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Search for Biological Sequences disclosed in Patents

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Data obtained from: DDBJ Pat NCBI GenBank USPTO Fulltext EMBL-EBI Pat
27 sequences found in this patent (in total)

Displaying 1 - 10 of 27 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
1,168
Type
nucleotide
Locations
Detailed Description, Summary

Declared organism:
Homo sapiens

Determined organism:
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:33348855
      AF030100
      1 of 6 hits reported for Mus musculus.
    • Hit length
      1,239 bp
    • E Value
      0E0
    • BLAST Score
      2,158 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      AF030100
      94.27% cov
    • Alignment Length
      1,168 bp
    • CIGAR string
      1168M mismatches: 0 - insertions: 0 - deletions: 0
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:61889118
      NM_001001513
      1 of 2 hits reported for Rattus norvegicus.
    • Hit length
      1,576 bp
    • E Value
      0E0
    • BLAST Score
      1,681.6 bits
    • Similarity
      92.65%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      NM_001001513
      74.49% cov
    • Alignment Length
      1,184 bp
    • CIGAR string
      22MN99MN32MN25MN30MNMN58MNMN21MN68MN23MN53MN5MN29MN47MN24MN25MN29MN38MN34MI2MD11MN3MN9MIN3M3IN3MI3MD5MN2MD2MI8MN7MN15MN2MN4MN6MN11MI5MN2MN11MN5MNMN5MI16MN2MI3MDNMN6MI4MN5MN9MN2M2N2MN6MN15MN2MN2MD3MD4MN4MN3MDMDN4M3I4MDMI2MN4MN5MN6MN6MDMIN4MN25MN30MN9MN5MN3MN109M mismatches: 61 - insertions: 16 - deletions: 10
Occurrence
20 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
225
Type
peptide
Locations
Detailed Description, Drawings, Summary

Declared organism:
Homo sapiens

Determined organism:
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:33438584
      NP_035744
      1 of 3 hits reported for Mus musculus.
    • Hit length
      249 aa
    • E Value
      4.89E-126
    • BLAST Score
      454.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NP_035744
      90.36% cov
    • Alignment Length
      225 aa
    • CIGAR string
      225M mismatches: 0 - insertions: 0 - deletions: 0
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:61889119
      NP_001001513
      1 of 2 hits reported for Rattus norvegicus.
    • Hit length
      249 aa
    • E Value
      1.98E-111
    • BLAST Score
      406.4 bits
    • Similarity
      98.03%
    • Coverage
      90.22%
    • Alignment (schematic)

      SEQ ID NO 2
      90.22% cov
      NP_001001513
      81.53% cov
    • Alignment Length
      203 aa
    • CIGAR string
      22H18MN10MN18M2N19MN133M mismatches: 5 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332251073
      XP_003274671
    • Hit length
      249 aa
    • E Value
      1.15E-103
    • BLAST Score
      380.6 bits
    • Similarity
      93.78%
    • Coverage
      92.89%
    • Alignment (schematic)

      SEQ ID NO 2
      92.89% cov
      XP_003274671
      83.94% cov
    • Alignment Length
      209 aa
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:4507597
      NP_003800
      1 of 2 hits reported for Homo sapiens.
    • Hit length
      249 aa
    • E Value
      3.24E-103
    • BLAST Score
      379 bits
    • Similarity
      93.3%
    • Coverage
      92.89%
    • Alignment (schematic)

      SEQ ID NO 2
      92.89% cov
      NP_003800
      83.94% cov
    • Alignment Length
      209 aa
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:326806994
      NP_001192064
      1 of 2 hits reported for Macaca mulatta.
    • Hit length
      249 aa
    • E Value
      1.44E-102
    • BLAST Score
      377.1 bits
    • Similarity
      93.3%
    • Coverage
      92.89%
    • Alignment (schematic)

      SEQ ID NO 2
      92.89% cov
      NP_001192064
      83.94% cov
    • Alignment Length
      209 aa
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:326807006
      NP_001192068
    • Hit length
      249 aa
    • E Value
      8.47E-102
    • BLAST Score
      374.4 bits
    • Similarity
      92.34%
    • Coverage
      92.89%
    • Alignment (schematic)

      SEQ ID NO 2
      92.89% cov
      NP_001192068
      83.94% cov
    • Alignment Length
      209 aa
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:162951813
      NP_001106161
    • Hit length
      248 aa
    • E Value
      4.46E-99
    • BLAST Score
      365.5 bits
    • Similarity
      91.87%
    • Coverage
      92.89%
    • Alignment (schematic)

      SEQ ID NO 2
      92.89% cov
      NP_001106161
      83.87% cov
    • Alignment Length
      209 aa
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:326937447
      NP_001192089
    • Hit length
      249 aa
    • E Value
      1.69E-97
    • BLAST Score
      360.1 bits
    • Similarity
      92.08%
    • Coverage
      89.78%
    • Alignment (schematic)

      SEQ ID NO 2
      89.78% cov
      NP_001192089
      81.12% cov
    • Alignment Length
      202 aa
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:320380309
      ADW27168
    • Hit length
      248 aa
    • E Value
      5.01E-96
    • BLAST Score
      355.1 bits
    • Similarity
      86.22%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      ADW27168
      90.32% cov
    • Alignment Length
      225 aa
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297699914
      XP_002827026
    • Hit length
      313 aa
    • E Value
      1.09E-95
    • BLAST Score
      354 bits
    • Similarity
      90.05%
    • Coverage
      92.89%
    • Alignment (schematic)

      SEQ ID NO 2
      92.89% cov
      XP_002827026
      67.41% cov
    • Alignment Length
      211 aa
Occurrence
36 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
3
Length
1,373
Type
nucleotide
Locations
Detailed Description, Summary

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:23510442
      NM_003809
      1 of 7 hits reported for Homo sapiens.
    • Hit length
      1,407 bp
    • E Value
      0E0
    • BLAST Score
      2,481.2 bits
    • Similarity
      99.85%
    • Coverage
      98.25%
    • Alignment (schematic)

      SEQ ID NO 3
      98.25% cov
      NM_003809
      95.88% cov
    • Alignment Length
      1,349 bp
    • CIGAR string
      24H680MN167MN500M mismatches: 2 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:326806974
      NM_001205129
    • Hit length
      1,387 bp
    • E Value
      0E0
    • BLAST Score
      2,459 bits
    • Similarity
      99.56%
    • Coverage
      98.25%
    • Alignment (schematic)

      SEQ ID NO 3
      98.25% cov
      NM_001205129
      97.33% cov
    • Alignment Length
      1,350 bp
    • CIGAR string
      24H680MN167MN51MN19MN108MI306MN13M mismatches: 5 - insertions: 1 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332251072
      XM_003274623
    • Hit length
      1,825 bp
    • E Value
      0E0
    • BLAST Score
      2,353.8 bits
    • Similarity
      98.15%
    • Coverage
      98.25%
    • Alignment (schematic)

      SEQ ID NO 3
      98.25% cov
      XM_003274623
      73.92% cov
    • Alignment Length
      1,350 bp
    • CIGAR string
      24H39MN169MN115MN51MN257MN44MN86MN14MN11MN52M2NMN27MN17MN23MN70MN31MN3MI4MN65MN52MD54MN53MN26MN4MN57M mismatches: 23 - insertions: 1 - deletions: 1
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:326806993
      NM_001205135
      1 of 2 hits reported for Macaca mulatta.
    • Hit length
      1,355 bp
    • E Value
      0E0
    • BLAST Score
      2,285.4 bits
    • Similarity
      97.54%
    • Coverage
      97.23%
    • Alignment (schematic)

      SEQ ID NO 3
      97.23% cov
      NM_001205135
      98.75% cov
    • Alignment Length
      1,340 bp
    • CIGAR string
      24H209M2N61MN11MN18MN10MNMN8MN114MN11MN86MN50MN44MN41MN2MN20MN29MN14MN8MN79MI41MNMN5MN11MNI7MN15MN53MN47MDMI5MI72MD203MI30M14H mismatches: 26 - insertions: 5 - deletions: 2
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297699913
      XM_002826980
    • Hit length
      3,490 bp
    • E Value
      0E0
    • BLAST Score
      2,137.7 bits
    • Similarity
      96.35%
    • Coverage
      94.17%
    • Alignment (schematic)

      SEQ ID NO 3
      94.17% cov
      XM_002826980
      37.51% cov
    • Alignment Length
      1,316 bp
    • CIGAR string
      80H4MIMN23MI124MN29MIMI2MI3M2D2MIMNMI2MN52MI3MI4MN2MI9MN119MN233MN167MN29MN12MN3M2N23MN78MN23MN5MI67MN92M2IM6IM4I32MN40MDM4D79M mismatches: 18 - insertions: 23 - deletions: 7
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:326807005
      NM_001205139
    • Hit length
      1,389 bp
    • E Value
      0E0
    • BLAST Score
      2,023.2 bits
    • Similarity
      93.74%
    • Coverage
      98.25%
    • Alignment (schematic)

      SEQ ID NO 3
      98.25% cov
      NM_001205139
      97.26% cov
    • Alignment Length
      1,357 bp
    • CIGAR string
      24H4MI17MN23MI43MN17MN38MN3MN50MN8M2N23MN11MN6MN31MN19MN2MN16MN12MNMN40MN10MI2MD6MN8MN11MN17MN11MN66MN10MN8MN94M2N26MN5MN5MNMN3MN10MNMN34M2N7MN17MN32MN58M2N5MNMNMD8M2N9MN17MNI5MN2MIMD13MN28MN11MNMN10MN28MD8MNMN8MN5MI10MN18MN7MN2MN14MN7M2I8MN51MN16MN9MN19MN12M2D12MN10MN20MN10MN79M mismatches: 71 - insertions: 8 - deletions: 6
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:326937446
      NM_001205160
    • Hit length
      1,365 bp
    • E Value
      0E0
    • BLAST Score
      1,592.9 bits
    • Similarity
      88.35%
    • Coverage
      98.25%
    • Alignment (schematic)

      SEQ ID NO 3
      98.25% cov
      NM_001205160
      97.36% cov
    • Alignment Length
      1,365 bp
    • CIGAR string
      24H145MN8MN30MN13MN9M2N4MN17MN12MN4MI2MD30MNIMD21MN13MIMDMN6MN5MN5MN21MN25MN8MN5MN2MN10MNI2MD6MN20MN5MN8MN17MN4MN14MN3MN8M2N9MN6MN2MN7MN86M4N21MN2MN11MN2MN2MN23MN24MN34MN23MN20MN11MN23M6N2M2N12MNMN5MNMN11MN6MNI19MN3MN4MNM2NMN20MDMI8MN4MDMDMD8MN4MDMI12M2DM3D3M2N2MNDMI3MN3MN9M2NM4N10MN7MNMN2MN6MNMN5MN7MNMN5M2IMN6MI2MI9MN8MN2MN5MIMD11MD2MIMDMD10MN3MN5MN10MN13M2D2MDM2D3MDMDM2DM2D2M2D5MN17MNM2N8MIMD3MN2MI16MNMDMDMD61MN3M mismatches: 107 - insertions: 16 - deletions: 36
Occurrence
20 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
4
Length
284
Type
peptide
Locations
Claims, Detailed Description, Drawings, Summary

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:4507597
      NP_003800
      1 of 2 hits reported for Homo sapiens.
    • Hit length
      249 aa
    • E Value
      1.3E-138
    • BLAST Score
      497.3 bits
    • Similarity
      100%
    • Coverage
      87.68%
    • Alignment (schematic)

      SEQ ID NO 4
      87.68% cov
      NP_003800
      100% cov
    • Alignment Length
      249 aa
    • CIGAR string
      35H249M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332251073
      XP_003274671
    • Hit length
      249 aa
    • E Value
      3.18E-138
    • BLAST Score
      496.1 bits
    • Similarity
      99.6%
    • Coverage
      87.68%
    • Alignment (schematic)

      SEQ ID NO 4
      87.68% cov
      XP_003274671
      100% cov
    • Alignment Length
      249 aa
    • CIGAR string
      35H81MN167M mismatches: 1 - insertions: 0 - deletions: 0
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:326806994
      NP_001192064
      1 of 2 hits reported for Macaca mulatta.
    • Hit length
      249 aa
    • E Value
      6.25E-137
    • BLAST Score
      491.9 bits
    • Similarity
      99.2%
    • Coverage
      87.68%
    • Alignment (schematic)

      SEQ ID NO 4
      87.68% cov
      NP_001192064
      100% cov
    • Alignment Length
      249 aa
    • CIGAR string
      35H74MN3MN2MN167M mismatches: 3 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297699914
      XP_002827026
    • Hit length
      313 aa
    • E Value
      5.41E-113
    • BLAST Score
      412.1 bits
    • Similarity
      96.08%
    • Coverage
      89.08%
    • Alignment (schematic)

      SEQ ID NO 4
      89.08% cov
      XP_002827026
      81.47% cov
    • Alignment Length
      255 aa
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:74221419
      BAE42185
      1 of 2 hits reported for Mus musculus.
    • Hit length
      330 aa
    • E Value
      1.51E-111
    • BLAST Score
      407.5 bits
    • Similarity
      93.16%
    • Coverage
      92.61%
    • Alignment (schematic)

      SEQ ID NO 4
      92.61% cov
      BAE42185
      79.7% cov
    • Alignment Length
      263 aa
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:326807006
      NP_001192068
    • Hit length
      249 aa
    • E Value
      5.07E-108
    • BLAST Score
      396 bits
    • Similarity
      94.92%
    • Coverage
      83.1%
    • Alignment (schematic)

      SEQ ID NO 4
      83.1% cov
      NP_001192068
      94.78% cov
    • Alignment Length
      236 aa
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:162951813
      NP_001106161
    • Hit length
      248 aa
    • E Value
      3.76E-107
    • BLAST Score
      392.9 bits
    • Similarity
      95.18%
    • Coverage
      87.68%
    • Alignment (schematic)

      SEQ ID NO 4
      87.68% cov
      NP_001106161
      100% cov
    • Alignment Length
      249 aa
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:320380309
      ADW27168
    • Hit length
      248 aa
    • E Value
      1.58E-104
    • BLAST Score
      384 bits
    • Similarity
      88.14%
    • Coverage
      83.1%
    • Alignment (schematic)

      SEQ ID NO 4
      83.1% cov
      ADW27168
      94.76% cov
    • Alignment Length
      236 aa
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:326937447
      NP_001192089
    • Hit length
      249 aa
    • E Value
      1.25E-103
    • BLAST Score
      381.3 bits
    • Similarity
      93.17%
    • Coverage
      87.68%
    • Alignment (schematic)

      SEQ ID NO 4
      87.68% cov
      NP_001192089
      100% cov
    • Alignment Length
      249 aa
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:283972725
      ADB55597
      1 of 2 hits reported for Canis lupus familiaris.
    • Hit length
      249 aa
    • E Value
      2.58E-102
    • BLAST Score
      376.7 bits
    • Similarity
      92.8%
    • Coverage
      83.1%
    • Alignment (schematic)

      SEQ ID NO 4
      83.1% cov
      ADB55597
      94.78% cov
    • Alignment Length
      236 aa
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:61889119
      NP_001001513
    • Hit length
      249 aa
    • E Value
      2.74E-101
    • BLAST Score
      373.6 bits
    • Similarity
      91.57%
    • Coverage
      87.68%
    • Alignment (schematic)

      SEQ ID NO 4
      87.68% cov
      NP_001001513
      100% cov
    • Alignment Length
      249 aa
Occurrence
22 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
5
Length
18
Type
nucleotide
Locations
Detailed Description

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:334883173
      NG_029061
      1 of 15 hits reported for Homo sapiens.
    • Hit length
      190,369 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NG_029061
      0.01% cov
    • Alignment Length
      18 bp
    • CIGAR string
      18M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332848998
      XM_511662
    • Hit length
      1,168 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XM_511662
      1.54% cov
    • Alignment Length
      18 bp
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:309270615
      XR_105744
      1 of 9 hits reported for Mus musculus.
    • Hit length
      3,778 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XR_105744
      0.48% cov
    • Alignment Length
      18 bp
Occurrence
26 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
6
Length
6
Type
nucleotide
Locations
Detailed Description

Declared organism:
Homo sapiens

Occurrence
1477 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
7
Length
20
Type
nucleotide
Locations
Detailed Description

Declared organism:
Homo sapiens

Determined organism:
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332251072
      XM_003274623
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      1,825 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XM_003274623
      1.1% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:326937415
      NM_001205143
      1 of 7 hits reported for Bos taurus.
    • Hit length
      1,307 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NM_001205143
      1.53% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:326806974
      NM_001205129
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      1,387 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NM_001205129
      1.44% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297699913
      XM_002826980
      1 of 2 hits reported for Pongo abelii.
    • Hit length
      3,490 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XM_002826980
      0.57% cov
    • Alignment Length
      20 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297271811
      XM_001109045
      1 of 4 hits reported for Macaca mulatta.
    • Hit length
      1,305 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XM_001109045
      1.53% cov
    • Alignment Length
      20 bp
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:310750379
      NR_037146
      1 of 8 hits reported for Homo sapiens.
    • Hit length
      1,642 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NR_037146
      1.22% cov
    • Alignment Length
      20 bp
Occurrence
34 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
8
Length
20
Type
nucleotide
Locations
Detailed Description

Declared organism:
Homo sapiens

Determined organism:
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332251072
      XM_003274623
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      1,825 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XM_003274623
      1.1% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:326937446
      NM_001205160
      1 of 2 hits reported for Equus caballus.
    • Hit length
      1,365 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NM_001205160
      1.47% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:326937415
      NM_001205143
      1 of 7 hits reported for Bos taurus.
    • Hit length
      1,307 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NM_001205143
      1.53% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:326807005
      NM_001205139
      1 of 4 hits reported for Callithrix jacchus.
    • Hit length
      1,389 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NM_001205139
      1.44% cov
    • Alignment Length
      20 bp
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:326806974
      NM_001205129
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      1,387 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NM_001205129
      1.44% cov
    • Alignment Length
      20 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297699913
      XM_002826980
      1 of 2 hits reported for Pongo abelii.
    • Hit length
      3,490 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XM_002826980
      0.57% cov
    • Alignment Length
      20 bp
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:310750379
      NR_037146
      1 of 4 hits reported for Homo sapiens.
    • Hit length
      1,642 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NR_037146
      1.22% cov
    • Alignment Length
      20 bp
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:73955544
      XM_854479
      1 of 2 hits reported for Canis lupus familiaris.
    • Hit length
      750 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XM_854479
      2.67% cov
    • Alignment Length
      20 bp
Occurrence
15 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
9
Length
20
Type
nucleotide
Locations
Detailed Description

Declared organism:
Homo sapiens

Determined organism:
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332251072
      XM_003274623
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      1,825 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XM_003274623
      1.1% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:326937446
      NM_001205160
      1 of 2 hits reported for Equus caballus.
    • Hit length
      1,365 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      NM_001205160
      1.47% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:326807005
      NM_001205139
      1 of 2 hits reported for Callithrix jacchus.
    • Hit length
      1,389 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      NM_001205139
      1.44% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:326806974
      NM_001205129
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      1,387 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      NM_001205129
      1.44% cov
    • Alignment Length
      20 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297699913
      XM_002826980
      1 of 2 hits reported for Pongo abelii.
    • Hit length
      3,490 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XM_002826980
      0.57% cov
    • Alignment Length
      20 bp
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:310750379
      NR_037146
      1 of 13 hits reported for Homo sapiens.
    • Hit length
      1,642 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      NR_037146
      1.22% cov
    • Alignment Length
      20 bp
Occurrence
26 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
10
Length
18
Type
nucleotide
Locations
Detailed Description

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:334883173
      NG_029061
      1 of 15 hits reported for Homo sapiens.
    • Hit length
      190,369 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      NG_029061
      0.01% cov
    • Alignment Length
      18 bp
    • CIGAR string
      18M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332848998
      XM_511662
    • Hit length
      1,168 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XM_511662
      1.54% cov
    • Alignment Length
      18 bp
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:309270615
      XR_105744
      1 of 9 hits reported for Mus musculus.
    • Hit length
      3,778 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XR_105744
      0.48% cov
    • Alignment Length
      18 bp
Occurrence
26 times in PatSeqDB
Tools
PatSeq Finder

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