US 7709225 B2 - Nucleic Acids Encoding Mutations In Sodium Channels Related To Epilepsy - The Lens

Nucleic Acids Encoding Mutations In Sodium Channels Related To Epilepsy

Published: May 4, 2010
Earliest Priority: Jul 18 2001
Family: 2
Cited Works: 31
Cited by: 6
Cites: 6
Sequences: 179
Additional Info: Cited Works Full text Published Sequence

Data obtained from: EMBL-EBI Pat DDBJ Pat NCBI GenBank USPTO PSIPS

179 sequences found in this patent (in total)

Download sequences in fasta format: 37 peptides 142 DNAs

Displaying 1 - 10 of 179 sequences

SEQ ID NO

Length

Sequence Type

Locations

Declared organism

Determined organism

Occurrence

Tools

SEQ ID NO

Length

8,381

Sequence Type

DNA

Locations

Summary

Declared organism

Homo sapiens

Determined organism

Homo sapiens
Homo sapiens
Public DB hit
GI:320461721
NM_001202435
1 of 4 hits reported for Homo sapiens.

Hit length
8,342 bp

E Value
0E0

BLAST Score
15,034.7 bits

Similarity

99.9%

Coverage

97.43%

Alignment (schematic)

SEQ ID NO 1

97.43% cov
NM_001202435

97.88% cov

Alignment Length
8,166 bp

CIGAR string
215H336M2N275MN2635MN1163MN2592MN2MD810MN345M mismatches: 7 - insertions: 0 - deletions: 1
Pan troglodytes
Pan troglodytes
Public DB hit
GI:332814608
XM_003309282
1 of 2 hits reported for Pan troglodytes.

Hit length
8,604 bp

E Value
0E0

BLAST Score
14,827.9 bits

Similarity

99.44%

Coverage

97.43%

Alignment (schematic)

SEQ ID NO 1

97.43% cov
XM_003309282

94.93% cov

Alignment Length
8,170 bp

CIGAR string
215H336M2N275MN114MN35MN497MN65MN65MN305MN191MN209MN239MN110MN278MN659MN137MN7MN33MN8MN65MN765MN358MN26MN257MN29MN113MN113MN269MN413MN248MN80MN139MN331MN50MN46M4I82MN24MN2MD432MN26MN5MD214MN237MN237M mismatches: 40 - insertions: 4 - deletions: 2
Pongo abelii
Pongo abelii
Public DB hit
GI:297668754
XM_002812545
1 of 2 hits reported for Pongo abelii.

Hit length
8,416 bp

E Value
0E0

BLAST Score
14,586 bits

Similarity

99.03%

Coverage

97.04%

Alignment (schematic)

SEQ ID NO 1

97.04% cov
XM_002812545

96.68% cov

Alignment Length
8,138 bp
Nomascus leucogenys
Nomascus leucogenys
Public DB hit
GI:332234085
XM_003266191
1 of 2 hits reported for Nomascus leucogenys.

Hit length
8,604 bp

E Value
0E0

BLAST Score
14,539.8 bits

Similarity

98.81%

Coverage

97.43%

Alignment (schematic)

SEQ ID NO 1

97.43% cov
XM_003266191

94.86% cov

Alignment Length
8,168 bp
Macaca mulatta
Macaca mulatta
Public DB hit
GI:297264199
XM_001101023

Hit length
8,223 bp

E Value
0E0

BLAST Score
14,229.6 bits

Similarity

98.26%

Coverage

97.04%

Alignment (schematic)

SEQ ID NO 1

97.04% cov
XM_001101023

98.86% cov

Alignment Length
8,141 bp
Callithrix jacchus
Callithrix jacchus
Public DB hit
GI:296204647
XM_002749372
1 of 2 hits reported for Callithrix jacchus.

Hit length
8,136 bp

E Value
0E0

BLAST Score
13,437.3 bits

Similarity

96.49%

Coverage

97.04%

Alignment (schematic)

SEQ ID NO 1

97.04% cov
XM_002749372

100% cov

Alignment Length
8,150 bp

Occurrence

11 times in PatSeqDB

in 2 extended families
(2 referenced in claims)
in 3 simple families
(3 referenced in claims)
in 11 documents

Tools

SEQ ID NO

Length

2,009

Sequence Type

peptide

Locations

Summary

Declared organism

Homo sapiens

Determined organism

Homo sapiens
Homo sapiens
Public DB hit
GI:23978418
BAC21101
1 of 2 hits reported for Homo sapiens.

Hit length
2,009 aa

E Value
0E0

BLAST Score
4,149.4 bits

Similarity

99.9%

Coverage

100%

Alignment (schematic)

SEQ ID NO 2

100% cov
BAC21101

100% cov

Alignment Length
2,009 aa

CIGAR string
95MN91MN1266MN554M mismatches: 3 - insertions: 0 - deletions: 0
Pan troglodytes
Pan troglodytes
Public DB hit
GI:332814609
XP_003309330
1 of 2 hits reported for Pan troglodytes.

Hit length
2,009 aa

E Value
0E0

BLAST Score
4,147.8 bits

Similarity

99.85%

Coverage

100%

Alignment (schematic)

SEQ ID NO 2

100% cov
XP_003309330

100% cov

Alignment Length
2,009 aa

CIGAR string
95MN91MN974MN291MN554M mismatches: 4 - insertions: 0 - deletions: 0
Nomascus leucogenys
Nomascus leucogenys
Public DB hit
GI:332234086
XP_003266239

Hit length
2,009 aa

E Value
0E0

BLAST Score
4,146.3 bits

Similarity

99.8%

Coverage

100%

Alignment (schematic)

SEQ ID NO 2

100% cov
XP_003266239

100% cov

Alignment Length
2,009 aa
Pongo abelii
Pongo abelii
Public DB hit
GI:297668755
XP_002812591

Hit length
2,009 aa

E Value
0E0

BLAST Score
4,139.7 bits

Similarity

99.75%

Coverage

100%

Alignment (schematic)

SEQ ID NO 2

100% cov
XP_002812591

100% cov

Alignment Length
2,009 aa
Callithrix jacchus
Callithrix jacchus
Public DB hit
GI:296204648
XP_002749418

Hit length
2,009 aa

E Value
0E0

BLAST Score
4,130.1 bits

Similarity

99.55%

Coverage

100%

Alignment (schematic)

SEQ ID NO 2

100% cov
XP_002749418

100% cov

Alignment Length
2,009 aa
Canis lupus familiaris
Canis lupus familiaris
Public DB hit
GI:74004474
XP_535941

Hit length
2,009 aa

E Value
0E0

BLAST Score
4,108.5 bits

Similarity

99.35%

Coverage

100%

Alignment (schematic)

SEQ ID NO 2

100% cov
XP_535941

100% cov

Alignment Length
2,009 aa
Oryctolagus cuniculus
Oryctolagus cuniculus
Public DB hit
GI:291391665
XP_002712295

Hit length
2,009 aa

E Value
0E0

BLAST Score
4,108.1 bits

Similarity

99.35%

Coverage

100%

Alignment (schematic)

SEQ ID NO 2

100% cov
XP_002712295

100% cov

Alignment Length
2,009 aa
Mus musculus
Mus musculus
Public DB hit
GI:123857421
CAM17351

Hit length
2,009 aa

E Value
0E0

BLAST Score
4,102.4 bits

Similarity

99.5%

Coverage

100%

Alignment (schematic)

SEQ ID NO 2

100% cov
CAM17351

100% cov

Alignment Length
2,009 aa
Bos taurus
Bos taurus
Public DB hit
GI:119887596
XP_001252668

Hit length
2,009 aa

E Value
0E0

BLAST Score
4,098.5 bits

Similarity

99.25%

Coverage

100%

Alignment (schematic)

SEQ ID NO 2

100% cov
XP_001252668

100% cov

Alignment Length
2,009 aa
Rattus norvegicus
Rattus norvegicus
Public DB hit
GI:13540709
NP_110502
1 of 2 hits reported for Rattus norvegicus.

Hit length
2,009 aa

E Value
0E0

BLAST Score
4,095.8 bits

Similarity

99.3%

Coverage

100%

Alignment (schematic)

SEQ ID NO 2

100% cov
NP_110502

100% cov

Alignment Length
2,009 aa
Macaca mulatta
Macaca mulatta
Public DB hit
GI:109099924
XP_001101023

Hit length
2,008 aa

E Value
0E0

BLAST Score
3,967.2 bits

Similarity

99.75%

Coverage

100%

Alignment (schematic)

SEQ ID NO 2

100% cov
XP_001101023

100% cov

Alignment Length
2,009 aa

Occurrence

11 times in PatSeqDB

in 2 extended families
(2 referenced in claims)
in 3 simple families
(2 referenced in claims)
in 11 documents

Tools

SEQ ID NO

Length

8,381

Sequence Type

DNA

Locations

Summary

Declared organism

Homo sapiens

Determined organism

Homo sapiens
Homo sapiens
Public DB hit
GI:320461721
NM_001202435
1 of 4 hits reported for Homo sapiens.

Hit length
8,342 bp

E Value
0E0

BLAST Score
15,034.7 bits

Similarity

99.9%

Coverage

97.43%

Alignment (schematic)

SEQ ID NO 3

97.43% cov
NM_001202435

97.88% cov

Alignment Length
8,166 bp

CIGAR string
215H336M2N2911MN857MN305MN2592MN2MD810MN345M mismatches: 7 - insertions: 0 - deletions: 1
Pan troglodytes
Pan troglodytes
Public DB hit
GI:332814608
XM_003309282
1 of 2 hits reported for Pan troglodytes.

Hit length
8,604 bp

E Value
0E0

BLAST Score
14,827.9 bits

Similarity

99.44%

Coverage

97.43%

Alignment (schematic)

SEQ ID NO 3

97.43% cov
XM_003309282

94.93% cov

Alignment Length
8,170 bp

CIGAR string
215H336M2N390MN35MN497MN65MN65MN305MN191MN209MN239MN110MN278MN659MN137MN7MN33MN8MN65MN459MN305MN358MN26MN257MN29MN113MN113MN269MN413MN248MN80MN139MN331MN50MN46M4I82MN24MN2MD432MN26MN5MD214MN237MN237M mismatches: 40 - insertions: 4 - deletions: 2
Pongo abelii
Pongo abelii
Public DB hit
GI:297668754
XM_002812545
1 of 2 hits reported for Pongo abelii.

Hit length
8,416 bp

E Value
0E0

BLAST Score
14,586 bits

Similarity

99.03%

Coverage

97.04%

Alignment (schematic)

SEQ ID NO 3

97.04% cov
XM_002812545

96.68% cov

Alignment Length
8,138 bp
Nomascus leucogenys
Nomascus leucogenys
Public DB hit
GI:332234085
XM_003266191
1 of 2 hits reported for Nomascus leucogenys.

Hit length
8,604 bp

E Value
0E0

BLAST Score
14,539.8 bits

Similarity

98.81%

Coverage

97.43%

Alignment (schematic)

SEQ ID NO 3

97.43% cov
XM_003266191

94.86% cov

Alignment Length
8,168 bp
Macaca mulatta
Macaca mulatta
Public DB hit
GI:297264199
XM_001101023

Hit length
8,223 bp

E Value
0E0

BLAST Score
14,229.6 bits

Similarity

98.26%

Coverage

97.04%

Alignment (schematic)

SEQ ID NO 3

97.04% cov
XM_001101023

98.86% cov

Alignment Length
8,141 bp
Callithrix jacchus
Callithrix jacchus
Public DB hit
GI:296204647
XM_002749372
1 of 2 hits reported for Callithrix jacchus.

Hit length
8,136 bp

E Value
0E0

BLAST Score
13,437.3 bits

Similarity

96.49%

Coverage

97.04%

Alignment (schematic)

SEQ ID NO 3

97.04% cov
XM_002749372

100% cov

Alignment Length
8,150 bp

Occurrence

11 times in PatSeqDB

in 2 extended families
(2 referenced in claims)
in 3 simple families
(3 referenced in claims)
in 11 documents

Tools

SEQ ID NO

Length

2,009

Sequence Type

peptide

Locations

Summary

Declared organism

Homo sapiens

Determined organism

Homo sapiens
Homo sapiens
Public DB hit
GI:23978418
BAC21101
1 of 2 hits reported for Homo sapiens.

Hit length
2,009 aa

E Value
0E0

BLAST Score
4,150.5 bits

Similarity

99.95%

Coverage

100%

Alignment (schematic)

SEQ ID NO 4

100% cov
BAC21101

100% cov

Alignment Length
2,009 aa

CIGAR string
95MN1256MN101MN554M mismatches: 3 - insertions: 0 - deletions: 0
Pan troglodytes
Pan troglodytes
Public DB hit
GI:332814609
XP_003309330
1 of 2 hits reported for Pan troglodytes.

Hit length
2,009 aa

E Value
0E0

BLAST Score
4,149 bits

Similarity

99.9%

Coverage

100%

Alignment (schematic)

SEQ ID NO 4

100% cov
XP_003309330

100% cov

Alignment Length
2,009 aa

CIGAR string
95MN1066MN189MN101MN554M mismatches: 4 - insertions: 0 - deletions: 0
Nomascus leucogenys
Nomascus leucogenys
Public DB hit
GI:332234086
XP_003266239

Hit length
2,009 aa

E Value
0E0

BLAST Score
4,147.4 bits

Similarity

99.85%

Coverage

100%

Alignment (schematic)

SEQ ID NO 4

100% cov
XP_003266239

100% cov

Alignment Length
2,009 aa
Pongo abelii
Pongo abelii
Public DB hit
GI:297668755
XP_002812591

Hit length
2,009 aa

E Value
0E0

BLAST Score
4,142 bits

Similarity

99.8%

Coverage

100%

Alignment (schematic)

SEQ ID NO 4

100% cov
XP_002812591

100% cov

Alignment Length
2,009 aa
Callithrix jacchus
Callithrix jacchus
Public DB hit
GI:296204648
XP_002749418

Hit length
2,009 aa

E Value
0E0

BLAST Score
4,132.8 bits

Similarity

99.6%

Coverage

100%

Alignment (schematic)

SEQ ID NO 4

100% cov
XP_002749418

100% cov

Alignment Length
2,009 aa
Oryctolagus cuniculus
Oryctolagus cuniculus
Public DB hit
GI:291391665
XP_002712295

Hit length
2,009 aa

E Value
0E0

BLAST Score
4,112 bits

Similarity

99.4%

Coverage

100%

Alignment (schematic)

SEQ ID NO 4

100% cov
XP_002712295

100% cov

Alignment Length
2,009 aa
Canis lupus familiaris
Canis lupus familiaris
Public DB hit
GI:74004474
XP_535941

Hit length
2,009 aa

E Value
0E0

BLAST Score
4,110.1 bits

Similarity

99.4%

Coverage

100%

Alignment (schematic)

SEQ ID NO 4

100% cov
XP_535941

100% cov

Alignment Length
2,009 aa
Mus musculus
Mus musculus
Public DB hit
GI:123857421
CAM17351

Hit length
2,009 aa

E Value
0E0

BLAST Score
4,103.5 bits

Similarity

99.55%

Coverage

100%

Alignment (schematic)

SEQ ID NO 4

100% cov
CAM17351

100% cov

Alignment Length
2,009 aa
Bos taurus
Bos taurus
Public DB hit
GI:119887596
XP_001252668

Hit length
2,009 aa

E Value
0E0

BLAST Score
4,100.1 bits

Similarity

99.3%

Coverage

100%

Alignment (schematic)

SEQ ID NO 4

100% cov
XP_001252668

100% cov

Alignment Length
2,009 aa
Rattus norvegicus
Rattus norvegicus
Public DB hit
GI:13540709
NP_110502
1 of 2 hits reported for Rattus norvegicus.

Hit length
2,009 aa

E Value
0E0

BLAST Score
4,097 bits

Similarity

99.35%

Coverage

100%

Alignment (schematic)

SEQ ID NO 4

100% cov
NP_110502

100% cov

Alignment Length
2,009 aa
Macaca mulatta
Macaca mulatta
Public DB hit
GI:109099924
XP_001101023

Hit length
2,008 aa

E Value
0E0

BLAST Score
3,969.5 bits

Similarity

99.8%

Coverage

100%

Alignment (schematic)

SEQ ID NO 4

100% cov
XP_001101023

100% cov

Alignment Length
2,009 aa

Occurrence

11 times in PatSeqDB

in 2 extended families
(2 referenced in claims)
in 3 simple families
(2 referenced in claims)
in 11 documents

Tools

SEQ ID NO

Length

8,381

Sequence Type

DNA

Locations

Summary

Declared organism

Homo sapiens

Determined organism

Homo sapiens
Homo sapiens
Public DB hit
GI:320461721
NM_001202435
1 of 4 hits reported for Homo sapiens.

Hit length
8,342 bp

E Value
0E0

BLAST Score
15,034.7 bits

Similarity

99.9%

Coverage

97.43%

Alignment (schematic)

SEQ ID NO 5

97.43% cov
NM_001202435

97.88% cov

Alignment Length
8,166 bp

CIGAR string
215H336M2N2911MN1163MN604MN1987MN2MD810MN345M mismatches: 7 - insertions: 0 - deletions: 1
Pan troglodytes
Pan troglodytes
Public DB hit
GI:332814608
XM_003309282
1 of 2 hits reported for Pan troglodytes.

Hit length
8,604 bp

E Value
0E0

BLAST Score
14,827.9 bits

Similarity

99.44%

Coverage

97.43%

Alignment (schematic)

SEQ ID NO 5

97.43% cov
XM_003309282

94.93% cov

Alignment Length
8,170 bp

CIGAR string
215H336M2N390MN35MN497MN65MN65MN305MN191MN209MN239MN110MN278MN659MN137MN7MN33MN8MN65MN765MN358MN26MN218MN38MN29MN113MN113MN269MN413MN248MN80MN139MN331MN50MN46M4I82MN24MN2MD432MN26MN5MD214MN237MN237M mismatches: 40 - insertions: 4 - deletions: 2
Pongo abelii
Pongo abelii
Public DB hit
GI:297668754
XM_002812545
1 of 2 hits reported for Pongo abelii.

Hit length
8,416 bp

E Value
0E0

BLAST Score
14,586 bits

Similarity

99.03%

Coverage

97.04%

Alignment (schematic)

SEQ ID NO 5

97.04% cov
XM_002812545

96.68% cov

Alignment Length
8,138 bp
Nomascus leucogenys
Nomascus leucogenys
Public DB hit
GI:332234085
XM_003266191
1 of 2 hits reported for Nomascus leucogenys.

Hit length
8,604 bp

E Value
0E0

BLAST Score
14,539.8 bits

Similarity

98.81%

Coverage

97.43%

Alignment (schematic)

SEQ ID NO 5

97.43% cov
XM_003266191

94.86% cov

Alignment Length
8,168 bp
Macaca mulatta
Macaca mulatta
Public DB hit
GI:297264199
XM_001101023

Hit length
8,223 bp

E Value
0E0

BLAST Score
14,229.6 bits

Similarity

98.26%

Coverage

97.04%

Alignment (schematic)

SEQ ID NO 5

97.04% cov
XM_001101023

98.86% cov

Alignment Length
8,141 bp
Callithrix jacchus
Callithrix jacchus
Public DB hit
GI:296204647
XM_002749372
1 of 2 hits reported for Callithrix jacchus.

Hit length
8,136 bp

E Value
0E0

BLAST Score
13,437.3 bits

Similarity

96.49%

Coverage

97.04%

Alignment (schematic)

SEQ ID NO 5

97.04% cov
XM_002749372

100% cov

Alignment Length
8,150 bp

Occurrence

11 times in PatSeqDB

in 2 extended families
(2 referenced in claims)
in 3 simple families
(3 referenced in claims)
in 11 documents

Tools

SEQ ID NO

Length

2,009

Sequence Type

peptide

Locations

Summary

Declared organism

Homo sapiens

Determined organism

Homo sapiens
Homo sapiens
Public DB hit
GI:23978418
BAC21101
1 of 2 hits reported for Homo sapiens.

Hit length
2,009 aa

E Value
0E0

BLAST Score
4,152.4 bits

Similarity

99.95%

Coverage

100%

Alignment (schematic)

SEQ ID NO 6

100% cov
BAC21101

100% cov

Alignment Length
2,009 aa

CIGAR string
95MN1358MN200MN353M mismatches: 3 - insertions: 0 - deletions: 0
Pan troglodytes
Pan troglodytes
Public DB hit
GI:332814609
XP_003309330
1 of 2 hits reported for Pan troglodytes.

Hit length
2,009 aa

E Value
0E0

BLAST Score
4,150.9 bits

Similarity

99.9%

Coverage

100%

Alignment (schematic)

SEQ ID NO 6

100% cov
XP_003309330

100% cov

Alignment Length
2,009 aa

CIGAR string
95MN1066MN291MN200MN353M mismatches: 4 - insertions: 0 - deletions: 0
Nomascus leucogenys
Nomascus leucogenys
Public DB hit
GI:332234086
XP_003266239

Hit length
2,009 aa

E Value
0E0

BLAST Score
4,149.4 bits

Similarity

99.85%

Coverage

100%

Alignment (schematic)

SEQ ID NO 6

100% cov
XP_003266239

100% cov

Alignment Length
2,009 aa
Pongo abelii
Pongo abelii
Public DB hit
GI:297668755
XP_002812591

Hit length
2,009 aa

E Value
0E0

BLAST Score
4,144 bits

Similarity

99.8%

Coverage

100%

Alignment (schematic)

SEQ ID NO 6

100% cov
XP_002812591

100% cov

Alignment Length
2,009 aa
Callithrix jacchus
Callithrix jacchus
Public DB hit
GI:296204648
XP_002749418

Hit length
2,009 aa

E Value
0E0

BLAST Score
4,132 bits

Similarity

99.6%

Coverage

100%

Alignment (schematic)

SEQ ID NO 6

100% cov
XP_002749418

100% cov

Alignment Length
2,009 aa
Oryctolagus cuniculus
Oryctolagus cuniculus
Public DB hit
GI:291391665
XP_002712295

Hit length
2,009 aa

E Value
0E0

BLAST Score
4,112 bits

Similarity

99.4%

Coverage

100%

Alignment (schematic)

SEQ ID NO 6

100% cov
XP_002712295

100% cov

Alignment Length
2,009 aa
Canis lupus familiaris
Canis lupus familiaris
Public DB hit
GI:74004474
XP_535941

Hit length
2,009 aa

E Value
0E0

BLAST Score
4,111.6 bits

Similarity

99.4%

Coverage

100%

Alignment (schematic)

SEQ ID NO 6

100% cov
XP_535941

100% cov

Alignment Length
2,009 aa
Mus musculus
Mus musculus
Public DB hit
GI:123857421
CAM17351

Hit length
2,009 aa

E Value
0E0

BLAST Score
4,103.5 bits

Similarity

99.55%

Coverage

100%

Alignment (schematic)

SEQ ID NO 6

100% cov
CAM17351

100% cov

Alignment Length
2,009 aa
Bos taurus
Bos taurus
Public DB hit
GI:119887596
XP_001252668

Hit length
2,009 aa

E Value
0E0

BLAST Score
4,099.7 bits

Similarity

99.3%

Coverage

100%

Alignment (schematic)

SEQ ID NO 6

100% cov
XP_001252668

100% cov

Alignment Length
2,009 aa
Rattus norvegicus
Rattus norvegicus
Public DB hit
GI:13540709
NP_110502
1 of 2 hits reported for Rattus norvegicus.

Hit length
2,009 aa

E Value
0E0

BLAST Score
4,097 bits

Similarity

99.35%

Coverage

100%

Alignment (schematic)

SEQ ID NO 6

100% cov
NP_110502

100% cov

Alignment Length
2,009 aa
Macaca mulatta
Macaca mulatta
Public DB hit
GI:109099924
XP_001101023

Hit length
2,008 aa

E Value
0E0

BLAST Score
3,967.5 bits

Similarity

99.8%

Coverage

100%

Alignment (schematic)

SEQ ID NO 6

100% cov
XP_001101023

100% cov

Alignment Length
2,009 aa

Occurrence

11 times in PatSeqDB

in 2 extended families
(2 referenced in claims)
in 3 simple families
(2 referenced in claims)
in 11 documents

Tools

SEQ ID NO

Length

8,381

Sequence Type

DNA

Locations

Summary

Declared organism

Homo sapiens

Determined organism

Homo sapiens
Homo sapiens
Public DB hit
GI:320461721
NM_001202435
1 of 4 hits reported for Homo sapiens.

Hit length
8,342 bp

E Value
0E0

BLAST Score
15,034.7 bits

Similarity

99.9%

Coverage

97.43%

Alignment (schematic)

SEQ ID NO 7

97.43% cov
NM_001202435

97.88% cov

Alignment Length
8,166 bp

CIGAR string
215H336M2N2234MN676MN1163MN2592MN2MD810MN345M mismatches: 7 - insertions: 0 - deletions: 1
Pan troglodytes
Pan troglodytes
Public DB hit
GI:332814608
XM_003309282
1 of 2 hits reported for Pan troglodytes.

Hit length
8,604 bp

E Value
0E0

BLAST Score
14,827.9 bits

Similarity

99.44%

Coverage

97.43%

Alignment (schematic)

SEQ ID NO 7

97.43% cov
XM_003309282

94.93% cov

Alignment Length
8,170 bp

CIGAR string
215H336M2N390MN35MN497MN65MN65MN305MN191MN209MN239MN110MN118MN159MN659MN137MN7MN33MN8MN65MN765MN358MN26MN257MN29MN113MN113MN269MN413MN248MN80MN139MN331MN50MN46M4I82MN24MN2MD432MN26MN5MD214MN237MN237M mismatches: 40 - insertions: 4 - deletions: 2
Pongo abelii
Pongo abelii
Public DB hit
GI:297668754
XM_002812545
1 of 2 hits reported for Pongo abelii.

Hit length
8,416 bp

E Value
0E0

BLAST Score
14,586 bits

Similarity

99.03%

Coverage

97.04%

Alignment (schematic)

SEQ ID NO 7

97.04% cov
XM_002812545

96.68% cov

Alignment Length
8,138 bp
Nomascus leucogenys
Nomascus leucogenys
Public DB hit
GI:332234085
XM_003266191
1 of 2 hits reported for Nomascus leucogenys.

Hit length
8,604 bp

E Value
0E0

BLAST Score
14,539.8 bits

Similarity

98.81%

Coverage

97.43%

Alignment (schematic)

SEQ ID NO 7

97.43% cov
XM_003266191

94.86% cov

Alignment Length
8,168 bp
Macaca mulatta
Macaca mulatta
Public DB hit
GI:297264199
XM_001101023

Hit length
8,223 bp

E Value
0E0

BLAST Score
14,229.6 bits

Similarity

98.26%

Coverage

97.04%

Alignment (schematic)

SEQ ID NO 7

97.04% cov
XM_001101023

98.86% cov

Alignment Length
8,141 bp
Callithrix jacchus
Callithrix jacchus
Public DB hit
GI:296204647
XM_002749372
1 of 2 hits reported for Callithrix jacchus.

Hit length
8,136 bp

E Value
0E0

BLAST Score
13,437.3 bits

Similarity

96.49%

Coverage

97.04%

Alignment (schematic)

SEQ ID NO 7

97.04% cov
XM_002749372

100% cov

Alignment Length
8,150 bp

Occurrence

11 times in PatSeqDB

in 2 extended families
(2 referenced in claims)
in 3 simple families
(3 referenced in claims)
in 11 documents

Tools

SEQ ID NO

Length

8,381

Sequence Type

DNA

Locations

Summary

Declared organism

Homo sapiens

Determined organism

Homo sapiens
Homo sapiens
Public DB hit
GI:320461721
NM_001202435
1 of 4 hits reported for Homo sapiens.

Hit length
8,342 bp

E Value
0E0

BLAST Score
15,034.7 bits

Similarity

99.9%

Coverage

97.43%

Alignment (schematic)

SEQ ID NO 8

97.43% cov
NM_001202435

97.88% cov

Alignment Length
8,166 bp

CIGAR string
215H336M2N2601MN309MN1163MN2592MN2MD810MN345M mismatches: 7 - insertions: 0 - deletions: 1
Pan troglodytes
Pan troglodytes
Public DB hit
GI:332814608
XM_003309282
1 of 2 hits reported for Pan troglodytes.

Hit length
8,604 bp

E Value
0E0

BLAST Score
14,827.9 bits

Similarity

99.44%

Coverage

97.43%

Alignment (schematic)

SEQ ID NO 8

97.43% cov
XM_003309282

94.93% cov

Alignment Length
8,170 bp

CIGAR string
215H336M2N390MN35MN497MN65MN65MN305MN191MN209MN239MN110MN278MN206MN452MN137MN7MN33MN8MN65MN765MN358MN26MN257MN29MN113MN113MN269MN413MN248MN80MN139MN331MN50MN46M4I82MN24MN2MD432MN26MN5MD214MN237MN237M mismatches: 40 - insertions: 4 - deletions: 2
Pongo abelii
Pongo abelii
Public DB hit
GI:297668754
XM_002812545
1 of 2 hits reported for Pongo abelii.

Hit length
8,416 bp

E Value
0E0

BLAST Score
14,586 bits

Similarity

99.03%

Coverage

97.04%

Alignment (schematic)

SEQ ID NO 8

97.04% cov
XM_002812545

96.68% cov

Alignment Length
8,138 bp
Nomascus leucogenys
Nomascus leucogenys
Public DB hit
GI:332234085
XM_003266191
1 of 2 hits reported for Nomascus leucogenys.

Hit length
8,604 bp

E Value
0E0

BLAST Score
14,539.8 bits

Similarity

98.81%

Coverage

97.43%

Alignment (schematic)

SEQ ID NO 8

97.43% cov
XM_003266191

94.86% cov

Alignment Length
8,168 bp
Macaca mulatta
Macaca mulatta
Public DB hit
GI:297264199
XM_001101023

Hit length
8,223 bp

E Value
0E0

BLAST Score
14,229.6 bits

Similarity

98.26%

Coverage

97.04%

Alignment (schematic)

SEQ ID NO 8

97.04% cov
XM_001101023

98.86% cov

Alignment Length
8,141 bp
Callithrix jacchus
Callithrix jacchus
Public DB hit
GI:296204647
XM_002749372
1 of 2 hits reported for Callithrix jacchus.

Hit length
8,136 bp

E Value
0E0

BLAST Score
13,437.3 bits

Similarity

96.49%

Coverage

97.04%

Alignment (schematic)

SEQ ID NO 8

97.04% cov
XM_002749372

100% cov

Alignment Length
8,150 bp

Occurrence

11 times in PatSeqDB

in 2 extended families
(2 referenced in claims)
in 3 simple families
(3 referenced in claims)
in 11 documents

Tools

SEQ ID NO

Length

8,381

Sequence Type

DNA

Locations

Summary

Declared organism

Homo sapiens

Determined organism

Homo sapiens
Homo sapiens
Public DB hit
GI:320461721
NM_001202435
1 of 4 hits reported for Homo sapiens.

Hit length
8,342 bp

E Value
0E0

BLAST Score
15,045.8 bits

Similarity

99.93%

Coverage

97.43%

Alignment (schematic)

SEQ ID NO 9

97.43% cov
NM_001202435

97.88% cov

Alignment Length
8,166 bp

CIGAR string
215H336M2N4075MN2592MN2MD810MN345M mismatches: 5 - insertions: 0 - deletions: 1
Pan troglodytes
Pan troglodytes
Public DB hit
GI:332814608
XM_003309282
1 of 2 hits reported for Pan troglodytes.

Hit length
8,604 bp

E Value
0E0

BLAST Score
14,827.9 bits

Similarity

99.44%

Coverage

97.43%

Alignment (schematic)

SEQ ID NO 9

97.43% cov
XM_003309282

94.93% cov

Alignment Length
8,170 bp

CIGAR string
215H336M2N390MN35MN497MN65MN65MN305MN191MN209MN239MN110MN278MN516MN142MN137MN7MN33MN8MN65MN765MN358MN26MN257MN29MN113MN113MN269MN413MN248MN80MN139MN331MN50MN46M4I82MN24MN2MD432MN26MN5MD214MN237MN237M mismatches: 40 - insertions: 4 - deletions: 2
Pongo abelii
Pongo abelii
Public DB hit
GI:297668754
XM_002812545
1 of 2 hits reported for Pongo abelii.

Hit length
8,416 bp

E Value
0E0

BLAST Score
14,586 bits

Similarity

99.03%

Coverage

97.04%

Alignment (schematic)

SEQ ID NO 9

97.04% cov
XM_002812545

96.68% cov

Alignment Length
8,138 bp
Nomascus leucogenys
Nomascus leucogenys
Public DB hit
GI:332234085
XM_003266191
1 of 2 hits reported for Nomascus leucogenys.

Hit length
8,604 bp

E Value
0E0

BLAST Score
14,539.8 bits

Similarity

98.81%

Coverage

97.43%

Alignment (schematic)

SEQ ID NO 9

97.43% cov
XM_003266191

94.86% cov

Alignment Length
8,168 bp
Macaca mulatta
Macaca mulatta
Public DB hit
GI:297264199
XM_001101023

Hit length
8,223 bp

E Value
0E0

BLAST Score
14,229.6 bits

Similarity

98.26%

Coverage

97.04%

Alignment (schematic)

SEQ ID NO 9

97.04% cov
XM_001101023

98.86% cov

Alignment Length
8,141 bp
Callithrix jacchus
Callithrix jacchus
Public DB hit
GI:296204647
XM_002749372
1 of 2 hits reported for Callithrix jacchus.

Hit length
8,136 bp

E Value
0E0

BLAST Score
13,437.3 bits

Similarity

96.49%

Coverage

97.04%

Alignment (schematic)

SEQ ID NO 9

97.04% cov
XM_002749372

100% cov

Alignment Length
8,150 bp

Occurrence

11 times in PatSeqDB

in 2 extended families
(2 referenced in claims)
in 3 simple families
(3 referenced in claims)
in 11 documents

Tools

SEQ ID NO

Length

2,009

Sequence Type

peptide

Locations

Summary

Declared organism

Homo sapiens

Determined organism

Homo sapiens
Homo sapiens
Public DB hit
GI:260166633
NP_001159435
1 of 2 hits reported for Homo sapiens.

Hit length
2,009 aa

E Value
0E0

BLAST Score
4,151.7 bits

Similarity

99.95%

Coverage

100%

Alignment (schematic)

SEQ ID NO 10

100% cov
NP_001159435

100% cov

Alignment Length
2,009 aa

CIGAR string
95MN1358MN554M mismatches: 2 - insertions: 0 - deletions: 0
Pan troglodytes
Pan troglodytes
Public DB hit
GI:332814609
XP_003309330
1 of 2 hits reported for Pan troglodytes.

Hit length
2,009 aa

E Value
0E0

BLAST Score
4,148.2 bits

Similarity

99.85%

Coverage

100%

Alignment (schematic)

SEQ ID NO 10

100% cov
XP_003309330

100% cov

Alignment Length
2,009 aa

CIGAR string
95MN970MN95MN291MN554M mismatches: 4 - insertions: 0 - deletions: 0
Nomascus leucogenys
Nomascus leucogenys
Public DB hit
GI:332234086
XP_003266239

Hit length
2,009 aa

E Value
0E0

BLAST Score
4,147 bits

Similarity

99.8%

Coverage

100%

Alignment (schematic)

SEQ ID NO 10

100% cov
XP_003266239

100% cov

Alignment Length
2,009 aa
Pongo abelii
Pongo abelii
Public DB hit
GI:297668755
XP_002812591

Hit length
2,009 aa

E Value
0E0

BLAST Score
4,141.7 bits

Similarity

99.75%

Coverage

100%

Alignment (schematic)

SEQ ID NO 10

100% cov
XP_002812591

100% cov

Alignment Length
2,009 aa
Callithrix jacchus
Callithrix jacchus
Public DB hit
GI:296204648
XP_002749418

Hit length
2,009 aa

E Value
0E0

BLAST Score
4,134.3 bits

Similarity

99.55%

Coverage

100%

Alignment (schematic)

SEQ ID NO 10

100% cov
XP_002749418

100% cov

Alignment Length
2,009 aa
Oryctolagus cuniculus
Oryctolagus cuniculus
Public DB hit
GI:291391665
XP_002712295

Hit length
2,009 aa

E Value
0E0

BLAST Score
4,115.1 bits

Similarity

99.45%

Coverage

100%

Alignment (schematic)

SEQ ID NO 10

100% cov
XP_002712295

100% cov

Alignment Length
2,009 aa
Canis lupus familiaris
Canis lupus familiaris
Public DB hit
GI:74004474
XP_535941

Hit length
2,009 aa

E Value
0E0

BLAST Score
4,109.3 bits

Similarity

99.35%

Coverage

100%

Alignment (schematic)

SEQ ID NO 10

100% cov
XP_535941

100% cov

Alignment Length
2,009 aa
Mus musculus
Mus musculus
Public DB hit
GI:123857421
CAM17351

Hit length
2,009 aa

E Value
0E0

BLAST Score
4,102.7 bits

Similarity

99.5%

Coverage

100%

Alignment (schematic)

SEQ ID NO 10

100% cov
CAM17351

100% cov

Alignment Length
2,009 aa
Bos taurus
Bos taurus
Public DB hit
GI:119887596
XP_001252668

Hit length
2,009 aa

E Value
0E0

BLAST Score
4,099.3 bits

Similarity

99.25%

Coverage

100%

Alignment (schematic)

SEQ ID NO 10

100% cov
XP_001252668

100% cov

Alignment Length
2,009 aa
Rattus norvegicus
Rattus norvegicus
Public DB hit
GI:13540709
NP_110502
1 of 2 hits reported for Rattus norvegicus.

Hit length
2,009 aa

E Value
0E0

BLAST Score
4,096.6 bits

Similarity

99.3%

Coverage

100%

Alignment (schematic)

SEQ ID NO 10

100% cov
NP_110502

100% cov

Alignment Length
2,009 aa
Macaca mulatta
Macaca mulatta
Public DB hit
GI:109099924
XP_001101023

Hit length
2,008 aa

E Value
0E0

BLAST Score
3,967.9 bits

Similarity

99.75%

Coverage

100%

Alignment (schematic)

SEQ ID NO 10

100% cov
XP_001101023

100% cov

Alignment Length
2,009 aa

Occurrence

11 times in PatSeqDB

in 2 extended families
(2 referenced in claims)
in 3 simple families
(2 referenced in claims)
in 11 documents

Tools

179 sequences found in this patent (in total)

Filter sequences

Displaying 1 - 10 of 179 sequences

Homo sapiens

Public DB hit

Hit length

E Value

BLAST Score

Similarity

Coverage

Alignment (schematic)

Alignment Length

CIGAR string

Pan troglodytes

Public DB hit

Hit length

E Value

BLAST Score

Similarity

Coverage

Alignment (schematic)

Alignment Length

CIGAR string

Pongo abelii

Public DB hit

Hit length

E Value

BLAST Score

Similarity

Coverage

Alignment (schematic)

Alignment Length

Nomascus leucogenys

Public DB hit

Hit length

E Value

BLAST Score

Similarity

Coverage

Alignment (schematic)

Alignment Length

Macaca mulatta

Public DB hit

Hit length

E Value

BLAST Score

Similarity

Coverage

Alignment (schematic)

Alignment Length

Callithrix jacchus

Public DB hit

Hit length

E Value

BLAST Score

Similarity

Coverage

Alignment (schematic)

Alignment Length

Homo sapiens

Public DB hit

Hit length

E Value

BLAST Score

Similarity

Coverage

Alignment (schematic)

Alignment Length

CIGAR string

Pan troglodytes

Public DB hit

Hit length

E Value

BLAST Score

Similarity

Coverage

Alignment (schematic)

Alignment Length

CIGAR string

Nomascus leucogenys