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Search for Biological Sequences disclosed in Patents

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Data obtained from: DDBJ Pat NCBI GenBank USPTO Fulltext EMBL-EBI Pat
2 sequences found in this patent (in total)

Displaying 2 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
1,245
Type
nucleotide
Locations
Detailed Description

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:145275218
      NM_022454
      1 of 5 hits reported for Homo sapiens.
    • Hit length
      2,350 bp
    • E Value
      0E0
    • BLAST Score
      2,300.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      NM_022454
      52.98% cov
    • Alignment Length
      1,245 bp
    • CIGAR string
      1245M mismatches: 0 - insertions: 0 - deletions: 0
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:147898034
      BC140307
      1 of 2 hits reported for synthetic construct.
    • Hit length
      1,306 bp
    • E Value
      0E0
    • BLAST Score
      2,296.5 bits
    • Similarity
      100%
    • Coverage
      99.84%
    • Alignment (schematic)

      SEQ ID NO 1
      99.84% cov
      BC140307
      95.18% cov
    • Alignment Length
      1,243 bp
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332829867
      XM_001153136
    • Hit length
      2,409 bp
    • E Value
      0E0
    • BLAST Score
      2,233.7 bits
    • Similarity
      98.96%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XM_001153136
      51.93% cov
    • Alignment Length
      1,251 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297682874
      XM_002819085
    • Hit length
      2,409 bp
    • E Value
      0E0
    • BLAST Score
      2,167.2 bits
    • Similarity
      98%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XM_002819085
      51.93% cov
    • Alignment Length
      1,251 bp
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332213790
      XM_003255966
    • Hit length
      2,385 bp
    • E Value
      0E0
    • BLAST Score
      2,095.2 bits
    • Similarity
      97.19%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XM_003255966
      51.7% cov
    • Alignment Length
      1,245 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297299402
      XM_001083536
      1 of 2 hits reported for Macaca mulatta.
    • Hit length
      2,406 bp
    • E Value
      0E0
    • BLAST Score
      2,078.6 bits
    • Similarity
      96.79%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XM_001083536
      51.75% cov
    • Alignment Length
      1,245 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296226482
      XM_002758925
    • Hit length
      1,402 bp
    • E Value
      0E0
    • BLAST Score
      1,967.8 bits
    • Similarity
      95.19%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XM_002758925
      88.8% cov
    • Alignment Length
      1,248 bp
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:335286497
      XM_001928376
    • Hit length
      1,452 bp
    • E Value
      0E0
    • BLAST Score
      1,532 bits
    • Similarity
      89.22%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XM_001928376
      84.3% cov
    • Alignment Length
      1,252 bp
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:297482313
      XM_002692649
    • Hit length
      1,233 bp
    • E Value
      0E0
    • BLAST Score
      1,402.7 bits
    • Similarity
      87.31%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XM_002692649
      100% cov
    • Alignment Length
      1,261 bp
Occurrence
127 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
414
Type
peptide
Locations
Detailed Description

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:11967991
      NP_071899
    • Hit length
      414 aa
    • E Value
      0E0
    • BLAST Score
      832.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NP_071899
      100% cov
    • Alignment Length
      414 aa
    • CIGAR string
      414M mismatches: 0 - insertions: 0 - deletions: 0
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296226483
      XP_002758971
    • Hit length
      414 aa
    • E Value
      0E0
    • BLAST Score
      697.6 bits
    • Similarity
      97.58%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_002758971
      100% cov
    • Alignment Length
      414 aa
    • CIGAR string
      16MN33MN6MN119MN3MN25MN3MN37MN12MN3MN15MN11MN4MN16MN60MN6MNMN27M mismatches: 17 - insertions: 0 - deletions: 0
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:109086413
      XP_001083536
    • Hit length
      414 aa
    • E Value
      0E0
    • BLAST Score
      684.1 bits
    • Similarity
      98.07%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_001083536
      100% cov
    • Alignment Length
      414 aa
    • CIGAR string
      16MN33MN6MN123MN35MN15MN19MN15MNMN10MN11MN7MN22MN22MN35MN29M mismatches: 15 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297682875
      XP_002819131
    • Hit length
      416 aa
    • E Value
      0E0
    • BLAST Score
      670.2 bits
    • Similarity
      99.28%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_002819131
      100% cov
    • Alignment Length
      416 aa
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:194036735
      XP_001928411
    • Hit length
      407 aa
    • E Value
      0E0
    • BLAST Score
      667.9 bits
    • Similarity
      92.05%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_001928411
      100% cov
    • Alignment Length
      415 aa
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:114620158
      XP_001153136
    • Hit length
      416 aa
    • E Value
      0E0
    • BLAST Score
      666.4 bits
    • Similarity
      99.04%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_001153136
      100% cov
    • Alignment Length
      416 aa
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:157824128
      NP_001101372
    • Hit length
      423 aa
    • E Value
      0E0
    • BLAST Score
      661 bits
    • Similarity
      87.76%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NP_001101372
      100% cov
    • Alignment Length
      425 aa
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332213791
      XP_003256014
    • Hit length
      410 aa
    • E Value
      0E0
    • BLAST Score
      660.2 bits
    • Similarity
      97.1%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_003256014
      100% cov
    • Alignment Length
      414 aa
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:148682294
      EDL14241
      1 of 2 hits reported for Mus musculus.
    • Hit length
      428 aa
    • E Value
      0E0
    • BLAST Score
      658.3 bits
    • Similarity
      87.65%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      EDL14241
      97.9% cov
    • Alignment Length
      421 aa
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301780546
      XP_002925690
    • Hit length
      401 aa
    • E Value
      7.84E-172
    • BLAST Score
      608.6 bits
    • Similarity
      86.47%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_002925690
      100% cov
    • Alignment Length
      414 aa
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:329664600
      NP_001193180
    • Hit length
      410 aa
    • E Value
      1.02E-166
    • BLAST Score
      591.7 bits
    • Similarity
      87.8%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NP_001193180
      100% cov
    • Alignment Length
      418 aa
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:73999384
      XP_544084
    • Hit length
      402 aa
    • E Value
      5.18E-161
    • BLAST Score
      572.8 bits
    • Similarity
      84.25%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_544084
      100% cov
    • Alignment Length
      419 aa
Occurrence
217 times in PatSeqDB
Tools
PatSeq Finder

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