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Search for Biological Sequences disclosed in Patents

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Data obtained from: DDBJ Pat NCBI GenBank (EBI) EMBL-EBI Pat EPO Sequence Listings
35 sequences found in this patent (in total)

Displaying 1 - 10 of 35 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
1,684
Type
DNA
Locations
Undetermined

Declared organism:
Borago officinalis

Determined organism:
  • Borago officinalis

    Borago officinalis

    • Public DB hit
      GI:4102020
      AF007561
      1 of 3 hits reported for Borago officinalis.
    • Hit length
      1,685 bp
    • E Value
      0E0
    • BLAST Score
      3,099.8 bits
    • Similarity
      99.88%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      AF007561
      99.94% cov
    • Alignment Length
      1,685 bp
    • CIGAR string
      1617MI3MD63M mismatches: 0 - insertions: 1 - deletions: 1
  • Argania spinosa

    Argania spinosa

    • Public DB hit
      GI:22296825
      AY131238
    • Hit length
      1,347 bp
    • E Value
      0E0
    • BLAST Score
      2,377.8 bits
    • Similarity
      98.52%
    • Coverage
      79.99%
    • Alignment (schematic)

      SEQ ID NO 1
      79.99% cov
      AY131238
      100% cov
    • Alignment Length
      1,347 bp
    • CIGAR string
      42H82M2N31MN165MN42M2N57MN12M2N13MN22MN45MN93MN139MN50MN85MN98MN74MN19MN119MN181M295H mismatches: 20 - insertions: 0 - deletions: 0
  • Nonea caspica

    Nonea caspica

    • Public DB hit
      GI:89077588
      DQ367892
    • Hit length
      1,574 bp
    • E Value
      0E0
    • BLAST Score
      1,908.7 bits
    • Similarity
      89.46%
    • Coverage
      89.79%
    • Alignment (schematic)

      SEQ ID NO 1
      89.79% cov
      DQ367892
      96.95% cov
    • Alignment Length
      1,537 bp
    • CIGAR string
      19H4MN5MNMN6MN9MN2MN10MN17MN2MN2MN5MN8MN17MN5MN5MNMN12M2N7MN17MNMN3MN7MN42MN6MN5MINMD16MN45MN2MN56MN9MNMN5MN8MN10MN18MN59MN5MN5MN27MN13MN15MN11MN12MNMN8MN7MN29MN12MN4MN8MN5MN41MN12M3N7M2N5MN7MD5MNMI11MN3MN19MN24MN8MN18MN31MNMN12MN10MN3MN6MI2MNMD7MN8MN15MN12MI4MD7MNMN9MN7MN2MNM2N8MN8MN11MN5MN11MN14MN3MNIMD17MN5MN5MN5MN17MN20MN5MN11MN3MNMN17MN15MN2MN13MD3MIMN3MN2MN14MN5MN12MIMD25MN10MN14MN6MI3MD19MN32MN12MNMI3M3N3M3I2MIMIMN10MN4MIMI2MIMNM2I7MN10MN3MD2MI2MI27MN9MI3M2IMI11MNM3NDMD18M153H mismatches: 126 - insertions: 25 - deletions: 11
  • Echium amoenum

    Echium amoenum

    • Public DB hit
      GI:296802977
      GU237486
    • Hit length
      1,352 bp
    • E Value
      0E0
    • BLAST Score
      1,572.6 bits
    • Similarity
      88.04%
    • Coverage
      79.22%
    • Alignment (schematic)

      SEQ ID NO 1
      79.22% cov
      GU237486
      98.67% cov
    • Alignment Length
      1,346 bp
    • CIGAR string
      53H9MN7MD2MI7MN2MN5MN2MN6MNMN2MN5MN8MN8MN4MN12MN6MN4MN14MNMN3MN5MDMIN3MN8MN29MN3MN3M2N2MN2MN6M2N8M2N2MN8MN32MN2MN8MN11MN20MN4MN9MN9MN2MN3MIMD3MN2MI2MD8MN60MN8MNMN14MN14MN8MN17MN2MN2MIMD2MN2MN2MN14MN11MN13MN14MN53MN2MN8MN11MN5MN2MN11MN8MN3MI3MDMN11MN8MN2MI2M2NMD3MN14MN14M2N13MN9MN8MNMN16MN3MN23MN3MN14MN2MIMD3MN13MIMNDMN7MN12MN2MN11MN14MN8MN9MN4MN3MNMN2MN20MN2MN5MN8MN5MN2MN14MN14M2N7MN11MNIMD9MN11MN3MN38MNMN14MD3MI3MN4MN6MN16MD3MIM2N5MN14MN5MN3MN9MN6MN5M2N25MN2MN3MN17MNMN3MN16MN24MNMN10M297H mismatches: 137 - insertions: 12 - deletions: 12
  • Echium gentianoides

    Echium gentianoides

    • Public DB hit
      GI:17223794
      AY055117
    • Hit length
      1,478 bp
    • E Value
      0E0
    • BLAST Score
      1,524.6 bits
    • Similarity
      86.94%
    • Coverage
      81.06%
    • Alignment (schematic)

      SEQ ID NO 1
      81.06% cov
      AY055117
      92.35% cov
    • Alignment Length
      1,378 bp
    • CIGAR string
      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 mismatches: 154 - insertions: 13 - deletions: 13
  • Echium pitardii var. pitardii

    Echium pitardii var. pitardii

    • Public DB hit
      GI:17223796
      AY055118
      1 of 3 hits reported for Echium pitardii var. pitardii.
    • Hit length
      1,450 bp
    • E Value
      0E0
    • BLAST Score
      1,452.6 bits
    • Similarity
      86.22%
    • Coverage
      80.17%
    • Alignment (schematic)

      SEQ ID NO 1
      80.17% cov
      AY055118
      93.1% cov
    • Alignment Length
      1,364 bp
    • CIGAR string
      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 mismatches: 160 - insertions: 14 - deletions: 14
  • Echium plantagineum

    Echium plantagineum

    • Public DB hit
      GI:70795232
      AY952780
    • Hit length
      1,814 bp
    • E Value
      0E0
    • BLAST Score
      1,450.7 bits
    • Similarity
      84.77%
    • Coverage
      86.82%
    • Alignment (schematic)

      SEQ ID NO 1
      86.82% cov
      AY952780
      80.71% cov
    • Alignment Length
      1,484 bp
    • CIGAR string
      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 mismatches: 184 - insertions: 22 - deletions: 20
  • Echium sabulicola

    Echium sabulicola

    • Public DB hit
      GI:71068110
      DQ067612
    • Hit length
      1,455 bp
    • E Value
      0E0
    • BLAST Score
      1,388 bits
    • Similarity
      85.56%
    • Coverage
      79.33%
    • Alignment (schematic)

      SEQ ID NO 1
      79.33% cov
      DQ067612
      91.82% cov
    • Alignment Length
      1,350 bp
    • CIGAR string
      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 mismatches: 167 - insertions: 14 - deletions: 14
  • Solanum lycopersicum

    Solanum lycopersicum

    • Public DB hit
      GI:152956199
      CU457765
      1 of 2 hits reported for Solanum lycopersicum.
    • Hit length
      133,977 bp
    • E Value
      0E0
    • BLAST Score
      743.5 bits
    • Similarity
      77.44%
    • Coverage
      79.1%
    • Alignment (schematic)

      SEQ ID NO 1
      79.1% cov
      CU457765
      0.99% cov
    • Alignment Length
      1,374 bp
    • CIGAR string
      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 mismatches: 227 - insertions: 42 - deletions: 41
  • Ricinus communis

    Ricinus communis

    • Public DB hit
      GI:255550763
      XM_002516384
    • Hit length
      2,026 bp
    • E Value
      1.88E-153
    • BLAST Score
      553.3 bits
    • Similarity
      75.04%
    • Coverage
      78.86%
    • Alignment (schematic)

      SEQ ID NO 1
      78.86% cov
      XM_002516384
      65.55% cov
    • Alignment Length
      1,374 bp
    • CIGAR string
      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 mismatches: 251 - insertions: 46 - deletions: 46
Occurrence
6 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
448
Type
peptide
Locations
Undetermined

Declared organism:
Borago officinalis

Determined organism:
  • Borago officinalis

    Borago officinalis

    • Public DB hit
      GI:4102021
      AAD01410
      1 of 2 hits reported for Borago officinalis.
    • Hit length
      448 aa
    • E Value
      0E0
    • BLAST Score
      936.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      AAD01410
      100% cov
    • Alignment Length
      448 aa
    • CIGAR string
      448M mismatches: 0 - insertions: 0 - deletions: 0
  • Argania spinosa

    Argania spinosa

    • Public DB hit
      GI:22296826
      AAM94345
    • Hit length
      448 aa
    • E Value
      0E0
    • BLAST Score
      906 bits
    • Similarity
      97.1%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      AAM94345
      100% cov
    • Alignment Length
      448 aa
    • CIGAR string
      27MN10MN54MN14MN23MN27MN30MN46MN16MN27MN57MN6MN39MN59M mismatches: 13 - insertions: 0 - deletions: 0
  • Nonea caspica

    Nonea caspica

    • Public DB hit
      GI:89077589
      ABD60318
    • Hit length
      448 aa
    • E Value
      0E0
    • BLAST Score
      860.5 bits
    • Similarity
      95.09%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      ABD60318
      100% cov
    • Alignment Length
      448 aa
  • Echium amoenum

    Echium amoenum

    • Public DB hit
      GI:296802978
      ADA68870
    • Hit length
      448 aa
    • E Value
      0E0
    • BLAST Score
      829.7 bits
    • Similarity
      93.97%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      ADA68870
      100% cov
    • Alignment Length
      448 aa
  • Echium sabulicola

    Echium sabulicola

    • Public DB hit
      GI:71068111
      AAZ23035
    • Hit length
      448 aa
    • E Value
      0E0
    • BLAST Score
      817.8 bits
    • Similarity
      93.75%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      AAZ23035
      100% cov
    • Alignment Length
      448 aa
  • Echium plantagineum

    Echium plantagineum

    • Public DB hit
      GI:70795233
      AAZ08559
    • Hit length
      448 aa
    • E Value
      0E0
    • BLAST Score
      816.2 bits
    • Similarity
      93.53%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      AAZ08559
      100% cov
    • Alignment Length
      448 aa
  • Echium gentianoides

    Echium gentianoides

    • Public DB hit
      GI:17223795
      AAL23580
    • Hit length
      448 aa
    • E Value
      0E0
    • BLAST Score
      815.5 bits
    • Similarity
      93.3%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      AAL23580
      100% cov
    • Alignment Length
      448 aa
  • Echium pitardii var. pitardii

    Echium pitardii var. pitardii

    • Public DB hit
      GI:17223797
      AAL23581
      1 of 2 hits reported for Echium pitardii var. pitardii.
    • Hit length
      448 aa
    • E Value
      0E0
    • BLAST Score
      807.7 bits
    • Similarity
      93.3%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      AAL23581
      100% cov
    • Alignment Length
      448 aa
  • Nicotiana tabacum

    Nicotiana tabacum

    • Public DB hit
      GI:129593742
      ABO31111
    • Hit length
      447 aa
    • E Value
      0E0
    • BLAST Score
      721.1 bits
    • Similarity
      86.55%
    • Coverage
      99.55%
    • Alignment (schematic)

      SEQ ID NO 2
      99.55% cov
      ABO31111
      99.78% cov
    • Alignment Length
      446 aa
  • Ricinus communis

    Ricinus communis

    • Public DB hit
      GI:255550764
      XP_002516430
      1 of 2 hits reported for Ricinus communis.
    • Hit length
      447 aa
    • E Value
      0E0
    • BLAST Score
      681 bits
    • Similarity
      82.74%
    • Coverage
      99.55%
    • Alignment (schematic)

      SEQ ID NO 2
      99.55% cov
      XP_002516430
      99.78% cov
    • Alignment Length
      446 aa
  • Vitis vinifera

    Vitis vinifera

    • Public DB hit
      GI:225429536
      XP_002279189
    • Hit length
      447 aa
    • E Value
      0E0
    • BLAST Score
      674.5 bits
    • Similarity
      82.51%
    • Coverage
      99.55%
    • Alignment (schematic)

      SEQ ID NO 2
      99.55% cov
      XP_002279189
      99.78% cov
    • Alignment Length
      446 aa
  • Populus trichocarpa

    Populus trichocarpa

    • Public DB hit
      GI:224088826
      XP_002308556
    • Hit length
      448 aa
    • E Value
      0E0
    • BLAST Score
      674.1 bits
    • Similarity
      82.55%
    • Coverage
      99.55%
    • Alignment (schematic)

      SEQ ID NO 2
      99.55% cov
      XP_002308556
      99.78% cov
    • Alignment Length
      447 aa
  • Camellia oleifera

    Camellia oleifera

    • Public DB hit
      GI:289552249
      ADD10720
    • Hit length
      448 aa
    • E Value
      0E0
    • BLAST Score
      672.9 bits
    • Similarity
      82.59%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      ADD10720
      100% cov
    • Alignment Length
      448 aa
  • Jatropha curcas

    Jatropha curcas

    • Public DB hit
      GI:144583293
      ABP01349
    • Hit length
      447 aa
    • E Value
      0E0
    • BLAST Score
      670.6 bits
    • Similarity
      83.18%
    • Coverage
      99.55%
    • Alignment (schematic)

      SEQ ID NO 2
      99.55% cov
      ABP01349
      99.78% cov
    • Alignment Length
      446 aa
  • Camellia sinensis

    Camellia sinensis

    • Public DB hit
      GI:37727301
      AAO13090
    • Hit length
      448 aa
    • E Value
      0E0
    • BLAST Score
      656 bits
    • Similarity
      81.7%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      AAO13090
      100% cov
    • Alignment Length
      448 aa
  • Oenothera biennis

    Oenothera biennis

    • Public DB hit
      GI:171673207
      ACB47482
    • Hit length
      447 aa
    • E Value
      0E0
    • BLAST Score
      641.7 bits
    • Similarity
      81.17%
    • Coverage
      99.55%
    • Alignment (schematic)

      SEQ ID NO 2
      99.55% cov
      ACB47482
      99.78% cov
    • Alignment Length
      446 aa
  • Aquilegia vulgaris

    Aquilegia vulgaris

    • Public DB hit
      GI:22652111
      AAN03619
    • Hit length
      446 aa
    • E Value
      0E0
    • BLAST Score
      639.8 bits
    • Similarity
      81.04%
    • Coverage
      98.88%
    • Alignment (schematic)

      SEQ ID NO 2
      98.88% cov
      AAN03619
      99.1% cov
    • Alignment Length
      443 aa
  • Ribes nigrum

    Ribes nigrum

    • Public DB hit
      GI:281323253
      ADA60228
    • Hit length
      448 aa
    • E Value
      7.77E-180
    • BLAST Score
      635.6 bits
    • Similarity
      79.46%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      ADA60228
      100% cov
    • Alignment Length
      448 aa
  • Primula vialii

    Primula vialii

    • Public DB hit
      GI:30350281
      AAP23036
    • Hit length
      453 aa
    • E Value
      4.52E-178
    • BLAST Score
      629.4 bits
    • Similarity
      78.23%
    • Coverage
      98.44%
    • Alignment (schematic)

      SEQ ID NO 2
      98.44% cov
      AAP23036
      97.35% cov
    • Alignment Length
      441 aa
Occurrence
155 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
3
Length
834
Type
DNA
Locations
Undetermined

Declared organism:
Arabidopsis thaliana

Determined organism:
  • Arabidopsis thaliana

    Arabidopsis thaliana

    • Public DB hit
      GI:145339007
      NM_113682
      1 of 9 hits reported for Arabidopsis thaliana.
    • Hit length
      874 bp
    • E Value
      0E0
    • BLAST Score
      1,437.8 bits
    • Similarity
      99.87%
    • Coverage
      93.65%
    • Alignment (schematic)

      SEQ ID NO 3
      93.65% cov
      NM_113682
      89.36% cov
    • Alignment Length
      781 bp
    • CIGAR string
      27H32MN748M26H mismatches: 1 - insertions: 0 - deletions: 0
  • Arabidopsis lyrata

    Arabidopsis lyrata

    • Public DB hit
      GI:256419043
      AC237336
    • Hit length
      39,159 bp
    • E Value
      0E0
    • BLAST Score
      898.6 bits
    • Similarity
      92.34%
    • Coverage
      75.9%
    • Alignment (schematic)

      SEQ ID NO 3
      75.9% cov
      AC237336
      1.62% cov
    • Alignment Length
      640 bp
    • CIGAR string
      183H47MN8MN14MN53MN2MN17MN2MN32MN9MN31MN17MN29MN5MN53MN29MN16M2N32MDMD13MI7MNM2N5MN8MN5MNMD3MIMD33M2IM3I15MDMD8MN17MN12MN6MN11MN12MN4MN4MNMN9MN4MN2MN3MN7M18H mismatches: 36 - insertions: 7 - deletions: 6
  • Arabidopsis lyrata subsp. lyrata

    Arabidopsis lyrata subsp. lyrata

    • Public DB hit
      GI:297815023
      XM_002875349
    • Hit length
      697 bp
    • E Value
      0E0
    • BLAST Score
      863.5 bits
    • Similarity
      93.54%
    • Coverage
      70.14%
    • Alignment (schematic)

      SEQ ID NO 3
      70.14% cov
      XM_002875349
      82.78% cov
    • Alignment Length
      588 bp
    • CIGAR string
      27H14MN2MN14MN29M3I7M2N15MN2MD3M2D3M3DM3D22MN75MN8MN14MN53MN2MN17MN2MN32MN9MN31MN17MN29MN5MN53MN29MN16M2N32MDMD13M222H mismatches: 24 - insertions: 3 - deletions: 11
  • Brassica napus

    Brassica napus

    • Public DB hit
      GI:196122061
      EU678258
      1 of 2 hits reported for Brassica napus.
    • Hit length
      731 bp
    • E Value
      1.17E-157
    • BLAST Score
      566.2 bits
    • Similarity
      82.21%
    • Coverage
      82.25%
    • Alignment (schematic)

      SEQ ID NO 3
      82.25% cov
      EU678258
      91.66% cov
    • Alignment Length
      697 bp
    • CIGAR string
      52H7MN2MN2MN4M2N11M2N4M3I6M2NMN7MN11MN4M3D3M3D10MNMN2MN7MN6MN12MN10MN12MN10MN8MN8MN2MN22MN2MN5MN2MN3MNMDMI4M2NMN2MN20MN2MN2MN8MN3MN4MN2MN5MN8MNMN15MN9MN10MN11MN8MN26MN2MN2MN14MN5MN2MN11MN2MN14MINMD30MN8MN5MN2MNMN3MN3MD3MIMNM2N9MIMD6MN2MN3MNMN5MDMDMN2M4DMDMD2MD3MN6M2N2MN6MNMDMI4MNMD4MN9M2N14MD3MDMNMDMD4M2D3MI4MN4M2I6MN5MN7MN4MN7M96H mismatches: 86 - insertions: 11 - deletions: 27
Occurrence
2 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
4
Length
191
Type
peptide
Locations
Undetermined

Declared organism:
Arabidopsis thaliana

Determined organism:
  • Arabidopsis thaliana

    Arabidopsis thaliana

    • Public DB hit
      GI:15232227
      NP_189403
      1 of 6 hits reported for Arabidopsis thaliana.
    • Hit length
      191 aa
    • E Value
      2.46E-105
    • BLAST Score
      385.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NP_189403
      100% cov
    • Alignment Length
      191 aa
    • CIGAR string
      191M mismatches: 0 - insertions: 0 - deletions: 0
  • Arabidopsis lyrata subsp. lyrata

    Arabidopsis lyrata subsp. lyrata

    • Public DB hit
      GI:297815024
      XP_002875395
      1 of 3 hits reported for Arabidopsis lyrata subsp. lyrata.
    • Hit length
      190 aa
    • E Value
      6.09E-82
    • BLAST Score
      307.8 bits
    • Similarity
      97.37%
    • Coverage
      98.95%
    • Alignment (schematic)

      SEQ ID NO 4
      98.95% cov
      XP_002875395
      98.42% cov
    • Alignment Length
      190 aa
  • Brassica napus

    Brassica napus

    • Public DB hit
      GI:257096654
      C3S7F1
      1 of 5 hits reported for Brassica napus.
    • Hit length
      188 aa
    • E Value
      1.6E-69
    • BLAST Score
      266.5 bits
    • Similarity
      86.32%
    • Coverage
      98.95%
    • Alignment (schematic)

      SEQ ID NO 4
      98.95% cov
      C3S7F1
      98.94% cov
    • Alignment Length
      190 aa
Occurrence
103 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
5
Length
191
Type
peptide
Locations
Undetermined

Declared organism:
Arabidopsis thaliana

Occurrence
5 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
6
Length
191
Type
peptide
Locations
Undetermined

Declared organism:
Arabidopsis thaliana

Occurrence
5 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
7
Length
78
Type
peptide
Locations
Undetermined

Declared organism:
Arabidopsis thaliana

Determined organism:
  • Arabidopsis thaliana

    Arabidopsis thaliana

    • Public DB hit
      GI:15232227
      NP_189403
      1 of 5 hits reported for Arabidopsis thaliana.
    • Hit length
      191 aa
    • E Value
      8.72E-34
    • BLAST Score
      147.5 bits
    • Similarity
      92.31%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NP_189403
      40.84% cov
    • Alignment Length
      78 aa
    • CIGAR string
      13M6N7MN51M mismatches: 7 - insertions: 0 - deletions: 0
  • Brassica napus

    Brassica napus

    • Public DB hit
      GI:257096654
      C3S7F1
      1 of 6 hits reported for Brassica napus.
    • Hit length
      188 aa
    • E Value
      2.78E-27
    • BLAST Score
      125.9 bits
    • Similarity
      82.89%
    • Coverage
      97.44%
    • Alignment (schematic)

      SEQ ID NO 7
      97.44% cov
      C3S7F1
      40.43% cov
    • Alignment Length
      76 aa
  • Arabidopsis lyrata subsp. lyrata

    Arabidopsis lyrata subsp. lyrata

    • Public DB hit
      GI:297815024
      XP_002875395
      1 of 2 hits reported for Arabidopsis lyrata subsp. lyrata.
    • Hit length
      190 aa
    • E Value
      2.38E-25
    • BLAST Score
      119.4 bits
    • Similarity
      90.79%
    • Coverage
      97.44%
    • Alignment (schematic)

      SEQ ID NO 7
      97.44% cov
      XP_002875395
      40% cov
    • Alignment Length
      76 aa
Occurrence
4 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
8
Length
173
Type
peptide
Locations
Undetermined

Declared organism:
Arabidopsis thaliana

Determined organism:
  • Arabidopsis thaliana

    Arabidopsis thaliana

    • Public DB hit
      GI:15234945
      NP_194244
    • Hit length
      173 aa
    • E Value
      2.76E-94
    • BLAST Score
      348.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NP_194244
      100% cov
    • Alignment Length
      173 aa
    • CIGAR string
      173M mismatches: 0 - insertions: 0 - deletions: 0
  • Arabidopsis lyrata subsp. lyrata

    Arabidopsis lyrata subsp. lyrata

    • Public DB hit
      GI:297803608
      XP_002869688
    • Hit length
      173 aa
    • E Value
      3.16E-84
    • BLAST Score
      315.1 bits
    • Similarity
      98.27%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XP_002869688
      100% cov
    • Alignment Length
      173 aa
    • CIGAR string
      4MNMN13MN108MN37MN5M mismatches: 5 - insertions: 0 - deletions: 0
  • Brassica napus

    Brassica napus

    • Public DB hit
      GI:129082
      P29110
      1 of 12 hits reported for Brassica napus.
    • Hit length
      195 aa
    • E Value
      3.2E-73
    • BLAST Score
      278.5 bits
    • Similarity
      83.67%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      P29110
      100% cov
    • Alignment Length
      196 aa
    • CIGAR string
      MN4MD5M2N5M7IMN7MNMN2M8IMN11MN46MN57M8I17MN4M mismatches: 10 - insertions: 23 - deletions: 1
  • Brassica rapa subsp. oleifera

    Brassica rapa subsp. oleifera

    • Public DB hit
      GI:58294196
      AAW70038
    • Hit length
      178 aa
    • E Value
      2.62E-66
    • BLAST Score
      255.4 bits
    • Similarity
      89.82%
    • Coverage
      91.91%
    • Alignment (schematic)

      SEQ ID NO 8
      91.91% cov
      AAW70038
      92.7% cov
    • Alignment Length
      167 aa
  • Ficus pumila var. awkeotsang

    Ficus pumila var. awkeotsang

    • Public DB hit
      GI:148283923
      ABQ57397
    • Hit length
      153 aa
    • E Value
      1.91E-43
    • BLAST Score
      179.5 bits
    • Similarity
      87.5%
    • Coverage
      69.36%
    • Alignment (schematic)

      SEQ ID NO 8
      69.36% cov
      ABQ57397
      78.43% cov
    • Alignment Length
      120 aa
  • Citrus sinensis

    Citrus sinensis

    • Public DB hit
      GI:683553
      CAA88360
    • Hit length
      144 aa
    • E Value
      2.89E-43
    • BLAST Score
      179.1 bits
    • Similarity
      76.06%
    • Coverage
      82.08%
    • Alignment (schematic)

      SEQ ID NO 8
      82.08% cov
      CAA88360
      98.61% cov
    • Alignment Length
      142 aa
  • Jatropha curcas

    Jatropha curcas

    • Public DB hit
      GI:166831525
      ABW90150
    • Hit length
      137 aa
    • E Value
      5.69E-42
    • BLAST Score
      174.5 bits
    • Similarity
      84.17%
    • Coverage
      69.36%
    • Alignment (schematic)

      SEQ ID NO 8
      69.36% cov
      ABW90150
      87.59% cov
    • Alignment Length
      120 aa
Occurrence
123 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
9
Length
141
Type
peptide
Locations
Undetermined

Declared organism:
Arabidopsis thaliana

Determined organism:
  • Arabidopsis thaliana

    Arabidopsis thaliana

    • Public DB hit
      GI:15241406
      NP_199934
      1 of 2 hits reported for Arabidopsis thaliana.
    • Hit length
      141 aa
    • E Value
      4.49E-75
    • BLAST Score
      284.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      NP_199934
      100% cov
    • Alignment Length
      141 aa
    • CIGAR string
      141M mismatches: 0 - insertions: 0 - deletions: 0
  • Arabidopsis lyrata subsp. lyrata

    Arabidopsis lyrata subsp. lyrata

    • Public DB hit
      GI:297792435
      XP_002864102
    • Hit length
      141 aa
    • E Value
      3.47E-71
    • BLAST Score
      271.6 bits
    • Similarity
      97.87%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XP_002864102
      100% cov
    • Alignment Length
      141 aa
    • CIGAR string
      8MN10MN3MN49MN25MN3MN5MN29MNM mismatches: 8 - insertions: 0 - deletions: 0
  • Brassica napus

    Brassica napus

    • Public DB hit
      GI:196122072
      ACG69511
      1 of 3 hits reported for Brassica napus.
    • Hit length
      149 aa
    • E Value
      3.82E-55
    • BLAST Score
      218.4 bits
    • Similarity
      84.25%
    • Coverage
      98.58%
    • Alignment (schematic)

      SEQ ID NO 9
      98.58% cov
      ACG69511
      97.99% cov
    • Alignment Length
      146 aa
  • Citrus sinensis

    Citrus sinensis

    • Public DB hit
      GI:683553
      CAA88360
    • Hit length
      144 aa
    • E Value
      1.46E-37
    • BLAST Score
      159.8 bits
    • Similarity
      78.36%
    • Coverage
      89.36%
    • Alignment (schematic)

      SEQ ID NO 9
      89.36% cov
      CAA88360
      93.06% cov
    • Alignment Length
      134 aa
  • Brassica rapa subsp. oleifera

    Brassica rapa subsp. oleifera

    • Public DB hit
      GI:58294196
      AAW70038
    • Hit length
      178 aa
    • E Value
      1.97E-36
    • BLAST Score
      156.4 bits
    • Similarity
      75.17%
    • Coverage
      97.16%
    • Alignment (schematic)

      SEQ ID NO 9
      97.16% cov
      AAW70038
      81.46% cov
    • Alignment Length
      145 aa
  • Ficus pumila var. awkeotsang

    Ficus pumila var. awkeotsang

    • Public DB hit
      GI:148283923
      ABQ57397
    • Hit length
      153 aa
    • E Value
      3.65E-36
    • BLAST Score
      155.2 bits
    • Similarity
      80%
    • Coverage
      82.98%
    • Alignment (schematic)

      SEQ ID NO 9
      82.98% cov
      ABQ57397
      78.43% cov
    • Alignment Length
      120 aa
Occurrence
59 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
10
Length
199
Type
peptide
Locations
Undetermined

Declared organism:
Arabidopsis thaliana

Determined organism:
  • Arabidopsis thaliana

    Arabidopsis thaliana

    • Public DB hit
      GI:1107497
      CAA63022
      1 of 2 hits reported for Arabidopsis thaliana.
    • Hit length
      199 aa
    • E Value
      1.64E-95
    • BLAST Score
      353.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      CAA63022
      100% cov
    • Alignment Length
      199 aa
    • CIGAR string
      69MN11MN8MN9MN9MN88M mismatches: 5 - insertions: 0 - deletions: 0
  • Arabidopsis lyrata subsp. lyrata

    Arabidopsis lyrata subsp. lyrata

    • Public DB hit
      GI:297801534
      XP_002868651
      1 of 2 hits reported for Arabidopsis lyrata subsp. lyrata.
    • Hit length
      199 aa
    • E Value
      1.27E-87
    • BLAST Score
      327 bits
    • Similarity
      95.48%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XP_002868651
      100% cov
    • Alignment Length
      199 aa
    • CIGAR string
      10MN2MN10M3N4M2N36MN11MN8MN8M2N9MN23MN46MN12MN4M mismatches: 16 - insertions: 0 - deletions: 0
  • Brassica napus

    Brassica napus

    • Public DB hit
      GI:196122064
      ACG69507
      1 of 6 hits reported for Brassica napus.
    • Hit length
      210 aa
    • E Value
      3.19E-75
    • BLAST Score
      285.8 bits
    • Similarity
      85.24%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      ACG69507
      100% cov
    • Alignment Length
      210 aa
Occurrence
3 times in PatSeqDB
Tools
PatSeq Finder

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