US 6586175 B1 - Genotyping The Human Udp-glucuronosyltransferase 2b7 (ugt2b7) Gene - The Lens

Genotyping The Human Udp-glucuronosyltransferase 2b7 (ugt2b7) Gene

Published: Jul 1, 2003
Earliest Priority: Jul 28 1998
Family: 7
Cited Works: 24
Cited by: 10
Cites: 2
Sequences: 164
Additional Info: Cited Works Full text Published Sequence

Data obtained from: EMBL-EBI Pat USPTO Fulltext DDBJ Pat

164 sequences found in this patent (in total)

Download sequences in fasta format: 3 peptides 161 DNAs

Displaying 1 - 10 of 164 sequences

SEQ ID NO

Length

Sequence Type

Locations

Declared organism

Determined organism

Occurrence

Tools

SEQ ID NO

Length

1,323

Sequence Type

DNA

Locations

Claims, Summary

Declared organism

Homo sapiens

Determined organism

Homo sapiens
Homo sapiens
Public DB hit
GI:8650277
AF135416
1 of 6 hits reported for Homo sapiens.

Hit length
27,310 bp

E Value
0E0

BLAST Score
2,436.9 bits

Similarity

99.92%

Coverage

100%

Alignment (schematic)

SEQ ID NO 1

100% cov
AF135416

4.84% cov

Alignment Length
1,323 bp

CIGAR string
1319MD3M mismatches: 0 - insertions: 0 - deletions: 1
Papio anubis
Papio anubis
Public DB hit
GI:37777362
AC139345

Hit length
179,810 bp

E Value
0E0

BLAST Score
1,701.9 bits

Similarity

90.19%

Coverage

99.24%

Alignment (schematic)

SEQ ID NO 1

99.24% cov
AC139345

0.73% cov

Alignment Length
1,325 bp

CIGAR string
3H11MN7MN4MN18MN11MN10MN28MN10MI10MN16MN92MN50MN29MN2MN17MN9MN6MN4MN8MD3MNMIMN8MN6M2N14MN3MN4M2N10MN18M3N3MIMD2MN15MN4MIMD3MN16MN2MN6MN15MN10MNM2N6MIMD16MN3MNMN5MN4MN55MN3MN5MN19MN19MN29MN12MN8MN19MN2MN18MNMN5MN7MN6MN5MN14MN3MN2MN10MN8MN3MN3M2N4MN18MN24MD6MN3MI4MN4MN32MN2MN21MN6MIMND6MN2MI18M2DMN2MNMD3MD2MN11MN12MN6MN4MN3MN8MN10MNMIMD9MN17MN6MN12MN21MN7MN7MD7MND11MD8MN2MD2MI14MN3MN11MN19MI11MNMN7MN14MI9M7H mismatches: 103 - insertions: 12 - deletions: 15
Pan troglodytes
Pan troglodytes
Public DB hit
GI:332819651
XM_001161846
1 of 2 hits reported for Pan troglodytes.

Hit length
2,494 bp

E Value
0E0

BLAST Score
1,498.8 bits

Similarity

99.16%

Coverage

62.96%

Alignment (schematic)

SEQ ID NO 1

62.96% cov
XM_001161846

33.36% cov

Alignment Length
833 bp

CIGAR string
69H49MN173MN74MN7MN138MN19MN363MD3M421H mismatches: 6 - insertions: 0 - deletions: 1
Macaca mulatta
Macaca mulatta
Public DB hit
GI:148529039
AC203187

Hit length
171,071 bp

E Value
0E0

BLAST Score
1,310.4 bits

Similarity

85.09%

Coverage

99.32%

Alignment (schematic)

SEQ ID NO 1

99.32% cov
AC203187

0.76% cov

Alignment Length
1,341 bp

CIGAR string
4MN4MD2MNMN7MN3MN13MNMIM2IN2M2I5MI3MN5MN11MN3M2N19MN2MN6MIMN7MN23MN30MN10MN15MDMIN7MN5MN7MN40MNMDMI6MIMD5MN11MN14MN2MN30MN15MN4MIMN3MD10MNMN4M2N8MN14M2N23MDMNMI3MDMIMNMN3MNMNMN11MN4MN11MN10MN13MN18MDMI3M2N7MN7MN8MN3MN17MD3MI13MN17MN3MD2MI6MN2MN4MN4MNMN13MN3MN2MN4MN5MI3MD2MN5MN9MN12M3N11MN8MN4MN8MN5MN2MN18MN7MN14MN38MN5MN6MNMNMN24MN2MN19MN2D6M2D2MN2D2MIMD2MNMDMD2MNMD3MNMD2MDMD6MNMN3MN2MN30MD4MD4MI9MN4MN3MNM2N2MN8MN3MN7M2NMN9MDMIMI10MN11MN3MN10MNMN6MN2MD3MI4MN6MN3MNMN10MN6M3D11MN3MN5MN4MN8MI4MI9MNMNMD2MNMN2M2N2MD2MNMI8MN11MNIMND4MN19MI2MN15MDMD9M2N11M9H mismatches: 137 - insertions: 27 - deletions: 36

Occurrence

5 times in PatSeqDB

in 5 documents

Tools

SEQ ID NO

Length

746

Sequence Type

DNA

Locations

Summary

Declared organism

Homo sapiens

Determined organism

Homo sapiens
Homo sapiens
Public DB hit
GI:94717611
DQ520733
1 of 14 hits reported for Homo sapiens.

Hit length
19,657 bp

E Value
0E0

BLAST Score
1,378.7 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 2

100% cov
DQ520733

3.8% cov

Alignment Length
746 bp

CIGAR string
746M mismatches: 0 - insertions: 0 - deletions: 0
Papio anubis
Papio anubis
Public DB hit
GI:37777362
AC139345

Hit length
179,810 bp

E Value
0E0

BLAST Score
930 bits

Similarity

89.36%

Coverage

100%

Alignment (schematic)

SEQ ID NO 2

100% cov
AC139345

0.41% cov

Alignment Length
752 bp

CIGAR string
16MN3MN18MN20MN12MIMNMN6MN12M2NMNMN10MN31M5D4MN3MD11MN8MI4MI3MDN5MN9MN5MN3MI2MD6MN13MN54MN5MN4MN38MN24MD12MN7MNMN8MNMN9MN13MN11M2N3MNI9MD8MN10MN5MN2MN13M2N10MN19MDMI11MN5MN10MN8MN24MN3MN13MN2M2N6MN15MN14MN8MN4MNMN13MN15MN3MD2MN11MN17MN8MN4M mismatches: 62 - insertions: 6 - deletions: 12
Pan troglodytes
Pan troglodytes
Public DB hit
GI:88196915
AC182428

Hit length
210,098 bp

E Value
0E0

BLAST Score
651.1 bits

Similarity

82.63%

Coverage

100%

Alignment (schematic)

SEQ ID NO 2

100% cov
AC182428

0.37% cov

Alignment Length
783 bp

CIGAR string
5MN8M2N4MN7MN8MD13M2N7MN6MN5MIMN8MN5MNMNMD18MN13M2N10MN7M3N18MNMN5MD7MIMIMDN2M2N17MN16M2N9MN18MN4MN7MN5MIMDMN20MN2MN35MN2MN9MI2MI2M2NIMIMI3MNI6MD2MI7MN8MD3MI2MN7MIMIMIMN4MN18MN7MN3MI2MN4M2NMN25MNMN5MN3MN4MN6MIMDMN5MN3MN2MNMN6MN4MN5MN7MN23MI9MI3MND5MN3MNM2N10MN3MN3MN2MN5MN8MN4MN10MNMN8MN3MNM3IM5IMIM9I12MN4MN3MN13MN2M2N13MN15MNMNMN5M mismatches: 90 - insertions: 37 - deletions: 9
Pongo abelii
Pongo abelii
Public DB hit
GI:168986621
AC206703
1 of 2 hits reported for Pongo abelii.

Hit length
204,619 bp

E Value
6.14E-170

BLAST Score
606.8 bits

Similarity

83.72%

Coverage

88.61%

Alignment (schematic)

SEQ ID NO 2

88.61% cov
AC206703

0.32% cov

Alignment Length
682 bp

CIGAR string
1H4MN6MN7MN8MN12MN8MN7M2DM2D4M2D2M3D8MN3MNMI2MD5MN14MN13M2N15MN2M3N5MN4MDMIN5MNMDMI9MI3MI2M2D2MN18MN15MIMDN20MN7MN4MN5MN10MN3MN10MN5MN2MN20MN17MN9MI2MI2MNM2IMIMI3MN6MDMI4M2N11MDMI4M2N6M3I8MN8M2N7MD3MN4MNMI6MN2M2NMN3MN21MNMN14MN4MN3M2NMN3MN3MN2MI2MD6MN4MN5MN7MN2MN14MN4MI10MDMI15MN10MN3MN37MNMN8MN3M84H mismatches: 70 - insertions: 21 - deletions: 20
Macaca mulatta
Macaca mulatta
Public DB hit
GI:148529039
AC203187

Hit length
171,071 bp

E Value
7.94E-169

BLAST Score
603.1 bits

Similarity

81.53%

Coverage

100%

Alignment (schematic)

SEQ ID NO 2

100% cov
AC203187

0.45% cov

Alignment Length
785 bp

CIGAR string
5MN6MN2MN3M2N6MN9MD5MN8MN5MNMN12MIMN8MN5MN12MNMN6M2N12MDMIN12MN5MNMN18MNMN14MIMD2M3N10MN6MN10MN5M2N28MN4MN7MN5MN2MN20MN2M2N12MN24MN9MI2MIMIMIMN2MI3MNI6MD3MI6MN8MD4MNMI5M3IMN8MN4MN21MN3MI7M2NMN23MNMNMN6MN7MN6MN2MN5MN3MN2MNMNM2N3MN4MN2MD4MI6MN7M2N7MN6MI9MI3MND5M2N4M2N10MN2M2N12MN8MN4MDMI4MN2MNIMN2MD6MIM3IMIM2IMNM2IMNIM9I13MN4MN3MN13MN2M2N13MN7MN7MNMNMN5M mismatches: 97 - insertions: 39 - deletions: 9

Occurrence

5 times in PatSeqDB

in 5 documents

Tools

SEQ ID NO

Length

785

Sequence Type

DNA

Locations

Summary

Declared organism

Homo sapiens

Determined organism

Occurrence

5 times in PatSeqDB

in 5 documents

Tools

SEQ ID NO

Length

1,138

Sequence Type

DNA

Locations

Summary

Declared organism

Homo sapiens

Determined organism

Homo sapiens
Homo sapiens
Public DB hit
GI:8650277
AF135416
1 of 13 hits reported for Homo sapiens.

Hit length
27,310 bp

E Value
0E0

BLAST Score
2,080.4 bits

Similarity

99.65%

Coverage

100%

Alignment (schematic)

SEQ ID NO 4

100% cov
AF135416

4.17% cov

Alignment Length
1,140 bp

CIGAR string
996MI2MD45MI37MD56M mismatches: 0 - insertions: 2 - deletions: 2
Pongo abelii
Pongo abelii
Public DB hit
GI:156627771
AC206463
1 of 2 hits reported for Pongo abelii.

Hit length
196,461 bp

E Value
0E0

BLAST Score
1,849.6 bits

Similarity

95.92%

Coverage

100%

Alignment (schematic)

SEQ ID NO 4

100% cov
AC206463

0.58% cov

Alignment Length
1,152 bp

CIGAR string
22MN44MN3MN14MN83MD2MI49MIM3I8MN24MN20MN26M3D153MN32MN36MN11MN75MN7MNI17M2IM4I13MN20MN41MN106MN27M2N103MN24MN7MD3MI5MN36MN3MI10MN3MN22MD6MN21MN27M mismatches: 27 - insertions: 14 - deletions: 6
Papio anubis
Papio anubis
Public DB hit
GI:37777362
AC139345

Hit length
179,810 bp

E Value
0E0

BLAST Score
1,419.3 bits

Similarity

89.48%

Coverage

100%

Alignment (schematic)

SEQ ID NO 4

100% cov
AC139345

0.63% cov

Alignment Length
1,160 bp

CIGAR string
43MN17MN5MN3MN11MN2MN15MN8MN6MI25MI5MN10MD11MN32MN8MN13MN3MN3MN14MN3MN5MN43M3D23MN2MN11MNMN7MN3MN69MN16MN13MN32MN10MN25MN11MIMD13MI2MDMN10MN33MN19M2N3MI12M3IM2IMIMN12MN7MN4MN6M3DM2D2MD28MN4MN2MN15MN10M2DM2DMD22MNM3DMD5MDMDM2D30MN17MN5MN3M2N24MN12MN7MN19MN11MN33MN6M2D10MN6MNI2MD4MN29M2NMN2M2NMNMI6MN3MN24MNMIM2D2MN15M3I2M3IM2I16MN5MN10M mismatches: 70 - insertions: 22 - deletions: 30
Pan troglodytes
Pan troglodytes
Public DB hit
GI:88196915
AC182428

Hit length
210,098 bp

E Value
0E0

BLAST Score
898.6 bits

Similarity

82.98%

Coverage

90.07%

Alignment (schematic)

SEQ ID NO 4

90.07% cov
AC182428

0.5% cov

Alignment Length
1,075 bp

CIGAR string
4MI2MN10MN35MN6MI2MIMIM2IMN5MI2M3IMIMIMN3M2I3MIMI4N8MNMI3MIMI5MN3MN2M2N2MI2MN7MN13MN28MN9MN6MN10MN9MN3MD8MN2M2IM2I5MN3MI5MN4MN3M2N10MN12M2I7MI2MDMIMD4MDN11M3DN7M2N2M2N2MN4MNMN14MNMN30MN4MN2M2N39MNMN5MN38MN5MN5M2N5M2N12MN13MNMIMND4MI2MD9MNMI3MN7MN5MN4MN4MN4MI6MDM2D5MN5D3MD7MN17MNI14M4IMIMI20MN3MN11M3N5MN6MNIMI21M2N2MN13MNMNDMI9MNMN3MI2MDMN4MNMN22MD2MI5MD2MI2MN16MN7MIMD3MN9M3D4MN3MN2MIMD3MN6MNMN4MN5MN13M2N5MN14MN5MN3MN17MN12MN2MI2MD24MN7MI2MD3MN14MNMN5M113H mismatches: 104 - insertions: 50 - deletions: 29
Macaca mulatta
Macaca mulatta
Public DB hit
GI:148529039
AC203187

Hit length
171,071 bp

E Value
0E0

BLAST Score
808.1 bits

Similarity

82.92%

Coverage

81.63%

Alignment (schematic)

SEQ ID NO 4

81.63% cov
AC203187

0.54% cov

Alignment Length
960 bp

CIGAR string
88H6MI6MDMI3MNMN2M2N2M2N3MN6MNMN13MN28MN3M2NMI3MN6MN2MN7MN18M2IM2IN2MN8MN3MI2MN2MN4MN4MN15MN7M2I10MD2M2I4MD12M3DN4MN2M2NMD2MI2MD4MNMN10MIMD2MN8MN28MN33MN5MN5MN5MN14MN2MN20MN5MN6MN3MNM2N12MN15MIMND4MN8MN2MN2MI15M2N4MN2MN2MI3MD8M2D4MDMN3DMD2MD17MN7M2N8MI5M4IMIMI2MN17MN3MN11M3N5MN4MIMIMN19MN3MN2MN7MN5M4N8MI3MIMN3MDMDMN4MN24MN7MD2MI2MN16MN3MN4MN3MN4MD2MDMD10MN3MN3MN8MN10M2N12M2N12M2DM2D3MN5MN11MN9MN10MNMN2MI2MD24MN7MI2MND2MN7MN6M121H mismatches: 102 - insertions: 31 - deletions: 31

Occurrence

5 times in PatSeqDB

in 5 documents

Tools

SEQ ID NO

Length

689

Sequence Type

DNA

Locations

Summary

Declared organism

Homo sapiens

Determined organism

Homo sapiens
Homo sapiens
Public DB hit
GI:94717611
DQ520733
1 of 13 hits reported for Homo sapiens.

Hit length
19,657 bp

E Value
0E0

BLAST Score
1,273.5 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 5

100% cov
DQ520733

3.51% cov

Alignment Length
689 bp

CIGAR string
689M mismatches: 0 - insertions: 0 - deletions: 0
Pongo abelii
Pongo abelii
Public DB hit
GI:156627771
AC206463
1 of 2 hits reported for Pongo abelii.

Hit length
196,461 bp

E Value
0E0

BLAST Score
1,151.6 bits

Similarity

96.81%

Coverage

100%

Alignment (schematic)

SEQ ID NO 5

100% cov
AC206463

0.35% cov

Alignment Length
689 bp

CIGAR string
4MN38M2N124MN4MN5MN80MN21MN31MN56MN15MN5MN22MN10MN9MN8MN3MN126MN10MN23MN6MN30MN37M mismatches: 22 - insertions: 0 - deletions: 0
Papio anubis
Papio anubis
Public DB hit
GI:37777362
AC139345

Hit length
179,810 bp

E Value
0E0

BLAST Score
990.9 bits

Similarity

92.73%

Coverage

99.85%

Alignment (schematic)

SEQ ID NO 5

99.85% cov
AC139345

0.38% cov

Alignment Length
688 bp

CIGAR string
1H12MN24MN4MNMN16MN49MN13MN47MN5MN17MN29MNMN12MN17MN21MN10MN15MN10MN14MN13MN7MN13MN11MN3MN5MN13MN2MN16MN9MN12MN24MN8MN4M2N43MN12MN17MDMD3MD5MN5MN4MN24MN13MN10MN11M2NMN3MN15MN14M mismatches: 47 - insertions: 0 - deletions: 3
Pan troglodytes
Pan troglodytes
Public DB hit
GI:88196915
AC182428

Hit length
210,098 bp

E Value
0E0

BLAST Score
793.3 bits

Similarity

87.62%

Coverage

100%

Alignment (schematic)

SEQ ID NO 5

100% cov
AC182428

0.33% cov

Alignment Length
703 bp

CIGAR string
3MN12MN10MN3MN2MD2MI6MN5MN6M2N3MN9M2D53MN5MN41MN17MN14MDMI13MN20MN13MN15M2N8MN22MN2MN6MN24MN7MN3M2NMN5MI3MN6MN4MN6MN3MN5MN10MN3MN3MN14MN4MN4MN12MN8MN25MDMDMNI14M2N7MN9MN3MN5M2N2MN3MN5MN27MIMD11MNMIMNM5I5MIMN3MD2MD6MN4MN6MN2MN9MD2MI5MN3M2N23MDMI11M mismatches: 62 - insertions: 14 - deletions: 11
Macaca mulatta
Macaca mulatta
Public DB hit
GI:148529039
AC203187

Hit length
171,071 bp

E Value
0E0

BLAST Score
665.9 bits

Similarity

87.76%

Coverage

83.31%

Alignment (schematic)

SEQ ID NO 5

83.31% cov
AC203187

0.33% cov

Alignment Length
580 bp

CIGAR string
12H4MD6MN12MN6MN5MN6M2N3MN9M2D39MN13MN26MN20MN2MN2MN11M2N14MN13MN5MN14MN9MN4MN14MN9MN22MNIMND39MN3M2NMN5MI3MN6MN6MN4MN3MN5MN10MN3MN3MN14MN2MNMN3MIMD12MN8MN3MNMN18MIMDMNMN14MN8MI2MD4M2NMN9M2N2MN3MN5MN19MN7MIMD8M103H mismatches: 57 - insertions: 6 - deletions: 8

Occurrence

5 times in PatSeqDB

in 5 documents

Tools

SEQ ID NO

Length

1,589

Sequence Type

DNA

Locations

Summary

Declared organism

Homo sapiens

Determined organism

Occurrence

5 times in PatSeqDB

in 5 documents

Tools

SEQ ID NO

Length

2,092

Sequence Type

DNA

Locations

Summary

Declared organism

Homo sapiens

Determined organism

Homo sapiens
Homo sapiens
Public DB hit
GI:149944508
NM_021139
1 of 8 hits reported for Homo sapiens.

Hit length
2,119 bp

E Value
0E0

BLAST Score
3,853.2 bits

Similarity

99.9%

Coverage

100%

Alignment (schematic)

SEQ ID NO 7

100% cov
NM_021139

98.73% cov

Alignment Length
2,092 bp

CIGAR string
1848MN222MN20M mismatches: 2 - insertions: 0 - deletions: 0
Pan troglodytes
Pan troglodytes
Public DB hit
GI:332819651
XM_001161846

Hit length
2,494 bp

E Value
0E0

BLAST Score
3,779.4 bits

Similarity

99.28%

Coverage

100%

Alignment (schematic)

SEQ ID NO 7

100% cov
XM_001161846

83.84% cov

Alignment Length
2,092 bp

CIGAR string
153MN74MN7MN138MN19MN789MN101MN106MN122MN74MN8MN68MN114MN62MN71MD171M mismatches: 14 - insertions: 0 - deletions: 1
Pongo abelii
Pongo abelii
Public DB hit
GI:297673633
XM_002814814
1 of 2 hits reported for Pongo abelii.

Hit length
2,103 bp

E Value
0E0

BLAST Score
3,620.6 bits

Similarity

97.9%

Coverage

100%

Alignment (schematic)

SEQ ID NO 7

100% cov
XM_002814814

99.48% cov

Alignment Length
2,093 bp

CIGAR string
115MN25MN82MN3MN18MN56MN28MN79MN9MN69MN25MN3MN113MN7MN14MN38MN71MN26MN104MN80MN120MN68MN4MN5MN80MN21MN31MN86MN50MN58MN9MN24MN101MN3MN11MN20MN92M2N48MI2MD11MN176MN2MN30MN32M mismatches: 42 - insertions: 1 - deletions: 1
Nomascus leucogenys
Nomascus leucogenys
Public DB hit
GI:332233090
XM_003265688

Hit length
2,102 bp

E Value
0E0

BLAST Score
3,513.4 bits

Similarity

96.99%

Coverage

100%

Alignment (schematic)

SEQ ID NO 7

100% cov
XM_003265688

99.48% cov

Alignment Length
2,094 bp

CIGAR string
12MN22MN105MN29MN56MN42MN61MN61MN6MI2MD6MN47MN59MN3MN46MN14MN9MN41MN7MN68MN29MN8MN17MN26MN45MN40MN17MN23MN18MN22MN112MN48MN42MN4MN5MN102MN10MN107MN23MN26MN58MN13MN91MN11MN17M2N8MI7MN12MN7MN156MN3MN47MN4MN14MD22MN16MN25M2N13MNMD24MN28MN34M mismatches: 58 - insertions: 2 - deletions: 3
Macaca mulatta
Macaca mulatta
Public DB hit
GI:297292794
XM_001107708
1 of 2 hits reported for Macaca mulatta.

Hit length
2,217 bp

E Value
0E0

BLAST Score
2,941 bits

Similarity

92.08%

Coverage

100%

Alignment (schematic)

SEQ ID NO 7

100% cov
XM_001107708

94.5% cov

Alignment Length
2,109 bp

CIGAR string
3MN86MN50MN20MN8MN30MN6MN4MN8MD3MNMI10MN7MN14MN3MN3MDMNI9M2N18M3N3MN3MN15MN4MIMD3MN16MN2MN6MN3MN11MN10MNM2N6MIMD16MN3MNMN5MN53MN6MN3MN5MN9MN5MN3MN19MN30MN11MN7M2N22MN6MDMI10MN4MN2MN14MN5MN3MN14MN2MN10MN12MN3M2N2M2NMN5MN11MN29MN4MN5MN15MN41MN62MN17MN17MN29MN13MN18MN71MN16MN13MN25MN26MN20MN47MN20MN14MN14M2N8MN46MN41MN29MN50MN20MN37MN82MN10MN12MN3MN24M2N8MIMNMN3MN4MN2MD4M2N4MNMN14M2D16MN30MN4M2N3M6IMIMI17M2N14MIMD7MN13MN11MN9MN2MN3MN23MN18MI2MD7MN3MN10MD2MDMN19MD8M2N23MN6M2N6MN4MN7MN6MN13MN32MI3MD10MN10MN5M mismatches: 136 - insertions: 17 - deletions: 14
Macaca fascicularis
Macaca fascicularis
Public DB hit
GI:158052972
AB362508
1 of 3 hits reported for Macaca fascicularis.

Hit length
2,225 bp

E Value
0E0

BLAST Score
2,926.2 bits

Similarity

91.94%

Coverage

100%

Alignment (schematic)

SEQ ID NO 7

100% cov
AB362508

94.2% cov

Alignment Length
2,110 bp

CIGAR string
3MN86MN50MN20MN8MN30MN6MN4MN8MD3MNMI10MN7MN14MN3MN3MDMNI9M2N18M3N3MN3MN15MN4MIMD3MN16MN2MN6MN3MN11MN10MNM2N6MIMD16MN3MNMN5MN53MN6MN3MN5MN9MN5MN3MN19MN30MN11MN7M2N22MN6MDMI10MN4MN2MN14MN5MN18MN2MN10MN12MN3M2N2M2NMN5MN11MN29MN4MN5MN15MN41MN62MN17MN17MN29MN13MN18MN71MN16MN13MN25MN26MN20MN47MN20MN14MN14M2N8MN24MN21MN9MN17MN13MN29MN50MN20MN36M2N82MN10MN12MN3MN24M2N8MIMNMN3MN4MN2MD4M2N4MNMN14M2D16MN30MN4M2N3M7IMIMI17M2N14MIMD7MN13MN11MN12MN3MN12MN10MN18MI2MD7MN3MN10MD2MDMN19MD9MN23MN6M2N6MN4MN7MN6MN13MN32MI3MD10MN10MN5M mismatches: 138 - insertions: 18 - deletions: 14
synthetic construct
synthetic construct
Public DB hit
GI:123997054
DQ895203

Hit length
1,627 bp

E Value
0E0

BLAST Score
2,922.5 bits

Similarity

99.94%

Coverage

75.76%

Alignment (schematic)

SEQ ID NO 7

75.76% cov
DQ895203

97.42% cov

Alignment Length
1,585 bp

CIGAR string
37H1268MN316M470H mismatches: 1 - insertions: 0 - deletions: 0

Occurrence

5 times in PatSeqDB

in 5 documents

Tools

SEQ ID NO

Length

528

Sequence Type

peptide

Locations

Summary

Declared organism

Homo sapiens

Determined organism

Homo sapiens
Homo sapiens
Public DB hit
GI:149944509
NP_066962
1 of 4 hits reported for Homo sapiens.

Hit length
528 aa

E Value
0E0

BLAST Score
1,095.9 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 8

100% cov
NP_066962

100% cov

Alignment Length
528 aa

CIGAR string
528M mismatches: 0 - insertions: 0 - deletions: 0
Pan troglodytes
Pan troglodytes
Public DB hit
GI:114594454
XP_001161846

Hit length
528 aa

E Value
0E0

BLAST Score
1,080.1 bits

Similarity

99.05%

Coverage

100%

Alignment (schematic)

SEQ ID NO 8

100% cov
XP_001161846

100% cov

Alignment Length
528 aa
Nomascus leucogenys
Nomascus leucogenys
Public DB hit
GI:332233091
XP_003265736
1 of 2 hits reported for Nomascus leucogenys.

Hit length
528 aa

E Value
0E0

BLAST Score
1,073.9 bits

Similarity

99.05%

Coverage

100%

Alignment (schematic)

SEQ ID NO 8

100% cov
XP_003265736

100% cov

Alignment Length
528 aa
Pongo abelii
Pongo abelii
Public DB hit
GI:297673634
XP_002814860
1 of 3 hits reported for Pongo abelii.

Hit length
528 aa

E Value
0E0

BLAST Score
1,072.4 bits

Similarity

99.05%

Coverage

100%

Alignment (schematic)

SEQ ID NO 8

100% cov
XP_002814860

100% cov

Alignment Length
528 aa
Macaca mulatta
Macaca mulatta
Public DB hit
GI:109074627
XP_001107708
1 of 2 hits reported for Macaca mulatta.

Hit length
528 aa

E Value
0E0

BLAST Score
989.9 bits

Similarity

94.32%

Coverage

100%

Alignment (schematic)

SEQ ID NO 8

100% cov
XP_001107708

100% cov

Alignment Length
528 aa
Papio anubis
Papio anubis
Public DB hit
GI:288541317
NP_001165611
1 of 2 hits reported for Papio anubis.

Hit length
528 aa

E Value
0E0

BLAST Score
987.6 bits

Similarity

94.89%

Coverage

100%

Alignment (schematic)

SEQ ID NO 8

100% cov
NP_001165611

100% cov

Alignment Length
528 aa
Macaca fascicularis
Macaca fascicularis
Public DB hit
GI:8134780
Q9XT55

Hit length
528 aa

E Value
0E0

BLAST Score
984.2 bits

Similarity

94.13%

Coverage

100%

Alignment (schematic)

SEQ ID NO 8

100% cov
Q9XT55

100% cov

Alignment Length
528 aa

Occurrence

47 times in PatSeqDB

in 11 extended families
(2 referenced in claims)
in 14 simple families
(3 referenced in claims)
in 43 documents

Tools

SEQ ID NO

Length

Sequence Type

DNA

Locations

Summary

Declared organism

Homo sapiens

Determined organism

Occurrence

5 times in PatSeqDB

in 5 documents

Tools

SEQ ID NO

Length

Sequence Type

DNA

Locations

Summary

Declared organism

Homo sapiens

Determined organism

Occurrence

5 times in PatSeqDB

in 5 documents

Tools

164 sequences found in this patent (in total)

Filter sequences

Displaying 1 - 10 of 164 sequences

Homo sapiens

Public DB hit

Hit length

E Value

BLAST Score

Similarity

Coverage

Alignment (schematic)

Alignment Length

CIGAR string

Papio anubis

Public DB hit

Hit length

E Value

BLAST Score

Similarity

Coverage

Alignment (schematic)

Alignment Length

CIGAR string

Pan troglodytes

Public DB hit

Hit length

E Value

BLAST Score

Similarity

Coverage

Alignment (schematic)

Alignment Length

CIGAR string

Macaca mulatta

Public DB hit

Hit length

E Value

BLAST Score

Similarity

Coverage

Alignment (schematic)

Alignment Length

CIGAR string

Homo sapiens

Public DB hit

Hit length

E Value

BLAST Score

Similarity

Coverage

Alignment (schematic)

Alignment Length

CIGAR string

Papio anubis

Public DB hit

Hit length

E Value

BLAST Score

Similarity

Coverage

Alignment (schematic)

Alignment Length

CIGAR string

Pan troglodytes

Public DB hit

Hit length

E Value

BLAST Score

Similarity

Coverage

Alignment (schematic)

Alignment Length

CIGAR string

Pongo abelii

Public DB hit

Hit length

E Value

BLAST Score

Similarity

Coverage