Loading...

Search for Biological Sequences disclosed in Patents

Discover PatSeq Finder: Search and analyse similar sequence matches in the Lens PatSeq database effortlessly using PatSeq Finder. Scan 480M+ biological sequences disclosed in patents on a privacy-assured platform and give your IP strategy the edge.

View PatSeq Dismiss
Data obtained from: DDBJ Pat NCBI GenBank USPTO Fulltext EMBL-EBI Pat
8 sequences found in this patent (in total)

Displaying 8 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
2,379
Type
nucleotide
Locations
Detailed Description, Drawings

Declared organism:
Neisseria gonorrhoeae

Determined organism:
  • Neisseria gonorrhoeae

    Neisseria gonorrhoeae

    • Public DB hit
      GI:1766041
      U81959
    • Hit length
      2,379 bp
    • E Value
      0E0
    • BLAST Score
      4,394.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      U81959
      100% cov
    • Alignment Length
      2,379 bp
    • CIGAR string
      2379M mismatches: 0 - insertions: 0 - deletions: 0
  • Neisseria gonorrhoeae TCDC-NG08107

    Neisseria gonorrhoeae TCDC-NG08107

    • Public DB hit
      GI:317163438
      CP002440
    • Hit length
      2,154,835 bp
    • E Value
      0E0
    • BLAST Score
      4,333.4 bits
    • Similarity
      99.54%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      CP002440
      0.11% cov
    • Alignment Length
      2,379 bp
    • CIGAR string
      244MN20MNMN4MN41MN104MN674MN56MN68MN41MN1039MN76M mismatches: 11 - insertions: 0 - deletions: 0
  • Neisseria gonorrhoeae NCCP11945

    Neisseria gonorrhoeae NCCP11945

    • Public DB hit
      GI:193932879
      CP001050
    • Hit length
      2,232,025 bp
    • E Value
      0E0
    • BLAST Score
      4,333.4 bits
    • Similarity
      99.54%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      CP001050
      0.11% cov
    • Alignment Length
      2,379 bp
    • CIGAR string
      244MN20MNMN4MN41MN104MN674MN56MN68MN41MN1039MN76M mismatches: 11 - insertions: 0 - deletions: 0
  • Neisseria gonorrhoeae FA 1090

    Neisseria gonorrhoeae FA 1090

    • Public DB hit
      GI:59717368
      AE004969
    • Hit length
      2,153,922 bp
    • E Value
      0E0
    • BLAST Score
      4,294.6 bits
    • Similarity
      99.24%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      AE004969
      0.11% cov
    • Alignment Length
      2,380 bp
  • Neisseria meningitidis FAM18

    Neisseria meningitidis FAM18

    • Public DB hit
      GI:120865607
      AM421808
    • Hit length
      2,194,961 bp
    • E Value
      0E0
    • BLAST Score
      3,759.1 bits
    • Similarity
      95.13%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      AM421808
      0.11% cov
    • Alignment Length
      2,401 bp
  • Neisseria meningitidis

    Neisseria meningitidis

    • Public DB hit
      GI:2460280
      AF021245
    • Hit length
      2,394 bp
    • E Value
      0E0
    • BLAST Score
      3,753.5 bits
    • Similarity
      95.09%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      AF021245
      100% cov
    • Alignment Length
      2,401 bp
  • Neisseria meningitidis Z2491

    Neisseria meningitidis Z2491

    • Public DB hit
      GI:30407145
      AL157959
    • Hit length
      2,184,406 bp
    • E Value
      0E0
    • BLAST Score
      3,736.9 bits
    • Similarity
      94.96%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      AL157959
      0.11% cov
    • Alignment Length
      2,401 bp
  • Neisseria meningitidis NZ-05/33

    Neisseria meningitidis NZ-05/33

    • Public DB hit
      GI:325207054
      CP002424
    • Hit length
      2,248,966 bp
    • E Value
      0E0
    • BLAST Score
      3,714.7 bits
    • Similarity
      94.79%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      CP002424
      0.11% cov
    • Alignment Length
      2,401 bp
  • Neisseria meningitidis M01-240149

    Neisseria meningitidis M01-240149

    • Public DB hit
      GI:325201197
      CP002421
    • Hit length
      2,223,518 bp
    • E Value
      0E0
    • BLAST Score
      3,714.7 bits
    • Similarity
      94.79%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      CP002421
      0.11% cov
    • Alignment Length
      2,401 bp
  • Neisseria meningitidis alpha710

    Neisseria meningitidis alpha710

    • Public DB hit
      GI:308388224
      CP001561
    • Hit length
      2,242,947 bp
    • E Value
      0E0
    • BLAST Score
      3,714.7 bits
    • Similarity
      94.79%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      CP001561
      0.11% cov
    • Alignment Length
      2,401 bp
  • Neisseria meningitidis WUE 2594

    Neisseria meningitidis WUE 2594

    • Public DB hit
      GI:319409534
      FR774048
    • Hit length
      2,227,255 bp
    • E Value
      0E0
    • BLAST Score
      3,698.1 bits
    • Similarity
      94.67%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      FR774048
      0.11% cov
    • Alignment Length
      2,401 bp
  • Neisseria meningitidis M04-240196

    Neisseria meningitidis M04-240196

    • Public DB hit
      GI:325205106
      CP002423
    • Hit length
      2,250,449 bp
    • E Value
      0E0
    • BLAST Score
      3,653.8 bits
    • Similarity
      94.34%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      CP002423
      0.11% cov
    • Alignment Length
      2,402 bp
  • Neisseria meningitidis M01-240355

    Neisseria meningitidis M01-240355

    • Public DB hit
      GI:325203134
      CP002422
    • Hit length
      2,287,777 bp
    • E Value
      0E0
    • BLAST Score
      3,653.8 bits
    • Similarity
      94.34%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      CP002422
      0.1% cov
    • Alignment Length
      2,402 bp
  • Neisseria meningitidis 8013

    Neisseria meningitidis 8013

    • Public DB hit
      GI:261391559
      FM999788
    • Hit length
      2,277,550 bp
    • E Value
      0E0
    • BLAST Score
      3,653.8 bits
    • Similarity
      94.34%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      FM999788
      0.11% cov
    • Alignment Length
      2,401 bp
  • Neisseria meningitidis alpha14

    Neisseria meningitidis alpha14

    • Public DB hit
      GI:254667570
      AM889136
    • Hit length
      2,145,295 bp
    • E Value
      0E0
    • BLAST Score
      3,609.5 bits
    • Similarity
      94%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      AM889136
      0.11% cov
    • Alignment Length
      2,401 bp
  • Neisseria meningitidis H44/76

    Neisseria meningitidis H44/76

    • Public DB hit
      GI:325199235
      CP002420
    • Hit length
      2,240,883 bp
    • E Value
      0E0
    • BLAST Score
      3,598.4 bits
    • Similarity
      93.92%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      CP002420
      0.11% cov
    • Alignment Length
      2,402 bp
  • Neisseria meningitidis G2136

    Neisseria meningitidis G2136

    • Public DB hit
      GI:325197306
      CP002419
    • Hit length
      2,184,862 bp
    • E Value
      0E0
    • BLAST Score
      3,598.4 bits
    • Similarity
      93.92%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      CP002419
      0.11% cov
    • Alignment Length
      2,401 bp
  • Neisseria meningitidis MC58

    Neisseria meningitidis MC58

    • Public DB hit
      GI:66731897
      AE002098
    • Hit length
      2,272,360 bp
    • E Value
      0E0
    • BLAST Score
      3,598.4 bits
    • Similarity
      93.92%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      AE002098
      0.11% cov
    • Alignment Length
      2,402 bp
  • Neisseria meningitidis 053442

    Neisseria meningitidis 053442

    • Public DB hit
      GI:161594571
      CP000381
    • Hit length
      2,153,416 bp
    • E Value
      0E0
    • BLAST Score
      3,526.4 bits
    • Similarity
      93.39%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      CP000381
      0.11% cov
    • Alignment Length
      2,404 bp
  • Neisseria lactamica 020-06

    Neisseria lactamica 020-06

    • Public DB hit
      GI:313004821
      FN995097
    • Hit length
      2,220,606 bp
    • E Value
      0E0
    • BLAST Score
      3,040.7 bits
    • Similarity
      92%
    • Coverage
      91.13%
    • Alignment (schematic)

      SEQ ID NO 1
      91.13% cov
      FN995097
      0.1% cov
    • Alignment Length
      2,174 bp
Occurrence
14 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
792
Type
peptide
Locations
Detailed Description, Drawings, Summary

Declared organism:
Neisseria gonorrhoeae

Determined organism:
  • Neisseria gonorrhoeae

    Neisseria gonorrhoeae

    • Public DB hit
      GI:1766042
      AAC17600
    • Hit length
      792 aa
    • E Value
      0E0
    • BLAST Score
      1,628.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      AAC17600
      100% cov
    • Alignment Length
      792 aa
    • CIGAR string
      792M mismatches: 0 - insertions: 0 - deletions: 0
  • Neisseria gonorrhoeae FA6140

    Neisseria gonorrhoeae FA6140

    • Public DB hit
      GI:240017504
      ZP_04724044
      1 of 2 hits reported for Neisseria gonorrhoeae FA6140.
    • Hit length
      792 aa
    • E Value
      0E0
    • BLAST Score
      1,614.7 bits
    • Similarity
      99.49%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      ZP_04724044
      100% cov
    • Alignment Length
      792 aa
    • CIGAR string
      81MN6M2N161MN515MN24M mismatches: 5 - insertions: 0 - deletions: 0
  • Neisseria gonorrhoeae NCCP11945

    Neisseria gonorrhoeae NCCP11945

    • Public DB hit
      GI:194099959
      YP_002003098
      1 of 2 hits reported for Neisseria gonorrhoeae NCCP11945.
    • Hit length
      792 aa
    • E Value
      0E0
    • BLAST Score
      1,614.7 bits
    • Similarity
      99.49%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      YP_002003098
      100% cov
    • Alignment Length
      792 aa
    • CIGAR string
      81MN6M2N677MN24M mismatches: 4 - insertions: 0 - deletions: 0
  • Neisseria gonorrhoeae PID18

    Neisseria gonorrhoeae PID18

    • Public DB hit
      GI:240116658
      ZP_04730720
    • Hit length
      792 aa
    • E Value
      0E0
    • BLAST Score
      1,612 bits
    • Similarity
      99.37%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      ZP_04730720
      100% cov
    • Alignment Length
      792 aa
  • Neisseria gonorrhoeae PID332

    Neisseria gonorrhoeae PID332

    • Public DB hit
      GI:240124417
      ZP_04737373
    • Hit length
      792 aa
    • E Value
      0E0
    • BLAST Score
      1,610.5 bits
    • Similarity
      99.37%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      ZP_04737373
      100% cov
    • Alignment Length
      792 aa
  • Neisseria gonorrhoeae FA 1090

    Neisseria gonorrhoeae FA 1090

    • Public DB hit
      GI:59802119
      YP_208831
    • Hit length
      792 aa
    • E Value
      0E0
    • BLAST Score
      1,609.7 bits
    • Similarity
      99.37%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      YP_208831
      100% cov
    • Alignment Length
      792 aa
  • Neisseria gonorrhoeae DGI18

    Neisseria gonorrhoeae DGI18

    • Public DB hit
      GI:240015055
      ZP_04721968
    • Hit length
      792 aa
    • E Value
      0E0
    • BLAST Score
      1,609 bits
    • Similarity
      99.37%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      ZP_04721968
      100% cov
    • Alignment Length
      792 aa
  • Neisseria gonorrhoeae SK-93-1035

    Neisseria gonorrhoeae SK-93-1035

    • Public DB hit
      GI:240129094
      ZP_04741755
    • Hit length
      792 aa
    • E Value
      0E0
    • BLAST Score
      1,605.9 bits
    • Similarity
      99.12%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      ZP_04741755
      100% cov
    • Alignment Length
      792 aa
  • Neisseria meningitidis

    Neisseria meningitidis

    • Public DB hit
      GI:2460281
      AAC17599
    • Hit length
      797 aa
    • E Value
      0E0
    • BLAST Score
      1,553.1 bits
    • Similarity
      97.11%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      AAC17599
      100% cov
    • Alignment Length
      797 aa
  • Neisseria meningitidis FAM18

    Neisseria meningitidis FAM18

    • Public DB hit
      GI:121634057
      YP_974302
    • Hit length
      797 aa
    • E Value
      0E0
    • BLAST Score
      1,552.3 bits
    • Similarity
      97.11%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      YP_974302
      100% cov
    • Alignment Length
      797 aa
  • Neisseria meningitidis MC58

    Neisseria meningitidis MC58

    • Public DB hit
      GI:15676109
      NP_273240
    • Hit length
      797 aa
    • E Value
      0E0
    • BLAST Score
      1,550.8 bits
    • Similarity
      96.99%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NP_273240
      100% cov
    • Alignment Length
      797 aa
  • Neisseria meningitidis WUE 2594

    Neisseria meningitidis WUE 2594

    • Public DB hit
      GI:319411332
      CBY91743
    • Hit length
      811 aa
    • E Value
      0E0
    • BLAST Score
      1,550.4 bits
    • Similarity
      96.86%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      CBY91743
      98.27% cov
    • Alignment Length
      797 aa
  • Neisseria meningitidis Z2491

    Neisseria meningitidis Z2491

    • Public DB hit
      GI:218767125
      YP_002341637
    • Hit length
      797 aa
    • E Value
      0E0
    • BLAST Score
      1,547.7 bits
    • Similarity
      96.99%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      YP_002341637
      100% cov
    • Alignment Length
      797 aa
  • Neisseria meningitidis alpha153

    Neisseria meningitidis alpha153

    • Public DB hit
      GI:254670402
      CBA05945
    • Hit length
      797 aa
    • E Value
      0E0
    • BLAST Score
      1,547.3 bits
    • Similarity
      96.99%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      CBA05945
      100% cov
    • Alignment Length
      797 aa
  • Neisseria meningitidis CU385

    Neisseria meningitidis CU385

    • Public DB hit
      GI:325141196
      EGC63696
    • Hit length
      797 aa
    • E Value
      0E0
    • BLAST Score
      1,545 bits
    • Similarity
      96.86%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      EGC63696
      100% cov
    • Alignment Length
      797 aa
Occurrence
37 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
3
Length
2,394
Type
nucleotide
Locations
Detailed Description

Declared organism:
Neisseria meningitidis

Determined organism:
  • Neisseria meningitidis

    Neisseria meningitidis

    • Public DB hit
      GI:2460280
      AF021245
    • Hit length
      2,394 bp
    • E Value
      0E0
    • BLAST Score
      4,422 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      AF021245
      100% cov
    • Alignment Length
      2,394 bp
    • CIGAR string
      2394M mismatches: 0 - insertions: 0 - deletions: 0
  • Neisseria meningitidis FAM18

    Neisseria meningitidis FAM18

    • Public DB hit
      GI:120865607
      AM421808
    • Hit length
      2,194,961 bp
    • E Value
      0E0
    • BLAST Score
      4,416.5 bits
    • Similarity
      99.96%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      AM421808
      0.11% cov
    • Alignment Length
      2,394 bp
    • CIGAR string
      2318MN75M mismatches: 1 - insertions: 0 - deletions: 0
  • Neisseria meningitidis Z2491

    Neisseria meningitidis Z2491

    • Public DB hit
      GI:30407145
      AL157959
    • Hit length
      2,184,406 bp
    • E Value
      0E0
    • BLAST Score
      4,372.1 bits
    • Similarity
      99.62%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      AL157959
      0.11% cov
    • Alignment Length
      2,394 bp
    • CIGAR string
      33MNMN21MN28MN29MN35MN560MN1379MN224MN75M mismatches: 9 - insertions: 0 - deletions: 0
  • Neisseria meningitidis NZ-05/33

    Neisseria meningitidis NZ-05/33

    • Public DB hit
      GI:325207054
      CP002424
    • Hit length
      2,248,966 bp
    • E Value
      0E0
    • BLAST Score
      4,350 bits
    • Similarity
      99.46%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      CP002424
      0.11% cov
    • Alignment Length
      2,394 bp
  • Neisseria meningitidis M01-240149

    Neisseria meningitidis M01-240149

    • Public DB hit
      GI:325201197
      CP002421
    • Hit length
      2,223,518 bp
    • E Value
      0E0
    • BLAST Score
      4,350 bits
    • Similarity
      99.46%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      CP002421
      0.11% cov
    • Alignment Length
      2,394 bp
  • Neisseria meningitidis alpha710

    Neisseria meningitidis alpha710

    • Public DB hit
      GI:308388224
      CP001561
    • Hit length
      2,242,947 bp
    • E Value
      0E0
    • BLAST Score
      4,350 bits
    • Similarity
      99.46%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      CP001561
      0.11% cov
    • Alignment Length
      2,394 bp
  • Neisseria meningitidis WUE 2594

    Neisseria meningitidis WUE 2594

    • Public DB hit
      GI:319409534
      FR774048
    • Hit length
      2,227,255 bp
    • E Value
      0E0
    • BLAST Score
      4,311.2 bits
    • Similarity
      99.16%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      FR774048
      0.11% cov
    • Alignment Length
      2,394 bp
  • Neisseria meningitidis M04-240196

    Neisseria meningitidis M04-240196

    • Public DB hit
      GI:325205106
      CP002423
    • Hit length
      2,250,449 bp
    • E Value
      0E0
    • BLAST Score
      4,283.5 bits
    • Similarity
      98.96%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      CP002423
      0.11% cov
    • Alignment Length
      2,395 bp
  • Neisseria meningitidis M01-240355

    Neisseria meningitidis M01-240355

    • Public DB hit
      GI:325203134
      CP002422
    • Hit length
      2,287,777 bp
    • E Value
      0E0
    • BLAST Score
      4,283.5 bits
    • Similarity
      98.96%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      CP002422
      0.1% cov
    • Alignment Length
      2,395 bp
  • Neisseria meningitidis 8013

    Neisseria meningitidis 8013

    • Public DB hit
      GI:261391559
      FM999788
    • Hit length
      2,277,550 bp
    • E Value
      0E0
    • BLAST Score
      4,261.3 bits
    • Similarity
      98.79%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      FM999788
      0.11% cov
    • Alignment Length
      2,396 bp
  • Neisseria meningitidis alpha14

    Neisseria meningitidis alpha14

    • Public DB hit
      GI:254667570
      AM889136
    • Hit length
      2,145,295 bp
    • E Value
      0E0
    • BLAST Score
      4,205.9 bits
    • Similarity
      98.37%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      AM889136
      0.11% cov
    • Alignment Length
      2,396 bp
  • Neisseria meningitidis G2136

    Neisseria meningitidis G2136

    • Public DB hit
      GI:325197306
      CP002419
    • Hit length
      2,184,862 bp
    • E Value
      0E0
    • BLAST Score
      4,194.9 bits
    • Similarity
      98.29%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      CP002419
      0.11% cov
    • Alignment Length
      2,396 bp
  • Neisseria meningitidis H44/76

    Neisseria meningitidis H44/76

    • Public DB hit
      GI:325199235
      CP002420
    • Hit length
      2,240,883 bp
    • E Value
      0E0
    • BLAST Score
      4,183.8 bits
    • Similarity
      98.2%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      CP002420
      0.11% cov
    • Alignment Length
      2,395 bp
  • Neisseria meningitidis MC58

    Neisseria meningitidis MC58

    • Public DB hit
      GI:66731897
      AE002098
    • Hit length
      2,272,360 bp
    • E Value
      0E0
    • BLAST Score
      4,183.8 bits
    • Similarity
      98.2%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      AE002098
      0.11% cov
    • Alignment Length
      2,395 bp
  • Neisseria meningitidis 053442

    Neisseria meningitidis 053442

    • Public DB hit
      GI:161594571
      CP000381
    • Hit length
      2,153,416 bp
    • E Value
      0E0
    • BLAST Score
      4,167.2 bits
    • Similarity
      98.08%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      CP000381
      0.11% cov
    • Alignment Length
      2,396 bp
  • Neisseria gonorrhoeae FA 1090

    Neisseria gonorrhoeae FA 1090

    • Public DB hit
      GI:59717368
      AE004969
    • Hit length
      2,153,922 bp
    • E Value
      0E0
    • BLAST Score
      3,797.8 bits
    • Similarity
      95.42%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      AE004969
      0.11% cov
    • Alignment Length
      2,400 bp
  • Neisseria gonorrhoeae TCDC-NG08107

    Neisseria gonorrhoeae TCDC-NG08107

    • Public DB hit
      GI:317163438
      CP002440
    • Hit length
      2,154,835 bp
    • E Value
      0E0
    • BLAST Score
      3,781.2 bits
    • Similarity
      95.29%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      CP002440
      0.11% cov
    • Alignment Length
      2,401 bp
  • Neisseria gonorrhoeae NCCP11945

    Neisseria gonorrhoeae NCCP11945

    • Public DB hit
      GI:193932879
      CP001050
    • Hit length
      2,232,025 bp
    • E Value
      0E0
    • BLAST Score
      3,781.2 bits
    • Similarity
      95.29%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      CP001050
      0.11% cov
    • Alignment Length
      2,401 bp
  • Neisseria gonorrhoeae

    Neisseria gonorrhoeae

    • Public DB hit
      GI:1766041
      U81959
    • Hit length
      2,379 bp
    • E Value
      0E0
    • BLAST Score
      3,753.5 bits
    • Similarity
      95.09%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      U81959
      100% cov
    • Alignment Length
      2,401 bp
  • Neisseria lactamica 020-06

    Neisseria lactamica 020-06

    • Public DB hit
      GI:313004821
      FN995097
    • Hit length
      2,220,606 bp
    • E Value
      0E0
    • BLAST Score
      3,040.7 bits
    • Similarity
      91.66%
    • Coverage
      91.81%
    • Alignment (schematic)

      SEQ ID NO 3
      91.81% cov
      FN995097
      0.1% cov
    • Alignment Length
      2,205 bp
Occurrence
9 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
4
Length
797
Type
peptide
Locations
Claims, Detailed Description, Drawings, Summary

Declared organism:
Neisseria meningitidis

Determined organism:
  • Neisseria meningitidis

    Neisseria meningitidis

    • Public DB hit
      GI:2460281
      AAC17599
    • Hit length
      797 aa
    • E Value
      0E0
    • BLAST Score
      1,637.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      AAC17599
      100% cov
    • Alignment Length
      797 aa
    • CIGAR string
      797M mismatches: 0 - insertions: 0 - deletions: 0
  • Neisseria meningitidis FAM18

    Neisseria meningitidis FAM18

    • Public DB hit
      GI:121634057
      YP_974302
    • Hit length
      797 aa
    • E Value
      0E0
    • BLAST Score
      1,634.8 bits
    • Similarity
      99.87%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      YP_974302
      100% cov
    • Alignment Length
      797 aa
    • CIGAR string
      772MN24M mismatches: 1 - insertions: 0 - deletions: 0
  • Neisseria meningitidis WUE 2594

    Neisseria meningitidis WUE 2594

    • Public DB hit
      GI:319411332
      CBY91743
    • Hit length
      811 aa
    • E Value
      0E0
    • BLAST Score
      1,633.2 bits
    • Similarity
      99.62%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      CBY91743
      98.27% cov
    • Alignment Length
      797 aa
    • CIGAR string
      302MN3MN465MN24M mismatches: 3 - insertions: 0 - deletions: 0
  • Neisseria meningitidis MC58

    Neisseria meningitidis MC58

    • Public DB hit
      GI:15676109
      NP_273240
    • Hit length
      797 aa
    • E Value
      0E0
    • BLAST Score
      1,632.8 bits
    • Similarity
      99.75%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NP_273240
      100% cov
    • Alignment Length
      797 aa
  • Neisseria meningitidis Z2491

    Neisseria meningitidis Z2491

    • Public DB hit
      GI:218767125
      YP_002341637
    • Hit length
      797 aa
    • E Value
      0E0
    • BLAST Score
      1,630.9 bits
    • Similarity
      99.75%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      YP_002341637
      100% cov
    • Alignment Length
      797 aa
  • Neisseria meningitidis alpha153

    Neisseria meningitidis alpha153

    • Public DB hit
      GI:254670402
      CBA05945
    • Hit length
      797 aa
    • E Value
      0E0
    • BLAST Score
      1,630.5 bits
    • Similarity
      99.75%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      CBA05945
      100% cov
    • Alignment Length
      797 aa
  • Neisseria meningitidis alpha710

    Neisseria meningitidis alpha710

    • Public DB hit
      GI:308388400
      ADO30720
    • Hit length
      797 aa
    • E Value
      0E0
    • BLAST Score
      1,628.6 bits
    • Similarity
      99.62%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      ADO30720
      100% cov
    • Alignment Length
      797 aa
  • Neisseria meningitidis CU385

    Neisseria meningitidis CU385

    • Public DB hit
      GI:325141196
      EGC63696
    • Hit length
      797 aa
    • E Value
      0E0
    • BLAST Score
      1,627.8 bits
    • Similarity
      99.62%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      EGC63696
      100% cov
    • Alignment Length
      797 aa
  • Neisseria meningitidis ATCC 13091

    Neisseria meningitidis ATCC 13091

    • Public DB hit
      GI:304388986
      ZP_07371033
    • Hit length
      797 aa
    • E Value
      0E0
    • BLAST Score
      1,625.5 bits
    • Similarity
      99.5%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      ZP_07371033
      100% cov
    • Alignment Length
      797 aa
  • Neisseria meningitidis N1568

    Neisseria meningitidis N1568

    • Public DB hit
      GI:325129101
      EGC51950
    • Hit length
      797 aa
    • E Value
      0E0
    • BLAST Score
      1,625.1 bits
    • Similarity
      99.5%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      EGC51950
      100% cov
    • Alignment Length
      797 aa
  • Neisseria meningitidis M6190

    Neisseria meningitidis M6190

    • Public DB hit
      GI:325133096
      EGC55768
    • Hit length
      797 aa
    • E Value
      0E0
    • BLAST Score
      1,623.6 bits
    • Similarity
      99.37%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      EGC55768
      100% cov
    • Alignment Length
      797 aa
  • Neisseria meningitidis 8013

    Neisseria meningitidis 8013

    • Public DB hit
      GI:261391718
      CAX49167
    • Hit length
      797 aa
    • E Value
      0E0
    • BLAST Score
      1,623.6 bits
    • Similarity
      99.5%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      CAX49167
      100% cov
    • Alignment Length
      797 aa
  • Neisseria meningitidis 961-5945

    Neisseria meningitidis 961-5945

    • Public DB hit
      GI:325143196
      EGC65536
    • Hit length
      797 aa
    • E Value
      0E0
    • BLAST Score
      1,621.7 bits
    • Similarity
      99.37%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      EGC65536
      100% cov
    • Alignment Length
      797 aa
  • Neisseria meningitidis alpha14

    Neisseria meningitidis alpha14

    • Public DB hit
      GI:254805774
      YP_003083995
    • Hit length
      797 aa
    • E Value
      0E0
    • BLAST Score
      1,620.1 bits
    • Similarity
      99.37%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      YP_003083995
      100% cov
    • Alignment Length
      797 aa
  • Neisseria meningitidis 053442

    Neisseria meningitidis 053442

    • Public DB hit
      GI:161870881
      YP_001600055
    • Hit length
      797 aa
    • E Value
      0E0
    • BLAST Score
      1,609.3 bits
    • Similarity
      98.87%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      YP_001600055
      100% cov
    • Alignment Length
      797 aa
  • Neisseria gonorrhoeae SK-93-1035

    Neisseria gonorrhoeae SK-93-1035

    • Public DB hit
      GI:240129094
      ZP_04741755
      1 of 2 hits reported for Neisseria gonorrhoeae SK-93-1035.
    • Hit length
      792 aa
    • E Value
      0E0
    • BLAST Score
      1,567 bits
    • Similarity
      97.62%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      ZP_04741755
      100% cov
    • Alignment Length
      797 aa
  • Neisseria gonorrhoeae DGI18

    Neisseria gonorrhoeae DGI18

    • Public DB hit
      GI:240015055
      ZP_04721968
      1 of 2 hits reported for Neisseria gonorrhoeae DGI18.
    • Hit length
      792 aa
    • E Value
      0E0
    • BLAST Score
      1,567 bits
    • Similarity
      97.62%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      ZP_04721968
      100% cov
    • Alignment Length
      797 aa
Occurrence
12 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
5
Length
23
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
Occurrence
9 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
6
Length
18
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Coccidioides immitis RS

    Coccidioides immitis RS

    • Public DB hit
      GI:119193673
      XM_001247442
      1 of 2 hits reported for Coccidioides immitis RS.
    • Hit length
      4,047 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_001247442
      0.44% cov
    • Alignment Length
      18 bp
    • CIGAR string
      18M mismatches: 0 - insertions: 0 - deletions: 0
  • Neisseria meningitidis NZ-05/33

    Neisseria meningitidis NZ-05/33

    • Public DB hit
      GI:325207054
      CP002424
    • Hit length
      2,248,966 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      CP002424
      0% cov
    • Alignment Length
      18 bp
    • CIGAR string
      18M mismatches: 0 - insertions: 0 - deletions: 0
  • Neisseria meningitidis M04-240196

    Neisseria meningitidis M04-240196

    • Public DB hit
      GI:325205106
      CP002423
    • Hit length
      2,250,449 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      CP002423
      0% cov
    • Alignment Length
      18 bp
    • CIGAR string
      18M mismatches: 0 - insertions: 0 - deletions: 0
  • Neisseria meningitidis M01-240355

    Neisseria meningitidis M01-240355

    • Public DB hit
      GI:325203134
      CP002422
    • Hit length
      2,287,777 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      CP002422
      0% cov
    • Alignment Length
      18 bp
  • Neisseria meningitidis M01-240149

    Neisseria meningitidis M01-240149

    • Public DB hit
      GI:325201197
      CP002421
    • Hit length
      2,223,518 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      CP002421
      0% cov
    • Alignment Length
      18 bp
  • Neisseria meningitidis H44/76

    Neisseria meningitidis H44/76

    • Public DB hit
      GI:325199235
      CP002420
    • Hit length
      2,240,883 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      CP002420
      0% cov
    • Alignment Length
      18 bp
  • Neisseria meningitidis G2136

    Neisseria meningitidis G2136

    • Public DB hit
      GI:325197306
      CP002419
    • Hit length
      2,184,862 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      CP002419
      0% cov
    • Alignment Length
      18 bp
  • Neisseria meningitidis WUE 2594

    Neisseria meningitidis WUE 2594

    • Public DB hit
      GI:319409534
      FR774048
    • Hit length
      2,227,255 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      FR774048
      0% cov
    • Alignment Length
      18 bp
  • Neisseria gonorrhoeae TCDC-NG08107

    Neisseria gonorrhoeae TCDC-NG08107

    • Public DB hit
      GI:317163438
      CP002440
    • Hit length
      2,154,835 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      CP002440
      0% cov
    • Alignment Length
      18 bp
  • Neisseria lactamica 020-06

    Neisseria lactamica 020-06

    • Public DB hit
      GI:313004821
      FN995097
    • Hit length
      2,220,606 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      FN995097
      0% cov
    • Alignment Length
      18 bp
  • Neisseria meningitidis alpha710

    Neisseria meningitidis alpha710

    • Public DB hit
      GI:308388224
      CP001561
    • Hit length
      2,242,947 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      CP001561
      0% cov
    • Alignment Length
      18 bp
  • Sulfurimonas autotrophica DSM 16294

    Sulfurimonas autotrophica DSM 16294

    • Public DB hit
      GI:306978014
      CP002205
    • Hit length
      2,153,198 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      CP002205
      0% cov
    • Alignment Length
      18 bp
  • Neisseria meningitidis 8013

    Neisseria meningitidis 8013

    • Public DB hit
      GI:261391559
      FM999788
    • Hit length
      2,277,550 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      FM999788
      0% cov
    • Alignment Length
      18 bp
  • Neisseria meningitidis alpha14

    Neisseria meningitidis alpha14

    • Public DB hit
      GI:254667570
      AM889136
    • Hit length
      2,145,295 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      AM889136
      0% cov
    • Alignment Length
      18 bp
  • Neisseria gonorrhoeae NCCP11945

    Neisseria gonorrhoeae NCCP11945

    • Public DB hit
      GI:193932879
      CP001050
    • Hit length
      2,232,025 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      CP001050
      0% cov
    • Alignment Length
      18 bp
  • Neisseria meningitidis 053442

    Neisseria meningitidis 053442

    • Public DB hit
      GI:161594571
      CP000381
    • Hit length
      2,153,416 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      CP000381
      0% cov
    • Alignment Length
      18 bp
  • Neisseria meningitidis Z2491

    Neisseria meningitidis Z2491

    • Public DB hit
      GI:30407145
      AL157959
    • Hit length
      2,184,406 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      AL157959
      0% cov
    • Alignment Length
      18 bp
  • Neisseria meningitidis FAM18

    Neisseria meningitidis FAM18

    • Public DB hit
      GI:120865607
      AM421808
    • Hit length
      2,194,961 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      AM421808
      0% cov
    • Alignment Length
      18 bp
  • Neisseria meningitidis MC58

    Neisseria meningitidis MC58

    • Public DB hit
      GI:66731897
      AE002098
    • Hit length
      2,272,360 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      AE002098
      0% cov
    • Alignment Length
      18 bp
  • Neisseria gonorrhoeae FA 1090

    Neisseria gonorrhoeae FA 1090

    • Public DB hit
      GI:59717368
      AE004969
    • Hit length
      2,153,922 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      AE004969
      0% cov
    • Alignment Length
      18 bp
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:297139724
      NG_021363
      1 of 3 hits reported for Homo sapiens.
    • Hit length
      136,662 bp
    • E Value
      4.14E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      94.44%
    • Alignment (schematic)

      SEQ ID NO 6
      94.44% cov
      NG_021363
      0.01% cov
    • Alignment Length
      17 bp
  • Caenorhabditis briggsae

    Caenorhabditis briggsae

    • Public DB hit
      GI:268565174
      XM_002639313
    • Hit length
      1,194 bp
    • E Value
      4.14E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      94.44%
    • Alignment (schematic)

      SEQ ID NO 6
      94.44% cov
      XM_002639313
      1.42% cov
    • Alignment Length
      17 bp
Occurrence
9 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
7
Length
59
Type
nucleotide
Locations
Drawings

Declared organism:
Neisseria gonorrhoeae

Determined organism:
  • Neisseria gonorrhoeae TCDC-NG08107

    Neisseria gonorrhoeae TCDC-NG08107

    • Public DB hit
      GI:317163438
      CP002440
    • Hit length
      2,154,835 bp
    • E Value
      8.89E-22
    • BLAST Score
      110.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      CP002440
      0% cov
    • Alignment Length
      59 bp
    • CIGAR string
      59M mismatches: 0 - insertions: 0 - deletions: 0
  • Neisseria gonorrhoeae NCCP11945

    Neisseria gonorrhoeae NCCP11945

    • Public DB hit
      GI:193932879
      CP001050
    • Hit length
      2,232,025 bp
    • E Value
      8.89E-22
    • BLAST Score
      110.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      CP001050
      0% cov
    • Alignment Length
      59 bp
    • CIGAR string
      59M mismatches: 0 - insertions: 0 - deletions: 0
  • Neisseria gonorrhoeae FA 1090

    Neisseria gonorrhoeae FA 1090

    • Public DB hit
      GI:59717368
      AE004969
    • Hit length
      2,153,922 bp
    • E Value
      8.89E-22
    • BLAST Score
      110.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      AE004969
      0% cov
    • Alignment Length
      59 bp
    • CIGAR string
      59M mismatches: 0 - insertions: 0 - deletions: 0
  • Neisseria lactamica 020-06

    Neisseria lactamica 020-06

    • Public DB hit
      GI:313004821
      FN995097
    • Hit length
      2,220,606 bp
    • E Value
      4.14E-20
    • BLAST Score
      104.5 bits
    • Similarity
      98.31%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      FN995097
      0% cov
    • Alignment Length
      59 bp
  • Neisseria meningitidis FAM18

    Neisseria meningitidis FAM18

    • Public DB hit
      GI:120865607
      AM421808
    • Hit length
      2,194,961 bp
    • E Value
      4.14E-20
    • BLAST Score
      104.5 bits
    • Similarity
      98.31%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      AM421808
      0% cov
    • Alignment Length
      59 bp
  • Neisseria meningitidis NZ-05/33

    Neisseria meningitidis NZ-05/33

    • Public DB hit
      GI:325207054
      CP002424
    • Hit length
      2,248,966 bp
    • E Value
      6.92E-18
    • BLAST Score
      97.1 bits
    • Similarity
      98.18%
    • Coverage
      93.22%
    • Alignment (schematic)

      SEQ ID NO 7
      93.22% cov
      CP002424
      0% cov
    • Alignment Length
      55 bp
  • Neisseria meningitidis M04-240196

    Neisseria meningitidis M04-240196

    • Public DB hit
      GI:325205106
      CP002423
    • Hit length
      2,250,449 bp
    • E Value
      6.92E-18
    • BLAST Score
      97.1 bits
    • Similarity
      98.18%
    • Coverage
      93.22%
    • Alignment (schematic)

      SEQ ID NO 7
      93.22% cov
      CP002423
      0% cov
    • Alignment Length
      55 bp
  • Neisseria meningitidis M01-240355

    Neisseria meningitidis M01-240355

    • Public DB hit
      GI:325203134
      CP002422
    • Hit length
      2,287,777 bp
    • E Value
      6.92E-18
    • BLAST Score
      97.1 bits
    • Similarity
      98.18%
    • Coverage
      93.22%
    • Alignment (schematic)

      SEQ ID NO 7
      93.22% cov
      CP002422
      0% cov
    • Alignment Length
      55 bp
  • Neisseria meningitidis M01-240149

    Neisseria meningitidis M01-240149

    • Public DB hit
      GI:325201197
      CP002421
    • Hit length
      2,223,518 bp
    • E Value
      6.92E-18
    • BLAST Score
      97.1 bits
    • Similarity
      98.18%
    • Coverage
      93.22%
    • Alignment (schematic)

      SEQ ID NO 7
      93.22% cov
      CP002421
      0% cov
    • Alignment Length
      55 bp
  • Neisseria meningitidis H44/76

    Neisseria meningitidis H44/76

    • Public DB hit
      GI:325199235
      CP002420
    • Hit length
      2,240,883 bp
    • E Value
      6.92E-18
    • BLAST Score
      97.1 bits
    • Similarity
      98.18%
    • Coverage
      93.22%
    • Alignment (schematic)

      SEQ ID NO 7
      93.22% cov
      CP002420
      0% cov
    • Alignment Length
      55 bp
  • Neisseria meningitidis G2136

    Neisseria meningitidis G2136

    • Public DB hit
      GI:325197306
      CP002419
    • Hit length
      2,184,862 bp
    • E Value
      6.92E-18
    • BLAST Score
      97.1 bits
    • Similarity
      98.18%
    • Coverage
      93.22%
    • Alignment (schematic)

      SEQ ID NO 7
      93.22% cov
      CP002419
      0% cov
    • Alignment Length
      55 bp
  • Neisseria meningitidis alpha710

    Neisseria meningitidis alpha710

    • Public DB hit
      GI:308388224
      CP001561
    • Hit length
      2,242,947 bp
    • E Value
      6.92E-18
    • BLAST Score
      97.1 bits
    • Similarity
      98.18%
    • Coverage
      93.22%
    • Alignment (schematic)

      SEQ ID NO 7
      93.22% cov
      CP001561
      0% cov
    • Alignment Length
      55 bp
  • Neisseria meningitidis 8013

    Neisseria meningitidis 8013

    • Public DB hit
      GI:261391559
      FM999788
    • Hit length
      2,277,550 bp
    • E Value
      6.92E-18
    • BLAST Score
      97.1 bits
    • Similarity
      98.18%
    • Coverage
      93.22%
    • Alignment (schematic)

      SEQ ID NO 7
      93.22% cov
      FM999788
      0% cov
    • Alignment Length
      55 bp
  • Neisseria meningitidis alpha14

    Neisseria meningitidis alpha14

    • Public DB hit
      GI:254667570
      AM889136
    • Hit length
      2,145,295 bp
    • E Value
      6.92E-18
    • BLAST Score
      97.1 bits
    • Similarity
      98.18%
    • Coverage
      93.22%
    • Alignment (schematic)

      SEQ ID NO 7
      93.22% cov
      AM889136
      0% cov
    • Alignment Length
      55 bp
  • Neisseria meningitidis Z2491

    Neisseria meningitidis Z2491

    • Public DB hit
      GI:30407145
      AL157959
    • Hit length
      2,184,406 bp
    • E Value
      6.92E-18
    • BLAST Score
      97.1 bits
    • Similarity
      98.18%
    • Coverage
      93.22%
    • Alignment (schematic)

      SEQ ID NO 7
      93.22% cov
      AL157959
      0% cov
    • Alignment Length
      55 bp
  • Neisseria meningitidis MC58

    Neisseria meningitidis MC58

    • Public DB hit
      GI:66731897
      AE002098
    • Hit length
      2,272,360 bp
    • E Value
      6.92E-18
    • BLAST Score
      97.1 bits
    • Similarity
      98.18%
    • Coverage
      93.22%
    • Alignment (schematic)

      SEQ ID NO 7
      93.22% cov
      AE002098
      0% cov
    • Alignment Length
      55 bp
Occurrence
9 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
8
Length
67
Type
nucleotide
Locations
Drawings

Declared organism:
Neisseria gonorrhoeae

Determined organism:
  • Neisseria gonorrhoeae TCDC-NG08107

    Neisseria gonorrhoeae TCDC-NG08107

    • Public DB hit
      GI:317163438
      CP002440
    • Hit length
      2,154,835 bp
    • E Value
      1.87E-24
    • BLAST Score
      119.3 bits
    • Similarity
      98.51%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      CP002440
      0% cov
    • Alignment Length
      67 bp
    • CIGAR string
      25MN41M mismatches: 1 - insertions: 0 - deletions: 0
  • Neisseria gonorrhoeae NCCP11945

    Neisseria gonorrhoeae NCCP11945

    • Public DB hit
      GI:193932879
      CP001050
    • Hit length
      2,232,025 bp
    • E Value
      1.87E-24
    • BLAST Score
      119.3 bits
    • Similarity
      98.51%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      CP001050
      0% cov
    • Alignment Length
      67 bp
    • CIGAR string
      25MN41M mismatches: 1 - insertions: 0 - deletions: 0
  • Neisseria gonorrhoeae FA 1090

    Neisseria gonorrhoeae FA 1090

    • Public DB hit
      GI:59717368
      AE004969
    • Hit length
      2,153,922 bp
    • E Value
      1.87E-24
    • BLAST Score
      119.3 bits
    • Similarity
      98.51%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      AE004969
      0% cov
    • Alignment Length
      67 bp
    • CIGAR string
      25MN41M mismatches: 1 - insertions: 0 - deletions: 0
  • Neisseria lactamica 020-06

    Neisseria lactamica 020-06

    • Public DB hit
      GI:313004821
      FN995097
    • Hit length
      2,220,606 bp
    • E Value
      6.78E-19
    • BLAST Score
      100.8 bits
    • Similarity
      94.03%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      FN995097
      0% cov
    • Alignment Length
      67 bp
Occurrence
9 times in PatSeqDB
Tools
PatSeq Finder

Filter Sequences

Clear

Sign in to the Lens

Forgot Password? Register New Account

Language Improvements

We have been busy updating our localisation and all existing languages.

Much of these translations have been done using machine translation with a check from a native speaker, however not all elements of the UI have been checked for each language. If you see a term that is not translated correctly or should be improved, please contact Support.

  Don't show again
Feedback