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Search for Biological Sequences disclosed in Patents

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Data obtained from: WIPO-PCT
30 sequences found in this patent (in total)

Displaying 1 - 10 of 30 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
2,127
Type
DNA
Locations
Claims, Fulltext

Declared organism:
Arabidopsis thaliana

Determined organism:
  • Arabidopsis thaliana

    Arabidopsis thaliana

    • Public DB hit
      GI:145361581
      NM_179710
      1 of 7 hits reported for Arabidopsis thaliana.
    • Hit length
      2,502 bp
    • E Value
      0E0
    • BLAST Score
      3,928.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      NM_179710
      85.01% cov
    • Alignment Length
      2,127 bp
    • CIGAR string
      2127M mismatches: 0 - insertions: 0 - deletions: 0
  • Arabidopsis lyrata subsp. lyrata

    Arabidopsis lyrata subsp. lyrata

    • Public DB hit
      GI:297825244
      XM_002880459
    • Hit length
      2,158 bp
    • E Value
      0E0
    • BLAST Score
      2,929.9 bits
    • Similarity
      91.83%
    • Coverage
      99.06%
    • Alignment (schematic)

      SEQ ID NO 1
      99.06% cov
      XM_002880459
      97.5% cov
    • Alignment Length
      2,117 bp
Occurrence
4 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
708
Type
peptide
Locations
Fulltext

Declared organism:
Arabidopsis thaliana

Determined organism:
  • Arabidopsis thaliana

    Arabidopsis thaliana

    • Public DB hit
      GI:18400282
      NP_565552
      1 of 2 hits reported for Arabidopsis thaliana.
    • Hit length
      708 aa
    • E Value
      0E0
    • BLAST Score
      1,463.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NP_565552
      100% cov
    • Alignment Length
      708 aa
    • CIGAR string
      708M mismatches: 0 - insertions: 0 - deletions: 0
  • Arabidopsis lyrata subsp. lyrata

    Arabidopsis lyrata subsp. lyrata

    • Public DB hit
      GI:297825245
      XP_002880505
    • Hit length
      705 aa
    • E Value
      0E0
    • BLAST Score
      1,288.5 bits
    • Similarity
      94.92%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_002880505
      100% cov
    • Alignment Length
      708 aa
    • CIGAR string
      6M2D12MNMN4MN7MND4N4MN21MNMN5MN15M2N5MN10MN5MN12MNM2N16MNMN3M2N9MN14MN17MNMN19MNM4N2MN2MN4MN7MN5MNMN4M4N6MN30MN2M2N49MN2MN106MN135MN26MN4MN25MN11MNMN37M mismatches: 56 - insertions: 0 - deletions: 3
  • Vitis vinifera

    Vitis vinifera

    • Public DB hit
      GI:225467023
      XP_002265861
    • Hit length
      538 aa
    • E Value
      0E0
    • BLAST Score
      644.4 bits
    • Similarity
      76.24%
    • Coverage
      74.86%
    • Alignment (schematic)

      SEQ ID NO 2
      74.86% cov
      XP_002265861
      99.63% cov
    • Alignment Length
      543 aa
Occurrence
14 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
3
Length
2,112
Type
DNA
Locations
Claims, Fulltext

Declared organism:
Solanum lycopersicum

Occurrence
4 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
4
Length
703
Type
peptide
Locations
Fulltext

Declared organism:
Solanum lycopersicum

Determined organism:
  • Solanum lycopersicum

    Solanum lycopersicum

    • Public DB hit
      GI:42741727
      AAS45124
    • Hit length
      703 aa
    • E Value
      0E0
    • BLAST Score
      1,457.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      AAS45124
      100% cov
    • Alignment Length
      703 aa
    • CIGAR string
      703M mismatches: 0 - insertions: 0 - deletions: 0
  • Ricinus communis

    Ricinus communis

    • Public DB hit
      GI:255562745
      XP_002522378
    • Hit length
      701 aa
    • E Value
      0E0
    • BLAST Score
      864 bits
    • Similarity
      75.43%
    • Coverage
      99%
    • Alignment (schematic)

      SEQ ID NO 4
      99% cov
      XP_002522378
      99.14% cov
    • Alignment Length
      704 aa
    • CIGAR string
      5H3M4NM18NM3N2M3NM2NDN8MN2MNMNMNM3N2MNMN3M3N2MNM5NM5NMNM2NM13N7MN2M4NMNMN2M7NMNMN2M5NM2N3M2NM2INMNMNM2NM3N2M4N2M3NM2NM4N5DN2M3N2MNMNMNMNMN5IM3N4M3NM5N4MNM2N2MN4M2N5MN2MN2MNMNM2NMN6MN11MN3MN2M3NM2NMN2MN2M2NMN2MN3MN4M2N2M4NMN3MN3MN21M2N7MN4MNM3N5MN20MN2MN8MN3MN7M2N11MN3MN3MN24M2N10MN3M2N13MN6M2N20M2N7MN3MN11MNMN7MNMNMN8MNMN17MNMN3MN3MN4MNM2N3D3NMNM3N6M3N2MNM6N2MI2MN4MN2M6NM3N4MN9M2N2MNMN2MNMN4MN2H mismatches: 252 - insertions: 8 - deletions: 9
  • Vitis vinifera

    Vitis vinifera

    • Public DB hit
      GI:225467721
      XP_002262800
      1 of 2 hits reported for Vitis vinifera.
    • Hit length
      699 aa
    • E Value
      0E0
    • BLAST Score
      806.2 bits
    • Similarity
      78.09%
    • Coverage
      95.02%
    • Alignment (schematic)

      SEQ ID NO 4
      95.02% cov
      XP_002262800
      94.85% cov
    • Alignment Length
      671 aa
Occurrence
27 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
5
Length
2,037
Type
DNA
Locations
Claims, Fulltext

Declared organism:
Vitis vinifera

Occurrence
4 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
6
Length
678
Type
peptide
Locations
Fulltext

Declared organism:
Vitis vinifera

Determined organism:
  • Vitis vinifera

    Vitis vinifera

    • Public DB hit
      GI:225467721
      XP_002262800
      1 of 3 hits reported for Vitis vinifera.
    • Hit length
      699 aa
    • E Value
      0E0
    • BLAST Score
      1,299.3 bits
    • Similarity
      95.94%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XP_002262800
      98.57% cov
    • Alignment Length
      689 aa
    • CIGAR string
      594M3NM8NM6N11I65M mismatches: 17 - insertions: 11 - deletions: 0
  • Ricinus communis

    Ricinus communis

    • Public DB hit
      GI:255562745
      XP_002522378
    • Hit length
      701 aa
    • E Value
      0E0
    • BLAST Score
      897.5 bits
    • Similarity
      78.64%
    • Coverage
      96.46%
    • Alignment (schematic)

      SEQ ID NO 6
      96.46% cov
      XP_002522378
      95.44% cov
    • Alignment Length
      674 aa
    • CIGAR string
      24HN3M3NMNMNMN6M4NMN3M3NIMNMNM2NMN3MNM3NM3N3MNMNM4NMN4M2N2M4NMN2MN3M4NMNMN4MNM2NM5N2M2N3MDMNM7NI3NM2NM4N5M2NMN2MNDN2M2N4M5NMN4M2NM5INM3NM2NM4NINM2NMN2MNMN3MN4M2N4M2NM2N6M2NMN7MN5MNMN5M3N3MNM2NMN2MNI2MNMN5MN10MN3MNMNMN12MN6MN6MN9MN2MN3MN8MN3MN13MN2MN7M2N3MN4MN9MN2MN2MN7MN4M2N3MN12MNM2N36MN20M3N33MNMNMN6MN3MN17MN5MN4M5IM3N3DN2M9N6IMN3M2NM2N3M2N4MN2MN2MN3MNMN11MN3MN7MN6MN2M mismatches: 198 - insertions: 20 - deletions: 5
  • Populus trichocarpa x Populus deltoides

    Populus trichocarpa x Populus deltoides

    • Public DB hit
      GI:118489147
      ABK96380
    • Hit length
      703 aa
    • E Value
      0E0
    • BLAST Score
      822.8 bits
    • Similarity
      75.37%
    • Coverage
      96.31%
    • Alignment (schematic)

      SEQ ID NO 6
      96.31% cov
      ABK96380
      94.59% cov
    • Alignment Length
      670 aa
  • Solanum lycopersicum

    Solanum lycopersicum

    • Public DB hit
      GI:42741727
      AAS45124
    • Hit length
      703 aa
    • E Value
      0E0
    • BLAST Score
      804.7 bits
    • Similarity
      75.56%
    • Coverage
      96.17%
    • Alignment (schematic)

      SEQ ID NO 6
      96.17% cov
      AAS45124
      95.02% cov
    • Alignment Length
      671 aa
Occurrence
4 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
7
Length
2,088
Type
DNA
Locations
Claims, Fulltext

Declared organism:
Populus trichocarpa

Determined organism:
  • Populus trichocarpa

    Populus trichocarpa

    • Public DB hit
      GI:224084228
      XM_002307201
      1 of 2 hits reported for Populus trichocarpa.
    • Hit length
      2,088 bp
    • E Value
      0E0
    • BLAST Score
      3,856.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XM_002307201
      100% cov
    • Alignment Length
      2,088 bp
    • CIGAR string
      2088M mismatches: 0 - insertions: 0 - deletions: 0
  • Populus trichocarpa x Populus deltoides

    Populus trichocarpa x Populus deltoides

    • Public DB hit
      GI:118489146
      EF148408
    • Hit length
      2,343 bp
    • E Value
      0E0
    • BLAST Score
      1,616.9 bits
    • Similarity
      89.56%
    • Coverage
      61.02%
    • Alignment (schematic)

      SEQ ID NO 7
      61.02% cov
      EF148408
      54.63% cov
    • Alignment Length
      1,283 bp
    • CIGAR string
      814H18M2N2MN7MN3MN2M2N12MN4MDNM2NMI2MN7MI2M4INMI3MN7MN45MN2MN5MN19MN18MN8MN10MN22MNMN9MN3MN15MN9MN3MN3MN15MN6MN30MN2MN8MN20MN6MN10MN50MN2MN4MN11M2N5MN2MN5MN5MN2MN23MN8MN13MNMN46MN50MN7M2N11MN8MN38MN35MN8MN2MN8MN19MN5MN18MN8MN57MN19M2N20MN4MN4MN12MN5MN17MN20MN3MN7MN4M2N5MN8MNMN3MN9MNMN2MN6MN10MN6MN4MN3M3NMN4MNM2N20MNMN6MN6MN8MND2MI6M2N3MN4MN2MN4MN14MD2MI6MN9M2N12MN2MN7M2N6MN25MN12MN6MN11MN4M mismatches: 122 - insertions: 9 - deletions: 3
  • Ricinus communis

    Ricinus communis

    • Public DB hit
      GI:255562744
      XM_002522332
    • Hit length
      2,106 bp
    • E Value
      0E0
    • BLAST Score
      1,266.1 bits
    • Similarity
      84.82%
    • Coverage
      60.68%
    • Alignment (schematic)

      SEQ ID NO 7
      60.68% cov
      XM_002522332
      60.45% cov
    • Alignment Length
      1,285 bp
Occurrence
4 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
8
Length
695
Type
peptide
Locations
Fulltext

Declared organism:
Populus trichocarpa

Determined organism:
  • Populus trichocarpa

    Populus trichocarpa

    • Public DB hit
      GI:224084229
      XP_002307237
      1 of 2 hits reported for Populus trichocarpa.
    • Hit length
      695 aa
    • E Value
      0E0
    • BLAST Score
      1,444.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XP_002307237
      100% cov
    • Alignment Length
      695 aa
    • CIGAR string
      695M mismatches: 0 - insertions: 0 - deletions: 0
  • Populus trichocarpa x Populus deltoides

    Populus trichocarpa x Populus deltoides

    • Public DB hit
      GI:118489147
      ABK96380
    • Hit length
      703 aa
    • E Value
      0E0
    • BLAST Score
      1,021.9 bits
    • Similarity
      82.44%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      ABK96380
      100% cov
    • Alignment Length
      712 aa
    • CIGAR string
      8MN4MN6MN2M2NMN4MNMINMN4MN4MN9MN4MNMNM2NMNM2N13MNM2NM2N8MNMN4MNM2N2M2N8MN2MN5M2NM5NM3N2MD2N2M2NMN3M6N3MNM4N2MNMN6M2NM5N4MN2MN8MND4N2MN3M3N3MN2M2N6MN8M2N5MN14IM2NM4N7D4N5MN3M2NMN3MNM2N4MN2I3MN24MN8MN3MN7MN3M2N8M3N5MNMN23MN22MN3MN15MN7M2N34MN45MNMN8MN19MN6MN6MN2MN20MN3MN5MN4MN3MN5MN2M2NM2N6MN2MNMN2M2NM3NM2N12MN7MN2MN14MN3MN mismatches: 155 - insertions: 17 - deletions: 9
  • Ricinus communis

    Ricinus communis

    • Public DB hit
      GI:255562745
      XP_002522378
    • Hit length
      701 aa
    • E Value
      0E0
    • BLAST Score
      991.5 bits
    • Similarity
      81.2%
    • Coverage
      99.14%
    • Alignment (schematic)

      SEQ ID NO 8
      99.14% cov
      XP_002522378
      99.86% cov
    • Alignment Length
      702 aa
  • Arabidopsis lyrata subsp. lyrata

    Arabidopsis lyrata subsp. lyrata

    • Public DB hit
      GI:297825245
      XP_002880505
    • Hit length
      705 aa
    • E Value
      0E0
    • BLAST Score
      788.9 bits
    • Similarity
      75%
    • Coverage
      94.82%
    • Alignment (schematic)

      SEQ ID NO 8
      94.82% cov
      XP_002880505
      93.48% cov
    • Alignment Length
      672 aa
  • Vitis vinifera

    Vitis vinifera

    • Public DB hit
      GI:225467023
      XP_002265861
    • Hit length
      538 aa
    • E Value
      0E0
    • BLAST Score
      663.7 bits
    • Similarity
      75.96%
    • Coverage
      76.26%
    • Alignment (schematic)

      SEQ ID NO 8
      76.26% cov
      XP_002265861
      100% cov
    • Alignment Length
      545 aa
Occurrence
4 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
9
Length
2,115
Type
DNA
Locations
Claims, Fulltext

Declared organism:
Oryza sativa

Determined organism:
  • Oryza sativa Japonica Group

    Oryza sativa Japonica Group

    • Public DB hit
      GI:115451668
      NM_001055970
      1 of 3 hits reported for Oryza sativa Japonica Group.
    • Hit length
      2,257 bp
    • E Value
      0E0
    • BLAST Score
      3,906.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      NM_001055970
      93.71% cov
    • Alignment Length
      2,115 bp
    • CIGAR string
      2115M mismatches: 0 - insertions: 0 - deletions: 0
  • Oryza glaberrima

    Oryza glaberrima

    • Public DB hit
      GI:157419165
      AC210470
    • Hit length
      128,640 bp
    • E Value
      0E0
    • BLAST Score
      2,339 bits
    • Similarity
      99.76%
    • Coverage
      60.28%
    • Alignment (schematic)

      SEQ ID NO 9
      60.28% cov
      AC210470
      0.99% cov
    • Alignment Length
      1,275 bp
  • Sorghum bicolor

    Sorghum bicolor

    • Public DB hit
      GI:242041686
      XM_002468193
    • Hit length
      2,333 bp
    • E Value
      0E0
    • BLAST Score
      1,484 bits
    • Similarity
      83.66%
    • Coverage
      75.56%
    • Alignment (schematic)

      SEQ ID NO 9
      75.56% cov
      XM_002468193
      70.04% cov
    • Alignment Length
      1,658 bp
  • Hordeum vulgare subsp. vulgare

    Hordeum vulgare subsp. vulgare

    • Public DB hit
      GI:326532495
      AK373980
    • Hit length
      2,880 bp
    • E Value
      0E0
    • BLAST Score
      1,454.4 bits
    • Similarity
      83.85%
    • Coverage
      73.38%
    • Alignment (schematic)

      SEQ ID NO 9
      73.38% cov
      AK373980
      54.93% cov
    • Alignment Length
      1,610 bp
Occurrence
4 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
10
Length
704
Type
peptide
Locations
Fulltext

Declared organism:
Oryza sativa

Determined organism:
  • Oryza sativa Japonica Group

    Oryza sativa Japonica Group

    • Public DB hit
      GI:115451669
      NP_001049435
      1 of 2 hits reported for Oryza sativa Japonica Group.
    • Hit length
      704 aa
    • E Value
      0E0
    • BLAST Score
      1,456 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      NP_001049435
      100% cov
    • Alignment Length
      704 aa
    • CIGAR string
      704M mismatches: 0 - insertions: 0 - deletions: 0
  • Oryza sativa Indica Group

    Oryza sativa Indica Group

    • Public DB hit
      GI:125542963
      EAY89102
    • Hit length
      704 aa
    • E Value
      0E0
    • BLAST Score
      1,447.2 bits
    • Similarity
      99.72%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      EAY89102
      100% cov
    • Alignment Length
      704 aa
    • CIGAR string
      310MN67MN292MN32M mismatches: 3 - insertions: 0 - deletions: 0
  • Hordeum vulgare subsp. vulgare

    Hordeum vulgare subsp. vulgare

    • Public DB hit
      GI:326532496
      BAK05177
    • Hit length
      721 aa
    • E Value
      0E0
    • BLAST Score
      978 bits
    • Similarity
      80.31%
    • Coverage
      95.88%
    • Alignment (schematic)

      SEQ ID NO 10
      95.88% cov
      BAK05177
      96.95% cov
    • Alignment Length
      701 aa
  • Sorghum bicolor

    Sorghum bicolor

    • Public DB hit
      GI:242041687
      XP_002468238
    • Hit length
      714 aa
    • E Value
      0E0
    • BLAST Score
      912.1 bits
    • Similarity
      78.61%
    • Coverage
      99.57%
    • Alignment (schematic)

      SEQ ID NO 10
      99.57% cov
      XP_002468238
      99.44% cov
    • Alignment Length
      720 aa
Occurrence
15 times in PatSeqDB
Tools
PatSeq Finder

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