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Search for Biological Sequences disclosed in Patents

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Data obtained from: DDBJ Pat NCBI GenBank USPTO Fulltext EMBL-EBI Pat
85 sequences found in this patent (in total)

Displaying 1 - 10 of 85 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
21
Type
nucleotide
Locations
Detailed Description

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:224922786
      NG_011571
      1 of 3 hits reported for Homo sapiens.
    • Hit length
      469,379 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      NG_011571
      0% cov
    • Alignment Length
      21 bp
    • CIGAR string
      21M mismatches: 0 - insertions: 0 - deletions: 0
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:334358890
      NM_001199305
      1 of 6 hits reported for Mus musculus.
    • Hit length
      10,623 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      NM_001199305
      0.2% cov
    • Alignment Length
      21 bp
    • CIGAR string
      21M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332822987
      XM_003311029
      1 of 4 hits reported for Pan troglodytes.
    • Hit length
      10,591 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XM_003311029
      0.2% cov
    • Alignment Length
      21 bp
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332228816
      XM_003263540
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      3,244 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XM_003263540
      0.65% cov
    • Alignment Length
      21 bp
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301775458
      XM_002923104
      1 of 2 hits reported for Ailuropoda melanoleuca.
    • Hit length
      2,511 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XM_002923104
      0.84% cov
    • Alignment Length
      21 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297677211
      XM_002816453
      1 of 3 hits reported for Pongo abelii.
    • Hit length
      10,578 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XM_002816453
      0.2% cov
    • Alignment Length
      21 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297290116
      XR_092070
    • Hit length
      3,246 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XR_092070
      0.65% cov
    • Alignment Length
      21 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296197357
      XM_002746204
    • Hit length
      2,485 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XM_002746204
      0.85% cov
    • Alignment Length
      21 bp
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:149731982
      XM_001496252
    • Hit length
      2,430 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XM_001496252
      0.86% cov
    • Alignment Length
      21 bp
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:74004107
      XM_545354
    • Hit length
      2,525 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XM_545354
      0.83% cov
    • Alignment Length
      21 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:313883569
      HQ258517
    • Hit length
      2,482 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      HQ258517
      0.85% cov
    • Alignment Length
      21 bp
Occurrence
69 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
21
Type
nucleotide
Locations
Detailed Description

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:224922786
      NG_011571
      1 of 3 hits reported for Homo sapiens.
    • Hit length
      469,379 bp
    • E Value
      1.01E-1
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      95.24%
    • Alignment (schematic)

      SEQ ID NO 2
      95.24% cov
      NG_011571
      0% cov
    • Alignment Length
      20 bp
    • CIGAR string
      1H20M mismatches: 0 - insertions: 0 - deletions: 0
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:334358890
      NM_001199305
      1 of 6 hits reported for Mus musculus.
    • Hit length
      10,623 bp
    • E Value
      1.01E-1
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      95.24%
    • Alignment (schematic)

      SEQ ID NO 2
      95.24% cov
      NM_001199305
      0.19% cov
    • Alignment Length
      20 bp
    • CIGAR string
      1H20M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332822987
      XM_003311029
      1 of 4 hits reported for Pan troglodytes.
    • Hit length
      10,591 bp
    • E Value
      1.01E-1
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      95.24%
    • Alignment (schematic)

      SEQ ID NO 2
      95.24% cov
      XM_003311029
      0.19% cov
    • Alignment Length
      20 bp
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332228816
      XM_003263540
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      3,244 bp
    • E Value
      1.01E-1
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      95.24%
    • Alignment (schematic)

      SEQ ID NO 2
      95.24% cov
      XM_003263540
      0.62% cov
    • Alignment Length
      20 bp
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301775458
      XM_002923104
      1 of 2 hits reported for Ailuropoda melanoleuca.
    • Hit length
      2,511 bp
    • E Value
      1.01E-1
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      95.24%
    • Alignment (schematic)

      SEQ ID NO 2
      95.24% cov
      XM_002923104
      0.8% cov
    • Alignment Length
      20 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297677211
      XM_002816453
      1 of 3 hits reported for Pongo abelii.
    • Hit length
      10,578 bp
    • E Value
      1.01E-1
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      95.24%
    • Alignment (schematic)

      SEQ ID NO 2
      95.24% cov
      XM_002816453
      0.19% cov
    • Alignment Length
      20 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297290116
      XR_092070
    • Hit length
      3,246 bp
    • E Value
      1.01E-1
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      95.24%
    • Alignment (schematic)

      SEQ ID NO 2
      95.24% cov
      XR_092070
      0.62% cov
    • Alignment Length
      20 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296197357
      XM_002746204
    • Hit length
      2,485 bp
    • E Value
      1.01E-1
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      95.24%
    • Alignment (schematic)

      SEQ ID NO 2
      95.24% cov
      XM_002746204
      0.8% cov
    • Alignment Length
      20 bp
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:149731982
      XM_001496252
    • Hit length
      2,430 bp
    • E Value
      1.01E-1
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      95.24%
    • Alignment (schematic)

      SEQ ID NO 2
      95.24% cov
      XM_001496252
      0.82% cov
    • Alignment Length
      20 bp
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:74004107
      XM_545354
    • Hit length
      2,525 bp
    • E Value
      1.01E-1
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      95.24%
    • Alignment (schematic)

      SEQ ID NO 2
      95.24% cov
      XM_545354
      0.79% cov
    • Alignment Length
      20 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:313883569
      HQ258517
    • Hit length
      2,482 bp
    • E Value
      1.01E-1
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      95.24%
    • Alignment (schematic)

      SEQ ID NO 2
      95.24% cov
      HQ258517
      0.81% cov
    • Alignment Length
      20 bp
Occurrence
59 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
3
Length
21
Type
nucleotide
Locations
Detailed Description

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:224922786
      NG_011571
      1 of 3 hits reported for Homo sapiens.
    • Hit length
      469,379 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NG_011571
      0% cov
    • Alignment Length
      21 bp
    • CIGAR string
      21M mismatches: 0 - insertions: 0 - deletions: 0
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:334358890
      NM_001199305
      1 of 6 hits reported for Mus musculus.
    • Hit length
      10,623 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NM_001199305
      0.2% cov
    • Alignment Length
      21 bp
    • CIGAR string
      21M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332822987
      XM_003311029
      1 of 4 hits reported for Pan troglodytes.
    • Hit length
      10,591 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XM_003311029
      0.2% cov
    • Alignment Length
      21 bp
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332228816
      XM_003263540
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      3,244 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XM_003263540
      0.65% cov
    • Alignment Length
      21 bp
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301775458
      XM_002923104
      1 of 2 hits reported for Ailuropoda melanoleuca.
    • Hit length
      2,511 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XM_002923104
      0.84% cov
    • Alignment Length
      21 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297677211
      XM_002816453
      1 of 3 hits reported for Pongo abelii.
    • Hit length
      10,578 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XM_002816453
      0.2% cov
    • Alignment Length
      21 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297290116
      XR_092070
    • Hit length
      3,246 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XR_092070
      0.65% cov
    • Alignment Length
      21 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296197357
      XM_002746204
    • Hit length
      2,485 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XM_002746204
      0.85% cov
    • Alignment Length
      21 bp
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:149731982
      XM_001496252
    • Hit length
      2,430 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XM_001496252
      0.86% cov
    • Alignment Length
      21 bp
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:74004107
      XM_545354
    • Hit length
      2,525 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XM_545354
      0.83% cov
    • Alignment Length
      21 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:313883569
      HQ258517
    • Hit length
      2,482 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      HQ258517
      0.85% cov
    • Alignment Length
      21 bp
Occurrence
69 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
4
Length
21
Type
nucleotide
Locations
Detailed Description

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:224922786
      NG_011571
      1 of 3 hits reported for Homo sapiens.
    • Hit length
      469,379 bp
    • E Value
      1.01E-1
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      95.24%
    • Alignment (schematic)

      SEQ ID NO 4
      95.24% cov
      NG_011571
      0% cov
    • Alignment Length
      20 bp
    • CIGAR string
      1H20M mismatches: 0 - insertions: 0 - deletions: 0
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:334358890
      NM_001199305
      1 of 6 hits reported for Mus musculus.
    • Hit length
      10,623 bp
    • E Value
      1.01E-1
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      95.24%
    • Alignment (schematic)

      SEQ ID NO 4
      95.24% cov
      NM_001199305
      0.19% cov
    • Alignment Length
      20 bp
    • CIGAR string
      1H20M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332822987
      XM_003311029
      1 of 4 hits reported for Pan troglodytes.
    • Hit length
      10,591 bp
    • E Value
      1.01E-1
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      95.24%
    • Alignment (schematic)

      SEQ ID NO 4
      95.24% cov
      XM_003311029
      0.19% cov
    • Alignment Length
      20 bp
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332228816
      XM_003263540
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      3,244 bp
    • E Value
      1.01E-1
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      95.24%
    • Alignment (schematic)

      SEQ ID NO 4
      95.24% cov
      XM_003263540
      0.62% cov
    • Alignment Length
      20 bp
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301775458
      XM_002923104
      1 of 2 hits reported for Ailuropoda melanoleuca.
    • Hit length
      2,511 bp
    • E Value
      1.01E-1
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      95.24%
    • Alignment (schematic)

      SEQ ID NO 4
      95.24% cov
      XM_002923104
      0.8% cov
    • Alignment Length
      20 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297677211
      XM_002816453
      1 of 3 hits reported for Pongo abelii.
    • Hit length
      10,578 bp
    • E Value
      1.01E-1
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      95.24%
    • Alignment (schematic)

      SEQ ID NO 4
      95.24% cov
      XM_002816453
      0.19% cov
    • Alignment Length
      20 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297290116
      XR_092070
    • Hit length
      3,246 bp
    • E Value
      1.01E-1
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      95.24%
    • Alignment (schematic)

      SEQ ID NO 4
      95.24% cov
      XR_092070
      0.62% cov
    • Alignment Length
      20 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296197357
      XM_002746204
    • Hit length
      2,485 bp
    • E Value
      1.01E-1
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      95.24%
    • Alignment (schematic)

      SEQ ID NO 4
      95.24% cov
      XM_002746204
      0.8% cov
    • Alignment Length
      20 bp
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:149731982
      XM_001496252
    • Hit length
      2,430 bp
    • E Value
      1.01E-1
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      95.24%
    • Alignment (schematic)

      SEQ ID NO 4
      95.24% cov
      XM_001496252
      0.82% cov
    • Alignment Length
      20 bp
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:74004107
      XM_545354
    • Hit length
      2,525 bp
    • E Value
      1.01E-1
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      95.24%
    • Alignment (schematic)

      SEQ ID NO 4
      95.24% cov
      XM_545354
      0.79% cov
    • Alignment Length
      20 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:313883569
      HQ258517
    • Hit length
      2,482 bp
    • E Value
      1.01E-1
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      95.24%
    • Alignment (schematic)

      SEQ ID NO 4
      95.24% cov
      HQ258517
      0.81% cov
    • Alignment Length
      20 bp
Occurrence
59 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
5
Length
21
Type
nucleotide
Locations
Undetermined

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:224922786
      NG_011571
      1 of 8 hits reported for Homo sapiens.
    • Hit length
      469,379 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NG_011571
      0% cov
    • Alignment Length
      21 bp
    • CIGAR string
      21M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332822987
      XM_003311029
      1 of 4 hits reported for Pan troglodytes.
    • Hit length
      10,591 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XM_003311029
      0.2% cov
    • Alignment Length
      21 bp
    • CIGAR string
      21M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332228816
      XM_003263540
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      3,244 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XM_003263540
      0.65% cov
    • Alignment Length
      21 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297677211
      XM_002816453
      1 of 4 hits reported for Pongo abelii.
    • Hit length
      10,578 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XM_002816453
      0.2% cov
    • Alignment Length
      21 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297290116
      XR_092070
      1 of 2 hits reported for Macaca mulatta.
    • Hit length
      3,246 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XR_092070
      0.65% cov
    • Alignment Length
      21 bp
  • Oryctolagus cuniculus

    Oryctolagus cuniculus

    • Public DB hit
      GI:291409237
      XM_002720866
      1 of 2 hits reported for Oryctolagus cuniculus.
    • Hit length
      2,376 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XM_002720866
      0.88% cov
    • Alignment Length
      21 bp
  • Taeniopygia guttata

    Taeniopygia guttata

    • Public DB hit
      GI:224045661
      XM_002188019
      1 of 2 hits reported for Taeniopygia guttata.
    • Hit length
      2,343 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XM_002188019
      0.9% cov
    • Alignment Length
      21 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:313883569
      HQ258517
    • Hit length
      2,482 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      HQ258517
      0.85% cov
    • Alignment Length
      21 bp
Occurrence
36 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
6
Length
21
Type
nucleotide
Locations
Undetermined

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:224922786
      NG_011571
      1 of 6 hits reported for Homo sapiens.
    • Hit length
      469,379 bp
    • E Value
      3.98E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      90.48%
    • Alignment (schematic)

      SEQ ID NO 6
      90.48% cov
      NG_011571
      0% cov
    • Alignment Length
      19 bp
    • CIGAR string
      2H19M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332822987
      XM_003311029
      1 of 4 hits reported for Pan troglodytes.
    • Hit length
      10,591 bp
    • E Value
      3.98E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      90.48%
    • Alignment (schematic)

      SEQ ID NO 6
      90.48% cov
      XM_003311029
      0.18% cov
    • Alignment Length
      19 bp
    • CIGAR string
      2H19M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332228816
      XM_003263540
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      3,244 bp
    • E Value
      3.98E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      90.48%
    • Alignment (schematic)

      SEQ ID NO 6
      90.48% cov
      XM_003263540
      0.59% cov
    • Alignment Length
      19 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297677211
      XM_002816453
      1 of 4 hits reported for Pongo abelii.
    • Hit length
      10,578 bp
    • E Value
      3.98E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      90.48%
    • Alignment (schematic)

      SEQ ID NO 6
      90.48% cov
      XM_002816453
      0.18% cov
    • Alignment Length
      19 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297290116
      XR_092070
      1 of 2 hits reported for Macaca mulatta.
    • Hit length
      3,246 bp
    • E Value
      3.98E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      90.48%
    • Alignment (schematic)

      SEQ ID NO 6
      90.48% cov
      XR_092070
      0.59% cov
    • Alignment Length
      19 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296197357
      XM_002746204
      1 of 2 hits reported for Callithrix jacchus.
    • Hit length
      2,485 bp
    • E Value
      3.98E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      90.48%
    • Alignment (schematic)

      SEQ ID NO 6
      90.48% cov
      XM_002746204
      0.76% cov
    • Alignment Length
      19 bp
  • Oryctolagus cuniculus

    Oryctolagus cuniculus

    • Public DB hit
      GI:291409237
      XM_002720866
      1 of 2 hits reported for Oryctolagus cuniculus.
    • Hit length
      2,376 bp
    • E Value
      3.98E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      90.48%
    • Alignment (schematic)

      SEQ ID NO 6
      90.48% cov
      XM_002720866
      0.8% cov
    • Alignment Length
      19 bp
  • Taeniopygia guttata

    Taeniopygia guttata

    • Public DB hit
      GI:224045661
      XM_002188019
      1 of 2 hits reported for Taeniopygia guttata.
    • Hit length
      2,343 bp
    • E Value
      3.98E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      90.48%
    • Alignment (schematic)

      SEQ ID NO 6
      90.48% cov
      XM_002188019
      0.81% cov
    • Alignment Length
      19 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:313883569
      HQ258517
    • Hit length
      2,482 bp
    • E Value
      3.98E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      90.48%
    • Alignment (schematic)

      SEQ ID NO 6
      90.48% cov
      HQ258517
      0.77% cov
    • Alignment Length
      19 bp
Occurrence
33 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
7
Length
145,606
Type
nucleotide
Locations
Detailed Description

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:11118351
      AF163864
      1 of 21 hits reported for Homo sapiens.
    • Hit length
      145,606 bp
    • E Value
      0E0
    • BLAST Score
      268,884.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      AF163864
      100% cov
    • Alignment Length
      145,606 bp
    • CIGAR string
      145606M mismatches: 0 - insertions: 0 - deletions: 0
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:134288945
      AC199599
    • Hit length
      192,996 bp
    • E Value
      0E0
    • BLAST Score
      15,823.2 bits
    • Similarity
      92.17%
    • Coverage
      7.71%
    • Alignment (schematic)

      SEQ ID NO 7
      7.71% cov
      AC199599
      5.83% cov
    • Alignment Length
      11,362 bp
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:114595194
      XM_001146510
    • Hit length
      2,639 bp
    • E Value
      0E0
    • BLAST Score
      4,098.8 bits
    • Similarity
      98.42%
    • Coverage
      1.6%
    • Alignment (schematic)

      SEQ ID NO 7
      1.6% cov
      XM_001146510
      88.1% cov
    • Alignment Length
      2,337 bp
    • CIGAR string
      24862H236MD40MN33MN152MD30MN35MN202MN78MN86MN12MN4MN88MN17MI2MD20MN54MN86MDM2D69MN83MN140MN36MN30MN9M4D143MN43MN99MN20MN22MN46MN108MN122M2D154M118408H mismatches: 24 - insertions: 1 - deletions: 12
Occurrence
32 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
8
Length
4,349
Type
nucleotide
Locations
Detailed Description

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:55750052
      NM_001007026
      1 of 7 hits reported for Homo sapiens.
    • Hit length
      4,367 bp
    • E Value
      0E0
    • BLAST Score
      8,032.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NM_001007026
      99.59% cov
    • Alignment Length
      4,349 bp
    • CIGAR string
      4349M mismatches: 0 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297690982
      XM_002822827
    • Hit length
      4,284 bp
    • E Value
      0E0
    • BLAST Score
      7,361.9 bits
    • Similarity
      97.74%
    • Coverage
      98.28%
    • Alignment (schematic)

      SEQ ID NO 8
      98.28% cov
      XM_002822827
      99.88% cov
    • Alignment Length
      4,293 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:167773200
      EU446506
    • Hit length
      3,616 bp
    • E Value
      0E0
    • BLAST Score
      6,575.2 bits
    • Similarity
      99.89%
    • Coverage
      82.11%
    • Alignment (schematic)

      SEQ ID NO 8
      82.11% cov
      EU446506
      98.84% cov
    • Alignment Length
      3,574 bp
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:77681490
      NM_001034165
    • Hit length
      3,561 bp
    • E Value
      0E0
    • BLAST Score
      6,488.4 bits
    • Similarity
      99.5%
    • Coverage
      82.16%
    • Alignment (schematic)

      SEQ ID NO 8
      82.16% cov
      NM_001034165
      100% cov
    • Alignment Length
      3,573 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296211237
      XR_088773
    • Hit length
      3,719 bp
    • E Value
      0E0
    • BLAST Score
      6,006.4 bits
    • Similarity
      95.9%
    • Coverage
      85.65%
    • Alignment (schematic)

      SEQ ID NO 8
      85.65% cov
      XR_088773
      99.44% cov
    • Alignment Length
      3,729 bp
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:335288519
      XM_003126540
    • Hit length
      4,306 bp
    • E Value
      0E0
    • BLAST Score
      5,445 bits
    • Similarity
      89.92%
    • Coverage
      98.07%
    • Alignment (schematic)

      SEQ ID NO 8
      98.07% cov
      XM_003126540
      98.37% cov
    • Alignment Length
      4,304 bp
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:297475286
      XM_002687862
    • Hit length
      4,442 bp
    • E Value
      0E0
    • BLAST Score
      5,236.4 bits
    • Similarity
      89.31%
    • Coverage
      96.9%
    • Alignment (schematic)

      SEQ ID NO 8
      96.9% cov
      XM_002687862
      94.37% cov
    • Alignment Length
      4,264 bp
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301773715
      XM_002922226
    • Hit length
      3,573 bp
    • E Value
      0E0
    • BLAST Score
      5,169.9 bits
    • Similarity
      92.81%
    • Coverage
      82.16%
    • Alignment (schematic)

      SEQ ID NO 8
      82.16% cov
      XM_002922226
      100% cov
    • Alignment Length
      3,589 bp
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332249347
      XM_003273777
    • Hit length
      4,256 bp
    • E Value
      0E0
    • BLAST Score
      4,680.5 bits
    • Similarity
      98.82%
    • Coverage
      60.43%
    • Alignment (schematic)

      SEQ ID NO 8
      60.43% cov
      XM_003273777
      61.72% cov
    • Alignment Length
      2,628 bp
  • Oryctolagus cuniculus

    Oryctolagus cuniculus

    • Public DB hit
      GI:291392786
      XM_002712915
    • Hit length
      3,543 bp
    • E Value
      0E0
    • BLAST Score
      4,566 bits
    • Similarity
      89.92%
    • Coverage
      82.16%
    • Alignment (schematic)

      SEQ ID NO 8
      82.16% cov
      XM_002712915
      100% cov
    • Alignment Length
      3,593 bp
Occurrence
41 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
9
Length
13,994
Type
nucleotide
Locations
Detailed Description

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:450447
      L27416
      1 of 14 hits reported for Homo sapiens.
    • Hit length
      842 bp
    • E Value
      0E0
    • BLAST Score
      1,556 bits
    • Similarity
      100%
    • Coverage
      6.02%
    • Alignment (schematic)

      SEQ ID NO 9
      6.02% cov
      L27416
      100% cov
    • Alignment Length
      842 bp
    • CIGAR string
      13152H842M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332818988
      XM_517080
    • Hit length
      13,621 bp
    • E Value
      0E0
    • BLAST Score
      1,472.9 bits
    • Similarity
      99.38%
    • Coverage
      5.8%
    • Alignment (schematic)

      SEQ ID NO 9
      5.8% cov
      XM_517080
      5.96% cov
    • Alignment Length
      812 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297673011
      XM_002814525
    • Hit length
      13,169 bp
    • E Value
      0E0
    • BLAST Score
      1,343.6 bits
    • Similarity
      96.56%
    • Coverage
      5.8%
    • Alignment (schematic)

      SEQ ID NO 9
      5.8% cov
      XM_002814525
      6.16% cov
    • Alignment Length
      814 bp
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332259986
      XM_003279017
    • Hit length
      10,341 bp
    • E Value
      0E0
    • BLAST Score
      1,317.8 bits
    • Similarity
      95.95%
    • Coverage
      5.8%
    • Alignment (schematic)

      SEQ ID NO 9
      5.8% cov
      XM_003279017
      7.86% cov
    • Alignment Length
      815 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297281951
      XM_001086119
    • Hit length
      9,986 bp
    • E Value
      0E0
    • BLAST Score
      1,301.2 bits
    • Similarity
      95.58%
    • Coverage
      5.8%
    • Alignment (schematic)

      SEQ ID NO 9
      5.8% cov
      XM_001086119
      8.14% cov
    • Alignment Length
      815 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:225000683
      BC172756
    • Hit length
      9,496 bp
    • E Value
      3.29E-179
    • BLAST Score
      641.9 bits
    • Similarity
      99.16%
    • Coverage
      2.54%
    • Alignment (schematic)

      SEQ ID NO 9
      2.54% cov
      BC172756
      3.76% cov
    • Alignment Length
      357 bp
Occurrence
32 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
10
Length
118,777
Type
nucleotide
Locations
Detailed Description

Declared organism:
Mus musculus

Occurrence
32 times in PatSeqDB
Tools
PatSeq Finder

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