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Search for Biological Sequences disclosed in Patents

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Data obtained from: DDBJ Pat NCBI GenBank USPTO Fulltext EMBL-EBI Pat
21 sequences found in this patent (in total)

Displaying 1 - 10 of 21 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
1,233
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Hepatitis C virus

    Hepatitis C virus

    • Public DB hit
      GI:169139423
      EU370653
      1 of 20 hits reported for Hepatitis C virus.
    • Hit length
      3,221 bp
    • E Value
      0E0
    • BLAST Score
      1,452.6 bits
    • Similarity
      100%
    • Coverage
      63.75%
    • Alignment (schematic)

      SEQ ID NO 1
      63.75% cov
      EU370653
      24.4% cov
    • Alignment Length
      786 bp
    • CIGAR string
      18H786M429H mismatches: 0 - insertions: 0 - deletions: 0
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:6010587
      AF177040
      1 of 4 hits reported for synthetic construct.
    • Hit length
      9,611 bp
    • E Value
      0E0
    • BLAST Score
      1,452.6 bits
    • Similarity
      100%
    • Coverage
      63.75%
    • Alignment (schematic)

      SEQ ID NO 1
      63.75% cov
      AF177040
      8.18% cov
    • Alignment Length
      786 bp
    • CIGAR string
      18H786M429H mismatches: 0 - insertions: 0 - deletions: 0
  • Hepatitis C virus (isolate H77)

    Hepatitis C virus (isolate H77)

    • Public DB hit
      GI:2327070
      AF011751
    • Hit length
      9,599 bp
    • E Value
      0E0
    • BLAST Score
      1,452.6 bits
    • Similarity
      100%
    • Coverage
      63.75%
    • Alignment (schematic)

      SEQ ID NO 1
      63.75% cov
      AF011751
      8.19% cov
    • Alignment Length
      786 bp
Occurrence
28 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
410
Type
peptide
Locations
Claims, Detailed Description, Summary

Declared organism:
Artificial

Determined organism:
  • Hepatitis C virus

    Hepatitis C virus

    • Public DB hit
      GI:169139418
      ACA48639
      1 of 20 hits reported for Hepatitis C virus.
    • Hit length
      1,074 aa
    • E Value
      1.31E-148
    • BLAST Score
      531.6 bits
    • Similarity
      96.4%
    • Coverage
      67.8%
    • Alignment (schematic)

      SEQ ID NO 2
      67.8% cov
      ACA48639
      25.88% cov
    • Alignment Length
      278 aa
    • CIGAR string
      4H264M4NM4NM2NMN128H mismatches: 11 - insertions: 0 - deletions: 0
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:6010582
      AAF01179
      1 of 3 hits reported for synthetic construct.
    • Hit length
      3,015 aa
    • E Value
      1.57E-147
    • BLAST Score
      528.1 bits
    • Similarity
      96.4%
    • Coverage
      67.8%
    • Alignment (schematic)

      SEQ ID NO 2
      67.8% cov
      AAF01179
      9.22% cov
    • Alignment Length
      278 aa
  • Hepatitis C virus (isolate H77)

    Hepatitis C virus (isolate H77)

    • Public DB hit
      GI:2327071
      AAB67036
      1 of 2 hits reported for Hepatitis C virus (isolate H77).
    • Hit length
      3,011 aa
    • E Value
      1.79E-147
    • BLAST Score
      527.7 bits
    • Similarity
      96.4%
    • Coverage
      67.8%
    • Alignment (schematic)

      SEQ ID NO 2
      67.8% cov
      AAB67036
      9.23% cov
    • Alignment Length
      278 aa
Occurrence
28 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
3
Length
1,914
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Hepatitis C virus

    Hepatitis C virus

    • Public DB hit
      GI:169139423
      EU370653
      1 of 20 hits reported for Hepatitis C virus.
    • Hit length
      3,221 bp
    • E Value
      0E0
    • BLAST Score
      3,485.7 bits
    • Similarity
      99.89%
    • Coverage
      98.9%
    • Alignment (schematic)

      SEQ ID NO 3
      98.9% cov
      EU370653
      58.77% cov
    • Alignment Length
      1,893 bp
    • CIGAR string
      18H414MNMN1476M3H mismatches: 2 - insertions: 0 - deletions: 0
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:6010587
      AF177040
      1 of 4 hits reported for synthetic construct.
    • Hit length
      9,611 bp
    • E Value
      0E0
    • BLAST Score
      3,485.7 bits
    • Similarity
      99.89%
    • Coverage
      98.9%
    • Alignment (schematic)

      SEQ ID NO 3
      98.9% cov
      AF177040
      19.7% cov
    • Alignment Length
      1,893 bp
    • CIGAR string
      18H414MNMN1476M3H mismatches: 2 - insertions: 0 - deletions: 0
  • Hepatitis C virus (isolate H77)

    Hepatitis C virus (isolate H77)

    • Public DB hit
      GI:2327070
      AF011751
    • Hit length
      9,599 bp
    • E Value
      0E0
    • BLAST Score
      3,485.7 bits
    • Similarity
      99.89%
    • Coverage
      98.9%
    • Alignment (schematic)

      SEQ ID NO 3
      98.9% cov
      AF011751
      19.72% cov
    • Alignment Length
      1,893 bp
Occurrence
28 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
4
Length
637
Type
peptide
Locations
Detailed Description, Summary

Declared organism:
Artificial

Determined organism:
  • Hepatitis C virus

    Hepatitis C virus

    • Public DB hit
      GI:169139424
      ACA48642
      1 of 21 hits reported for Hepatitis C virus.
    • Hit length
      1,074 aa
    • E Value
      0E0
    • BLAST Score
      1,301.2 bits
    • Similarity
      100%
    • Coverage
      99.06%
    • Alignment (schematic)

      SEQ ID NO 4
      99.06% cov
      ACA48642
      58.75% cov
    • Alignment Length
      631 aa
    • CIGAR string
      6H138MN492M mismatches: 1 - insertions: 0 - deletions: 0
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:6010584
      AAF01180
      1 of 2 hits reported for synthetic construct.
    • Hit length
      3,015 aa
    • E Value
      0E0
    • BLAST Score
      1,292.3 bits
    • Similarity
      100%
    • Coverage
      99.06%
    • Alignment (schematic)

      SEQ ID NO 4
      99.06% cov
      AAF01180
      20.93% cov
    • Alignment Length
      631 aa
  • Hepatitis C virus (isolate H77)

    Hepatitis C virus (isolate H77)

    • Public DB hit
      GI:2327071
      AAB67036
    • Hit length
      3,011 aa
    • E Value
      0E0
    • BLAST Score
      1,291.2 bits
    • Similarity
      100%
    • Coverage
      99.06%
    • Alignment (schematic)

      SEQ ID NO 4
      99.06% cov
      AAB67036
      20.96% cov
    • Alignment Length
      631 aa
Occurrence
28 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
5
Length
1,491
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Hepatitis C virus subtype 1a

    Hepatitis C virus subtype 1a

    • Public DB hit
      GI:2316097
      AF009606
      1 of 2 hits reported for Hepatitis C virus subtype 1a.
    • Hit length
      9,646 bp
    • E Value
      0E0
    • BLAST Score
      1,857 bits
    • Similarity
      100%
    • Coverage
      67.4%
    • Alignment (schematic)

      SEQ ID NO 5
      67.4% cov
      AF009606
      10.42% cov
    • Alignment Length
      1,005 bp
    • CIGAR string
      485H1005M1H mismatches: 0 - insertions: 0 - deletions: 0
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:255988474
      GQ433349
      1 of 4 hits reported for synthetic construct.
    • Hit length
      1,088 bp
    • E Value
      0E0
    • BLAST Score
      1,855.2 bits
    • Similarity
      100%
    • Coverage
      67.34%
    • Alignment (schematic)

      SEQ ID NO 5
      67.34% cov
      GQ433349
      92.28% cov
    • Alignment Length
      1,004 bp
    • CIGAR string
      486H1004M1H mismatches: 0 - insertions: 0 - deletions: 0
  • Hepatitis C virus

    Hepatitis C virus

    • Public DB hit
      GI:329972
      M62381
      1 of 15 hits reported for Hepatitis C virus.
    • Hit length
      2,610 bp
    • E Value
      0E0
    • BLAST Score
      1,845.9 bits
    • Similarity
      99.8%
    • Coverage
      67.4%
    • Alignment (schematic)

      SEQ ID NO 5
      67.4% cov
      M62381
      38.51% cov
    • Alignment Length
      1,005 bp
    • CIGAR string
      485H183MN422MN398M1H mismatches: 2 - insertions: 0 - deletions: 0
  • Recombinant Hepatitis C virus H77(5'UTR-NS2)/JFH1_V787A,Q1247L

    Recombinant Hepatitis C virus H77(5'UTR-NS2)/JFH1_V787A,Q1247L

    • Public DB hit
      GI:329666313
      JF343780
    • Hit length
      9,667 bp
    • E Value
      0E0
    • BLAST Score
      1,823.8 bits
    • Similarity
      99.4%
    • Coverage
      67.4%
    • Alignment (schematic)

      SEQ ID NO 5
      67.4% cov
      JF343780
      10.4% cov
    • Alignment Length
      1,005 bp
  • Recombinant Hepatitis C virus H77C/JFH-1

    Recombinant Hepatitis C virus H77C/JFH-1

    • Public DB hit
      GI:165873794
      EU363761
    • Hit length
      9,666 bp
    • E Value
      0E0
    • BLAST Score
      1,823.8 bits
    • Similarity
      99.4%
    • Coverage
      67.4%
    • Alignment (schematic)

      SEQ ID NO 5
      67.4% cov
      EU363761
      10.4% cov
    • Alignment Length
      1,005 bp
  • Hepatitis C virus (isolate H77)

    Hepatitis C virus (isolate H77)

    • Public DB hit
      GI:2327074
      AF011753
      1 of 2 hits reported for Hepatitis C virus (isolate H77).
    • Hit length
      9,599 bp
    • E Value
      0E0
    • BLAST Score
      1,823.8 bits
    • Similarity
      99.4%
    • Coverage
      67.4%
    • Alignment (schematic)

      SEQ ID NO 5
      67.4% cov
      AF011753
      10.47% cov
    • Alignment Length
      1,005 bp
Occurrence
28 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
6
Length
496
Type
peptide
Locations
Detailed Description, Summary

Declared organism:
Artificial

Determined organism:
  • Recombinant Hepatitis C virus H77(5'UTR-NS2)/JFH1_V787A,Q1247L

    Recombinant Hepatitis C virus H77(5'UTR-NS2)/JFH1_V787A,Q1247L

    • Public DB hit
      GI:329666314
      AEB71612
    • Hit length
      3,029 aa
    • E Value
      0E0
    • BLAST Score
      1,017.7 bits
    • Similarity
      93.16%
    • Coverage
      98.79%
    • Alignment (schematic)

      SEQ ID NO 6
      98.79% cov
      AEB71612
      17.37% cov
    • Alignment Length
      526 aa
    • CIGAR string
      6H156M36I7MN326M mismatches: 1 - insertions: 36 - deletions: 0
  • Recombinant Hepatitis C virus H77C/JFH-1

    Recombinant Hepatitis C virus H77C/JFH-1

    • Public DB hit
      GI:165873795
      ABY68012
    • Hit length
      3,029 aa
    • E Value
      0E0
    • BLAST Score
      1,017.7 bits
    • Similarity
      93.16%
    • Coverage
      98.79%
    • Alignment (schematic)

      SEQ ID NO 6
      98.79% cov
      ABY68012
      17.37% cov
    • Alignment Length
      526 aa
    • CIGAR string
      6H156M36I7MN326M mismatches: 1 - insertions: 36 - deletions: 0
  • Hepatitis C virus

    Hepatitis C virus

    • Public DB hit
      GI:22129793
      NP_671491
      1 of 13 hits reported for Hepatitis C virus.
    • Hit length
      3,011 aa
    • E Value
      0E0
    • BLAST Score
      1,016.1 bits
    • Similarity
      93.16%
    • Coverage
      98.79%
    • Alignment (schematic)

      SEQ ID NO 6
      98.79% cov
      NP_671491
      17.47% cov
    • Alignment Length
      526 aa
    • CIGAR string
      6H156M36I334M mismatches: 0 - insertions: 36 - deletions: 0
  • Hepatitis C virus (isolate H77)

    Hepatitis C virus (isolate H77)

    • Public DB hit
      GI:2327071
      AAB67036
      1 of 3 hits reported for Hepatitis C virus (isolate H77).
    • Hit length
      3,011 aa
    • E Value
      0E0
    • BLAST Score
      1,014.6 bits
    • Similarity
      93.16%
    • Coverage
      98.79%
    • Alignment (schematic)

      SEQ ID NO 6
      98.79% cov
      AAB67036
      17.47% cov
    • Alignment Length
      526 aa
  • Hepatitis C virus (isolate H)

    Hepatitis C virus (isolate H)

    • Public DB hit
      GI:130461
      P27958
    • Hit length
      3,011 aa
    • E Value
      0E0
    • BLAST Score
      1,004.6 bits
    • Similarity
      92.78%
    • Coverage
      98.79%
    • Alignment (schematic)

      SEQ ID NO 6
      98.79% cov
      P27958
      17.47% cov
    • Alignment Length
      526 aa
  • Hepatitis C virus subtype 1a

    Hepatitis C virus subtype 1a

    • Public DB hit
      GI:9930557
      AAG02099
    • Hit length
      3,011 aa
    • E Value
      0E0
    • BLAST Score
      1,001.5 bits
    • Similarity
      92.4%
    • Coverage
      98.79%
    • Alignment (schematic)

      SEQ ID NO 6
      98.79% cov
      AAG02099
      17.47% cov
    • Alignment Length
      526 aa
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:115382075
      ABI96510
      1 of 4 hits reported for synthetic construct.
    • Hit length
      577 aa
    • E Value
      0E0
    • BLAST Score
      996.1 bits
    • Similarity
      92.8%
    • Coverage
      99.19%
    • Alignment (schematic)

      SEQ ID NO 6
      99.19% cov
      ABI96510
      91.51% cov
    • Alignment Length
      528 aa
Occurrence
28 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
7
Length
483
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
Occurrence
28 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
8
Length
160
Type
peptide
Locations
Detailed Description, Summary

Declared organism:
Artificial

Determined organism:
Occurrence
28 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
9
Length
6
Type
peptide
Locations
Claims, Detailed Description, Summary

Declared organism:
Artificial

Determined organism:
  • Saccoglossus kowalevskii

    Saccoglossus kowalevskii

    • Public DB hit
      GI:291231445
      XP_002735662
    • Hit length
      278 aa
    • E Value
      5.6E3
    • BLAST Score
      23.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XP_002735662
      2.16% cov
    • Alignment Length
      6 aa
    • CIGAR string
      6M mismatches: 0 - insertions: 0 - deletions: 0
  • Desulfurococcus kamchatkensis 1221n

    Desulfurococcus kamchatkensis 1221n

    • Public DB hit
      GI:218883938
      YP_002428320
    • Hit length
      261 aa
    • E Value
      5.6E3
    • BLAST Score
      23.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      YP_002428320
      2.3% cov
    • Alignment Length
      6 aa
    • CIGAR string
      6M mismatches: 0 - insertions: 0 - deletions: 0
  • Drosophila melanogaster

    Drosophila melanogaster

    • Public DB hit
      GI:17136734
      NP_476874
    • Hit length
      267 aa
    • E Value
      5.6E3
    • BLAST Score
      23.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      NP_476874
      2.25% cov
    • Alignment Length
      6 aa
    • CIGAR string
      6M mismatches: 0 - insertions: 0 - deletions: 0
  • Verticillium alfalfae VaMs.102

    Verticillium alfalfae VaMs.102

    • Public DB hit
      GI:302418114
      XP_003006888
    • Hit length
      426 aa
    • E Value
      7.73E3
    • BLAST Score
      22.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XP_003006888
      1.41% cov
    • Alignment Length
      6 aa
  • Providencia rustigianii DSM 4541

    Providencia rustigianii DSM 4541

    • Public DB hit
      GI:282599820
      ZP_05972016
    • Hit length
      568 aa
    • E Value
      9.2E3
    • BLAST Score
      22.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      ZP_05972016
      1.06% cov
    • Alignment Length
      6 aa
  • Aspergillus terreus NIH2624

    Aspergillus terreus NIH2624

    • Public DB hit
      GI:115437050
      XP_001217713
    • Hit length
      1,414 aa
    • E Value
      9.46E3
    • BLAST Score
      22.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XP_001217713
      0.42% cov
    • Alignment Length
      6 aa
  • Schistosoma mansoni

    Schistosoma mansoni

    • Public DB hit
      GI:256078197
      XP_002575383
      1 of 2 hits reported for Schistosoma mansoni.
    • Hit length
      721 aa
    • E Value
      1.1E4
    • BLAST Score
      22.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XP_002575383
      0.83% cov
    • Alignment Length
      6 aa
  • Culex quinquefasciatus

    Culex quinquefasciatus

    • Public DB hit
      GI:170066985
      XP_001868300
    • Hit length
      566 aa
    • E Value
      1.28E4
    • BLAST Score
      21.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XP_001868300
      1.06% cov
    • Alignment Length
      6 aa
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297694472
      XP_002824497
    • Hit length
      759 aa
    • E Value
      1.32E4
    • BLAST Score
      21.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XP_002824497
      0.79% cov
    • Alignment Length
      6 aa
  • Oryctolagus cuniculus

    Oryctolagus cuniculus

    • Public DB hit
      GI:291414529
      XP_002723510
    • Hit length
      759 aa
    • E Value
      1.32E4
    • BLAST Score
      21.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XP_002723510
      0.79% cov
    • Alignment Length
      6 aa
  • Cyanothece sp. PCC 7425

    Cyanothece sp. PCC 7425

    • Public DB hit
      GI:220908205
      YP_002483516
    • Hit length
      597 aa
    • E Value
      1.32E4
    • BLAST Score
      21.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      YP_002483516
      1.01% cov
    • Alignment Length
      6 aa
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332261497
      XP_003279808
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      759 aa
    • E Value
      1.37E4
    • BLAST Score
      21.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XP_003279808
      0.79% cov
    • Alignment Length
      6 aa
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:57165424
      NP_001008895
    • Hit length
      759 aa
    • E Value
      1.37E4
    • BLAST Score
      21.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      NP_001008895
      0.79% cov
    • Alignment Length
      6 aa
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297274850
      XP_002808198
    • Hit length
      713 aa
    • E Value
      1.46E4
    • BLAST Score
      21.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XP_002808198
      0.84% cov
    • Alignment Length
      6 aa
  • Botrytis cinerea B05.10

    Botrytis cinerea B05.10

    • Public DB hit
      GI:154297299
      XP_001549077
    • Hit length
      460 aa
    • E Value
      1.47E4
    • BLAST Score
      21.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XP_001549077
      1.3% cov
    • Alignment Length
      6 aa
  • Burkholderia sp. Ch1-1

    Burkholderia sp. Ch1-1

    • Public DB hit
      GI:296163381
      ZP_06846138
    • Hit length
      1,470 aa
    • E Value
      1.63E4
    • BLAST Score
      21.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      ZP_06846138
      0.41% cov
    • Alignment Length
      6 aa
  • Phytophthora infestans T30-4

    Phytophthora infestans T30-4

    • Public DB hit
      GI:301122311
      XP_002908882
    • Hit length
      232 aa
    • E Value
      1.63E4
    • BLAST Score
      21.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XP_002908882
      2.59% cov
    • Alignment Length
      6 aa
  • Desulfurococcus mucosus DSM 2162

    Desulfurococcus mucosus DSM 2162

    • Public DB hit
      GI:320100711
      YP_004176303
    • Hit length
      269 aa
    • E Value
      1.67E4
    • BLAST Score
      21.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      YP_004176303
      2.23% cov
    • Alignment Length
      6 aa
  • Rhodopseudomonas palustris BisB5

    Rhodopseudomonas palustris BisB5

    • Public DB hit
      GI:91976523
      YP_569182
    • Hit length
      530 aa
    • E Value
      1.73E4
    • BLAST Score
      21.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      YP_569182
      1.13% cov
    • Alignment Length
      6 aa
  • Chaetomium globosum CBS 148.51

    Chaetomium globosum CBS 148.51

    • Public DB hit
      GI:116201805
      XP_001226714
    • Hit length
      777 aa
    • E Value
      1.77E4
    • BLAST Score
      21.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XP_001226714
      0.77% cov
    • Alignment Length
      6 aa
  • Metarhizium acridum CQMa 102

    Metarhizium acridum CQMa 102

    • Public DB hit
      GI:322693679
      EFY85531
    • Hit length
      650 aa
    • E Value
      1.88E4
    • BLAST Score
      21.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      EFY85531
      0.92% cov
    • Alignment Length
      6 aa
  • Propionibacterium acnes J139

    Propionibacterium acnes J139

    • Public DB hit
      GI:282854721
      ZP_06264056
    • Hit length
      1,120 aa
    • E Value
      1.92E4
    • BLAST Score
      21.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      ZP_06264056
      0.54% cov
    • Alignment Length
      6 aa
Occurrence
233 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
10
Length
9
Type
peptide
Locations
Claims, Detailed Description, Summary

Declared organism:
Artificial

Determined organism:
  • unspecified (taxid:0)

    unspecified (taxid:0)

    • Public DB hit
      GI:321159981
      3PIK_A
    • Hit length
      446 aa
    • E Value
      2.23E0
    • BLAST Score
      35 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      3PIK_A
      2.02% cov
    • Alignment Length
      9 aa
    • CIGAR string
      9M mismatches: 0 - insertions: 0 - deletions: 0
  • Polysphondylium pallidum PN500

    Polysphondylium pallidum PN500

    • Public DB hit
      GI:281210433
      EFA84599
    • Hit length
      617 aa
    • E Value
      5.4E0
    • BLAST Score
      33.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      EFA84599
      1.46% cov
    • Alignment Length
      9 aa
    • CIGAR string
      9M mismatches: 0 - insertions: 0 - deletions: 0
  • Sorghum bicolor

    Sorghum bicolor

    • Public DB hit
      GI:242051617
      XP_002454954
    • Hit length
      319 aa
    • E Value
      1.23E1
    • BLAST Score
      32.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XP_002454954
      2.82% cov
    • Alignment Length
      9 aa
    • CIGAR string
      9M mismatches: 0 - insertions: 0 - deletions: 0
  • Daphnia pulex

    Daphnia pulex

    • Public DB hit
      GI:321468722
      EFX79706
    • Hit length
      1,660 aa
    • E Value
      1.46E1
    • BLAST Score
      32.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      EFX79706
      0.54% cov
    • Alignment Length
      9 aa
  • Dictyostelium discoideum AX4

    Dictyostelium discoideum AX4

    • Public DB hit
      GI:66817430
      XP_642568
    • Hit length
      463 aa
    • E Value
      1.54E1
    • BLAST Score
      32 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XP_642568
      1.94% cov
    • Alignment Length
      9 aa
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:122919923
      2DE0_X
    • Hit length
      526 aa
    • E Value
      2.14E1
    • BLAST Score
      31.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      2DE0_X
      1.71% cov
    • Alignment Length
      9 aa
  • Oryza sativa Indica Group

    Oryza sativa Indica Group

    • Public DB hit
      GI:218198612
      EEC81039
    • Hit length
      570 aa
    • E Value
      5.17E1
    • BLAST Score
      30.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      EEC81039
      1.58% cov
    • Alignment Length
      9 aa
  • Mycobacterium tuberculosis

    Mycobacterium tuberculosis

    • Public DB hit
      GI:134104578
      2ISZ_A
      1 of 2 hits reported for Mycobacterium tuberculosis.
    • Hit length
      157 aa
    • E Value
      7.4E1
    • BLAST Score
      29.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      2ISZ_A
      5.73% cov
    • Alignment Length
      9 aa
  • Vibrio vulnificus

    Vibrio vulnificus

    • Public DB hit
      GI:167013301
      2RET_A
    • Hit length
      103 aa
    • E Value
      2E2
    • BLAST Score
      28.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      2RET_A
      8.74% cov
    • Alignment Length
      9 aa
Occurrence
59 times in PatSeqDB
Tools
PatSeq Finder

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