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Search for Biological Sequences disclosed in Patents

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Data obtained from: DDBJ Pat NCBI GenBank (EBI) EMBL-EBI Pat EPO Sequence Listings
8 sequences found in this patent (in total)

Displaying 8 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
2,400
Type
DNA
Locations
Fulltext

Declared organism:
Triticum aestivum

Determined organism:
  • Triticum aestivum

    Triticum aestivum

    • Public DB hit
      GI:7529652
      AJ269502
      1 of 6 hits reported for Triticum aestivum.
    • Hit length
      2,866 bp
    • E Value
      0E0
    • BLAST Score
      4,427.5 bits
    • Similarity
      99.96%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      AJ269502
      83.74% cov
    • Alignment Length
      2,400 bp
    • CIGAR string
      615MN1784M mismatches: 1 - insertions: 0 - deletions: 0
  • Hordeum vulgare subsp. vulgare

    Hordeum vulgare subsp. vulgare

    • Public DB hit
      GI:326517594
      AK372518
      1 of 2 hits reported for Hordeum vulgare subsp. vulgare.
    • Hit length
      2,889 bp
    • E Value
      0E0
    • BLAST Score
      2,902.2 bits
    • Similarity
      95.59%
    • Coverage
      75.46%
    • Alignment (schematic)

      SEQ ID NO 1
      75.46% cov
      AK372518
      62.69% cov
    • Alignment Length
      1,815 bp
  • Sorghum bicolor

    Sorghum bicolor

    • Public DB hit
      GI:186695417
      EU620718
      1 of 2 hits reported for Sorghum bicolor.
    • Hit length
      2,400 bp
    • E Value
      0E0
    • BLAST Score
      1,748.1 bits
    • Similarity
      86.39%
    • Coverage
      67.29%
    • Alignment (schematic)

      SEQ ID NO 1
      67.29% cov
      EU620718
      67.29% cov
    • Alignment Length
      1,638 bp
  • Oryza sativa Indica Group

    Oryza sativa Indica Group

    • Public DB hit
      GI:60417788
      AB115918
      1 of 2 hits reported for Oryza sativa Indica Group.
    • Hit length
      2,433 bp
    • E Value
      0E0
    • BLAST Score
      1,672.3 bits
    • Similarity
      86.66%
    • Coverage
      63.33%
    • Alignment (schematic)

      SEQ ID NO 1
      63.33% cov
      AB115918
      62.47% cov
    • Alignment Length
      1,537 bp
  • Zea mays

    Zea mays

    • Public DB hit
      GI:238007757
      BT084561
      1 of 3 hits reported for Zea mays.
    • Hit length
      2,603 bp
    • E Value
      0E0
    • BLAST Score
      1,670.5 bits
    • Similarity
      85.52%
    • Coverage
      67.29%
    • Alignment (schematic)

      SEQ ID NO 1
      67.29% cov
      BT084561
      62.04% cov
    • Alignment Length
      1,637 bp
  • Oryza sativa Japonica Group

    Oryza sativa Japonica Group

    • Public DB hit
      GI:115467233
      NM_001063751
      1 of 4 hits reported for Oryza sativa Japonica Group.
    • Hit length
      2,959 bp
    • E Value
      0E0
    • BLAST Score
      1,661.3 bits
    • Similarity
      86.52%
    • Coverage
      63.33%
    • Alignment (schematic)

      SEQ ID NO 1
      63.33% cov
      NM_001063751
      51.37% cov
    • Alignment Length
      1,536 bp
  • Oryza sativa

    Oryza sativa

    • Public DB hit
      GI:16265833
      AF419099
    • Hit length
      2,959 bp
    • E Value
      0E0
    • BLAST Score
      1,661.3 bits
    • Similarity
      86.52%
    • Coverage
      63.33%
    • Alignment (schematic)

      SEQ ID NO 1
      63.33% cov
      AF419099
      51.37% cov
    • Alignment Length
      1,536 bp
Occurrence
22 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
799
Type
peptide
Locations
Claims, Fulltext

Declared organism:
Triticum aestivum

Determined organism:
  • Triticum aestivum

    Triticum aestivum

    • Public DB hit
      GI:82943648
      BAE48800
      1 of 6 hits reported for Triticum aestivum.
    • Hit length
      799 aa
    • E Value
      0E0
    • BLAST Score
      1,643.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      BAE48800
      100% cov
    • Alignment Length
      799 aa
    • CIGAR string
      799M mismatches: 0 - insertions: 0 - deletions: 0
  • Aegilops tauschii

    Aegilops tauschii

    • Public DB hit
      GI:23476265
      AAN28308
    • Hit length
      799 aa
    • E Value
      0E0
    • BLAST Score
      1,637.9 bits
    • Similarity
      99.75%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      AAN28308
      100% cov
    • Alignment Length
      799 aa
    • CIGAR string
      28MN45MN584MN139M mismatches: 3 - insertions: 0 - deletions: 0
  • Hordeum vulgare subsp. vulgare

    Hordeum vulgare subsp. vulgare

    • Public DB hit
      GI:23476267
      AAN28309
      1 of 3 hits reported for Hordeum vulgare subsp. vulgare.
    • Hit length
      802 aa
    • E Value
      0E0
    • BLAST Score
      1,442.9 bits
    • Similarity
      91.86%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      AAN28309
      100% cov
    • Alignment Length
      811 aa
  • Zea mays

    Zea mays

    • Public DB hit
      GI:238007758
      ACR34914
    • Hit length
      732 aa
    • E Value
      0E0
    • BLAST Score
      1,049.3 bits
    • Similarity
      75.35%
    • Coverage
      98.75%
    • Alignment (schematic)

      SEQ ID NO 2
      98.75% cov
      ACR34914
      98.22% cov
    • Alignment Length
      795 aa
  • Sorghum bicolor

    Sorghum bicolor

    • Public DB hit
      GI:186695418
      ACC86844
      1 of 2 hits reported for Sorghum bicolor.
    • Hit length
      743 aa
    • E Value
      0E0
    • BLAST Score
      1,038.1 bits
    • Similarity
      75.35%
    • Coverage
      98.75%
    • Alignment (schematic)

      SEQ ID NO 2
      98.75% cov
      ACC86844
      98.25% cov
    • Alignment Length
      795 aa
  • Oryza sativa Indica Group

    Oryza sativa Indica Group

    • Public DB hit
      GI:158517737
      P0C586
      1 of 4 hits reported for Oryza sativa Indica Group.
    • Hit length
      810 aa
    • E Value
      0E0
    • BLAST Score
      995 bits
    • Similarity
      76.81%
    • Coverage
      90.36%
    • Alignment (schematic)

      SEQ ID NO 2
      90.36% cov
      P0C586
      87.65% cov
    • Alignment Length
      733 aa
  • Oryza sativa Japonica Group

    Oryza sativa Japonica Group

    • Public DB hit
      GI:262345673
      ACY56200
      1 of 3 hits reported for Oryza sativa Japonica Group.
    • Hit length
      810 aa
    • E Value
      0E0
    • BLAST Score
      992.3 bits
    • Similarity
      76.67%
    • Coverage
      90.36%
    • Alignment (schematic)

      SEQ ID NO 2
      90.36% cov
      ACY56200
      87.65% cov
    • Alignment Length
      733 aa
  • Oryza sativa

    Oryza sativa

    • Public DB hit
      GI:15384987
      CAC59826
    • Hit length
      637 aa
    • E Value
      0E0
    • BLAST Score
      903.7 bits
    • Similarity
      79.4%
    • Coverage
      77.6%
    • Alignment (schematic)

      SEQ ID NO 2
      77.6% cov
      CAC59826
      99.37% cov
    • Alignment Length
      636 aa
Occurrence
130 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
3
Length
20
Type
DNA
Locations
Fulltext

Declared organism:
Artificial

Determined organism:
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:170015350
      AC207005
      1 of 2 hits reported for Pongo abelii.
    • Hit length
      191,667 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      AC207005
      0.01% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Aegilops tauschii

    Aegilops tauschii

    • Public DB hit
      GI:23476264
      AY133248
    • Hit length
      9,024 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      AY133248
      0.22% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Triticum aestivum

    Triticum aestivum

    • Public DB hit
      GI:82943647
      AB201447
      1 of 2 hits reported for Triticum aestivum.
    • Hit length
      7,010 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      AB201447
      0.29% cov
    • Alignment Length
      20 bp
  • Trichomonas vaginalis G3

    Trichomonas vaginalis G3

    • Public DB hit
      GI:123420524
      XM_001305774
      1 of 2 hits reported for Trichomonas vaginalis G3.
    • Hit length
      999 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      95%
    • Alignment (schematic)

      SEQ ID NO 3
      95% cov
      XM_001305774
      1.9% cov
    • Alignment Length
      19 bp
  • Selenomonas sputigena ATCC 35185

    Selenomonas sputigena ATCC 35185

    • Public DB hit
      GI:329745630
      CP002637
    • Hit length
      2,568,361 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      95%
    • Alignment (schematic)

      SEQ ID NO 3
      95% cov
      CP002637
      0% cov
    • Alignment Length
      19 bp
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:3482962
      AC004996
    • Hit length
      100,921 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      95%
    • Alignment (schematic)

      SEQ ID NO 3
      95% cov
      AC004996
      0.02% cov
    • Alignment Length
      19 bp
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:61741047
      AC157527
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      210,196 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      95%
    • Alignment (schematic)

      SEQ ID NO 3
      95% cov
      AC157527
      0.01% cov
    • Alignment Length
      19 bp
Occurrence
9 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
4
Length
20
Type
DNA
Locations
Fulltext

Declared organism:
Artificial

Determined organism:
  • Hordeum vulgare subsp. vulgare

    Hordeum vulgare subsp. vulgare

    • Public DB hit
      GI:326517594
      AK372518
      1 of 3 hits reported for Hordeum vulgare subsp. vulgare.
    • Hit length
      2,889 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      AK372518
      0.69% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Aegilops tauschii

    Aegilops tauschii

    • Public DB hit
      GI:23476264
      AY133248
    • Hit length
      9,024 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      AY133248
      0.22% cov
    • Alignment Length
      20 bp
  • Triticum aestivum

    Triticum aestivum

    • Public DB hit
      GI:82943647
      AB201447
      1 of 4 hits reported for Triticum aestivum.
    • Hit length
      7,010 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      AB201447
      0.29% cov
    • Alignment Length
      20 bp
Occurrence
9 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
5
Length
27
Type
DNA
Locations
Fulltext

Declared organism:
Artificial

Determined organism:
  • Hordeum vulgare subsp. vulgare

    Hordeum vulgare subsp. vulgare

    • Public DB hit
      GI:326517594
      AK372518
      1 of 3 hits reported for Hordeum vulgare subsp. vulgare.
    • Hit length
      2,889 bp
    • E Value
      1.78E-5
    • BLAST Score
      54 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      AK372518
      0.93% cov
    • Alignment Length
      27 bp
    • CIGAR string
      27M mismatches: 0 - insertions: 0 - deletions: 0
  • Aegilops tauschii

    Aegilops tauschii

    • Public DB hit
      GI:23476264
      AY133248
    • Hit length
      9,024 bp
    • E Value
      1.78E-5
    • BLAST Score
      54 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      AY133248
      0.3% cov
    • Alignment Length
      27 bp
  • Triticum aestivum

    Triticum aestivum

    • Public DB hit
      GI:82943647
      AB201447
      1 of 8 hits reported for Triticum aestivum.
    • Hit length
      7,010 bp
    • E Value
      1.78E-5
    • BLAST Score
      54 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      AB201447
      0.39% cov
    • Alignment Length
      27 bp
Occurrence
9 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
6
Length
20
Type
DNA
Locations
Fulltext

Declared organism:
Artificial

Determined organism:
  • Zea mays

    Zea mays

    • Public DB hit
      GI:308081564
      NR_036655
    • Hit length
      1,809 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NR_036655
      1.11% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Sorghum bicolor

    Sorghum bicolor

    • Public DB hit
      GI:242068422
      XM_002449443
      1 of 2 hits reported for Sorghum bicolor.
    • Hit length
      171 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_002449443
      11.7% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Boehmeria macrophylla var. scabrella

    Boehmeria macrophylla var. scabrella

    • Public DB hit
      GI:336239095
      JF317378
    • Hit length
      1,725 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      JF317378
      1.16% cov
    • Alignment Length
      20 bp
  • Ulmus macrocarpa

    Ulmus macrocarpa

    • Public DB hit
      GI:336239094
      JF317377
    • Hit length
      1,725 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      JF317377
      1.16% cov
    • Alignment Length
      20 bp
  • Trema angustifolia

    Trema angustifolia

    • Public DB hit
      GI:336239093
      JF317376
    • Hit length
      1,701 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      JF317376
      1.18% cov
    • Alignment Length
      20 bp
  • Sanguisorba sitchensis

    Sanguisorba sitchensis

    • Public DB hit
      GI:336239092
      JF317375
    • Hit length
      1,724 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      JF317375
      1.16% cov
    • Alignment Length
      20 bp
  • Rhamnus utilis

    Rhamnus utilis

    • Public DB hit
      GI:336239091
      JF317374
    • Hit length
      1,712 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      JF317374
      1.17% cov
    • Alignment Length
      20 bp
  • Pilea cadierei

    Pilea cadierei

    • Public DB hit
      GI:336239090
      JF317373
    • Hit length
      1,726 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      JF317373
      1.16% cov
    • Alignment Length
      20 bp
  • Neillia thibetica

    Neillia thibetica

    • Public DB hit
      GI:336239089
      JF317372
    • Hit length
      1,717 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      JF317372
      1.16% cov
    • Alignment Length
      20 bp
  • Hovenia trichocarpa var. robusta

    Hovenia trichocarpa var. robusta

    • Public DB hit
      GI:336239088
      JF317371
    • Hit length
      1,727 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      JF317371
      1.16% cov
    • Alignment Length
      20 bp
  • Hippophae rhamnoides subsp. sinensis

    Hippophae rhamnoides subsp. sinensis

    • Public DB hit
      GI:336239087
      JF317370
    • Hit length
      1,724 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      JF317370
      1.16% cov
    • Alignment Length
      20 bp
  • Gouania mauritiana

    Gouania mauritiana

    • Public DB hit
      GI:336239086
      JF317369
    • Hit length
      1,710 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      JF317369
      1.17% cov
    • Alignment Length
      20 bp
  • Filipendula vulgaris

    Filipendula vulgaris

    • Public DB hit
      GI:336239085
      JF317368
    • Hit length
      1,725 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      JF317368
      1.16% cov
    • Alignment Length
      20 bp
  • Ficus tikoua

    Ficus tikoua

    • Public DB hit
      GI:336239084
      JF317367
    • Hit length
      1,723 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      JF317367
      1.16% cov
    • Alignment Length
      20 bp
  • Elaeagnus bockii

    Elaeagnus bockii

    • Public DB hit
      GI:336239083
      JF317366
    • Hit length
      1,724 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      JF317366
      1.16% cov
    • Alignment Length
      20 bp
  • Dryas octopetala

    Dryas octopetala

    • Public DB hit
      GI:336239082
      JF317365
    • Hit length
      1,725 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      JF317365
      1.16% cov
    • Alignment Length
      20 bp
  • Dirachma socotrana

    Dirachma socotrana

    • Public DB hit
      GI:336239081
      JF317364
    • Hit length
      1,709 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      JF317364
      1.17% cov
    • Alignment Length
      20 bp
  • Debregeasia saeneb

    Debregeasia saeneb

    • Public DB hit
      GI:336239080
      JF317363
    • Hit length
      1,723 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      JF317363
      1.16% cov
    • Alignment Length
      20 bp
  • Maclura tricuspidata

    Maclura tricuspidata

    • Public DB hit
      GI:336239079
      JF317362
    • Hit length
      1,725 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      JF317362
      1.16% cov
    • Alignment Length
      20 bp
  • Celtis tetrandra

    Celtis tetrandra

    • Public DB hit
      GI:336239078
      JF317361
    • Hit length
      1,724 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      JF317361
      1.16% cov
    • Alignment Length
      20 bp
  • Cannabis sativa

    Cannabis sativa

    • Public DB hit
      GI:336239077
      JF317360
    • Hit length
      1,701 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      JF317360
      1.18% cov
    • Alignment Length
      20 bp
  • Broussonetia papyrifera

    Broussonetia papyrifera

    • Public DB hit
      GI:336239076
      JF317359
    • Hit length
      1,710 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      JF317359
      1.17% cov
    • Alignment Length
      20 bp
  • Barbeya oleoides

    Barbeya oleoides

    • Public DB hit
      GI:336239075
      JF317358
    • Hit length
      1,708 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      JF317358
      1.17% cov
    • Alignment Length
      20 bp
  • Lamium purpureum

    Lamium purpureum

    • Public DB hit
      GI:334691680
      HQ384694
    • Hit length
      1,749 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      HQ384694
      1.14% cov
    • Alignment Length
      20 bp
Occurrence
9 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
7
Length
19
Type
DNA
Locations
Fulltext

Declared organism:
Artificial

Determined organism:
  • Zea mays

    Zea mays

    • Public DB hit
      GI:308081564
      NR_036655
    • Hit length
      1,809 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NR_036655
      1.05% cov
    • Alignment Length
      19 bp
    • CIGAR string
      19M mismatches: 0 - insertions: 0 - deletions: 0
  • Plasmodium falciparum 3D7

    Plasmodium falciparum 3D7

    • Public DB hit
      GI:296005609
      XM_002809073
    • Hit length
      120 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XM_002809073
      15.83% cov
    • Alignment Length
      19 bp
    • CIGAR string
      19M mismatches: 0 - insertions: 0 - deletions: 0
  • Perkinsus marinus ATCC 50983

    Perkinsus marinus ATCC 50983

    • Public DB hit
      GI:294934493
      XM_002781067
      1 of 2 hits reported for Perkinsus marinus ATCC 50983.
    • Hit length
      207 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XM_002781067
      9.18% cov
    • Alignment Length
      19 bp
    • CIGAR string
      19M mismatches: 0 - insertions: 0 - deletions: 0
  • Micromonas sp. RCC299

    Micromonas sp. RCC299

    • Public DB hit
      GI:255081503
      XM_002507928
    • Hit length
      201 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XM_002507928
      9.45% cov
    • Alignment Length
      19 bp
  • Sorghum bicolor

    Sorghum bicolor

    • Public DB hit
      GI:253758617
      XM_002488843
      1 of 3 hits reported for Sorghum bicolor.
    • Hit length
      1,614 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XM_002488843
      1.18% cov
    • Alignment Length
      19 bp
  • Plasmodium yoelii yoelii 17XNL

    Plasmodium yoelii yoelii 17XNL

    • Public DB hit
      GI:82594721
      XM_720453
      1 of 2 hits reported for Plasmodium yoelii yoelii 17XNL.
    • Hit length
      1,209 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XM_720453
      1.57% cov
    • Alignment Length
      19 bp
  • Plasmodium chabaudi chabaudi

    Plasmodium chabaudi chabaudi

    • Public DB hit
      GI:70940540
      XM_735580
    • Hit length
      150 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XM_735580
      12.67% cov
    • Alignment Length
      19 bp
  • Boehmeria macrophylla var. scabrella

    Boehmeria macrophylla var. scabrella

    • Public DB hit
      GI:336239095
      JF317378
    • Hit length
      1,725 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      JF317378
      1.1% cov
    • Alignment Length
      19 bp
  • Ulmus macrocarpa

    Ulmus macrocarpa

    • Public DB hit
      GI:336239094
      JF317377
    • Hit length
      1,725 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      JF317377
      1.1% cov
    • Alignment Length
      19 bp
  • Trema angustifolia

    Trema angustifolia

    • Public DB hit
      GI:336239093
      JF317376
    • Hit length
      1,701 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      JF317376
      1.12% cov
    • Alignment Length
      19 bp
  • Sanguisorba sitchensis

    Sanguisorba sitchensis

    • Public DB hit
      GI:336239092
      JF317375
    • Hit length
      1,724 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      JF317375
      1.1% cov
    • Alignment Length
      19 bp
  • Rhamnus utilis

    Rhamnus utilis

    • Public DB hit
      GI:336239091
      JF317374
    • Hit length
      1,712 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      JF317374
      1.11% cov
    • Alignment Length
      19 bp
  • Pilea cadierei

    Pilea cadierei

    • Public DB hit
      GI:336239090
      JF317373
    • Hit length
      1,726 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      JF317373
      1.1% cov
    • Alignment Length
      19 bp
  • Neillia thibetica

    Neillia thibetica

    • Public DB hit
      GI:336239089
      JF317372
    • Hit length
      1,717 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      JF317372
      1.11% cov
    • Alignment Length
      19 bp
  • Hovenia trichocarpa var. robusta

    Hovenia trichocarpa var. robusta

    • Public DB hit
      GI:336239088
      JF317371
    • Hit length
      1,727 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      JF317371
      1.1% cov
    • Alignment Length
      19 bp
  • Hippophae rhamnoides subsp. sinensis

    Hippophae rhamnoides subsp. sinensis

    • Public DB hit
      GI:336239087
      JF317370
    • Hit length
      1,724 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      JF317370
      1.1% cov
    • Alignment Length
      19 bp
  • Gouania mauritiana

    Gouania mauritiana

    • Public DB hit
      GI:336239086
      JF317369
    • Hit length
      1,710 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      JF317369
      1.11% cov
    • Alignment Length
      19 bp
  • Filipendula vulgaris

    Filipendula vulgaris

    • Public DB hit
      GI:336239085
      JF317368
    • Hit length
      1,725 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      JF317368
      1.1% cov
    • Alignment Length
      19 bp
  • Ficus tikoua

    Ficus tikoua

    • Public DB hit
      GI:336239084
      JF317367
    • Hit length
      1,723 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      JF317367
      1.1% cov
    • Alignment Length
      19 bp
  • Elaeagnus bockii

    Elaeagnus bockii

    • Public DB hit
      GI:336239083
      JF317366
    • Hit length
      1,724 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      JF317366
      1.1% cov
    • Alignment Length
      19 bp
  • Dryas octopetala

    Dryas octopetala

    • Public DB hit
      GI:336239082
      JF317365
    • Hit length
      1,725 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      JF317365
      1.1% cov
    • Alignment Length
      19 bp
Occurrence
17 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
8
Length
26
Type
DNA
Locations
Fulltext

Declared organism:
Artificial

Determined organism:
  • Acyrthosiphon pisum

    Acyrthosiphon pisum

    • Public DB hit
      GI:328724531
      XR_119577
      1 of 5 hits reported for Acyrthosiphon pisum.
    • Hit length
      1,778 bp
    • E Value
      6.17E-5
    • BLAST Score
      52 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XR_119577
      1.46% cov
    • Alignment Length
      26 bp
    • CIGAR string
      26M mismatches: 0 - insertions: 0 - deletions: 0
  • Zea mays

    Zea mays

    • Public DB hit
      GI:308081564
      NR_036655
    • Hit length
      1,809 bp
    • E Value
      6.17E-5
    • BLAST Score
      52 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NR_036655
      1.44% cov
    • Alignment Length
      26 bp
  • Volvox carteri f. nagariensis

    Volvox carteri f. nagariensis

    • Public DB hit
      GI:302857840
      XM_002959918
      1 of 5 hits reported for Volvox carteri f. nagariensis.
    • Hit length
      165 bp
    • E Value
      6.17E-5
    • BLAST Score
      52 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XM_002959918
      15.76% cov
    • Alignment Length
      26 bp
  • Plasmodium falciparum 3D7

    Plasmodium falciparum 3D7

    • Public DB hit
      GI:296005609
      XM_002809073
    • Hit length
      120 bp
    • E Value
      6.17E-5
    • BLAST Score
      52 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XM_002809073
      21.67% cov
    • Alignment Length
      26 bp
  • Perkinsus marinus ATCC 50983

    Perkinsus marinus ATCC 50983

    • Public DB hit
      GI:294934493
      XM_002781067
      1 of 2 hits reported for Perkinsus marinus ATCC 50983.
    • Hit length
      207 bp
    • E Value
      6.17E-5
    • BLAST Score
      52 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XM_002781067
      12.56% cov
    • Alignment Length
      26 bp
  • Saccoglossus kowalevskii

    Saccoglossus kowalevskii

    • Public DB hit
      GI:291241388
      XR_086610
    • Hit length
      1,658 bp
    • E Value
      6.17E-5
    • BLAST Score
      52 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XR_086610
      1.57% cov
    • Alignment Length
      26 bp
  • Branchiostoma floridae

    Branchiostoma floridae

    • Public DB hit
      GI:260817511
      XM_002603584
      1 of 2 hits reported for Branchiostoma floridae.
    • Hit length
      1,318 bp
    • E Value
      6.17E-5
    • BLAST Score
      52 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XM_002603584
      1.97% cov
    • Alignment Length
      26 bp
  • Micromonas sp. RCC299

    Micromonas sp. RCC299

    • Public DB hit
      GI:255081503
      XM_002507928
    • Hit length
      201 bp
    • E Value
      6.17E-5
    • BLAST Score
      52 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XM_002507928
      12.94% cov
    • Alignment Length
      26 bp
  • Sorghum bicolor

    Sorghum bicolor

    • Public DB hit
      GI:253758617
      XM_002488843
      1 of 3 hits reported for Sorghum bicolor.
    • Hit length
      1,614 bp
    • E Value
      6.17E-5
    • BLAST Score
      52 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XM_002488843
      1.61% cov
    • Alignment Length
      26 bp
  • Talaromyces stipitatus ATCC 10500

    Talaromyces stipitatus ATCC 10500

    • Public DB hit
      GI:242805354
      XM_002484464
    • Hit length
      468 bp
    • E Value
      6.17E-5
    • BLAST Score
      52 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XM_002484464
      5.56% cov
    • Alignment Length
      26 bp
  • unspecified (taxid:6085)

    unspecified (taxid:6085)

    • Public DB hit
      GI:221135712
      XM_002170945
      1 of 3 hits reported for taxid:6085.
    • Hit length
      1,018 bp
    • E Value
      6.17E-5
    • BLAST Score
      52 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XM_002170945
      2.55% cov
    • Alignment Length
      26 bp
Occurrence
9 times in PatSeqDB
Tools
PatSeq Finder

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