • Hit length
      1,959,334 bp
    • E Value
      0E0
    • BLAST Score
      2,623.4 bits
    • Similarity
      85.23%
    • Coverage
      99.65%
    • Alignment (schematic)

      SEQ ID NO 5
      99.65% cov
      FP885896
      0.13% cov
    • Alignment Length
      2,640 bp
  • Ralstonia eutropha H16

    Ralstonia eutropha H16

    • Public DB hit
      GI:113524807
      AM260479
    • Hit length
      4,052,032 bp
    • E Value
      0E0
    • BLAST Score
      2,604.9 bits
    • Similarity
      85.16%
    • Coverage
      99.08%
    • Alignment (schematic)

      SEQ ID NO 5
      99.08% cov
      AM260479
      0.06% cov
    • Alignment Length
      2,635 bp
  • Pseudomonas putida KT2440

    Pseudomonas putida KT2440

    • Public DB hit
      GI:24987239
      AE015451
    • Hit length
      6,181,863 bp
    • E Value
      0E0
    • BLAST Score
      2,592 bits
    • Similarity
      84.98%
    • Coverage
      99.69%
    • Alignment (schematic)

      SEQ ID NO 5
      99.69% cov
      AE015451
      0.04% cov
    • Alignment Length
      2,636 bp
  • Pseudomonas putida BIRD-1

    Pseudomonas putida BIRD-1

    • Public DB hit
      GI:313496345
      CP002290
    • Hit length
      5,731,541 bp
    • E Value
      0E0
    • BLAST Score
      2,586.4 bits
    • Similarity
      84.93%
    • Coverage
      99.69%
    • Alignment (schematic)

      SEQ ID NO 5
      99.69% cov
      CP002290
      0.05% cov
    • Alignment Length
      2,635 bp
  • Cupriavidus necator

    Cupriavidus necator

    • Public DB hit
      GI:16445328
      AF325554
    • Hit length
      10,526 bp
    • E Value
      0E0
    • BLAST Score
      2,584.6 bits
    • Similarity
      85.05%
    • Coverage
      99.08%
    • Alignment (schematic)

      SEQ ID NO 5
      99.08% cov
      AF325554
      24.51% cov
    • Alignment Length
      2,635 bp
  • Ralstonia eutropha JMP134

    Ralstonia eutropha JMP134

    • Public DB hit
      GI:72117119
      CP000090
    • Hit length
      3,806,533 bp
    • E Value
      0E0
    • BLAST Score
      2,575.3 bits
    • Similarity
      84.89%
    • Coverage
      99.27%
    • Alignment (schematic)

      SEQ ID NO 5
      99.27% cov
      CP000090
      0.07% cov
    • Alignment Length
      2,634 bp
  • Azotobacter vinelandii DJ

    Azotobacter vinelandii DJ

    • Public DB hit
      GI:226717097
      CP001157
    • Hit length
      5,365,318 bp
    • E Value
      0E0
    • BLAST Score
      2,566.1 bits
    • Similarity
      85.17%
    • Coverage
      97.78%
    • Alignment (schematic)

      SEQ ID NO 5
      97.78% cov
      CP001157
      0.05% cov
    • Alignment Length
      2,610 bp
  • Stenotrophomonas maltophilia K279a

    Stenotrophomonas maltophilia K279a

    • Public DB hit
      GI:190010013
      AM743169
    • Hit length
      4,851,126 bp
    • E Value
      0E0
    • BLAST Score
      2,540.3 bits
    • Similarity
      84.7%
    • Coverage
      99.04%
    • Alignment (schematic)

      SEQ ID NO 5
      99.04% cov
      AM743169
      0.05% cov
    • Alignment Length
      2,640 bp
  • Pseudomonas protegens Pf-5

    Pseudomonas protegens Pf-5

    • Public DB hit
      GI:68342549
      CP000076
    • Hit length
      7,074,893 bp
    • E Value
      0E0
    • BLAST Score
      2,538.4 bits
    • Similarity
      84.8%
    • Coverage
      98.81%
    • Alignment (schematic)

      SEQ ID NO 5
      98.81% cov
      CP000076
      0.04% cov
    • Alignment Length
      2,619 bp
  • Ralstonia solanacearum GMI1000

    Ralstonia solanacearum GMI1000

    • Public DB hit
      GI:30407128
      AL646053
    • Hit length
      2,094,509 bp
    • E Value
      0E0
    • BLAST Score
      2,527.3 bits
    • Similarity
      84.64%
    • Coverage
      99.27%
    • Alignment (schematic)

      SEQ ID NO 5
      99.27% cov
      AL646053
      0.12% cov
    • Alignment Length
      2,631 bp
  • Ralstonia solanacearum IPO1609

    Ralstonia solanacearum IPO1609

    • Public DB hit
      GI:206591779
      CU914166
    • Hit length
      1,870,194 bp
    • E Value
      0E0
    • BLAST Score
      2,518.1 bits
    • Similarity
      84.54%
    • Coverage
      99.65%
    • Alignment (schematic)

      SEQ ID NO 5
      99.65% cov
      CU914166
      0.14% cov
    • Alignment Length
      2,645 bp
  • Ralstonia solanacearum MolK2

    Ralstonia solanacearum MolK2

    • Public DB hit
      GI:206587397
      CU694393
    • Hit length
      646,408 bp
    • E Value
      0E0
    • BLAST Score
      2,518.1 bits
    • Similarity
      84.54%
    • Coverage
      99.65%
    • Alignment (schematic)

      SEQ ID NO 5
      99.65% cov
      CU694393
      0.4% cov
    • Alignment Length
      2,646 bp
  • Ralstonia solanacearum PSI07

    Ralstonia solanacearum PSI07

    • Public DB hit
      GI:299075079
      FP885891
    • Hit length
      2,085,000 bp
    • E Value
      0E0
    • BLAST Score
      2,507 bits
    • Similarity
      84.46%
    • Coverage
      99.65%
    • Alignment (schematic)

      SEQ ID NO 5
      99.65% cov
      FP885891
      0.12% cov
    • Alignment Length
      2,645 bp
  • Stenotrophomonas maltophilia R551-3

    Stenotrophomonas maltophilia R551-3

    • Public DB hit
      GI:194346582
      CP001111
    • Hit length
      4,573,969 bp
    • E Value
      0E0
    • BLAST Score
      2,501.5 bits
    • Similarity
      84.4%
    • Coverage
      99.04%
    • Alignment (schematic)

      SEQ ID NO 5
      99.04% cov
      CP001111
      0.06% cov
    • Alignment Length
      2,635 bp
  • Pseudomonas putida GB-1

    Pseudomonas putida GB-1

    • Public DB hit
      GI:166857509
      CP000926
    • Hit length
      6,078,430 bp
    • E Value
      0E0
    • BLAST Score
      2,492.3 bits
    • Similarity
      84.33%
    • Coverage
      99.69%
    • Alignment (schematic)

      SEQ ID NO 5
      99.69% cov
      CP000926
      0.04% cov
    • Alignment Length
      2,642 bp
  • Ralstonia solanacearum Po82

    Ralstonia solanacearum Po82

    • Public DB hit
      GI:334197458
      CP002820
    • Hit length
      1,949,172 bp
    • E Value
      0E0
    • BLAST Score
      2,484.9 bits
    • Similarity
      84.31%
    • Coverage
      99.65%
    • Alignment (schematic)

      SEQ ID NO 5
      99.65% cov
      CP002820
      0.13% cov
    • Alignment Length
      2,657 bp
  • Ralstonia solanacearum CFBP2957

    Ralstonia solanacearum CFBP2957

    • Public DB hit
      GI:299073288
      FP885907
    • Hit length
      2,163,376 bp
    • E Value
      0E0
    • BLAST Score
      2,484.9 bits
    • Similarity
      84.31%
    • Coverage
      99.65%
    • Alignment (schematic)

      SEQ ID NO 5
      99.65% cov
      FP885907
      0.12% cov
    • Alignment Length
      2,645 bp
Occurrence
2 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
6
Length
868
Type
peptide
Locations
Claims, Drawings

Declared organism:
Pseudomonas aeruginosa 2192

Determined organism:
  • Pseudomonas aeruginosa PAO1

    Pseudomonas aeruginosa PAO1

    • Public DB hit
      GI:15595991
      NP_249485
    • Hit length
      868 aa
    • E Value
      0E0
    • BLAST Score
      1,770 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NP_249485
      100% cov
    • Alignment Length
      868 aa
    • CIGAR string
      868M mismatches: 0 - insertions: 0 - deletions: 0
  • Pseudomonas aeruginosa UCBPP-PA14

    Pseudomonas aeruginosa UCBPP-PA14

    • Public DB hit
      GI:116048712
      YP_792488
    • Hit length
      868 aa
    • E Value
      0E0
    • BLAST Score
      1,768.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      YP_792488
      100% cov
    • Alignment Length
      868 aa
    • CIGAR string
      492MN375M mismatches: 1 - insertions: 0 - deletions: 0
  • Pseudomonas aeruginosa PACS2

    Pseudomonas aeruginosa PACS2

    • Public DB hit
      GI:107100256
      ZP_01364174
      1 of 2 hits reported for Pseudomonas aeruginosa PACS2.
    • Hit length
      868 aa
    • E Value
      0E0
    • BLAST Score
      1,765.7 bits
    • Similarity
      99.88%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      ZP_01364174
      100% cov
    • Alignment Length
      868 aa
    • CIGAR string
      329MN162MN375M mismatches: 2 - insertions: 0 - deletions: 0
  • Pseudomonas aeruginosa C3719

    Pseudomonas aeruginosa C3719

    • Public DB hit
      GI:254239152
      ZP_04932475
      1 of 2 hits reported for Pseudomonas aeruginosa C3719.
    • Hit length
      868 aa
    • E Value
      0E0
    • BLAST Score
      1,765.7 bits
    • Similarity
      99.88%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      ZP_04932475
      100% cov
    • Alignment Length
      868 aa
  • Pseudomonas aeruginosa HB13

    Pseudomonas aeruginosa HB13

    • Public DB hit
      GI:334838520
      EGM17237
    • Hit length
      868 aa
    • E Value
      0E0
    • BLAST Score
      1,765.7 bits
    • Similarity
      99.88%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      EGM17237
      100% cov
    • Alignment Length
      868 aa
  • Pseudomonas aeruginosa PA7

    Pseudomonas aeruginosa PA7

    • Public DB hit
      GI:152987844
      YP_001350066
    • Hit length
      868 aa
    • E Value
      0E0
    • BLAST Score
      1,762.3 bits
    • Similarity
      99.77%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      YP_001350066
      100% cov
    • Alignment Length
      868 aa
  • Pseudomonas entomophila L48

    Pseudomonas entomophila L48

    • Public DB hit
      GI:104781049
      YP_607547
    • Hit length
      862 aa
    • E Value
      0E0
    • BLAST Score
      1,557 bits
    • Similarity
      92.6%
    • Coverage
      99.65%
    • Alignment (schematic)

      SEQ ID NO 6
      99.65% cov
      YP_607547
      99.77% cov
    • Alignment Length
      865 aa
  • Pseudomonas putida BIRD-1

    Pseudomonas putida BIRD-1

    • Public DB hit
      GI:313499580
      ADR60946
    • Hit length
      863 aa
    • E Value
      0E0
    • BLAST Score
      1,551.6 bits
    • Similarity
      92.72%
    • Coverage
      99.65%
    • Alignment (schematic)

      SEQ ID NO 6
      99.65% cov
      ADR60946
      99.65% cov
    • Alignment Length
      865 aa
  • Pseudomonas putida F1

    Pseudomonas putida F1

    • Public DB hit
      GI:148548642
      YP_001268744
    • Hit length
      863 aa
    • E Value
      0E0
    • BLAST Score
      1,548.1 bits
    • Similarity
      92.6%
    • Coverage
      99.65%
    • Alignment (schematic)

      SEQ ID NO 6
      99.65% cov
      YP_001268744
      99.65% cov
    • Alignment Length
      865 aa
  • Pseudomonas putida GB-1

    Pseudomonas putida GB-1

    • Public DB hit
      GI:167032945
      YP_001668176
      1 of 2 hits reported for Pseudomonas putida GB-1.
    • Hit length
      862 aa
    • E Value
      0E0
    • BLAST Score
      1,547.3 bits
    • Similarity
      92.37%
    • Coverage
      99.65%
    • Alignment (schematic)

      SEQ ID NO 6
      99.65% cov
      YP_001668176
      99.77% cov
    • Alignment Length
      865 aa
  • Pseudomonas putida W619

    Pseudomonas putida W619

    • Public DB hit
      GI:170720962
      YP_001748650
      1 of 2 hits reported for Pseudomonas putida W619.
    • Hit length
      862 aa
    • E Value
      0E0
    • BLAST Score
      1,547.3 bits
    • Similarity
      92.37%
    • Coverage
      99.65%
    • Alignment (schematic)

      SEQ ID NO 6
      99.65% cov
      YP_001748650
      99.77% cov
    • Alignment Length
      865 aa
  • Pseudomonas putida KT2440

    Pseudomonas putida KT2440

    • Public DB hit
      GI:26989060
      NP_744485
      1 of 2 hits reported for Pseudomonas putida KT2440.
    • Hit length
      862 aa
    • E Value
      0E0
    • BLAST Score
      1,547.3 bits
    • Similarity
      92.6%
    • Coverage
      99.65%
    • Alignment (schematic)

      SEQ ID NO 6
      99.65% cov
      NP_744485
      99.77% cov
    • Alignment Length
      865 aa
  • Stenotrophomonas maltophilia R551-3

    Stenotrophomonas maltophilia R551-3

    • Public DB hit
      GI:194366800
      YP_002029410
    • Hit length
      872 aa
    • E Value
      0E0
    • BLAST Score
      1,538.1 bits
    • Similarity
      92.17%
    • Coverage
      99.77%
    • Alignment (schematic)

      SEQ ID NO 6
      99.77% cov
      YP_002029410
      99.66% cov
    • Alignment Length
      869 aa
  • Achromobacter xylosoxidans A8

    Achromobacter xylosoxidans A8

    • Public DB hit
      GI:311108894
      YP_003981747
    • Hit length
      869 aa
    • E Value
      0E0
    • BLAST Score
      1,534.6 bits
    • Similarity
      92.17%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      YP_003981747
      99.42% cov
    • Alignment Length
      869 aa
Occurrence
4 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
7
Length
868
Type
peptide
Locations
Drawings

Declared organism:
Pseudomonas aeruginosa 2192

Determined organism:
  • Pseudomonas aeruginosa PAO1

    Pseudomonas aeruginosa PAO1

    • Public DB hit
      GI:15595991
      NP_249485
    • Hit length
      868 aa
    • E Value
      0E0
    • BLAST Score
      1,770 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NP_249485
      100% cov
    • Alignment Length
      868 aa
    • CIGAR string
      868M mismatches: 0 - insertions: 0 - deletions: 0
  • Pseudomonas aeruginosa UCBPP-PA14

    Pseudomonas aeruginosa UCBPP-PA14

    • Public DB hit
      GI:116048712
      YP_792488
    • Hit length
      868 aa
    • E Value
      0E0
    • BLAST Score
      1,768.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      YP_792488
      100% cov
    • Alignment Length
      868 aa
    • CIGAR string
      492MN375M mismatches: 1 - insertions: 0 - deletions: 0
  • Pseudomonas aeruginosa PACS2

    Pseudomonas aeruginosa PACS2

    • Public DB hit
      GI:107100256
      ZP_01364174
      1 of 2 hits reported for Pseudomonas aeruginosa PACS2.
    • Hit length
      868 aa
    • E Value
      0E0
    • BLAST Score
      1,765.7 bits
    • Similarity
      99.88%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      ZP_01364174
      100% cov
    • Alignment Length
      868 aa
    • CIGAR string
      329MN162MN375M mismatches: 2 - insertions: 0 - deletions: 0
  • Pseudomonas aeruginosa C3719

    Pseudomonas aeruginosa C3719

    • Public DB hit
      GI:254239152
      ZP_04932475
      1 of 2 hits reported for Pseudomonas aeruginosa C3719.
    • Hit length
      868 aa
    • E Value
      0E0
    • BLAST Score
      1,765.7 bits
    • Similarity
      99.88%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      ZP_04932475
      100% cov
    • Alignment Length
      868 aa
  • Pseudomonas aeruginosa HB13

    Pseudomonas aeruginosa HB13

    • Public DB hit
      GI:334838520
      EGM17237
    • Hit length
      868 aa
    • E Value
      0E0
    • BLAST Score
      1,765.7 bits
    • Similarity
      99.88%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      EGM17237
      100% cov
    • Alignment Length
      868 aa
  • Pseudomonas aeruginosa PA7

    Pseudomonas aeruginosa PA7

    • Public DB hit
      GI:152987844
      YP_001350066
    • Hit length
      868 aa
    • E Value
      0E0
    • BLAST Score
      1,762.3 bits
    • Similarity
      99.77%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      YP_001350066
      100% cov
    • Alignment Length
      868 aa
  • Pseudomonas entomophila L48

    Pseudomonas entomophila L48

    • Public DB hit
      GI:104781049
      YP_607547
    • Hit length
      862 aa
    • E Value
      0E0
    • BLAST Score
      1,557 bits
    • Similarity
      92.6%
    • Coverage
      99.65%
    • Alignment (schematic)

      SEQ ID NO 7
      99.65% cov
      YP_607547
      99.77% cov
    • Alignment Length
      865 aa
  • Pseudomonas putida BIRD-1

    Pseudomonas putida BIRD-1

    • Public DB hit
      GI:313499580
      ADR60946
    • Hit length
      863 aa
    • E Value
      0E0
    • BLAST Score
      1,551.6 bits
    • Similarity
      92.72%
    • Coverage
      99.65%
    • Alignment (schematic)

      SEQ ID NO 7
      99.65% cov
      ADR60946
      99.65% cov
    • Alignment Length
      865 aa
  • Pseudomonas putida F1

    Pseudomonas putida F1

    • Public DB hit
      GI:148548642
      YP_001268744
    • Hit length
      863 aa
    • E Value
      0E0
    • BLAST Score
      1,548.1 bits
    • Similarity
      92.6%
    • Coverage
      99.65%
    • Alignment (schematic)

      SEQ ID NO 7
      99.65% cov
      YP_001268744
      99.65% cov
    • Alignment Length
      865 aa
  • Pseudomonas putida GB-1

    Pseudomonas putida GB-1

    • Public DB hit
      GI:167032945
      YP_001668176
      1 of 2 hits reported for Pseudomonas putida GB-1.
    • Hit length
      862 aa
    • E Value
      0E0
    • BLAST Score
      1,547.3 bits
    • Similarity
      92.37%
    • Coverage
      99.65%
    • Alignment (schematic)

      SEQ ID NO 7
      99.65% cov
      YP_001668176
      99.77% cov
    • Alignment Length
      865 aa
  • Pseudomonas putida W619

    Pseudomonas putida W619

    • Public DB hit
      GI:170720962
      YP_001748650
      1 of 2 hits reported for Pseudomonas putida W619.
    • Hit length
      862 aa
    • E Value
      0E0
    • BLAST Score
      1,547.3 bits
    • Similarity
      92.37%
    • Coverage
      99.65%
    • Alignment (schematic)

      SEQ ID NO 7
      99.65% cov
      YP_001748650
      99.77% cov
    • Alignment Length
      865 aa
  • Pseudomonas putida KT2440

    Pseudomonas putida KT2440

    • Public DB hit
      GI:26989060
      NP_744485
      1 of 2 hits reported for Pseudomonas putida KT2440.
    • Hit length
      862 aa
    • E Value
      0E0
    • BLAST Score
      1,547.3 bits
    • Similarity
      92.6%
    • Coverage
      99.65%
    • Alignment (schematic)

      SEQ ID NO 7
      99.65% cov
      NP_744485
      99.77% cov
    • Alignment Length
      865 aa
  • Stenotrophomonas maltophilia R551-3

    Stenotrophomonas maltophilia R551-3

    • Public DB hit
      GI:194366800
      YP_002029410
    • Hit length
      872 aa
    • E Value
      0E0
    • BLAST Score
      1,538.1 bits
    • Similarity
      92.17%
    • Coverage
      99.77%
    • Alignment (schematic)

      SEQ ID NO 7
      99.77% cov
      YP_002029410
      99.66% cov
    • Alignment Length
      869 aa
  • Achromobacter xylosoxidans A8

    Achromobacter xylosoxidans A8

    • Public DB hit
      GI:311108894
      YP_003981747
    • Hit length
      869 aa
    • E Value
      0E0
    • BLAST Score
      1,534.6 bits
    • Similarity
      92.17%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      YP_003981747
      99.42% cov
    • Alignment Length
      869 aa
Occurrence
4 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
8
Length
867
Type
peptide
Locations
Undetermined

Declared organism:
Neisseria gonorrhoeae 1291

Determined organism:
  • Neisseria meningitidis alpha14

    Neisseria meningitidis alpha14

    • Public DB hit
      GI:254805535
      YP_003083756
    • Hit length
      868 aa
    • E Value
      0E0
    • BLAST Score
      1,697.2 bits
    • Similarity
      97.69%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      YP_003083756
      99.65% cov
    • Alignment Length
      867 aa
    • CIGAR string
      2MN37MN13M2N125MD103MN25MN30M2N6MN79MN20MN37MNMN22MN38MN9MN6MN12MNMN2MN43MN11MN8MN45MD19MN47MN41MN7MN20MN5MN22M mismatches: 29 - insertions: 0 - deletions: 2
  • Neisseria meningitidis alpha275

    Neisseria meningitidis alpha275

    • Public DB hit
      GI:254672728
      CBA06695
    • Hit length
      868 aa
    • E Value
      0E0
    • BLAST Score
      1,695.6 bits
    • Similarity
      98.04%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      CBA06695
      99.65% cov
    • Alignment Length
      867 aa
    • CIGAR string
      2MN37MN13M2N84MN40MD28MN38M2N34MN25MN30M2N6MN79MN3MN16MN39MN78MN12MNMN2MN43MN11MN8MN45MDN18MN89MN7MN20MN5MN22M mismatches: 30 - insertions: 0 - deletions: 2
  • Neisseria meningitidis M6190

    Neisseria meningitidis M6190

    • Public DB hit
      GI:325132979
      EGC55656
    • Hit length
      868 aa
    • E Value
      0E0
    • BLAST Score
      1,695.2 bits
    • Similarity
      97.46%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      EGC55656
      99.65% cov
    • Alignment Length
      867 aa
    • CIGAR string
      2MN37MN13M2N125MD63MN39MN25MN30M2N6MN30MN48M2N9MN9MN39MN22MN38MN9MN6MN12MNMN2MN38MN4MN11MN8MN45MD67MN45MN3MN20MN5MN22M mismatches: 32 - insertions: 0 - deletions: 2
  • Neisseria meningitidis 961-5945

    Neisseria meningitidis 961-5945

    • Public DB hit
      GI:325142948
      EGC65306
    • Hit length
      868 aa
    • E Value
      0E0
    • BLAST Score
      1,693.3 bits
    • Similarity
      97.92%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      EGC65306
      99.65% cov
    • Alignment Length
      867 aa
  • Neisseria meningitidis FAM18

    Neisseria meningitidis FAM18

    • Public DB hit
      GI:121635433
      YP_975678
    • Hit length
      868 aa
    • E Value
      0E0
    • BLAST Score
      1,692.9 bits
    • Similarity
      97.35%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      YP_975678
      99.65% cov
    • Alignment Length
      867 aa
  • Neisseria meningitidis M13399

    Neisseria meningitidis M13399

    • Public DB hit
      GI:325134899
      EGC57532
    • Hit length
      868 aa
    • E Value
      0E0
    • BLAST Score
      1,691.8 bits
    • Similarity
      97.81%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      EGC57532
      99.65% cov
    • Alignment Length
      867 aa
  • Neisseria flavescens SK114

    Neisseria flavescens SK114

    • Public DB hit
      GI:241760562
      ZP_04758655
    • Hit length
      868 aa
    • E Value
      0E0
    • BLAST Score
      1,691.4 bits
    • Similarity
      97.46%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      ZP_04758655
      99.65% cov
    • Alignment Length
      867 aa
  • Neisseria mucosa C102

    Neisseria mucosa C102

    • Public DB hit
      GI:319638216
      ZP_07992979
      1 of 2 hits reported for Neisseria mucosa C102.
    • Hit length
      868 aa
    • E Value
      0E0
    • BLAST Score
      1,691 bits
    • Similarity
      97.58%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      ZP_07992979
      99.65% cov
    • Alignment Length
      867 aa
  • Neisseria meningitidis ATCC 13091

    Neisseria meningitidis ATCC 13091

    • Public DB hit
      GI:304386700
      ZP_07368973
      1 of 2 hits reported for Neisseria meningitidis ATCC 13091.
    • Hit length
      868 aa
    • E Value
      0E0
    • BLAST Score
      1,691 bits
    • Similarity
      97.58%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      ZP_07368973
      99.65% cov
    • Alignment Length
      867 aa
  • Neisseria meningitidis Z2491

    Neisseria meningitidis Z2491

    • Public DB hit
      GI:218768800
      YP_002343312
    • Hit length
      868 aa
    • E Value
      0E0
    • BLAST Score
      1,690.6 bits
    • Similarity
      97.46%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      YP_002343312
      99.65% cov
    • Alignment Length
      867 aa
  • Neisseria meningitidis M01-240013

    Neisseria meningitidis M01-240013

    • Public DB hit
      GI:325144971
      EGC67254
    • Hit length
      868 aa
    • E Value
      0E0
    • BLAST Score
      1,690.2 bits
    • Similarity
      97.58%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      EGC67254
      99.65% cov
    • Alignment Length
      867 aa
  • Neisseria meningitidis alpha153

    Neisseria meningitidis alpha153

    • Public DB hit
      GI:254671071
      CBA07971
    • Hit length
      868 aa
    • E Value
      0E0
    • BLAST Score
      1,690.2 bits
    • Similarity
      97.69%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      CBA07971
      99.65% cov
    • Alignment Length
      867 aa
  • Neisseria subflava NJ9703

    Neisseria subflava NJ9703

    • Public DB hit
      GI:284799962
      ZP_05985323
      1 of 2 hits reported for Neisseria subflava NJ9703.
    • Hit length
      934 aa
    • E Value
      0E0
    • BLAST Score
      1,689.9 bits
    • Similarity
      97.58%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      ZP_05985323
      92.61% cov
    • Alignment Length
      867 aa
  • Neisseria meningitidis 053442

    Neisseria meningitidis 053442

    • Public DB hit
      GI:161870643
      YP_001599816
      1 of 2 hits reported for Neisseria meningitidis 053442.
    • Hit length
      868 aa
    • E Value
      0E0
    • BLAST Score
      1,689.9 bits
    • Similarity
      97.46%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      YP_001599816
      99.65% cov
    • Alignment Length
      867 aa
  • Neisseria meningitidis WUE 2594

    Neisseria meningitidis WUE 2594

    • Public DB hit
      GI:319411039
      CBY91439
    • Hit length
      868 aa
    • E Value
      0E0
    • BLAST Score
      1,689.9 bits
    • Similarity
      97.46%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      CBY91439
      99.65% cov
    • Alignment Length
      867 aa
  • Neisseria meningitidis M01-240355

    Neisseria meningitidis M01-240355

    • Public DB hit
      GI:325203540
      ADY98993
    • Hit length
      868 aa
    • E Value
      0E0
    • BLAST Score
      1,689.5 bits
    • Similarity
      97.46%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      ADY98993
      99.65% cov
    • Alignment Length
      867 aa
  • Neisseria meningitidis alpha710

    Neisseria meningitidis alpha710

    • Public DB hit
      GI:308388635
      ADO30955
    • Hit length
      868 aa
    • E Value
      0E0
    • BLAST Score
      1,689.5 bits
    • Similarity
      97.35%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      ADO30955
      99.65% cov
    • Alignment Length
      867 aa
Occurrence
2 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
9
Length
865
Type
peptide
Locations
Undetermined

Declared organism:
Neisseria meningitidis 053442

Determined organism:
  • Neisseria meningitidis Z2491

    Neisseria meningitidis Z2491

    • Public DB hit
      GI:218768800
      YP_002343312
    • Hit length
      868 aa
    • E Value
      0E0
    • BLAST Score
      1,786.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      YP_002343312
      99.65% cov
    • Alignment Length
      865 aa
    • CIGAR string
      865M mismatches: 0 - insertions: 0 - deletions: 0
  • Neisseria meningitidis WUE 2594

    Neisseria meningitidis WUE 2594

    • Public DB hit
      GI:319411039
      CBY91439
    • Hit length
      868 aa
    • E Value
      0E0
    • BLAST Score
      1,786.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      CBY91439
      99.65% cov
    • Alignment Length
      865 aa
    • CIGAR string
      351MN513M mismatches: 1 - insertions: 0 - deletions: 0
  • Neisseria meningitidis ATCC 13091

    Neisseria meningitidis ATCC 13091

    • Public DB hit
      GI:304386700
      ZP_07368973
    • Hit length
      868 aa
    • E Value
      0E0
    • BLAST Score
      1,768.4 bits
    • Similarity
      99.42%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      ZP_07368973
      99.65% cov
    • Alignment Length
      865 aa
    • CIGAR string
      23MN313MN42MN18MN33MN23MN104MN6MN14MN132MN114MN32M mismatches: 11 - insertions: 0 - deletions: 0
  • Neisseria meningitidis M6190

    Neisseria meningitidis M6190

    • Public DB hit
      GI:325132979
      EGC55656
    • Hit length
      868 aa
    • E Value
      0E0
    • BLAST Score
      1,765.7 bits
    • Similarity
      99.31%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      EGC55656
      99.65% cov
    • Alignment Length
      865 aa
  • Neisseria meningitidis FAM18

    Neisseria meningitidis FAM18

    • Public DB hit
      GI:121635433
      YP_975678
    • Hit length
      868 aa
    • E Value
      0E0
    • BLAST Score
      1,765.4 bits
    • Similarity
      99.19%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      YP_975678
      99.65% cov
    • Alignment Length
      865 aa
  • Neisseria meningitidis N1568

    Neisseria meningitidis N1568

    • Public DB hit
      GI:325128848
      EGC51707
    • Hit length
      868 aa
    • E Value
      0E0
    • BLAST Score
      1,762.7 bits
    • Similarity
      99.08%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      EGC51707
      99.65% cov
    • Alignment Length
      865 aa
  • Neisseria meningitidis alpha14

    Neisseria meningitidis alpha14

    • Public DB hit
      GI:254805535
      YP_003083756
      1 of 2 hits reported for Neisseria meningitidis alpha14.
    • Hit length
      868 aa
    • E Value
      0E0
    • BLAST Score
      1,758.8 bits
    • Similarity
      98.96%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      YP_003083756
      99.65% cov
    • Alignment Length
      865 aa
  • Neisseria flavescens SK114

    Neisseria flavescens SK114

    • Public DB hit
      GI:241760562
      ZP_04758655
      1 of 2 hits reported for Neisseria flavescens SK114.
    • Hit length
      868 aa
    • E Value
      0E0
    • BLAST Score
      1,758.8 bits
    • Similarity
      98.84%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      ZP_04758655
      99.65% cov
    • Alignment Length
      865 aa
  • Neisseria meningitidis M01-240013

    Neisseria meningitidis M01-240013

    • Public DB hit
      GI:325144971
      EGC67254
    • Hit length
      868 aa
    • E Value
      0E0
    • BLAST Score
      1,758.4 bits
    • Similarity
      99.08%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      EGC67254
      99.65% cov
    • Alignment Length
      865 aa
  • Neisseria meningitidis alpha153

    Neisseria meningitidis alpha153

    • Public DB hit
      GI:254671071
      CBA07971
    • Hit length
      868 aa
    • E Value
      0E0
    • BLAST Score
      1,757.7 bits
    • Similarity
      99.19%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      CBA07971
      99.65% cov
    • Alignment Length
      865 aa
  • Neisseria subflava NJ9703

    Neisseria subflava NJ9703

    • Public DB hit
      GI:284799962
      ZP_05985323
    • Hit length
      934 aa
    • E Value
      0E0
    • BLAST Score
      1,755.7 bits
    • Similarity
      98.96%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      ZP_05985323
      92.61% cov
    • Alignment Length
      865 aa
  • Neisseria meningitidis M0579

    Neisseria meningitidis M0579

    • Public DB hit
      GI:325137000
      EGC59597
    • Hit length
      868 aa
    • E Value
      0E0
    • BLAST Score
      1,755.3 bits
    • Similarity
      98.84%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      EGC59597
      99.65% cov
    • Alignment Length
      865 aa
  • Neisseria meningitidis OX99.30304

    Neisseria meningitidis OX99.30304

    • Public DB hit
      GI:325130801
      EGC53535
    • Hit length
      868 aa
    • E Value
      0E0
    • BLAST Score
      1,754.2 bits
    • Similarity
      98.73%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      EGC53535
      99.65% cov
    • Alignment Length
      865 aa
  • Neisseria meningitidis 053442

    Neisseria meningitidis 053442

    • Public DB hit
      GI:161870643
      YP_001599816
    • Hit length
      868 aa
    • E Value
      0E0
    • BLAST Score
      1,731.1 bits
    • Similarity
      98.96%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      YP_001599816
      99.65% cov
    • Alignment Length
      865 aa
  • Neisseria meningitidis alpha275

    Neisseria meningitidis alpha275

    • Public DB hit
      GI:254672728
      CBA06695
    • Hit length
      868 aa
    • E Value
      0E0
    • BLAST Score
      1,729.9 bits
    • Similarity
      99.08%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      CBA06695
      99.65% cov
    • Alignment Length
      865 aa
  • Neisseria meningitidis M01-240355

    Neisseria meningitidis M01-240355

    • Public DB hit
      GI:325203540
      ADY98993
    • Hit length
      868 aa
    • E Value
      0E0
    • BLAST Score
      1,729.5 bits
    • Similarity
      98.84%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      ADY98993
      99.65% cov
    • Alignment Length
      865 aa
  • Neisseria meningitidis MC58

    Neisseria meningitidis MC58

    • Public DB hit
      GI:15676345
      NP_273481
    • Hit length
      868 aa
    • E Value
      0E0
    • BLAST Score
      1,728.4 bits
    • Similarity
      98.96%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      NP_273481
      99.65% cov
    • Alignment Length
      865 aa
Occurrence
2 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
10
Length
860
Type
peptide
Locations
Undetermined

Declared organism:
Bordetella parapertussis 12822

Determined organism:
  • Bordetella pertussis Tohama I

    Bordetella pertussis Tohama I

    • Public DB hit
      GI:161610759
      NP_881003
      1 of 2 hits reported for Bordetella pertussis Tohama I.
    • Hit length
      864 aa
    • E Value
      0E0
    • BLAST Score
      1,768.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      NP_881003
      99.54% cov
    • Alignment Length
      860 aa
    • CIGAR string
      860M mismatches: 0 - insertions: 0 - deletions: 0
  • Bordetella bronchiseptica RB50

    Bordetella bronchiseptica RB50

    • Public DB hit
      GI:161609264
      NP_890222
      1 of 2 hits reported for Bordetella bronchiseptica RB50.
    • Hit length
      864 aa
    • E Value
      0E0
    • BLAST Score
      1,762.3 bits
    • Similarity
      99.88%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      NP_890222
      99.54% cov
    • Alignment Length
      860 aa
    • CIGAR string
      189MN435MN233MN mismatches: 3 - insertions: 0 - deletions: 0
  • Bordetella parapertussis 12822

    Bordetella parapertussis 12822

    • Public DB hit
      GI:161610384
      NP_885403
    • Hit length
      864 aa
    • E Value
      0E0
    • BLAST Score
      1,760.7 bits
    • Similarity
      99.88%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      NP_885403
      99.54% cov
    • Alignment Length
      860 aa
  • Bordetella parapertussis

    Bordetella parapertussis

    • Public DB hit
      GI:33574189
      CAE38520
    • Hit length
      897 aa
    • E Value
      0E0
    • BLAST Score
      1,757.7 bits
    • Similarity
      99.88%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      CAE38520
      95.88% cov
    • Alignment Length
      860 aa
  • Xanthomonas campestris pv. campestris str. ATCC 33913

    Xanthomonas campestris pv. campestris str. ATCC 33913

    • Public DB hit
      GI:21230491
      NP_636408
    • Hit length
      864 aa
    • E Value
      0E0
    • BLAST Score
      1,538.1 bits
    • Similarity
      91.28%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      NP_636408
      99.54% cov
    • Alignment Length
      860 aa
  • Burkholderia multivorans ATCC 17616

    Burkholderia multivorans ATCC 17616

    • Public DB hit
      GI:189353983
      YP_001949610
      1 of 4 hits reported for Burkholderia multivorans ATCC 17616.
    • Hit length
      865 aa
    • E Value
      0E0
    • BLAST Score
      1,535.8 bits
    • Similarity
      92.09%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      YP_001949610
      99.42% cov
    • Alignment Length
      860 aa
  • Xanthomonas campestris pv. vesicatoria str. 85-10

    Xanthomonas campestris pv. vesicatoria str. 85-10

    • Public DB hit
      GI:78046714
      YP_362889
    • Hit length
      864 aa
    • E Value
      0E0
    • BLAST Score
      1,535 bits
    • Similarity
      91.86%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      YP_362889
      99.54% cov
    • Alignment Length
      860 aa
  • Xanthomonas campestris pv. campestris str. B100

    Xanthomonas campestris pv. campestris str. B100

    • Public DB hit
      GI:188992707
      YP_001904717
    • Hit length
      864 aa
    • E Value
      0E0
    • BLAST Score
      1,534.6 bits
    • Similarity
      91.4%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      YP_001904717
      99.54% cov
    • Alignment Length
      860 aa
  • Burkholderia multivorans CGD2M

    Burkholderia multivorans CGD2M

    • Public DB hit
      GI:221200681
      ZP_03573722
    • Hit length
      866 aa
    • E Value
      0E0
    • BLAST Score
      1,533.5 bits
    • Similarity
      91.98%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      ZP_03573722
      99.31% cov
    • Alignment Length
      860 aa
  • Xanthomonas perforans 91-118

    Xanthomonas perforans 91-118

    • Public DB hit
      GI:325925290
      ZP_08186693
    • Hit length
      864 aa
    • E Value
      0E0
    • BLAST Score
      1,533.1 bits
    • Similarity
      91.74%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      ZP_08186693
      99.54% cov
    • Alignment Length
      860 aa
  • Burkholderia multivorans CGD1

    Burkholderia multivorans CGD1

    • Public DB hit
      GI:221210364
      ZP_03583344
    • Hit length
      866 aa
    • E Value
      0E0
    • BLAST Score
      1,532.3 bits
    • Similarity
      92.09%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      ZP_03583344
      99.31% cov
    • Alignment Length
      860 aa
Occurrence
2 times in PatSeqDB
Tools
PatSeq Finder

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