Methods And Compositions For Predicting Cancer Therapy Response

Data obtained from: WIPO-PCT
112 sequences found in this patent (in total)

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Download sequences in fasta format: 35 peptides 77 DNAs

Displaying 1 - 10 of 112 sequences

SEQ ID NO
Length
Sequence Type
Locations
Declared organism
Determined organism
Occurrence
Tools
SEQ ID NO
1
Length
3,633
Sequence Type
DNA
Locations
Fulltext
Declared organism
Homo sapiens
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:41327737
      NM_005228
      1 of 10 hits reported for Homo sapiens.
    • Hit length
      5,616 bp
    • E Value
      0E0
    • BLAST Score
      6,710 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      NM_005228
      64.69% cov
    • Alignment Length
      3,633 bp
    • CIGAR string
      3633M mismatches: 0 - insertions: 0 - deletions: 0
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:61354744
      AY888106
      1 of 4 hits reported for synthetic construct.
    • Hit length
      3,633 bp
    • E Value
      0E0
    • BLAST Score
      6,706.3 bits
    • Similarity
      100%
    • Coverage
      99.94%
    • Alignment (schematic)

      SEQ ID NO 1
      99.94% cov
      AY888106
      99.94% cov
    • Alignment Length
      3,631 bp
    • CIGAR string
      3631M2H mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332865275
      XM_519102
      1 of 3 hits reported for Pan troglodytes.
    • Hit length
      10,003 bp
    • E Value
      0E0
    • BLAST Score
      6,560.4 bits
    • Similarity
      99.26%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XM_519102
      36.32% cov
    • Alignment Length
      3,633 bp
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332251848
      XM_003275013
    • Hit length
      7,517 bp
    • E Value
      0E0
    • BLAST Score
      6,133.8 bits
    • Similarity
      97.91%
    • Coverage
      97.58%
    • Alignment (schematic)

      SEQ ID NO 1
      97.58% cov
      XM_003275013
      47.12% cov
    • Alignment Length
      3,545 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297288278
      XM_001107305
    • Hit length
      3,618 bp
    • E Value
      0E0
    • BLAST Score
      5,642.6 bits
    • Similarity
      97.8%
    • Coverage
      90.04%
    • Alignment (schematic)

      SEQ ID NO 1
      90.04% cov
      XM_001107305
      90.41% cov
    • Alignment Length
      3,271 bp
Occurrence
54 times in PatSeqDB
Tools
SEQ ID NO
2
Length
1,210
Sequence Type
peptide
Locations
Fulltext
Declared organism
Homo sapiens
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:29725609
      NP_005219
      1 of 8 hits reported for Homo sapiens.
    • Hit length
      1,210 aa
    • E Value
      0E0
    • BLAST Score
      2,523.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NP_005219
      100% cov
    • Alignment Length
      1,210 aa
    • CIGAR string
      1210M mismatches: 0 - insertions: 0 - deletions: 0
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:61354647
      AAX41033
      1 of 2 hits reported for synthetic construct.
    • Hit length
      1,211 aa
    • E Value
      0E0
    • BLAST Score
      2,522.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      AAX41033
      99.92% cov
    • Alignment Length
      1,210 aa
    • CIGAR string
      1210M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332865276
      XP_519102
      1 of 3 hits reported for Pan troglodytes.
    • Hit length
      1,210 aa
    • E Value
      0E0
    • BLAST Score
      2,518.8 bits
    • Similarity
      99.92%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_519102
      100% cov
    • Alignment Length
      1,210 aa
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332251849
      XP_003275061
    • Hit length
      1,156 aa
    • E Value
      0E0
    • BLAST Score
      2,342 bits
    • Similarity
      99.48%
    • Coverage
      95.62%
    • Alignment (schematic)

      SEQ ID NO 2
      95.62% cov
      XP_003275061
      100% cov
    • Alignment Length
      1,157 aa
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:46560582
      NP_997538
      1 of 3 hits reported for Mus musculus.
    • Hit length
      1,210 aa
    • E Value
      0E0
    • BLAST Score
      2,272.3 bits
    • Similarity
      94.88%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NP_997538
      100% cov
    • Alignment Length
      1,212 aa
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:194209568
      XP_001497780
    • Hit length
      1,239 aa
    • E Value
      0E0
    • BLAST Score
      2,270 bits
    • Similarity
      96.11%
    • Coverage
      97.69%
    • Alignment (schematic)

      SEQ ID NO 2
      97.69% cov
      XP_001497780
      95.32% cov
    • Alignment Length
      1,182 aa
Occurrence
1279 times in PatSeqDB
Tools
SEQ ID NO
3
Length
119
Sequence Type
peptide
Locations
Fulltext
Declared organism
Homo sapiens
Determined organism
Occurrence
3 times in PatSeqDB
Tools
SEQ ID NO
4
Length
119
Sequence Type
peptide
Locations
Fulltext
Declared organism
Homo sapiens
Determined organism
Occurrence
3 times in PatSeqDB
Tools
SEQ ID NO
5
Length
119
Sequence Type
DNA
Locations
Undetermined
Declared organism
Homo sapiens
Determined organism
Occurrence
3 times in PatSeqDB
Tools
SEQ ID NO
6
Length
119
Sequence Type
DNA
Locations
Fulltext
Declared organism
Homo sapiens
Determined organism
Occurrence
3 times in PatSeqDB
Tools
SEQ ID NO
7
Length
119
Sequence Type
peptide
Locations
Undetermined
Declared organism
Homo sapiens
Determined organism
Occurrence
3 times in PatSeqDB
Tools
SEQ ID NO
8
Length
119
Sequence Type
peptide
Locations
Undetermined
Declared organism
Homo sapiens
Determined organism
Occurrence
3 times in PatSeqDB
Tools
SEQ ID NO
9
Length
119
Sequence Type
DNA
Locations
Undetermined
Declared organism
Homo sapiens
Determined organism
Occurrence
3 times in PatSeqDB
Tools
SEQ ID NO
10
Length
119
Sequence Type
DNA
Locations
Fulltext
Declared organism
Homo sapiens
Determined organism
Occurrence
3 times in PatSeqDB
Tools

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