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Search for Biological Sequences disclosed in Patents

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Data obtained from: DDBJ Pat NCBI GenBank USPTO Fulltext EMBL-EBI Pat
10 sequences found in this patent (in total)

Displaying 1 - 10 of 10 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
1,285
Type
DNA
Locations
Detailed Description, Drawings, Summary

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:2570924
      AF027150
      1 of 5 hits reported for Homo sapiens.
    • Hit length
      1,285 bp
    • E Value
      0E0
    • BLAST Score
      2,370.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      AF027150
      100% cov
    • Alignment Length
      1,285 bp
    • CIGAR string
      1285M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:114652750
      XM_509917
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      1,437 bp
    • E Value
      0E0
    • BLAST Score
      2,364.8 bits
    • Similarity
      99.84%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XM_509917
      89.42% cov
    • Alignment Length
      1,285 bp
    • CIGAR string
      24MN962MN297M mismatches: 2 - insertions: 0 - deletions: 0
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297297731
      XM_001092707
    • Hit length
      1,410 bp
    • E Value
      0E0
    • BLAST Score
      2,230 bits
    • Similarity
      97.91%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XM_001092707
      91.49% cov
    • Alignment Length
      1,292 bp
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332229193
      XM_003263729
    • Hit length
      1,338 bp
    • E Value
      0E0
    • BLAST Score
      2,067.5 bits
    • Similarity
      97.76%
    • Coverage
      93.54%
    • Alignment (schematic)

      SEQ ID NO 1
      93.54% cov
      XM_003263729
      89.54% cov
    • Alignment Length
      1,207 bp
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:335280201
      XM_003121777
      1 of 2 hits reported for Sus scrofa.
    • Hit length
      1,385 bp
    • E Value
      0E0
    • BLAST Score
      1,343.6 bits
    • Similarity
      90.36%
    • Coverage
      79.69%
    • Alignment (schematic)

      SEQ ID NO 1
      79.69% cov
      XM_003121777
      74.44% cov
    • Alignment Length
      1,037 bp
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301762158
      XM_002916453
    • Hit length
      1,009 bp
    • E Value
      0E0
    • BLAST Score
      1,306.7 bits
    • Similarity
      90.52%
    • Coverage
      77.43%
    • Alignment (schematic)

      SEQ ID NO 1
      77.43% cov
      XM_002916453
      98.12% cov
    • Alignment Length
      1,002 bp
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:194207315
      XM_001492973
    • Hit length
      846 bp
    • E Value
      0E0
    • BLAST Score
      1,258.7 bits
    • Similarity
      93.5%
    • Coverage
      65.84%
    • Alignment (schematic)

      SEQ ID NO 1
      65.84% cov
      XM_001492973
      100% cov
    • Alignment Length
      846 bp
Occurrence
22 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
280
Type
peptide
Locations
Claims, Detailed Description, Drawings, Summary

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:4506961
      NP_003607
      1 of 3 hits reported for Homo sapiens.
    • Hit length
      280 aa
    • E Value
      6.45E-162
    • BLAST Score
      574.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NP_003607
      100% cov
    • Alignment Length
      280 aa
    • CIGAR string
      280M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332229194
      XP_003263777
    • Hit length
      280 aa
    • E Value
      1.77E-160
    • BLAST Score
      570.1 bits
    • Similarity
      99.64%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_003263777
      100% cov
    • Alignment Length
      280 aa
    • CIGAR string
      2MN58MN92MN125M mismatches: 3 - insertions: 0 - deletions: 0
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:109083413
      XP_001092707
    • Hit length
      269 aa
    • E Value
      1.85E-155
    • BLAST Score
      553.5 bits
    • Similarity
      100%
    • Coverage
      96.07%
    • Alignment (schematic)

      SEQ ID NO 2
      96.07% cov
      XP_001092707
      100% cov
    • Alignment Length
      269 aa
    • CIGAR string
      11H269M mismatches: 0 - insertions: 0 - deletions: 0
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:149692932
      XP_001493023
    • Hit length
      280 aa
    • E Value
      7.97E-150
    • BLAST Score
      534.6 bits
    • Similarity
      98.57%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_001493023
      100% cov
    • Alignment Length
      280 aa
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:153792166
      NP_079932
      1 of 2 hits reported for Mus musculus.
    • Hit length
      269 aa
    • E Value
      1.84E-148
    • BLAST Score
      530 bits
    • Similarity
      97.4%
    • Coverage
      96.07%
    • Alignment (schematic)

      SEQ ID NO 2
      96.07% cov
      NP_079932
      100% cov
    • Alignment Length
      269 aa
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:311245421
      XP_003121825
    • Hit length
      281 aa
    • E Value
      3.49E-148
    • BLAST Score
      529.3 bits
    • Similarity
      98.22%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_003121825
      100% cov
    • Alignment Length
      281 aa
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301762159
      XP_002916499
    • Hit length
      269 aa
    • E Value
      5.96E-144
    • BLAST Score
      515 bits
    • Similarity
      98.88%
    • Coverage
      96.07%
    • Alignment (schematic)

      SEQ ID NO 2
      96.07% cov
      XP_002916499
      100% cov
    • Alignment Length
      269 aa
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:16758118
      NP_445841
    • Hit length
      269 aa
    • E Value
      1.03E-142
    • BLAST Score
      511.1 bits
    • Similarity
      98.14%
    • Coverage
      96.07%
    • Alignment (schematic)

      SEQ ID NO 2
      96.07% cov
      NP_445841
      100% cov
    • Alignment Length
      269 aa
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297694981
      XP_002824742
    • Hit length
      265 aa
    • E Value
      1.42E-142
    • BLAST Score
      510.4 bits
    • Similarity
      94.29%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_002824742
      100% cov
    • Alignment Length
      280 aa
  • Oryctolagus cuniculus

    Oryctolagus cuniculus

    • Public DB hit
      GI:291403772
      XP_002718198
    • Hit length
      281 aa
    • E Value
      1.43E-141
    • BLAST Score
      507.3 bits
    • Similarity
      95.73%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_002718198
      100% cov
    • Alignment Length
      281 aa
Occurrence
73 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
3
Length
1,631
Type
DNA
Locations
Detailed Description, Drawings, Summary

Declared organism:
Xenopus laevis

Determined organism:
  • Xenopus laevis

    Xenopus laevis

    • Public DB hit
      GI:2570926
      AF027151
      1 of 3 hits reported for Xenopus laevis.
    • Hit length
      1,631 bp
    • E Value
      0E0
    • BLAST Score
      2,643.7 bits
    • Similarity
      100%
    • Coverage
      97.67%
    • Alignment (schematic)

      SEQ ID NO 3
      97.67% cov
      AF027151
      97.67% cov
    • Alignment Length
      1,593 bp
    • CIGAR string
      1593M38H mismatches: 0 - insertions: 0 - deletions: 0
  • Xenopus (Silurana) tropicalis

    Xenopus (Silurana) tropicalis

    • Public DB hit
      GI:156717375
      NM_001102758
    • Hit length
      1,595 bp
    • E Value
      0E0
    • BLAST Score
      1,388 bits
    • Similarity
      87.95%
    • Coverage
      72.65%
    • Alignment (schematic)

      SEQ ID NO 3
      72.65% cov
      NM_001102758
      73.73% cov
    • Alignment Length
      1,203 bp
Occurrence
4 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
4
Length
259
Type
peptide
Locations
Detailed Description, Drawings, Summary

Declared organism:
Xenopus laevis

Determined organism:
  • Xenopus laevis

    Xenopus laevis

    • Public DB hit
      GI:6094290
      O42260
      1 of 3 hits reported for Xenopus laevis.
    • Hit length
      259 aa
    • E Value
      2.98E-149
    • BLAST Score
      532.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      O42260
      100% cov
    • Alignment Length
      259 aa
    • CIGAR string
      259M mismatches: 0 - insertions: 0 - deletions: 0
  • Xenopus (Silurana) tropicalis

    Xenopus (Silurana) tropicalis

    • Public DB hit
      GI:156717376
      NP_001096228
    • Hit length
      267 aa
    • E Value
      2.44E-144
    • BLAST Score
      516.2 bits
    • Similarity
      98.46%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NP_001096228
      97% cov
    • Alignment Length
      259 aa
    • CIGAR string
      7M2N6MN2MN50MN27MN41MN80MN9MN3MN24M mismatches: 10 - insertions: 0 - deletions: 0
  • Monodelphis domestica

    Monodelphis domestica

    • Public DB hit
      GI:334310415
      XP_001379128
    • Hit length
      264 aa
    • E Value
      2.98E-117
    • BLAST Score
      426.4 bits
    • Similarity
      91.34%
    • Coverage
      98.07%
    • Alignment (schematic)

      SEQ ID NO 4
      98.07% cov
      XP_001379128
      95.83% cov
    • Alignment Length
      254 aa
  • Gallus gallus

    Gallus gallus

    • Public DB hit
      GI:86129532
      NP_001034391
    • Hit length
      263 aa
    • E Value
      2.23E-116
    • BLAST Score
      423.3 bits
    • Similarity
      90.16%
    • Coverage
      98.07%
    • Alignment (schematic)

      SEQ ID NO 4
      98.07% cov
      NP_001034391
      95.82% cov
    • Alignment Length
      254 aa
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:12838764
      BAB24321
      1 of 2 hits reported for Mus musculus.
    • Hit length
      269 aa
    • E Value
      2.19E-114
    • BLAST Score
      416.8 bits
    • Similarity
      88.58%
    • Coverage
      98.07%
    • Alignment (schematic)

      SEQ ID NO 4
      98.07% cov
      BAB24321
      94.05% cov
    • Alignment Length
      254 aa
  • Taeniopygia guttata

    Taeniopygia guttata

    • Public DB hit
      GI:224051460
      XP_002200560
    • Hit length
      263 aa
    • E Value
      4.8E-114
    • BLAST Score
      415.6 bits
    • Similarity
      90.16%
    • Coverage
      98.07%
    • Alignment (schematic)

      SEQ ID NO 4
      98.07% cov
      XP_002200560
      95.82% cov
    • Alignment Length
      254 aa
  • Anolis carolinensis

    Anolis carolinensis

    • Public DB hit
      GI:327259226
      XP_003214439
    • Hit length
      263 aa
    • E Value
      6.99E-113
    • BLAST Score
      411.8 bits
    • Similarity
      89.76%
    • Coverage
      98.07%
    • Alignment (schematic)

      SEQ ID NO 4
      98.07% cov
      XP_003214439
      95.82% cov
    • Alignment Length
      254 aa
  • Ornithorhynchus anatinus

    Ornithorhynchus anatinus

    • Public DB hit
      GI:149410445
      XP_001513635
    • Hit length
      265 aa
    • E Value
      2.33E-109
    • BLAST Score
      399.8 bits
    • Similarity
      89.76%
    • Coverage
      98.07%
    • Alignment (schematic)

      SEQ ID NO 4
      98.07% cov
      XP_001513635
      95.47% cov
    • Alignment Length
      254 aa
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332229194
      XP_003263777
    • Hit length
      280 aa
    • E Value
      2.72E-109
    • BLAST Score
      399.8 bits
    • Similarity
      89.76%
    • Coverage
      98.07%
    • Alignment (schematic)

      SEQ ID NO 4
      98.07% cov
      XP_003263777
      90.36% cov
    • Alignment Length
      254 aa
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:4506961
      NP_003607
    • Hit length
      280 aa
    • E Value
      5.49E-109
    • BLAST Score
      398.7 bits
    • Similarity
      90.16%
    • Coverage
      98.07%
    • Alignment (schematic)

      SEQ ID NO 4
      98.07% cov
      NP_003607
      90.36% cov
    • Alignment Length
      254 aa
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:311245421
      XP_003121825
    • Hit length
      281 aa
    • E Value
      6.22E-109
    • BLAST Score
      398.7 bits
    • Similarity
      89.76%
    • Coverage
      98.07%
    • Alignment (schematic)

      SEQ ID NO 4
      98.07% cov
      XP_003121825
      90.39% cov
    • Alignment Length
      254 aa
Occurrence
3 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
6
Length
341
Type
peptide
Locations
Detailed Description, Drawings

Declared organism:
Saccharomyces cerevisiae

Determined organism:
  • Saccharomyces cerevisiae S288c

    Saccharomyces cerevisiae S288c

    • Public DB hit
      GI:6325314
      NP_015382
    • Hit length
      341 aa
    • E Value
      0E0
    • BLAST Score
      704.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NP_015382
      100% cov
    • Alignment Length
      341 aa
    • CIGAR string
      341M mismatches: 0 - insertions: 0 - deletions: 0
  • Saccharomyces cerevisiae JAY291

    Saccharomyces cerevisiae JAY291

    • Public DB hit
      GI:256268920
      EEU04267
    • Hit length
      341 aa
    • E Value
      0E0
    • BLAST Score
      703.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      EEU04267
      100% cov
    • Alignment Length
      341 aa
    • CIGAR string
      262MN78M mismatches: 1 - insertions: 0 - deletions: 0
  • Saccharomyces cerevisiae YJM789

    Saccharomyces cerevisiae YJM789

    • Public DB hit
      GI:151942842
      EDN61188
    • Hit length
      341 aa
    • E Value
      0E0
    • BLAST Score
      664.5 bits
    • Similarity
      99.12%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      EDN61188
      100% cov
    • Alignment Length
      341 aa
    • CIGAR string
      58MN42MN12MN4MN38MN12MN24MN24MN119M mismatches: 8 - insertions: 0 - deletions: 0
Occurrence
7 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
7
Length
3,152
Type
DNA
Locations
Detailed Description, Drawings, Summary

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:6503001
      AF171063
      1 of 10 hits reported for Homo sapiens.
    • Hit length
      3,152 bp
    • E Value
      0E0
    • BLAST Score
      5,821.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      AF171063
      100% cov
    • Alignment Length
      3,152 bp
    • CIGAR string
      3152M mismatches: 0 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297664085
      XM_002810435
    • Hit length
      3,506 bp
    • E Value
      0E0
    • BLAST Score
      5,282.5 bits
    • Similarity
      97.54%
    • Coverage
      98.03%
    • Alignment (schematic)

      SEQ ID NO 7
      98.03% cov
      XM_002810435
      88.05% cov
    • Alignment Length
      3,092 bp
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332237646
      XM_003267969
    • Hit length
      3,497 bp
    • E Value
      0E0
    • BLAST Score
      5,230.8 bits
    • Similarity
      97.89%
    • Coverage
      96%
    • Alignment (schematic)

      SEQ ID NO 7
      96% cov
      XM_003267969
      86.45% cov
    • Alignment Length
      3,028 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:123997546
      DQ895449
      1 of 2 hits reported for synthetic construct.
    • Hit length
      2,515 bp
    • E Value
      0E0
    • BLAST Score
      4,529.1 bits
    • Similarity
      99.68%
    • Coverage
      78.55%
    • Alignment (schematic)

      SEQ ID NO 7
      78.55% cov
      DQ895449
      98.45% cov
    • Alignment Length
      2,476 bp
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332810030
      XM_003308330
    • Hit length
      2,904 bp
    • E Value
      0E0
    • BLAST Score
      4,453.4 bits
    • Similarity
      98.05%
    • Coverage
      81.31%
    • Alignment (schematic)

      SEQ ID NO 7
      81.31% cov
      XM_003308330
      88.12% cov
    • Alignment Length
      2,565 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296208838
      XM_002751225
    • Hit length
      2,474 bp
    • E Value
      0E0
    • BLAST Score
      3,772 bits
    • Similarity
      94.18%
    • Coverage
      78.68%
    • Alignment (schematic)

      SEQ ID NO 7
      78.68% cov
      XM_002751225
      100% cov
    • Alignment Length
      2,490 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297279557
      XM_001106355
    • Hit length
      3,009 bp
    • E Value
      0E0
    • BLAST Score
      3,707.3 bits
    • Similarity
      96.14%
    • Coverage
      72.05%
    • Alignment (schematic)

      SEQ ID NO 7
      72.05% cov
      XM_001106355
      75.51% cov
    • Alignment Length
      2,279 bp
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:194210987
      XM_001498695
    • Hit length
      2,475 bp
    • E Value
      0E0
    • BLAST Score
      3,330.6 bits
    • Similarity
      91.01%
    • Coverage
      78.52%
    • Alignment (schematic)

      SEQ ID NO 7
      78.52% cov
      XM_001498695
      100% cov
    • Alignment Length
      2,492 bp
Occurrence
4 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
8
Length
824
Type
peptide
Locations
Detailed Description, Drawings, Summary

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:6503002
      AAF14544
      1 of 8 hits reported for Homo sapiens.
    • Hit length
      824 aa
    • E Value
      0E0
    • BLAST Score
      1,722.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      AAF14544
      100% cov
    • Alignment Length
      824 aa
    • CIGAR string
      824M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332237647
      XP_003268017
    • Hit length
      824 aa
    • E Value
      0E0
    • BLAST Score
      1,627.1 bits
    • Similarity
      98.42%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XP_003268017
      100% cov
    • Alignment Length
      824 aa
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297664086
      XP_002810481
    • Hit length
      824 aa
    • E Value
      0E0
    • BLAST Score
      1,625.9 bits
    • Similarity
      97.94%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XP_002810481
      100% cov
    • Alignment Length
      824 aa
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296208839
      XP_002751271
    • Hit length
      822 aa
    • E Value
      0E0
    • BLAST Score
      1,543.5 bits
    • Similarity
      95.68%
    • Coverage
      98.42%
    • Alignment (schematic)

      SEQ ID NO 8
      98.42% cov
      XP_002751271
      98.42% cov
    • Alignment Length
      811 aa
  • Oryctolagus cuniculus

    Oryctolagus cuniculus

    • Public DB hit
      GI:291398265
      XP_002715818
    • Hit length
      826 aa
    • E Value
      0E0
    • BLAST Score
      1,452.6 bits
    • Similarity
      93.59%
    • Coverage
      96.6%
    • Alignment (schematic)

      SEQ ID NO 8
      96.6% cov
      XP_002715818
      96.37% cov
    • Alignment Length
      796 aa
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:194210988
      XP_001498745
    • Hit length
      824 aa
    • E Value
      0E0
    • BLAST Score
      1,428.7 bits
    • Similarity
      92.73%
    • Coverage
      98.42%
    • Alignment (schematic)

      SEQ ID NO 8
      98.42% cov
      XP_001498745
      98.42% cov
    • Alignment Length
      811 aa
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:156120883
      NP_001095588
      1 of 2 hits reported for Bos taurus.
    • Hit length
      825 aa
    • E Value
      0E0
    • BLAST Score
      1,417.1 bits
    • Similarity
      91.91%
    • Coverage
      98.79%
    • Alignment (schematic)

      SEQ ID NO 8
      98.79% cov
      NP_001095588
      98.79% cov
    • Alignment Length
      816 aa
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301784208
      XP_002927519
    • Hit length
      823 aa
    • E Value
      0E0
    • BLAST Score
      1,411 bits
    • Similarity
      91.62%
    • Coverage
      98.42%
    • Alignment (schematic)

      SEQ ID NO 8
      98.42% cov
      XP_002927519
      98.42% cov
    • Alignment Length
      811 aa
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332810031
      XP_003308378
    • Hit length
      668 aa
    • E Value
      0E0
    • BLAST Score
      1,388.6 bits
    • Similarity
      98.95%
    • Coverage
      81.07%
    • Alignment (schematic)

      SEQ ID NO 8
      81.07% cov
      XP_003308378
      100% cov
    • Alignment Length
      668 aa
Occurrence
3 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
9
Length
797
Type
DNA
Locations
Detailed Description, Drawings, Summary

Declared organism:
Gallus gallus

Determined organism:
  • Gallus gallus

    Gallus gallus

    • Public DB hit
      GI:45383717
      NM_204199
    • Hit length
      795 bp
    • E Value
      0E0
    • BLAST Score
      1,469.2 bits
    • Similarity
      100%
    • Coverage
      99.75%
    • Alignment (schematic)

      SEQ ID NO 9
      99.75% cov
      NM_204199
      100% cov
    • Alignment Length
      795 bp
    • CIGAR string
      2H795M mismatches: 0 - insertions: 0 - deletions: 0
  • Meleagris gallopavo

    Meleagris gallopavo

    • Public DB hit
      GI:326935425
      XM_003213724
    • Hit length
      546 bp
    • E Value
      0E0
    • BLAST Score
      785.9 bits
    • Similarity
      92.46%
    • Coverage
      69.89%
    • Alignment (schematic)

      SEQ ID NO 9
      69.89% cov
      XM_003213724
      99.82% cov
    • Alignment Length
      557 bp
    • CIGAR string
      239H11MN44MN15MN4MN17MN26MN29MN20MD2MDM4DM4D2M2D42MN4MN2M2N22MN24MN17MN14MN29MN2MN6MNMN12MN47MN7MN8MN47MN5MN5MN8MN13M2N21MN7M1H mismatches: 30 - insertions: 0 - deletions: 12
  • Taeniopygia guttata

    Taeniopygia guttata

    • Public DB hit
      GI:224089751
      XM_002195038
    • Hit length
      1,152 bp
    • E Value
      0E0
    • BLAST Score
      723.2 bits
    • Similarity
      83.77%
    • Coverage
      97.49%
    • Alignment (schematic)

      SEQ ID NO 9
      97.49% cov
      XM_002195038
      68.75% cov
    • Alignment Length
      807 bp
    • CIGAR string
      2H7MNMDMI20MD4MI20MN59MN8MN5M3N3MN2MN5MN5MN6M2DMNMN2MDMN5MI4MIM2I3M2I2MN2MD2MI2M2INMI2MN2MN3MIM2IMI2MIMI4MN4M2NMNMN3MN5MN8MN5MN8MNM2N21MN2MNMN2MDN2MI17MN2MNMN6MN2MN5MN5MN8MN11MIMD4MD3MI5M2N2MN17MNMN2MN7MN18MN29MN7MN2MIMD2M2N25MN2MN3MI5MD2MIMDMN3MI2MI2MNMI6MN2MI2MD5MN2M2N5MIMD3MN10MIMND3MN4MN4MN2MN14MN5MN14MN2MN17MN3MN7MN3MN7MN8MN20MN5MN11MN20MN11MN14M2NMN6M18H mismatches: 86 - insertions: 30 - deletions: 15
Occurrence
4 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
10
Length
264
Type
peptide
Locations
Detailed Description, Drawings, Summary

Declared organism:
Gallus gallus

Determined organism:
  • Gallus gallus

    Gallus gallus

    • Public DB hit
      GI:45383718
      NP_989530
    • Hit length
      264 aa
    • E Value
      2.76E-154
    • BLAST Score
      549.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      NP_989530
      100% cov
    • Alignment Length
      264 aa
    • CIGAR string
      264M mismatches: 0 - insertions: 0 - deletions: 0
  • Taeniopygia guttata

    Taeniopygia guttata

    • Public DB hit
      GI:224089752
      XP_002195074
    • Hit length
      269 aa
    • E Value
      1.92E-106
    • BLAST Score
      390.2 bits
    • Similarity
      86.62%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XP_002195074
      100% cov
    • Alignment Length
      269 aa
    • CIGAR string
      2M2N14MN24M2N8M5N3M6N4MNMN4IN11MN7M2NMN7MN14MNMN3MN5MN3MN18M2NMN10M2N3M2N2MNMI3MNMN4M3NMN22MN3MN37M4NM mismatches: 49 - insertions: 5 - deletions: 0
  • Meleagris gallopavo

    Meleagris gallopavo

    • Public DB hit
      GI:326935426
      XP_003213772
    • Hit length
      181 aa
    • E Value
      2.15E-82
    • BLAST Score
      310.5 bits
    • Similarity
      93.51%
    • Coverage
      70.08%
    • Alignment (schematic)

      SEQ ID NO 10
      70.08% cov
      XP_003213772
      100% cov
    • Alignment Length
      185 aa
    • CIGAR string
      79H24MN33M4D2N13MNM2N7MN32MN4MN15MN32MN9M mismatches: 11 - insertions: 0 - deletions: 4
  • Anolis carolinensis

    Anolis carolinensis

    • Public DB hit
      GI:327263132
      XP_003216375
    • Hit length
      303 aa
    • E Value
      4.73E-75
    • BLAST Score
      286.2 bits
    • Similarity
      77.78%
    • Coverage
      98.48%
    • Alignment (schematic)

      SEQ ID NO 10
      98.48% cov
      XP_003216375
      88.12% cov
    • Alignment Length
      270 aa
  • Ornithorhynchus anatinus

    Ornithorhynchus anatinus

    • Public DB hit
      GI:149408527
      XP_001512480
    • Hit length
      286 aa
    • E Value
      2.13E-70
    • BLAST Score
      270.8 bits
    • Similarity
      77.49%
    • Coverage
      95.08%
    • Alignment (schematic)

      SEQ ID NO 10
      95.08% cov
      XP_001512480
      94.76% cov
    • Alignment Length
      271 aa
Occurrence
4 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
11
Length
407
Type
peptide
Locations
Undetermined

Declared organism:
Homo sapiens

Determined organism:
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:56605748
      NP_001008336
    • Hit length
      407 aa
    • E Value
      0E0
    • BLAST Score
      844.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 11
      100% cov
      NP_001008336
      100% cov
    • Alignment Length
      407 aa
    • CIGAR string
      407M mismatches: 0 - insertions: 0 - deletions: 0
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:16198386
      AAH15842
      1 of 2 hits reported for Homo sapiens.
    • Hit length
      407 aa
    • E Value
      0E0
    • BLAST Score
      842.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 11
      100% cov
      AAH15842
      100% cov
    • Alignment Length
      407 aa
    • CIGAR string
      26MN380M mismatches: 1 - insertions: 0 - deletions: 0
  • Macaca fascicularis

    Macaca fascicularis

    • Public DB hit
      GI:90081060
      BAE90010
      1 of 2 hits reported for Macaca fascicularis.
    • Hit length
      407 aa
    • E Value
      0E0
    • BLAST Score
      842 bits
    • Similarity
      99.75%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 11
      100% cov
      BAE90010
      100% cov
    • Alignment Length
      407 aa
    • CIGAR string
      236MN170M mismatches: 1 - insertions: 0 - deletions: 0
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:85792253
      ABC84194
    • Hit length
      407 aa
    • E Value
      0E0
    • BLAST Score
      840.9 bits
    • Similarity
      99.75%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 11
      100% cov
      ABC84194
      100% cov
    • Alignment Length
      407 aa
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332215079
      XP_003256667
    • Hit length
      407 aa
    • E Value
      0E0
    • BLAST Score
      836.3 bits
    • Similarity
      99.51%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 11
      100% cov
      XP_003256667
      100% cov
    • Alignment Length
      407 aa
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:281350720
      EFB26304
    • Hit length
      399 aa
    • E Value
      0E0
    • BLAST Score
      825.5 bits
    • Similarity
      100%
    • Coverage
      98.03%
    • Alignment (schematic)

      SEQ ID NO 11
      98.03% cov
      EFB26304
      100% cov
    • Alignment Length
      399 aa
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:50823
      CAA31025
      1 of 4 hits reported for Mus musculus.
    • Hit length
      407 aa
    • E Value
      0E0
    • BLAST Score
      822.4 bits
    • Similarity
      98.28%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 11
      100% cov
      CAA31025
      100% cov
    • Alignment Length
      407 aa
  • Taeniopygia guttata

    Taeniopygia guttata

    • Public DB hit
      GI:224060745
      XP_002196090
    • Hit length
      407 aa
    • E Value
      0E0
    • BLAST Score
      797.7 bits
    • Similarity
      99.51%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 11
      100% cov
      XP_002196090
      100% cov
    • Alignment Length
      407 aa
  • Gallus gallus

    Gallus gallus

    • Public DB hit
      GI:45383077
      NP_989880
    • Hit length
      407 aa
    • E Value
      0E0
    • BLAST Score
      797.3 bits
    • Similarity
      99.51%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 11
      100% cov
      NP_989880
      100% cov
    • Alignment Length
      407 aa
  • Anolis carolinensis

    Anolis carolinensis

    • Public DB hit
      GI:327282024
      XP_003225744
    • Hit length
      406 aa
    • E Value
      0E0
    • BLAST Score
      793.9 bits
    • Similarity
      99.26%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 11
      100% cov
      XP_003225744
      100% cov
    • Alignment Length
      407 aa
  • Xenopus laevis

    Xenopus laevis

    • Public DB hit
      GI:2370593
      CAA73168
    • Hit length
      413 aa
    • E Value
      0E0
    • BLAST Score
      761.9 bits
    • Similarity
      96.98%
    • Coverage
      97.3%
    • Alignment (schematic)

      SEQ ID NO 11
      97.3% cov
      CAA73168
      96.13% cov
    • Alignment Length
      397 aa
  • Monodelphis domestica

    Monodelphis domestica

    • Public DB hit
      GI:334347344
      XP_001370190
    • Hit length
      404 aa
    • E Value
      0E0
    • BLAST Score
      751.1 bits
    • Similarity
      95.58%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 11
      100% cov
      XP_001370190
      100% cov
    • Alignment Length
      407 aa
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:74003456
      XP_860391
    • Hit length
      360 aa
    • E Value
      0E0
    • BLAST Score
      748.8 bits
    • Similarity
      100%
    • Coverage
      88.45%
    • Alignment (schematic)

      SEQ ID NO 11
      88.45% cov
      XP_860391
      100% cov
    • Alignment Length
      360 aa
Occurrence
99 times in PatSeqDB
Tools
PatSeq Finder

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