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Search for Biological Sequences disclosed in Patents

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Data obtained from: DDBJ Pat NCBI GenBank (EBI) WIPO-PCT EMBL-EBI Pat EPO Sequence Listings
816 sequences found in this patent (in total)

Displaying 1 - 10 of 816 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
58,199
Type
DNA
Locations
Claims, Fulltext

Declared organism:
Enterobacteria phage f1

Determined organism:
  • Enterococcus phage F4

    Enterococcus phage F4

    • Public DB hit
      GI:153799362
      EF653452
      1 of 2 hits reported for Enterococcus phage F4.
    • Hit length
      898 bp
    • E Value
      0E0
    • BLAST Score
      1,367.6 bits
    • Similarity
      94.4%
    • Coverage
      1.53%
    • Alignment (schematic)

      SEQ ID NO 1
      1.53% cov
      EF653452
      99.11% cov
    • Alignment Length
      893 bp
    • CIGAR string
      51194H5MN74MN17MN23MN62MN30MNMN5MN5MN14MN5MN11MN11MN8MN65MN29MD3MN2MI68MN38MN5MN5MN8MN5MN2MN2MN8MN35MN20MN35MN5MN23MN2MN8MN8MN77MN39MN16MN20MI2MD6MN8MN8MN2MN2MN2MN3MNMN2MN4MD4M6114H mismatches: 45 - insertions: 2 - deletions: 3
  • Enterococcus phage phiEF24C

    Enterococcus phage phiEF24C

    • Public DB hit
      GI:157890140
      AP009390
    • Hit length
      142,072 bp
    • E Value
      0E0
    • BLAST Score
      1,096.2 bits
    • Similarity
      89.5%
    • Coverage
      1.49%
    • Alignment (schematic)

      SEQ ID NO 1
      1.49% cov
      AP009390
      0.61% cov
    • Alignment Length
      876 bp
    • CIGAR string
      4097H78MN9MN2MNMN37MN6MN4MN8MNMN13MN17M2N2MIMD6MN20MN2M2N13MN6M2N8MN3MDMI22M2N2MN13MN32MN2MN8M2N8MN4MN18M2N6MN38MN10MD4M2NMN27MN8MD18MNMN5M2N16M2N13MN8MN5MN5MN20M2N8M3N5MN11MN6MNMN11MN15MD2MI16MN14MN4MN4MNMN2MDMI5MI3MNM3N2MND11M2N10MN76MNMN3MN9MN4MN7MN8MN3MN2MI6M53232H mismatches: 79 - insertions: 6 - deletions: 7
Occurrence
14 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
139,885
Type
DNA
Locations
Claims, Fulltext

Declared organism:
Enterobacteria phage f1

Determined organism:
  • Enterococcus phage phiEF24C

    Enterococcus phage phiEF24C

    • Public DB hit
      GI:158079296
      NC_009904
      1 of 2 hits reported for Enterococcus phage phiEF24C.
    • Hit length
      142,072 bp
    • E Value
      0E0
    • BLAST Score
      52,894.7 bits
    • Similarity
      98.46%
    • Coverage
      21.47%
    • Alignment (schematic)

      SEQ ID NO 2
      21.47% cov
      NC_009904
      21.14% cov
    • Alignment Length
      30,049 bp
  • Enterococcus phage phiEF24C-P2

    Enterococcus phage phiEF24C-P2

    • Public DB hit
      GI:353351569
      AB609718
    • Hit length
      142,072 bp
    • E Value
      0E0
    • BLAST Score
      52,894.7 bits
    • Similarity
      98.46%
    • Coverage
      21.47%
    • Alignment (schematic)

      SEQ ID NO 2
      21.47% cov
      AB609718
      21.14% cov
    • Alignment Length
      30,049 bp
Occurrence
14 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
3
Length
72,177
Type
DNA
Locations
Claims, Fulltext

Declared organism:
Enterobacteria phage f1

Determined organism:
  • Pseudomonas phage LIT1

    Pseudomonas phage LIT1

    • Public DB hit
      GI:259048607
      FN422399
    • Hit length
      72,544 bp
    • E Value
      0E0
    • BLAST Score
      28,157 bits
    • Similarity
      96.92%
    • Coverage
      23.28%
    • Alignment (schematic)

      SEQ ID NO 3
      23.28% cov
      FN422399
      23.15% cov
    • Alignment Length
      16,818 bp
  • Pseudomonas phage LUZ7

    Pseudomonas phage LUZ7

    • Public DB hit
      GI:259048491
      FN422398
    • Hit length
      74,901 bp
    • E Value
      0E0
    • BLAST Score
      1,655.7 bits
    • Similarity
      75.61%
    • Coverage
      5.19%
    • Alignment (schematic)

      SEQ ID NO 3
      5.19% cov
      FN422398
      5.02% cov
    • Alignment Length
      3,903 bp
  • Pseudomonas phage D3

    Pseudomonas phage D3

    • Public DB hit
      GI:291464450
      AF165214
    • Hit length
      56,426 bp
    • E Value
      4.68E-5
    • BLAST Score
      65.8 bits
    • Similarity
      100%
    • Coverage
      0.05%
    • Alignment (schematic)

      SEQ ID NO 3
      0.05% cov
      AF165214
      0.06% cov
    • Alignment Length
      35 bp
    • CIGAR string
      2466H35M69676H mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
20 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
4
Length
43,462
Type
DNA
Locations
Claims, Fulltext

Declared organism:
Enterobacteria phage f1

Determined organism:
Occurrence
14 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
5
Length
40,763
Type
DNA
Locations
Claims, Fulltext

Declared organism:
Enterobacteria phage f1

Determined organism:
  • Staphylococcus phage phiPVL-CN125

    Staphylococcus phage phiPVL-CN125

    • Public DB hit
      GI:238683986
      FJ713816
    • Hit length
      44,492 bp
    • E Value
      0E0
    • BLAST Score
      35,360.8 bits
    • Similarity
      98.78%
    • Coverage
      48.74%
    • Alignment (schematic)

      SEQ ID NO 5
      48.74% cov
      FJ713816
      44.68% cov
    • Alignment Length
      19,895 bp
    • CIGAR string
      27MN2MN822MN433MN18MN71MN952MN79MN1442MN1289MN962MN381MN95MN5MN8MD2MI9MN2MN5MN36MN16MN32MN143MN583MN41MN101MN107MN11MN11MN5MN2MN8MN2MN14MN8MN14MN293MN117MN122MN194MN47MN71MN127MN765MN59MN168MN19MN44MN5MN158MN26MN71MN86MN274MN103MN5MN70MN11MN423MN55MN11MN8MN5MN5MN11MN3MI4MD3MN2MND4MNMI4MN2MI2MND2MN2MN3MI2MD5MN2MN2MN8MN11MN68MN11MN2MN17MN27MN28MN5MN14MN208MN18MN2MN2MN41MN59MN153MN7MN23MN5MN68MN8MN5MN2MN14MN11MN5MN23MN11MN6M2D3MN2I7MIM2I18M2N279MN249MN524MN35MI371MN4MN4MNMN5MN11MN37M2N2MN9MNMN2MN7MN3MIMND7MN19MN5MIMD4MN3MN4MN3M3N3MNMN9MN7MN2MN2MN8MN4MIMD2MN2MND2MN2MN2MNMI4MNMDMI6MIMD2MN44MN8MN47MN8M2N7MN5MN5MN2MN5MN5MN5MN2MN98MN114MI32MN473MN505MD3M2I156MN16MN30MN119MN2MN11MN8MN26MN44MN14MN2MN59MN5MN8MN12MN28MN70MN156MI542MN560MI292MN197M2I360MN164MI174MN21MN205MN195MI258MN265MN110MN85MN12MN10MN38MN14MN7MN21MN2MN65MN23MN132MN21MN5MN13MNI29MN20M20895H mismatches: 201 - insertions: 27 - deletions: 14
  • Staphylococcus phage phiPVL108

    Staphylococcus phage phiPVL108

    • Public DB hit
      GI:119225778
      AB243556
    • Hit length
      44,857 bp
    • E Value
      0E0
    • BLAST Score
      35,298 bits
    • Similarity
      98.73%
    • Coverage
      48.74%
    • Alignment (schematic)

      SEQ ID NO 5
      48.74% cov
      AB243556
      44.3% cov
    • Alignment Length
      19,885 bp
    • CIGAR string
      27MN2MN822MN452MN71MN952MN79MN435MN1006MN1289MN962MN381MN95MN5MN8MD2MI9MN2MN5MN36MN16MN32MN143MN583MN41MN101MN107MN11MN11MN5MN2MN8MN2MN14MN8MN14MN293MN117MN122MN194MN47MN71MN127MN765MN59MN188MN44MN5MN158MN26MN71MN86MN48MI226MN103MN5MN70MN11MN479MN11MN8MN5MN5MN11MN3MI4MD3MN2MND4MNMI4MN2MI2MND2MN2MN3MI2MD5MN2MN2MN8MN11MN68MN11MN2MN17MN27MN28MN5MN14MN208MN18MN2MN2MN41MN59MN153MN7MN23MN5MN68MN8MN5MN2MN14MN11MN5MN23MN11MN6M2D3MN2I7MIM2I18M2N279MN249MN496MN27MN406MN4MN4MNMN5MN14MN34M2N2MN9MNMN2MN7MN3MIMND7MN19MN5MIMD4MN3MN4MN3M3N3MNMN9MN7MN2MN2MN8MN4MIMD2MN2MND2MN2MN2MNMI4MNMDMI6MIMD2MN44MN8MN47MN8M2N7MN5MN5MN2MN5MN5MN5MN2MN98MN146MN1139MN16MN30MN119MN2MN11MN8MN26MN44MN14MN2MN59MN5MN8MN12MN22MN15MN6M2N2MN11MN5MN5MN32MN2M2N109MN65MN98MN3MN7MN5MN8MN17MN24MN28MN2MN37MN71MN39MN32MN980MN557MN338MN21MN205MN686MN32MN110MN85MN12MN10MN38MN14MN7MN21MN2MN65MN23MN132MN21MN5MN13MN29MN20M20895H mismatches: 222 - insertions: 17 - deletions: 13
  • Staphylococcus aureus subsp. aureus ED98

    Staphylococcus aureus subsp. aureus ED98

    • Public DB hit
      GI:262073980
      CP001781
    • Hit length
      2,824,404 bp
    • E Value
      0E0
    • BLAST Score
      35,004.4 bits
    • Similarity
      97.82%
    • Coverage
      49.76%
    • Alignment (schematic)

      SEQ ID NO 5
      49.76% cov
      CP001781
      0.72% cov
    • Alignment Length
      20,314 bp
  • Staphylococcus aureus subsp. aureus MSSA476

    Staphylococcus aureus subsp. aureus MSSA476

    • Public DB hit
      GI:49243355
      BX571857
    • Hit length
      2,799,802 bp
    • E Value
      0E0
    • BLAST Score
      31,493.9 bits
    • Similarity
      99.31%
    • Coverage
      42.73%
    • Alignment (schematic)

      SEQ ID NO 5
      42.73% cov
      BX571857
      0.62% cov
    • Alignment Length
      17,418 bp
  • Staphylococcus aureus subsp. aureus MW2

    Staphylococcus aureus subsp. aureus MW2

    • Public DB hit
      GI:47118312
      BA000033
    • Hit length
      2,820,462 bp
    • E Value
      0E0
    • BLAST Score
      31,482.8 bits
    • Similarity
      99.29%
    • Coverage
      42.73%
    • Alignment (schematic)

      SEQ ID NO 5
      42.73% cov
      BA000033
      0.62% cov
    • Alignment Length
      17,418 bp
  • Staphylococcus aureus subsp. aureus NCTC 8325

    Staphylococcus aureus subsp. aureus NCTC 8325

    • Public DB hit
      GI:87201381
      CP000253
    • Hit length
      2,821,361 bp
    • E Value
      0E0
    • BLAST Score
      31,008.2 bits
    • Similarity
      98.8%
    • Coverage
      42.73%
    • Alignment (schematic)

      SEQ ID NO 5
      42.73% cov
      CP000253
      0.62% cov
    • Alignment Length
      17,433 bp
  • Staphylococcus phage phi13

    Staphylococcus phage phi13

    • Public DB hit
      GI:18920591
      AF424783
    • Hit length
      42,722 bp
    • E Value
      0E0
    • BLAST Score
      31,008.2 bits
    • Similarity
      98.8%
    • Coverage
      42.73%
    • Alignment (schematic)

      SEQ ID NO 5
      42.73% cov
      AF424783
      40.78% cov
    • Alignment Length
      17,433 bp
  • Staphylococcus phage tp310-3

    Staphylococcus phage tp310-3

    • Public DB hit
      GI:154818103
      EF462199
    • Hit length
      42,973 bp
    • E Value
      0E0
    • BLAST Score
      30,919.6 bits
    • Similarity
      98.71%
    • Coverage
      42.73%
    • Alignment (schematic)

      SEQ ID NO 5
      42.73% cov
      EF462199
      40.54% cov
    • Alignment Length
      17,433 bp
  • Staphylococcus phage tp310-1

    Staphylococcus phage tp310-1

    • Public DB hit
      GI:154817975
      EF462197
    • Hit length
      42,232 bp
    • E Value
      0E0
    • BLAST Score
      30,914 bits
    • Similarity
      98.7%
    • Coverage
      42.73%
    • Alignment (schematic)

      SEQ ID NO 5
      42.73% cov
      EF462197
      41.25% cov
    • Alignment Length
      17,433 bp
  • Staphylococcus phage SAP090B

    Staphylococcus phage SAP090B

    • Public DB hit
      GI:260066076
      GQ915271
    • Hit length
      26,877 bp
    • E Value
      0E0
    • BLAST Score
      30,890 bits
    • Similarity
      98.68%
    • Coverage
      42.73%
    • Alignment (schematic)

      SEQ ID NO 5
      42.73% cov
      GQ915271
      64.8% cov
    • Alignment Length
      17,428 bp
  • Staphylococcus phage PVL

    Staphylococcus phage PVL

    • Public DB hit
      GI:8051688
      AB009866
    • Hit length
      41,401 bp
    • E Value
      0E0
    • BLAST Score
      30,574.3 bits
    • Similarity
      98.36%
    • Coverage
      42.73%
    • Alignment (schematic)

      SEQ ID NO 5
      42.73% cov
      AB009866
      42.04% cov
    • Alignment Length
      17,431 bp
  • Staphylococcus aureus subsp. aureus ED133

    Staphylococcus aureus subsp. aureus ED133

    • Public DB hit
      GI:298693322
      CP001996
    • Hit length
      2,832,478 bp
    • E Value
      0E0
    • BLAST Score
      29,674.9 bits
    • Similarity
      94.47%
    • Coverage
      47.32%
    • Alignment (schematic)

      SEQ ID NO 5
      47.32% cov
      CP001996
      0.68% cov
    • Alignment Length
      19,386 bp
  • Staphylococcus prophage phiPV83

    Staphylococcus prophage phiPV83

    • Public DB hit
      GI:8918747
      AB044554
    • Hit length
      45,636 bp
    • E Value
      0E0
    • BLAST Score
      19,895.1 bits
    • Similarity
      94.05%
    • Coverage
      32.22%
    • Alignment (schematic)

      SEQ ID NO 5
      32.22% cov
      AB044554
      28.78% cov
    • Alignment Length
      13,217 bp
  • Staphylococcus aureus subsp. aureus str. Newman

    Staphylococcus aureus subsp. aureus str. Newman

    • Public DB hit
      GI:150373012
      AP009351
    • Hit length
      2,878,897 bp
    • E Value
      0E0
    • BLAST Score
      19,688.3 bits
    • Similarity
      99.68%
    • Coverage
      26.4%
    • Alignment (schematic)

      SEQ ID NO 5
      26.4% cov
      AP009351
      0.37% cov
    • Alignment Length
      10,765 bp
  • Staphylococcus phage phiNM3

    Staphylococcus phage phiNM3

    • Public DB hit
      GI:104641818
      DQ530361
    • Hit length
      44,061 bp
    • E Value
      0E0
    • BLAST Score
      19,688.3 bits
    • Similarity
      99.68%
    • Coverage
      26.4%
    • Alignment (schematic)

      SEQ ID NO 5
      26.4% cov
      DQ530361
      24.43% cov
    • Alignment Length
      10,765 bp
  • Staphylococcus aureus subsp. aureus MRSA252

    Staphylococcus aureus subsp. aureus MRSA252

    • Public DB hit
      GI:49240382
      BX571856
    • Hit length
      2,902,619 bp
    • E Value
      0E0
    • BLAST Score
      19,688.3 bits
    • Similarity
      99.68%
    • Coverage
      26.4%
    • Alignment (schematic)

      SEQ ID NO 5
      26.4% cov
      BX571856
      0.37% cov
    • Alignment Length
      10,765 bp
  • Staphylococcus aureus subsp. aureus USA300_TCH1516

    Staphylococcus aureus subsp. aureus USA300_TCH1516

    • Public DB hit
      GI:160367075
      CP000730
    • Hit length
      2,872,915 bp
    • E Value
      0E0
    • BLAST Score
      12,901.8 bits
    • Similarity
      96.92%
    • Coverage
      18.9%
    • Alignment (schematic)

      SEQ ID NO 5
      18.9% cov
      CP000730
      0.27% cov
    • Alignment Length
      7,717 bp
  • Staphylococcus aureus subsp. aureus USA300_FPR3757

    Staphylococcus aureus subsp. aureus USA300_FPR3757

    • Public DB hit
      GI:87125858
      CP000255
    • Hit length
      2,872,769 bp
    • E Value
      0E0
    • BLAST Score
      12,901.8 bits
    • Similarity
      96.92%
    • Coverage
      18.9%
    • Alignment (schematic)

      SEQ ID NO 5
      18.9% cov
      CP000255
      0.27% cov
    • Alignment Length
      7,717 bp
  • Staphylococcus aureus subsp. aureus Mu3

    Staphylococcus aureus subsp. aureus Mu3

    • Public DB hit
      GI:156720466
      AP009324
    • Hit length
      2,880,168 bp
    • E Value
      0E0
    • BLAST Score
      11,160.4 bits
    • Similarity
      97.33%
    • Coverage
      16.12%
    • Alignment (schematic)

      SEQ ID NO 5
      16.12% cov
      AP009324
      0.23% cov
    • Alignment Length
      6,584 bp
  • Staphylococcus aureus subsp. aureus Mu50

    Staphylococcus aureus subsp. aureus Mu50

    • Public DB hit
      GI:47208328
      BA000017
    • Hit length
      2,878,529 bp
    • E Value
      0E0
    • BLAST Score
      11,160.4 bits
    • Similarity
      97.33%
    • Coverage
      16.12%
    • Alignment (schematic)

      SEQ ID NO 5
      16.12% cov
      BA000017
      0.23% cov
    • Alignment Length
      6,584 bp
  • Staphylococcus aureus subsp. aureus JKD6159

    Staphylococcus aureus subsp. aureus JKD6159

    • Public DB hit
      GI:304365608
      CP002114
    • Hit length
      2,811,435 bp
    • E Value
      0E0
    • BLAST Score
      11,132.7 bits
    • Similarity
      96.36%
    • Coverage
      16.61%
    • Alignment (schematic)

      SEQ ID NO 5
      16.61% cov
      CP002114
      0.24% cov
    • Alignment Length
      6,789 bp
  • Staphylococcus aureus subsp. aureus ECT-R 2

    Staphylococcus aureus subsp. aureus ECT-R 2

    • Public DB hit
      GI:312828563
      FR714927
    • Hit length
      2,729,540 bp
    • E Value
      0E0
    • BLAST Score
      10,741.2 bits
    • Similarity
      99.29%
    • Coverage
      14.58%
    • Alignment (schematic)

      SEQ ID NO 5
      14.58% cov
      FR714927
      0.22% cov
    • Alignment Length
      5,942 bp
  • Staphylococcus aureus 04-02981

    Staphylococcus aureus 04-02981

    • Public DB hit
      GI:311222926
      CP001844
    • Hit length
      2,821,452 bp
    • E Value
      0E0
    • BLAST Score
      10,741.2 bits
    • Similarity
      99.29%
    • Coverage
      14.58%
    • Alignment (schematic)

      SEQ ID NO 5
      14.58% cov
      CP001844
      0.21% cov
    • Alignment Length
      5,942 bp
  • Staphylococcus aureus subsp. aureus N315

    Staphylococcus aureus subsp. aureus N315

    • Public DB hit
      GI:47118324
      BA000018
    • Hit length
      2,814,816 bp
    • E Value
      0E0
    • BLAST Score
      10,741.2 bits
    • Similarity
      99.29%
    • Coverage
      14.58%
    • Alignment (schematic)

      SEQ ID NO 5
      14.58% cov
      BA000018
      0.21% cov
    • Alignment Length
      5,942 bp
  • Staphylococcus aureus subsp. aureus str. JKD6008

    Staphylococcus aureus subsp. aureus str. JKD6008

    • Public DB hit
      GI:302749911
      CP002120
    • Hit length
      2,924,344 bp
    • E Value
      0E0
    • BLAST Score
      7,936.2 bits
    • Similarity
      97.67%
    • Coverage
      11.34%
    • Alignment (schematic)

      SEQ ID NO 5
      11.34% cov
      CP002120
      0.16% cov
    • Alignment Length
      4,632 bp
Occurrence
14 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
6
Length
41,565
Type
DNA
Locations
Claims, Fulltext

Declared organism:
Bacteriophage F87s/06

Determined organism:
  • Staphylococcus aureus subsp. aureus JH1

    Staphylococcus aureus subsp. aureus JH1

    • Public DB hit
      GI:149944932
      CP000736
    • Hit length
      2,906,507 bp
    • E Value
      0E0
    • BLAST Score
      20,932.9 bits
    • Similarity
      98.83%
    • Coverage
      28.26%
    • Alignment (schematic)

      SEQ ID NO 6
      28.26% cov
      CP000736
      0.4% cov
    • Alignment Length
      11,759 bp
    • CIGAR string
      42MI209MN267MN388MN2MN292MN491MN83MN3000MN411MN192MD1080MI405MI135MNMI7MI20MD14MN8MN11MN20MN2MN14MN1431MN553MN120MN284MN6MNMN40MN3MN83MN5MN8MN5MN2MN20MN5MN2MN2MN5MN2MN51MI5MD21MN22MN5MN27MN4MN14MD2MI12MN8MN2MN8MN47MN5MN5MN3MN7MN17MN3MN8MN16MN5MN14MN8MN500MN245MN170MN59MN5MN2MN7MN3MN5MN5MN4MN28MN22MN11MN3MN6MN3MN20MN23MN8M2N7MNMN15MN2MN2MN47MN23MN5MN20MN47MN8MN5MN35MN158M2NMN2MN5MN2MN5MN2MN2MN12MNMN2M2N4MN5M2N4MD3MIM2N3MN16MN4M2N5MN11MIMDMN3M2N9MI2M2D3MI2MNMNMN14M29817H mismatches: 119 - insertions: 11 - deletions: 8
  • Staphylococcus aureus subsp. aureus JH9

    Staphylococcus aureus subsp. aureus JH9

    • Public DB hit
      GI:147739516
      CP000703
    • Hit length
      2,906,700 bp
    • E Value
      0E0
    • BLAST Score
      20,932.9 bits
    • Similarity
      98.83%
    • Coverage
      28.26%
    • Alignment (schematic)

      SEQ ID NO 6
      28.26% cov
      CP000703
      0.4% cov
    • Alignment Length
      11,759 bp
    • CIGAR string
      42MI209MN267MN388MN2MN292MN491MN83MN3000MN411MN192MD1080MI405MI135MNMI7MI20MD14MN8MN11MN20MN2MN14MN1431MN553MN120MN284MN6MNMN40MN3MN83MN5MN8MN5MN2MN20MN5MN2MN2MN5MN2MN51MI5MD21MN22MN5MN27MN4MN14MD2MI12MN8MN2MN8MN47MN5MN5MN3MN7MN17MN3MN8MN16MN5MN14MN8MN500MN245MN170MN59MN5MN2MN7MN3MN5MN5MN4MN28MN22MN11MN3MN6MN3MN20MN23MN8M2N7MNMN15MN2MN2MN47MN23MN5MN20MN47MN8MN5MN35MN158M2NMN2MN5MN2MN5MN2MN2MN12MNMN2M2N4MN5M2N4MD3MIM2N3MN16MN4M2N5MN11MIMDMN3M2N9MI2M2D3MI2MNMNMN14M29817H mismatches: 119 - insertions: 11 - deletions: 8
  • Staphylococcus aureus subsp. aureus str. Newman

    Staphylococcus aureus subsp. aureus str. Newman

    • Public DB hit
      GI:150373012
      AP009351
    • Hit length
      2,878,897 bp
    • E Value
      0E0
    • BLAST Score
      20,098.2 bits
    • Similarity
      97.55%
    • Coverage
      28.24%
    • Alignment (schematic)

      SEQ ID NO 6
      28.24% cov
      AP009351
      0.41% cov
    • Alignment Length
      11,786 bp
    • CIGAR string
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mismatches: 218 - insertions: 48 - deletions: 23
  • Staphylococcus phage phiNM3

    Staphylococcus phage phiNM3

    • Public DB hit
      GI:104641818
      DQ530361
    • Hit length
      44,061 bp
    • E Value
      0E0
    • BLAST Score
      20,098.2 bits
    • Similarity
      97.55%
    • Coverage
      28.24%
    • Alignment (schematic)

      SEQ ID NO 6
      28.24% cov
      DQ530361
      26.7% cov
    • Alignment Length
      11,786 bp
  • Staphylococcus aureus subsp. aureus MRSA252

    Staphylococcus aureus subsp. aureus MRSA252

    • Public DB hit
      GI:49240382
      BX571856
    • Hit length
      2,902,619 bp
    • E Value
      0E0
    • BLAST Score
      20,076 bits
    • Similarity
      97.51%
    • Coverage
      28.24%
    • Alignment (schematic)

      SEQ ID NO 6
      28.24% cov
      BX571856
      0.41% cov
    • Alignment Length
      11,786 bp
  • Staphylococcus aureus subsp. aureus JKD6159

    Staphylococcus aureus subsp. aureus JKD6159

    • Public DB hit
      GI:304365608
      CP002114
    • Hit length
      2,811,435 bp
    • E Value
      0E0
    • BLAST Score
      19,981.9 bits
    • Similarity
      97.44%
    • Coverage
      28.17%
    • Alignment (schematic)

      SEQ ID NO 6
      28.17% cov
      CP002114
      0.42% cov
    • Alignment Length
      11,757 bp
  • Staphylococcus phage P954

    Staphylococcus phage P954

    • Public DB hit
      GI:256681198
      GQ398772
    • Hit length
      40,761 bp
    • E Value
      0E0
    • BLAST Score
      19,734.4 bits
    • Similarity
      96.99%
    • Coverage
      28.26%
    • Alignment (schematic)

      SEQ ID NO 6
      28.26% cov
      GQ398772
      28.82% cov
    • Alignment Length
      11,779 bp
  • Staphylococcus aureus subsp. aureus ECT-R 2

    Staphylococcus aureus subsp. aureus ECT-R 2

    • Public DB hit
      GI:312828563
      FR714927
    • Hit length
      2,729,540 bp
    • E Value
      0E0
    • BLAST Score
      19,571.9 bits
    • Similarity
      96.74%
    • Coverage
      28.24%
    • Alignment (schematic)

      SEQ ID NO 6
      28.24% cov
      FR714927
      0.43% cov
    • Alignment Length
      11,791 bp
  • Staphylococcus aureus subsp. aureus N315

    Staphylococcus aureus subsp. aureus N315

    • Public DB hit
      GI:47118324
      BA000018
    • Hit length
      2,814,816 bp
    • E Value
      0E0
    • BLAST Score
      19,562.7 bits
    • Similarity
      96.73%
    • Coverage
      28.24%
    • Alignment (schematic)

      SEQ ID NO 6
      28.24% cov
      BA000018
      0.42% cov
    • Alignment Length
      11,793 bp
  • Staphylococcus aureus 04-02981

    Staphylococcus aureus 04-02981

    • Public DB hit
      GI:311222926
      CP001844
    • Hit length
      2,821,452 bp
    • E Value
      0E0
    • BLAST Score
      19,557.1 bits
    • Similarity
      96.72%
    • Coverage
      28.24%
    • Alignment (schematic)

      SEQ ID NO 6
      28.24% cov
      CP001844
      0.42% cov
    • Alignment Length
      11,793 bp
  • Staphylococcus phage 77

    Staphylococcus phage 77

    • Public DB hit
      GI:40557216
      AY508486
    • Hit length
      41,708 bp
    • E Value
      0E0
    • BLAST Score
      19,540.5 bits
    • Similarity
      96.67%
    • Coverage
      28.26%
    • Alignment (schematic)

      SEQ ID NO 6
      28.26% cov
      AY508486
      28.22% cov
    • Alignment Length
      11,801 bp
  • Staphylococcus aureus subsp. aureus Mu3

    Staphylococcus aureus subsp. aureus Mu3

    • Public DB hit
      GI:156720466
      AP009324
    • Hit length
      2,880,168 bp
    • E Value
      0E0
    • BLAST Score
      19,239.5 bits
    • Similarity
      96.24%
    • Coverage
      28.24%
    • Alignment (schematic)

      SEQ ID NO 6
      28.24% cov
      AP009324
      0.41% cov
    • Alignment Length
      11,799 bp
  • Staphylococcus aureus subsp. aureus Mu50

    Staphylococcus aureus subsp. aureus Mu50

    • Public DB hit
      GI:47208328
      BA000017
    • Hit length
      2,878,529 bp
    • E Value
      0E0
    • BLAST Score
      19,239.5 bits
    • Similarity
      96.24%
    • Coverage
      28.24%
    • Alignment (schematic)

      SEQ ID NO 6
      28.24% cov
      BA000017
      0.41% cov
    • Alignment Length
      11,799 bp
  • Staphylococcus aureus subsp. aureus str. JKD6008

    Staphylococcus aureus subsp. aureus str. JKD6008

    • Public DB hit
      GI:302749911
      CP002120
    • Hit length
      2,924,344 bp
    • E Value
      0E0
    • BLAST Score
      19,174.9 bits
    • Similarity
      96.14%
    • Coverage
      28.24%
    • Alignment (schematic)

      SEQ ID NO 6
      28.24% cov
      CP002120
      0.4% cov
    • Alignment Length
      11,800 bp
  • Staphylococcus aureus subsp. aureus TW20

    Staphylococcus aureus subsp. aureus TW20

    • Public DB hit
      GI:269939526
      FN433596
    • Hit length
      3,043,210 bp
    • E Value
      0E0
    • BLAST Score
      19,174.9 bits
    • Similarity
      96.14%
    • Coverage
      28.24%
    • Alignment (schematic)

      SEQ ID NO 6
      28.24% cov
      FN433596
      0.39% cov
    • Alignment Length
      11,800 bp
  • Staphylococcus aureus subsp. aureus T0131

    Staphylococcus aureus subsp. aureus T0131

    • Public DB hit
      GI:329312723
      CP002643
    • Hit length
      2,913,900 bp
    • E Value
      0E0
    • BLAST Score
      19,163.8 bits
    • Similarity
      96.12%
    • Coverage
      28.24%
    • Alignment (schematic)

      SEQ ID NO 6
      28.24% cov
      CP002643
      0.4% cov
    • Alignment Length
      11,800 bp
  • Staphylococcus aureus subsp. aureus USA300_TCH1516

    Staphylococcus aureus subsp. aureus USA300_TCH1516

    • Public DB hit
      GI:160367075
      CP000730
    • Hit length
      2,872,915 bp
    • E Value
      0E0
    • BLAST Score
      18,297.7 bits
    • Similarity
      94.8%
    • Coverage
      28.24%
    • Alignment (schematic)

      SEQ ID NO 6
      28.24% cov
      CP000730
      0.41% cov
    • Alignment Length
      11,812 bp
  • Staphylococcus aureus subsp. aureus USA300_FPR3757

    Staphylococcus aureus subsp. aureus USA300_FPR3757

    • Public DB hit
      GI:87125858
      CP000255
    • Hit length
      2,872,769 bp
    • E Value
      0E0
    • BLAST Score
      18,292.2 bits
    • Similarity
      94.79%
    • Coverage
      28.24%
    • Alignment (schematic)

      SEQ ID NO 6
      28.24% cov
      CP000255
      0.41% cov
    • Alignment Length
      11,812 bp
  • Staphylococcus aureus subsp. aureus TCH60

    Staphylococcus aureus subsp. aureus TCH60

    • Public DB hit
      GI:312436391
      CP002110
    • Hit length
      2,802,675 bp
    • E Value
      0E0
    • BLAST Score
      17,247 bits
    • Similarity
      98.51%
    • Coverage
      23.53%
    • Alignment (schematic)

      SEQ ID NO 6
      23.53% cov
      CP002110
      0.35% cov
    • Alignment Length
      9,784 bp
  • Staphylococcus aureus subsp. aureus ED133

    Staphylococcus aureus subsp. aureus ED133

    • Public DB hit
      GI:298693322
      CP001996
    • Hit length
      2,832,478 bp
    • E Value
      0E0
    • BLAST Score
      16,349.5 bits
    • Similarity
      91.91%
    • Coverage
      28.17%
    • Alignment (schematic)

      SEQ ID NO 6
      28.17% cov
      CP001996
      0.41% cov
    • Alignment Length
      11,814 bp
  • Staphylococcus aureus subsp. aureus NCTC 8325

    Staphylococcus aureus subsp. aureus NCTC 8325

    • Public DB hit
      GI:87201381
      CP000253
    • Hit length
      2,821,361 bp
    • E Value
      0E0
    • BLAST Score
      16,157.5 bits
    • Similarity
      99.11%
    • Coverage
      21.63%
    • Alignment (schematic)

      SEQ ID NO 6
      21.63% cov
      CP000253
      0.32% cov
    • Alignment Length
      8,991 bp
  • Staphylococcus phage phi13

    Staphylococcus phage phi13

    • Public DB hit
      GI:18920591
      AF424783
    • Hit length
      42,722 bp
    • E Value
      0E0
    • BLAST Score
      16,157.5 bits
    • Similarity
      99.11%
    • Coverage
      21.63%
    • Alignment (schematic)

      SEQ ID NO 6
      21.63% cov
      AF424783
      21.04% cov
    • Alignment Length
      8,991 bp
  • Staphylococcus phage tp310-3

    Staphylococcus phage tp310-3

    • Public DB hit
      GI:154818103
      EF462199
    • Hit length
      42,973 bp
    • E Value
      0E0
    • BLAST Score
      15,996.8 bits
    • Similarity
      98.79%
    • Coverage
      21.63%
    • Alignment (schematic)

      SEQ ID NO 6
      21.63% cov
      EF462199
      20.92% cov
    • Alignment Length
      8,993 bp
  • Staphylococcus phage SAP090B

    Staphylococcus phage SAP090B

    • Public DB hit
      GI:260066076
      GQ915271
    • Hit length
      26,877 bp
    • E Value
      0E0
    • BLAST Score
      13,328.4 bits
    • Similarity
      99.52%
    • Coverage
      17.62%
    • Alignment (schematic)

      SEQ ID NO 6
      17.62% cov
      GQ915271
      27.24% cov
    • Alignment Length
      7,324 bp
  • Staphylococcus phage tp310-1

    Staphylococcus phage tp310-1

    • Public DB hit
      GI:154817975
      EF462197
    • Hit length
      42,232 bp
    • E Value
      0E0
    • BLAST Score
      12,115.1 bits
    • Similarity
      96.25%
    • Coverage
      17.78%
    • Alignment (schematic)

      SEQ ID NO 6
      17.78% cov
      EF462197
      17.52% cov
    • Alignment Length
      7,420 bp
Occurrence
14 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
7
Length
42,325
Type
DNA
Locations
Claims, Fulltext

Declared organism:
Listeria phage A500

Determined organism:
  • Staphylococcus aureus subsp. aureus JH1

    Staphylococcus aureus subsp. aureus JH1

    • Public DB hit
      GI:149944932
      CP000736
    • Hit length
      2,906,507 bp
    • E Value
      0E0
    • BLAST Score
      45,726 bits
    • Similarity
      99.62%
    • Coverage
      59.18%
    • Alignment (schematic)

      SEQ ID NO 7
      59.18% cov
      CP000736
      0.86% cov
    • Alignment Length
      25,063 bp
    • CIGAR string
      480MD2011MD388MD1572MD123MN2MN41MN121MN123MN11MN36MN160MN13MN63M2N184MD8MD29MN236MN72MN32MN137MN186MN35MN73MN13MI3MD2MN3MN4MIMDMN5M2NMN4MN4MNM2N2M2N2MNMN16MN2MN8M2N4M2N2MDMIN5MN2M2N2M3N2MN2MI2MD2MN3MN15MN4MN2MN3MNMI4MNMDN4MN6MNMN17MN2MDMI737MD114MI1085MD2701MI277MIMN2MDN40MN1273MD53MI9MI1324MI2799MI23MI1802MI993MD11MD5427M17277H mismatches: 62 - insertions: 15 - deletions: 18
  • Staphylococcus aureus subsp. aureus JH9

    Staphylococcus aureus subsp. aureus JH9

    • Public DB hit
      GI:147739516
      CP000703
    • Hit length
      2,906,700 bp
    • E Value
      0E0
    • BLAST Score
      45,726 bits
    • Similarity
      99.62%
    • Coverage
      59.18%
    • Alignment (schematic)

      SEQ ID NO 7
      59.18% cov
      CP000703
      0.86% cov
    • Alignment Length
      25,063 bp
    • CIGAR string
      480MD2011MD388MD1572MD123MN2MN41MN121MN123MN11MN36MN160MN13MN63M2N184MD8MD29MN236MN72MN32MN137MN186MN35MN73MN13MI3MD2MN3MN4MIMDMN5M2NMN4MN4MNM2N2M2N2MNMN16MN2MN8M2N4M2N2MDMIN5MN2M2N2M3N2MN2MI2MD2MN3MN15MN4MN2MN3MNMI4MNMDN4MN6MNMN17MN2MDMI737MD114MI1085MD2701MI277MIMN2MDN40MN1273MD53MI9MI1324MI2799MI23MI1802MI993MD11MD5427M17277H mismatches: 62 - insertions: 15 - deletions: 18
  • Staphylococcus aureus subsp. aureus USA300_TCH1516

    Staphylococcus aureus subsp. aureus USA300_TCH1516

    • Public DB hit
      GI:160367075
      CP000730
    • Hit length
      2,872,915 bp
    • E Value
      0E0
    • BLAST Score
      42,834.2 bits
    • Similarity
      97.53%
    • Coverage
      59.18%
    • Alignment (schematic)

      SEQ ID NO 7
      59.18% cov
      CP000730
      0.87% cov
    • Alignment Length
      25,118 bp
  • Staphylococcus aureus subsp. aureus USA300_FPR3757

    Staphylococcus aureus subsp. aureus USA300_FPR3757

    • Public DB hit
      GI:87125858
      CP000255
    • Hit length
      2,872,769 bp
    • E Value
      0E0
    • BLAST Score
      42,828.6 bits
    • Similarity
      97.52%
    • Coverage
      59.18%
    • Alignment (schematic)

      SEQ ID NO 7
      59.18% cov
      CP000255
      0.87% cov
    • Alignment Length
      25,118 bp
  • Staphylococcus phage P954

    Staphylococcus phage P954

    • Public DB hit
      GI:256681198
      GQ398772
    • Hit length
      40,761 bp
    • E Value
      0E0
    • BLAST Score
      35,327.5 bits
    • Similarity
      97.63%
    • Coverage
      48.67%
    • Alignment (schematic)

      SEQ ID NO 7
      48.67% cov
      GQ398772
      50.52% cov
    • Alignment Length
      20,639 bp
  • Staphylococcus aureus subsp. aureus str. Newman

    Staphylococcus aureus subsp. aureus str. Newman

    • Public DB hit
      GI:150373012
      AP009351
    • Hit length
      2,878,897 bp
    • E Value
      0E0
    • BLAST Score
      32,864.1 bits
    • Similarity
      98.48%
    • Coverage
      44.03%
    • Alignment (schematic)

      SEQ ID NO 7
      44.03% cov
      AP009351
      0.65% cov
    • Alignment Length
      18,680 bp
  • Staphylococcus phage phiNM3

    Staphylococcus phage phiNM3

    • Public DB hit
      GI:104641818
      DQ530361
    • Hit length
      44,061 bp
    • E Value
      0E0
    • BLAST Score
      32,864.1 bits
    • Similarity
      98.48%
    • Coverage
      44.03%
    • Alignment (schematic)

      SEQ ID NO 7
      44.03% cov
      DQ530361
      42.35% cov
    • Alignment Length
      18,680 bp
  • Staphylococcus aureus subsp. aureus MRSA252

    Staphylococcus aureus subsp. aureus MRSA252

    • Public DB hit
      GI:49240382
      BX571856
    • Hit length
      2,902,619 bp
    • E Value
      0E0
    • BLAST Score
      32,834.6 bits
    • Similarity
      98.45%
    • Coverage
      44.03%
    • Alignment (schematic)

      SEQ ID NO 7
      44.03% cov
      BX571856
      0.64% cov
    • Alignment Length
      18,680 bp
  • Staphylococcus phage 77

    Staphylococcus phage 77

    • Public DB hit
      GI:40557216
      AY508486
    • Hit length
      41,708 bp
    • E Value
      0E0
    • BLAST Score
      32,180.8 bits
    • Similarity
      96.99%
    • Coverage
      45.24%
    • Alignment (schematic)

      SEQ ID NO 7
      45.24% cov
      AY508486
      45.97% cov
    • Alignment Length
      19,215 bp
  • Staphylococcus aureus subsp. aureus TCH60

    Staphylococcus aureus subsp. aureus TCH60

    • Public DB hit
      GI:312436391
      CP002110
    • Hit length
      2,802,675 bp
    • E Value
      0E0
    • BLAST Score
      32,073.7 bits
    • Similarity
      98.95%
    • Coverage
      42.38%
    • Alignment (schematic)

      SEQ ID NO 7
      42.38% cov
      CP002110
      0.64% cov
    • Alignment Length
      17,957 bp
  • Staphylococcus aureus subsp. aureus Mu3

    Staphylococcus aureus subsp. aureus Mu3

    • Public DB hit
      GI:156720466
      AP009324
    • Hit length
      2,880,168 bp
    • E Value
      0E0
    • BLAST Score
      30,036.9 bits
    • Similarity
      95.76%
    • Coverage
      44.03%
    • Alignment (schematic)

      SEQ ID NO 7
      44.03% cov
      AP009324
      0.65% cov
    • Alignment Length
      18,740 bp
  • Staphylococcus aureus subsp. aureus Mu50

    Staphylococcus aureus subsp. aureus Mu50

    • Public DB hit
      GI:47208328
      BA000017
    • Hit length
      2,878,529 bp
    • E Value
      0E0
    • BLAST Score
      30,036.9 bits
    • Similarity
      95.76%
    • Coverage
      44.03%
    • Alignment (schematic)

      SEQ ID NO 7
      44.03% cov
      BA000017
      0.65% cov
    • Alignment Length
      18,740 bp
  • Staphylococcus aureus subsp. aureus TW20

    Staphylococcus aureus subsp. aureus TW20

    • Public DB hit
      GI:269939526
      FN433596
    • Hit length
      3,043,210 bp
    • E Value
      0E0
    • BLAST Score
      30,035 bits
    • Similarity
      95.76%
    • Coverage
      44.04%
    • Alignment (schematic)

      SEQ ID NO 7
      44.04% cov
      FN433596
      0.61% cov
    • Alignment Length
      18,744 bp
  • Staphylococcus aureus subsp. aureus T0131

    Staphylococcus aureus subsp. aureus T0131

    • Public DB hit
      GI:329312723
      CP002643
    • Hit length
      2,913,900 bp
    • E Value
      0E0
    • BLAST Score
      30,029.5 bits
    • Similarity
      95.75%
    • Coverage
      44.04%
    • Alignment (schematic)

      SEQ ID NO 7
      44.04% cov
      CP002643
      0.64% cov
    • Alignment Length
      18,742 bp
  • Staphylococcus aureus subsp. aureus str. JKD6008

    Staphylococcus aureus subsp. aureus str. JKD6008

    • Public DB hit
      GI:302749911
      CP002120
    • Hit length
      2,924,344 bp
    • E Value
      0E0
    • BLAST Score
      30,029.5 bits
    • Similarity
      95.75%
    • Coverage
      44.04%
    • Alignment (schematic)

      SEQ ID NO 7
      44.04% cov
      CP002120
      0.64% cov
    • Alignment Length
      18,743 bp
  • Staphylococcus aureus subsp. aureus N315

    Staphylococcus aureus subsp. aureus N315

    • Public DB hit
      GI:47118324
      BA000018
    • Hit length
      2,814,816 bp
    • E Value
      0E0
    • BLAST Score
      29,178.2 bits
    • Similarity
      98.06%
    • Coverage
      39.62%
    • Alignment (schematic)

      SEQ ID NO 7
      39.62% cov
      BA000018
      0.6% cov
    • Alignment Length
      16,813 bp
  • Staphylococcus aureus 04-02981

    Staphylococcus aureus 04-02981

    • Public DB hit
      GI:311222926
      CP001844
    • Hit length
      2,821,452 bp
    • E Value
      0E0
    • BLAST Score
      29,172.6 bits
    • Similarity
      98.06%
    • Coverage
      39.62%
    • Alignment (schematic)

      SEQ ID NO 7
      39.62% cov
      CP001844
      0.6% cov
    • Alignment Length
      16,813 bp
  • Staphylococcus aureus subsp. aureus ECT-R 2

    Staphylococcus aureus subsp. aureus ECT-R 2

    • Public DB hit
      GI:312828563
      FR714927
    • Hit length
      2,729,540 bp
    • E Value
      0E0
    • BLAST Score
      29,170.8 bits
    • Similarity
      98.05%
    • Coverage
      39.62%
    • Alignment (schematic)

      SEQ ID NO 7
      39.62% cov
      FR714927
      0.62% cov
    • Alignment Length
      16,812 bp
  • Staphylococcus aureus subsp. aureus JKD6159

    Staphylococcus aureus subsp. aureus JKD6159

    • Public DB hit
      GI:304365608
      CP002114
    • Hit length
      2,811,435 bp
    • E Value
      0E0
    • BLAST Score
      22,921.7 bits
    • Similarity
      99.62%
    • Coverage
      29.66%
    • Alignment (schematic)

      SEQ ID NO 7
      29.66% cov
      CP002114
      0.45% cov
    • Alignment Length
      12,563 bp
  • Staphylococcus aureus subsp. aureus NCTC 8325

    Staphylococcus aureus subsp. aureus NCTC 8325

    • Public DB hit
      GI:87201381
      CP000253
    • Hit length
      2,821,361 bp
    • E Value
      0E0
    • BLAST Score
      21,328.1 bits
    • Similarity
      99.38%
    • Coverage
      27.8%
    • Alignment (schematic)

      SEQ ID NO 7
      27.8% cov
      CP000253
      0.42% cov
    • Alignment Length
      11,772 bp
  • Staphylococcus phage phi13

    Staphylococcus phage phi13

    • Public DB hit
      GI:18920591
      AF424783
    • Hit length
      42,722 bp
    • E Value
      0E0
    • BLAST Score
      21,315.2 bits
    • Similarity
      99.36%
    • Coverage
      27.8%
    • Alignment (schematic)

      SEQ ID NO 7
      27.8% cov
      AF424783
      27.54% cov
    • Alignment Length
      11,772 bp
  • Staphylococcus phage tp310-3

    Staphylococcus phage tp310-3

    • Public DB hit
      GI:154818103
      EF462199
    • Hit length
      42,973 bp
    • E Value
      0E0
    • BLAST Score
      21,237.6 bits
    • Similarity
      99.24%
    • Coverage
      27.8%
    • Alignment (schematic)

      SEQ ID NO 7
      27.8% cov
      EF462199
      27.38% cov
    • Alignment Length
      11,775 bp
  • Staphylococcus aureus subsp. aureus ED133

    Staphylococcus aureus subsp. aureus ED133

    • Public DB hit
      GI:298693322
      CP001996
    • Hit length
      2,832,478 bp
    • E Value
      0E0
    • BLAST Score
      16,332.9 bits
    • Similarity
      91.92%
    • Coverage
      27.64%
    • Alignment (schematic)

      SEQ ID NO 7
      27.64% cov
      CP001996
      0.41% cov
    • Alignment Length
      11,791 bp
  • Staphylococcus phage SAP090B

    Staphylococcus phage SAP090B

    • Public DB hit
      GI:260066076
      GQ915271
    • Hit length
      26,877 bp
    • E Value
      0E0
    • BLAST Score
      13,082.8 bits
    • Similarity
      98.92%
    • Coverage
      17.29%
    • Alignment (schematic)

      SEQ ID NO 7
      17.29% cov
      GQ915271
      27.24% cov
    • Alignment Length
      7,324 bp
  • Staphylococcus prophage phiPV83

    Staphylococcus prophage phiPV83

    • Public DB hit
      GI:8918747
      AB044554
    • Hit length
      45,636 bp
    • E Value
      0E0
    • BLAST Score
      11,793.8 bits
    • Similarity
      95.79%
    • Coverage
      17.28%
    • Alignment (schematic)

      SEQ ID NO 7
      17.28% cov
      AB044554
      16.03% cov
    • Alignment Length
      7,347 bp
Occurrence
14 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
8
Length
68
Type
peptide
Locations
Fulltext

Declared organism:
Enterobacteria phage f1

Determined organism:
  • Enterococcus phage BC-611

    Enterococcus phage BC-611

    • Public DB hit
      GI:392972819
      YP_006488778
    • Hit length
      111 aa
    • E Value
      7.69E-29
    • BLAST Score
      131.3 bits
    • Similarity
      97.06%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      YP_006488778
      61.26% cov
    • Alignment Length
      68 aa
    • CIGAR string
      16M2N5MN7MN15MN19MN mismatches: 6 - insertions: 0 - deletions: 0
Occurrence
14 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
9
Length
90
Type
peptide
Locations
Fulltext

Declared organism:
Enterobacteria phage f1

Determined organism:
Occurrence
14 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
10
Length
258
Type
peptide
Locations
Fulltext

Declared organism:
Enterobacteria phage f1

Determined organism:
Occurrence
14 times in PatSeqDB
Tools
PatSeq Finder

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