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Search for Biological Sequences disclosed in Patents

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Data obtained from: NCBI GenBank USPTO Fulltext EMBL-EBI Pat
7 sequences found in this patent (in total)

Displaying 7 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
35
Type
peptide
Locations
Undetermined

Declared organism:
Human immunodeficiency virus

Determined organism:
  • Human immunodeficiency virus 1

    Human immunodeficiency virus 1

    • Public DB hit
      GI:190352038
      ACE76443
      1 of 24 hits reported for Human immunodeficiency virus 1.
    • Hit length
      851 aa
    • E Value
      6.18E-14
    • BLAST Score
      81.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      ACE76443
      4.11% cov
    • Alignment Length
      35 aa
    • CIGAR string
      35M mismatches: 0 - insertions: 0 - deletions: 0
  • Human immunodeficiency virus type 1 (isolate YU2)

    Human immunodeficiency virus type 1 (isolate YU2)

    • Public DB hit
      GI:544246
      P35961
    • Hit length
      843 aa
    • E Value
      8.14E-13
    • BLAST Score
      77.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      P35961
      4.15% cov
    • Alignment Length
      35 aa
Occurrence
5 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
35
Type
peptide
Locations
Undetermined

Declared organism:
Human immunodeficiency virus

Determined organism:
  • Human immunodeficiency virus 1

    Human immunodeficiency virus 1

    • Public DB hit
      GI:295238364
      ADF83987
      1 of 21 hits reported for Human immunodeficiency virus 1.
    • Hit length
      875 aa
    • E Value
      1.17E-13
    • BLAST Score
      80.5 bits
    • Similarity
      97.14%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      ADF83987
      4% cov
    • Alignment Length
      35 aa
    • CIGAR string
      21MN13M mismatches: 1 - insertions: 0 - deletions: 0
  • Simian-Human immunodeficiency virus

    Simian-Human immunodeficiency virus

    • Public DB hit
      GI:333610063
      AEF59508
      1 of 4 hits reported for Simian-Human immunodeficiency virus.
    • Hit length
      555 aa
    • E Value
      1.55E-12
    • BLAST Score
      77 bits
    • Similarity
      97.14%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      AEF59508
      6.31% cov
    • Alignment Length
      35 aa
Occurrence
5 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
3
Length
35
Type
peptide
Locations
Undetermined

Declared organism:
Human immunodeficiency virus

Determined organism:
  • Human immunodeficiency virus 1

    Human immunodeficiency virus 1

    • Public DB hit
      GI:289598055
      ADD12413
      1 of 25 hits reported for Human immunodeficiency virus 1.
    • Hit length
      869 aa
    • E Value
      4.97E-15
    • BLAST Score
      85.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      ADD12413
      4.03% cov
    • Alignment Length
      35 aa
    • CIGAR string
      35M mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
14 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
4
Length
34
Type
peptide
Locations
Undetermined

Declared organism:
Human immunodeficiency virus

Determined organism:
  • Human immunodeficiency virus 1

    Human immunodeficiency virus 1

    • Public DB hit
      GI:475628
      AAB04069
      1 of 25 hits reported for Human immunodeficiency virus 1.
    • Hit length
      873 aa
    • E Value
      2.81E-12
    • BLAST Score
      75.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      AAB04069
      3.89% cov
    • Alignment Length
      34 aa
    • CIGAR string
      34M mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
5 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
5
Length
35
Type
peptide
Locations
Undetermined

Declared organism:
Human immunodeficiency virus

Determined organism:
  • Human immunodeficiency virus 1

    Human immunodeficiency virus 1

    • Public DB hit
      GI:326769
      AAA75116
      1 of 25 hits reported for Human immunodeficiency virus 1.
    • Hit length
      854 aa
    • E Value
      4E-14
    • BLAST Score
      82 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      AAA75116
      4.1% cov
    • Alignment Length
      35 aa
    • CIGAR string
      35M mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
9 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
6
Length
35
Type
peptide
Locations
Undetermined

Declared organism:
Human immunodeficiency virus

Determined organism:
  • Human immunodeficiency virus 1

    Human immunodeficiency virus 1

    • Public DB hit
      GI:298199653
      ADI59761
      1 of 25 hits reported for Human immunodeficiency virus 1.
    • Hit length
      859 aa
    • E Value
      5.5E-15
    • BLAST Score
      85.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      ADI59761
      4.07% cov
    • Alignment Length
      35 aa
    • CIGAR string
      35M mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
20 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
7
Length
36
Type
peptide
Locations
Undetermined

Declared organism:
Human immunodeficiency virus

Determined organism:
  • Human immunodeficiency virus 1

    Human immunodeficiency virus 1

    • Public DB hit
      GI:902806
      AAB60578
      1 of 19 hits reported for Human immunodeficiency virus 1.
    • Hit length
      854 aa
    • E Value
      3.35E-14
    • BLAST Score
      82.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      AAB60578
      4.22% cov
    • Alignment Length
      36 aa
    • CIGAR string
      36M mismatches: 0 - insertions: 0 - deletions: 0
  • HIV-1 vector pNL4-3

    HIV-1 vector pNL4-3

    • Public DB hit
      GI:296556484
      AAK08489
    • Hit length
      854 aa
    • E Value
      3.35E-14
    • BLAST Score
      82.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      AAK08489
      4.22% cov
    • Alignment Length
      36 aa
    • CIGAR string
      36M mismatches: 0 - insertions: 0 - deletions: 0
  • HIV-1 vector pNL-DT5R

    HIV-1 vector pNL-DT5R

    • Public DB hit
      GI:116062033
      BAF34648
    • Hit length
      854 aa
    • E Value
      3.64E-14
    • BLAST Score
      82.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      BAF34648
      4.22% cov
    • Alignment Length
      36 aa
    • CIGAR string
      36M mismatches: 0 - insertions: 0 - deletions: 0
  • Human immunodeficiency virus type 1 BH10

    Human immunodeficiency virus type 1 BH10

    • Public DB hit
      GI:119427
      P03375
    • Hit length
      856 aa
    • E Value
      4.34E-14
    • BLAST Score
      82 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      P03375
      4.21% cov
    • Alignment Length
      36 aa
  • Human immunodeficiency virus type 1 (HXB3 ISOLATE)

    Human immunodeficiency virus type 1 (HXB3 ISOLATE)

    • Public DB hit
      GI:1352374
      P04624
    • Hit length
      856 aa
    • E Value
      1.14E-13
    • BLAST Score
      80.5 bits
    • Similarity
      97.22%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      P04624
      4.21% cov
    • Alignment Length
      36 aa
  • Human immunodeficiency virus type 1 (BRU ISOLATE)

    Human immunodeficiency virus type 1 (BRU ISOLATE)

    • Public DB hit
      GI:119433
      P03377
    • Hit length
      861 aa
    • E Value
      2.1E-13
    • BLAST Score
      79.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      P03377
      4.18% cov
    • Alignment Length
      36 aa
  • Human immunodeficiency virus type 1 (MFA ISOLATE)

    Human immunodeficiency virus type 1 (MFA ISOLATE)

    • Public DB hit
      GI:119450
      P19551
    • Hit length
      853 aa
    • E Value
      2.14E-13
    • BLAST Score
      79.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      P19551
      4.22% cov
    • Alignment Length
      36 aa
Occurrence
44 times in PatSeqDB
Tools
PatSeq Finder

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