Attenuated Salmonella Enterica Serovar Paratyphi A And Uses Thereof

  • Published: Jul 2, 2013
  • Earliest Priority: Oct 28 2005
  • Family: 11
  • Cited Works: 93
  • Cited by: 1
  • Cites: 9
  • Sequences: 40
  • Additional Info: Cited Works Full text
Data obtained from: EMBL-EBI Pat DDBJ Pat USPTO Fulltext NCBI GenBank
40 sequences found in this patent (in total)

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Download sequences in fasta format: 40 nucleotides

Displaying 1 - 10 of 40 sequences

SEQ ID NO
Length
Sequence Type
Locations
Declared organism
Determined organism
Occurrence
Tools
SEQ ID NO
1
Length
489
Sequence Type
nucleotide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
Occurrence
10 times in PatSeqDB
Tools
SEQ ID NO
2
Length
634
Sequence Type
nucleotide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
Occurrence
10 times in PatSeqDB
Tools
SEQ ID NO
3
Length
370
Sequence Type
nucleotide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
Occurrence
10 times in PatSeqDB
Tools
SEQ ID NO
4
Length
27
Sequence Type
nucleotide
Locations
Undetermined
Declared organism
Artificial
Determined organism
Occurrence
10 times in PatSeqDB
Tools
SEQ ID NO
5
Length
18
Sequence Type
nucleotide
Locations
Undetermined
Declared organism
Artificial
Determined organism
Occurrence
10 times in PatSeqDB
Tools
SEQ ID NO
6
Length
17
Sequence Type
nucleotide
Locations
Undetermined
Declared organism
Artificial
Determined organism
  • uncultured bacterium

    uncultured bacterium

    • Public DB hit
      GI:192758187
      EU769164
    • Hit length
      781 bp
    • E Value
      4.15E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      EU769164
      2.18% cov
    • Alignment Length
      17 bp
    • CIGAR string
      17M mismatches: 0 - insertions: 0 - deletions: 0
  • Oryza sativa Japonica Group

    Oryza sativa Japonica Group

    • Public DB hit
      GI:17933035
      AP003243
    • Hit length
      138,701 bp
    • E Value
      4.15E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      AP003243
      0.01% cov
    • Alignment Length
      17 bp
    • CIGAR string
      17M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:61675814
      AC118585
    • Hit length
      153,334 bp
    • E Value
      4.15E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      AC118585
      0.01% cov
    • Alignment Length
      17 bp
    • CIGAR string
      17M mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
10 times in PatSeqDB
Tools
SEQ ID NO
7
Length
20
Sequence Type
nucleotide
Locations
Undetermined
Declared organism
Artificial
Determined organism
  • PCR amplification vector pCLF1

    PCR amplification vector pCLF1

    • Public DB hit
      GI:326322095
      HM047090
    • Hit length
      2,994 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      HM047090
      0.67% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • PCR amplification vector pCLF2

    PCR amplification vector pCLF2

    • Public DB hit
      GI:326322092
      HM047089
    • Hit length
      3,043 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      HM047089
      0.66% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Cloning vector pJW106

    Cloning vector pJW106

    • Public DB hit
      GI:291220468
      GU589576
    • Hit length
      2,109 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      GU589576
      0.95% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Cloning vector pJW105

    Cloning vector pJW105

    • Public DB hit
      GI:291220466
      GU589575
    • Hit length
      1,112 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      GU589575
      1.8% cov
    • Alignment Length
      20 bp
  • Cloning vector pJW104

    Cloning vector pJW104

    • Public DB hit
      GI:291220464
      GU589574
    • Hit length
      1,150 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      GU589574
      1.74% cov
    • Alignment Length
      20 bp
  • Cloning vector pJW102

    Cloning vector pJW102

    • Public DB hit
      GI:291220460
      GU589572
    • Hit length
      2,050 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      GU589572
      0.98% cov
    • Alignment Length
      20 bp
  • Cloning vector pJW101

    Cloning vector pJW101

    • Public DB hit
      GI:291220458
      GU589571
    • Hit length
      1,053 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      GU589571
      1.9% cov
    • Alignment Length
      20 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:262073570
      GU066315
      1 of 2 hits reported for synthetic construct.
    • Hit length
      1,812 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      GU066315
      1.1% cov
    • Alignment Length
      20 bp
  • Template plasmid pCLF4

    Template plasmid pCLF4

    • Public DB hit
      GI:192757949
      EU629214
    • Hit length
      3,337 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      EU629214
      0.6% cov
    • Alignment Length
      20 bp
  • Template plasmid pCLF3

    Template plasmid pCLF3

    • Public DB hit
      GI:192757946
      EU629213
    • Hit length
      2,874 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      EU629213
      0.7% cov
    • Alignment Length
      20 bp
  • Cloning vector pCPP5243

    Cloning vector pCPP5243

    • Public DB hit
      GI:154814582
      EU024552
    • Hit length
      5,137 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      EU024552
      0.39% cov
    • Alignment Length
      20 bp
  • Cloning vector pCPP5242

    Cloning vector pCPP5242

    • Public DB hit
      GI:154814579
      EU024551
    • Hit length
      3,249 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      EU024551
      0.62% cov
    • Alignment Length
      20 bp
  • Cloning vector pCPP5212

    Cloning vector pCPP5212

    • Public DB hit
      GI:154814575
      EU024550
    • Hit length
      4,833 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      EU024550
      0.41% cov
    • Alignment Length
      20 bp
  • Cloning vector pCPP5209

    Cloning vector pCPP5209

    • Public DB hit
      GI:154814572
      EU024549
    • Hit length
      2,946 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      EU024549
      0.68% cov
    • Alignment Length
      20 bp
  • Cloning vector pCPP5250

    Cloning vector pCPP5250

    • Public DB hit
      GI:154814568
      EU024548
    • Hit length
      5,155 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      EU024548
      0.39% cov
    • Alignment Length
      20 bp
  • Cloning vector pCPP5249

    Cloning vector pCPP5249

    • Public DB hit
      GI:154814564
      EU024547
    • Hit length
      4,699 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      EU024547
      0.43% cov
    • Alignment Length
      20 bp
  • Gene-trap donor vector pZGs

    Gene-trap donor vector pZGs

    • Public DB hit
      GI:148807251
      EF591490
    • Hit length
      10,662 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      EF591490
      0.19% cov
    • Alignment Length
      20 bp
  • Gene-trap donor vector pZGm

    Gene-trap donor vector pZGm

    • Public DB hit
      GI:148807248
      EF591489
    • Hit length
      11,277 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      EF591489
      0.18% cov
    • Alignment Length
      20 bp
  • Gene-trap donor vector pZGl

    Gene-trap donor vector pZGl

    • Public DB hit
      GI:148807245
      EF591488
    • Hit length
      11,815 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      EF591488
      0.17% cov
    • Alignment Length
      20 bp
  • Template plasmid pKD4

    Template plasmid pKD4

    • Public DB hit
      GI:15554332
      AY048743
    • Hit length
      3,267 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      AY048743
      0.61% cov
    • Alignment Length
      20 bp
  • Template plasmid pKD3

    Template plasmid pKD3

    • Public DB hit
      GI:15554329
      AY048742
    • Hit length
      2,804 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      AY048742
      0.71% cov
    • Alignment Length
      20 bp
  • CRIM plasmid pLA5

    CRIM plasmid pLA5

    • Public DB hit
      GI:29414407
      AY150263
    • Hit length
      5,771 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      AY150263
      0.35% cov
    • Alignment Length
      20 bp
  • CRIM plasmid pLA4

    CRIM plasmid pLA4

    • Public DB hit
      GI:29414127
      AY150262
    • Hit length
      5,771 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      AY150262
      0.35% cov
    • Alignment Length
      20 bp
  • Recombineering donor plasmid pDOC-G

    Recombineering donor plasmid pDOC-G

    • Public DB hit
      GI:260505755
      GQ889498
    • Hit length
      7,943 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      95%
    • Alignment (schematic)

      SEQ ID NO 7
      95% cov
      GQ889498
      0.24% cov
    • Alignment Length
      19 bp
Occurrence
32 times in PatSeqDB
Tools
SEQ ID NO
8
Length
119
Sequence Type
nucleotide
Locations
Undetermined
Declared organism
Artificial
Determined organism
Occurrence
12 times in PatSeqDB
Tools
SEQ ID NO
9
Length
120
Sequence Type
nucleotide
Locations
Undetermined
Declared organism
Artificial
Determined organism
Occurrence
12 times in PatSeqDB
Tools
SEQ ID NO
10
Length
28
Sequence Type
nucleotide
Locations
Undetermined
Declared organism
Artificial
Determined organism
Occurrence
10 times in PatSeqDB
Tools

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