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Search for Biological Sequences disclosed in Patents

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Data obtained from: DDBJ Pat NCBI GenBank (DDBJ) EMBL-EBI Pat
8 sequences found in this patent (in total)

Displaying 8 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
396
Type
DNA
Locations
Undetermined

Declared organism:
Mus musculus

Determined organism:
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:50365856
      AY648641
      1 of 22 hits reported for Mus musculus.
    • Hit length
      432 bp
    • E Value
      1.94E-147
    • BLAST Score
      531.1 bits
    • Similarity
      98.67%
    • Coverage
      75.51%
    • Alignment (schematic)

      SEQ ID NO 1
      75.51% cov
      AY648641
      69.44% cov
    • Alignment Length
      300 bp
    • CIGAR string
      135MN45MN62MN49MI5M97H mismatches: 3 - insertions: 1 - deletions: 0
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:86371703
      DQ358916
    • Hit length
      360 bp
    • E Value
      5.43E-143
    • BLAST Score
      516.3 bits
    • Similarity
      92.25%
    • Coverage
      93.94%
    • Alignment (schematic)

      SEQ ID NO 1
      93.94% cov
      DQ358916
      100% cov
    • Alignment Length
      374 bp
    • CIGAR string
      6MN11MNMN114MN45MN62MN38MN6M2DMN5D2MDMD3MNMN3MI3MNMN2M4D6MN16MD2MI21M24H mismatches: 13 - insertions: 2 - deletions: 14
  • Mus musculus domesticus

    Mus musculus domesticus

    • Public DB hit
      GI:310695290
      HM448827
      1 of 2 hits reported for Mus musculus domesticus.
    • Hit length
      325 bp
    • E Value
      1.19E-129
    • BLAST Score
      472 bits
    • Similarity
      95.89%
    • Coverage
      73.23%
    • Alignment (schematic)

      SEQ ID NO 1
      73.23% cov
      HM448827
      89.85% cov
    • Alignment Length
      292 bp
Occurrence
14 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
472
Type
DNA
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:50365856
      AY648641
      1 of 22 hits reported for Mus musculus.
    • Hit length
      432 bp
    • E Value
      1.34E-179
    • BLAST Score
      638.2 bits
    • Similarity
      98.61%
    • Coverage
      76.27%
    • Alignment (schematic)

      SEQ ID NO 2
      76.27% cov
      AY648641
      83.56% cov
    • Alignment Length
      361 bp
    • CIGAR string
      15H14MN181MN45MN62MN49MI5M97H mismatches: 4 - insertions: 1 - deletions: 0
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:86371703
      DQ358916
    • Hit length
      360 bp
    • E Value
      6.57E-143
    • BLAST Score
      516.3 bits
    • Similarity
      92.25%
    • Coverage
      78.81%
    • Alignment (schematic)

      SEQ ID NO 2
      78.81% cov
      DQ358916
      100% cov
    • Alignment Length
      374 bp
  • Mus musculus domesticus

    Mus musculus domesticus

    • Public DB hit
      GI:310695290
      HM448827
    • Hit length
      325 bp
    • E Value
      1.44E-129
    • BLAST Score
      472 bits
    • Similarity
      95.89%
    • Coverage
      61.44%
    • Alignment (schematic)

      SEQ ID NO 2
      61.44% cov
      HM448827
      89.85% cov
    • Alignment Length
      292 bp
Occurrence
13 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
3
Length
336
Type
DNA
Locations
Undetermined

Declared organism:
Mus musculus

Determined organism:
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:171674481
      EU568244
      1 of 21 hits reported for Mus musculus.
    • Hit length
      322 bp
    • E Value
      5.71E-162
    • BLAST Score
      579.1 bits
    • Similarity
      99.07%
    • Coverage
      95.83%
    • Alignment (schematic)

      SEQ ID NO 3
      95.83% cov
      EU568244
      100% cov
    • Alignment Length
      322 bp
    • CIGAR string
      135MN2MN133MN49M14H mismatches: 3 - insertions: 0 - deletions: 0
  • Mus musculus domesticus

    Mus musculus domesticus

    • Public DB hit
      GI:297681
      Z22116
    • Hit length
      321 bp
    • E Value
      1.25E-148
    • BLAST Score
      534.8 bits
    • Similarity
      96.57%
    • Coverage
      95.54%
    • Alignment (schematic)

      SEQ ID NO 3
      95.54% cov
      Z22116
      100% cov
    • Alignment Length
      321 bp
  • Mus sp.

    Mus sp.

    • Public DB hit
      GI:385848
      S61689
      1 of 2 hits reported for Mus sp..
    • Hit length
      490 bp
    • E Value
      3.51E-144
    • BLAST Score
      520 bits
    • Similarity
      95.72%
    • Coverage
      96.13%
    • Alignment (schematic)

      SEQ ID NO 3
      96.13% cov
      S61689
      65.92% cov
    • Alignment Length
      327 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:1236090
      U49832
    • Hit length
      902 bp
    • E Value
      3.51E-144
    • BLAST Score
      520 bits
    • Similarity
      95.68%
    • Coverage
      96.13%
    • Alignment (schematic)

      SEQ ID NO 3
      96.13% cov
      U49832
      35.81% cov
    • Alignment Length
      324 bp
Occurrence
14 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
4
Length
415
Type
DNA
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:74215085
      AK155958
      1 of 21 hits reported for Mus musculus.
    • Hit length
      966 bp
    • E Value
      0E0
    • BLAST Score
      665.9 bits
    • Similarity
      97.92%
    • Coverage
      92.53%
    • Alignment (schematic)

      SEQ ID NO 4
      92.53% cov
      AK155958
      39.75% cov
    • Alignment Length
      384 bp
    • CIGAR string
      18H11MN14MN46MN5MN116MN2MN133MN13MN36M13H mismatches: 8 - insertions: 0 - deletions: 0
  • Mus sp.

    Mus sp.

    • Public DB hit
      GI:385848
      S61689
    • Hit length
      490 bp
    • E Value
      2.55E-171
    • BLAST Score
      610.5 bits
    • Similarity
      95.36%
    • Coverage
      92.53%
    • Alignment (schematic)

      SEQ ID NO 4
      92.53% cov
      S61689
      78.37% cov
    • Alignment Length
      388 bp
    • CIGAR string
      18H11MN14MN46MN5MN116MN2MN133MN11MIMIM2D8MIMI2MD2MD2MN3MN7MN5M13H mismatches: 10 - insertions: 4 - deletions: 4
  • Mus musculus domesticus

    Mus musculus domesticus

    • Public DB hit
      GI:309362
      L20959
      1 of 3 hits reported for Mus musculus domesticus.
    • Hit length
      381 bp
    • E Value
      5.52E-168
    • BLAST Score
      599.4 bits
    • Similarity
      95.04%
    • Coverage
      91.81%
    • Alignment (schematic)

      SEQ ID NO 4
      91.81% cov
      L20959
      100% cov
    • Alignment Length
      383 bp
Occurrence
13 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
5
Length
124
Type
peptide
Locations
Undetermined

Declared organism:
Mus musculus (house mouse)

Determined organism:
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:86371704
      ABC94918
    • Hit length
      120 aa
    • E Value
      2.48E-54
    • BLAST Score
      215.7 bits
    • Similarity
      91.94%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      ABC94918
      100% cov
    • Alignment Length
      124 aa
    • CIGAR string
      2MN3MN38MN14MN20MN12MN2M3NM4DM2N2MN5MN7M mismatches: 13 - insertions: 0 - deletions: 4
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:194691
      AAA37998
      1 of 23 hits reported for Mus musculus.
    • Hit length
      120 aa
    • E Value
      7.47E-53
    • BLAST Score
      210.7 bits
    • Similarity
      89.52%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      AAA37998
      99.17% cov
    • Alignment Length
      124 aa
    • CIGAR string
      5MN9MN18MN6MN3MN3MN3MN6MN7MN12MN17MNM5D2N2MN5MN7M mismatches: 15 - insertions: 0 - deletions: 5
  • Mus musculus domesticus

    Mus musculus domesticus

    • Public DB hit
      GI:288711
      CAA80018
    • Hit length
      117 aa
    • E Value
      1.05E-51
    • BLAST Score
      206.8 bits
    • Similarity
      89.52%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      CAA80018
      99.15% cov
    • Alignment Length
      124 aa
Occurrence
35 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
6
Length
149
Type
peptide
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:50365857
      AAT76230
      1 of 22 hits reported for Mus musculus.
    • Hit length
      144 aa
    • E Value
      4.13E-65
    • BLAST Score
      251.5 bits
    • Similarity
      90.97%
    • Coverage
      96.64%
    • Alignment (schematic)

      SEQ ID NO 6
      96.64% cov
      AAT76230
      97.22% cov
    • Alignment Length
      144 aa
    • CIGAR string
      5H4MN60MN14MN20MN16MNM4D2NM5NMN2MN2MN4M mismatches: 15 - insertions: 0 - deletions: 4
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:86371704
      ABC94918
      1 of 2 hits reported for synthetic construct.
    • Hit length
      120 aa
    • E Value
      1.01E-54
    • BLAST Score
      216.9 bits
    • Similarity
      91.94%
    • Coverage
      83.22%
    • Alignment (schematic)

      SEQ ID NO 6
      83.22% cov
      ABC94918
      100% cov
    • Alignment Length
      124 aa
  • Mus sp.

    Mus sp.

    • Public DB hit
      GI:9488897
      AAB30378
    • Hit length
      149 aa
    • E Value
      2.22E-54
    • BLAST Score
      215.7 bits
    • Similarity
      84.62%
    • Coverage
      95.97%
    • Alignment (schematic)

      SEQ ID NO 6
      95.97% cov
      AAB30378
      93.29% cov
    • Alignment Length
      143 aa
Occurrence
17 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
7
Length
107
Type
peptide
Locations
Undetermined

Declared organism:
Mus musculus (house mouse)

Determined organism:
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:171674482
      ACB48001
      1 of 21 hits reported for Mus musculus.
    • Hit length
      107 aa
    • E Value
      8.94E-56
    • BLAST Score
      220.3 bits
    • Similarity
      99.07%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      ACB48001
      100% cov
    • Alignment Length
      107 aa
    • CIGAR string
      45MN61M mismatches: 1 - insertions: 0 - deletions: 0
  • Mus sp.

    Mus sp.

    • Public DB hit
      GI:385849
      AAC60658
    • Hit length
      131 aa
    • E Value
      2.6E-54
    • BLAST Score
      215.7 bits
    • Similarity
      97.2%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      AAC60658
      81.68% cov
    • Alignment Length
      107 aa
    • CIGAR string
      45MN49MN3MN7M mismatches: 3 - insertions: 0 - deletions: 0
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:24987241
      1F6L_L
    • Hit length
      114 aa
    • E Value
      4.71E-54
    • BLAST Score
      214.9 bits
    • Similarity
      97.2%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      1F6L_L
      93.86% cov
    • Alignment Length
      107 aa
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:263921
      AAB25018
    • Hit length
      243 aa
    • E Value
      2.83E-53
    • BLAST Score
      212.2 bits
    • Similarity
      96.26%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      AAB25018
      44.03% cov
    • Alignment Length
      107 aa
  • Mus musculus domesticus

    Mus musculus domesticus

    • Public DB hit
      GI:309363
      AAB01616
    • Hit length
      127 aa
    • E Value
      6.05E-53
    • BLAST Score
      211.1 bits
    • Similarity
      97.2%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      AAB01616
      84.25% cov
    • Alignment Length
      107 aa
Occurrence
40 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
8
Length
133
Type
peptide
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:74215086
      BAE33522
      1 of 19 hits reported for Mus musculus.
    • Hit length
      234 aa
    • E Value
      1.5E-60
    • BLAST Score
      236.5 bits
    • Similarity
      96.85%
    • Coverage
      95.49%
    • Alignment (schematic)

      SEQ ID NO 8
      95.49% cov
      BAE33522
      54.27% cov
    • Alignment Length
      127 aa
    • CIGAR string
      6H3MN4MN15MNMN38MN49MN11M mismatches: 6 - insertions: 0 - deletions: 0
  • Mus sp.

    Mus sp.

    • Public DB hit
      GI:385849
      AAC60658
      1 of 2 hits reported for Mus sp..
    • Hit length
      131 aa
    • E Value
      1.68E-59
    • BLAST Score
      233 bits
    • Similarity
      96.06%
    • Coverage
      95.49%
    • Alignment (schematic)

      SEQ ID NO 8
      95.49% cov
      AAC60658
      96.95% cov
    • Alignment Length
      127 aa
    • CIGAR string
      6H3MN4MN15MNMN38MN49MN3MN7M mismatches: 7 - insertions: 0 - deletions: 0
  • Mus musculus domesticus

    Mus musculus domesticus

    • Public DB hit
      GI:309363
      AAB01616
      1 of 3 hits reported for Mus musculus domesticus.
    • Hit length
      127 aa
    • E Value
      6.9E-59
    • BLAST Score
      230.7 bits
    • Similarity
      96.85%
    • Coverage
      95.49%
    • Alignment (schematic)

      SEQ ID NO 8
      95.49% cov
      AAB01616
      100% cov
    • Alignment Length
      127 aa
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:24987241
      1F6L_L
    • Hit length
      114 aa
    • E Value
      7.96E-54
    • BLAST Score
      214.2 bits
    • Similarity
      97.2%
    • Coverage
      80.45%
    • Alignment (schematic)

      SEQ ID NO 8
      80.45% cov
      1F6L_L
      93.86% cov
    • Alignment Length
      107 aa
Occurrence
17 times in PatSeqDB
Tools
PatSeq Finder

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